Planaria EST Database

DrC_01100

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01100
         (919 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9D964|GATM_MOUSE  Glycine amidinotransferase, mitochondr...   238   1e-62
sp|P50442|GATM_RAT  Glycine amidinotransferase, mitochondria...   238   2e-62
sp|P50441|GATM_PIG  Glycine amidinotransferase (L-arginine:g...   238   2e-62
sp|P50440|GATM_HUMAN  Glycine amidinotransferase, mitochondr...   235   1e-61
sp|P29780|STRB2_STRGR  Putative inosamine-phosphate amidinot...   121   2e-27
sp|Q54258|STRB1_STRGA  Inosamine-phosphate amidinotransferas...   119   9e-27
sp|P08078|STRB1_STRGR  Inosamine-phosphate amidinotransferas...   112   2e-24
sp|Q54264|STRB2_STRGA  Putative inosamine-phosphate amidinot...    69   1e-11
sp|P56079|CDSA_DROME  Phosphatidate cytidylyltransferase, ph...    34   0.66 
sp|Q9UQ07|MOK_HUMAN  MAPK/MAK/MRK overlapping kinase (MOK pr...    31   4.3  

>sp|Q9D964|GATM_MOUSE Glycine amidinotransferase, mitochondrial precursor
           (L-arginine:glycine amidinotransferase) (Transamidinase)
           (AT)
          Length = 423

 Score =  238 bits (608), Expect = 1e-62
 Identities = 128/270 (47%), Positives = 167/270 (61%), Gaps = 7/270 (2%)
 Frame = +3

Query: 129 PVWAWNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPEMW 308
           PV ++NEWDPLEEV+VG  +NA +P  + EV A       PF++K+GG  F +    +  
Sbjct: 65  PVSSYNEWDPLEEVIVGRAENACVPPFTVEVKANTYEKYWPFYQKNGGLYFPK----DHL 120

Query: 309 KKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEII 488
           KK   E+               +P+ ID+  ++ TP F STGLY+AMPRD ++VVG+EII
Sbjct: 121 KKAVAEVEEMCNILSMEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILMVVGNEII 180

Query: 489 ESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVS--QDKPYV-- 656
           E+PMAWR R+FEY AYR +I+ YF+ GA+WT+APK TM + LYD  + +   +D+  +  
Sbjct: 181 EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYDQNYPIHSVEDRHKLAA 240

Query: 657 ---YVTTELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSL 827
              +VTTE EPCFDAADF R GRDIF QRS VTN   I+W+RRHLAP   RVH I F   
Sbjct: 241 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAP-DYRVHIISFKDP 299

Query: 828 YSMHIDTNFFPVKPGLFLLKDGLNCRTPNL 917
             MHID  F  + PGL L      C   +L
Sbjct: 300 NPMHIDATFNIIGPGLVLSNPDRPCHQIDL 329

>sp|P50442|GATM_RAT Glycine amidinotransferase, mitochondrial precursor
           (L-arginine:glycine amidinotransferase) (Transamidinase)
           (AT)
          Length = 423

 Score =  238 bits (607), Expect = 2e-62
 Identities = 128/270 (47%), Positives = 167/270 (61%), Gaps = 7/270 (2%)
 Frame = +3

Query: 129 PVWAWNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPEMW 308
           PV ++NEWDPLEEV+VG  +NA +P  + EV A       PF++K+GG  F +    +  
Sbjct: 65  PVSSYNEWDPLEEVIVGRAENACVPPFTVEVKANTYEKYWPFYQKNGGLYFPK----DHL 120

Query: 309 KKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEII 488
           KK   E+               +P+ ID+  ++ TP F STGLY+AMPRD ++VVG+EII
Sbjct: 121 KKAVAEVEEMCNILSMEGVTVKRPDPIDWSLKYKTPDFESTGLYSAMPRDILMVVGNEII 180

Query: 489 ESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVS--QDKPYV-- 656
           E+PMAWR R+FEY AYR +I+ YF+ GA+WT+APK TM + LYD  + +   +D+  +  
Sbjct: 181 EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYDQDYPIHSVEDRHKLAA 240

Query: 657 ---YVTTELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSL 827
              +VTTE EPCFDAADF R GRDIF QRS VTN   I+W+RRHLAP   RVH I F   
Sbjct: 241 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAP-DYRVHIISFKDP 299

Query: 828 YSMHIDTNFFPVKPGLFLLKDGLNCRTPNL 917
             MHID  F  + PGL L      C   +L
Sbjct: 300 NPMHIDATFNIIGPGLVLSNPDRPCHQIDL 329

>sp|P50441|GATM_PIG Glycine amidinotransferase (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 386

 Score =  238 bits (606), Expect = 2e-62
 Identities = 128/270 (47%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
 Frame = +3

Query: 129 PVWAWNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPEMW 308
           PV ++NEWDPLEEV+VG  +NA +P  + EV A       PF++K+GG  F +    +  
Sbjct: 28  PVSSYNEWDPLEEVIVGRAENACVPPFTVEVKANTYEKYWPFYQKYGGHYFPK----DHL 83

Query: 309 KKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEII 488
           KK   EI               +P+ ID+  ++ TP F STGLY AMPRD ++VVG+EII
Sbjct: 84  KKAVAEIEEMCNILKMEGVTVRRPDPIDWSVKYKTPDFESTGLYGAMPRDILIVVGNEII 143

Query: 489 ESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDV--SQDKPYV-- 656
           E+PMAWR R+FEY AYR +I+ YF  GA+WT+APK TM + LYD  + +   +D+  +  
Sbjct: 144 EAPMAWRARFFEYRAYRSIIKDYFRRGAKWTTAPKPTMADELYDQDYPIYSVEDRHKLAA 203

Query: 657 ---YVTTELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSL 827
              +VTTE EPCFDAADF R GRDIF QRS VTN   I+W+R+HLAP   RVH I F   
Sbjct: 204 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYMGIEWMRKHLAP-DYRVHIISFKDP 262

Query: 828 YSMHIDTNFFPVKPGLFLLKDGLNCRTPNL 917
             MHID  F  + PGL L      C   +L
Sbjct: 263 NPMHIDATFNIIGPGLVLSNPDRPCHQIDL 292

>sp|P50440|GATM_HUMAN Glycine amidinotransferase, mitochondrial precursor
           (L-arginine:glycine amidinotransferase) (Transamidinase)
           (AT)
          Length = 423

 Score =  235 bits (600), Expect = 1e-61
 Identities = 127/270 (47%), Positives = 166/270 (61%), Gaps = 7/270 (2%)
 Frame = +3

Query: 129 PVWAWNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPEMW 308
           PV ++NEWDPLEEV+VG  +NA +P  + EV A       PF++K GG  F +    +  
Sbjct: 65  PVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPK----DHL 120

Query: 309 KKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEII 488
           KK   EI               +P+ ID+  ++ TP F STGLY+AMPRD ++VVG+EII
Sbjct: 121 KKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEII 180

Query: 489 ESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVS--QDKPYV-- 656
           E+PMAWR R+FEY AYR +I+ YF+ GA+WT+APK TM + LY+  + +   +D+  +  
Sbjct: 181 EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA 240

Query: 657 ---YVTTELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSL 827
              +VTTE EPCFDAADF R GRDIF QRS VTN   I+W+RRHLAP   RVH I F   
Sbjct: 241 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAP-DYRVHIISFKDP 299

Query: 828 YSMHIDTNFFPVKPGLFLLKDGLNCRTPNL 917
             MHID  F  + PG+ L      C   +L
Sbjct: 300 NPMHIDATFNIIGPGIVLSNPDRPCHQIDL 329

>sp|P29780|STRB2_STRGR Putative inosamine-phosphate amidinotransferase II (Aminocyclitol
           amidinotransferase) (ADT)
          Length = 349

 Score =  121 bits (304), Expect = 2e-27
 Identities = 93/258 (36%), Positives = 124/258 (48%), Gaps = 5/258 (1%)
 Frame = +3

Query: 126 SPVWAWNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEV-MGP- 299
           S V   NEWDPLEEVVVG         P + + A      + + E  G  ++ EV  GP 
Sbjct: 2   SLVGVHNEWDPLEEVVVGTARRPCAG-PDRSLLA------VEYAEYAGPGRWQEVPTGPY 54

Query: 300 --EMWKKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVV 473
                K+ EDE+               +P A D      TP + S G     PRD +LVV
Sbjct: 55  PDRALKETEDELEELCEELRGLGVTVRRPGARDSAAPVRTPDWESDGYGDLCPRDGLLVV 114

Query: 474 GDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVSQDKPY 653
           GD +IE+PMA R R+ E  AY+ L+ +Y   G+RW SAPK  + EG+Y      S   P 
Sbjct: 115 GDTVIEAPMALRARFLESLAYKELLVEYLAAGSRWISAPKPRLAEGMY------SPSGPS 168

Query: 654 VYVTTELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSLY- 830
                +LEP FDAA+  R+G D+    S   N+   +WL+  L      VH      LY 
Sbjct: 169 GERLRDLEPVFDAANVLRLGTDLLYLVSDSGNELGARWLQSALG-AAYTVHPCR--GLYS 225

Query: 831 SMHIDTNFFPVKPGLFLL 884
           S HID+   P++PGL L+
Sbjct: 226 STHIDSTLVPLRPGLVLV 243

>sp|Q54258|STRB1_STRGA Inosamine-phosphate amidinotransferase I (Aminocyclitol
           amidinotransferase) (ADT)
          Length = 348

 Score =  119 bits (299), Expect = 9e-27
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
 Frame = +3

Query: 144 NEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGP---EMWKK 314
           NEWDPLEE++VG    A +P   + V A      + + +++  +      GP    + K+
Sbjct: 8   NEWDPLEEIIVGTAVGARVPRADRSVFA------VEYADEYDSQD-QVPAGPYPDRVLKE 60

Query: 315 IEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEIIES 494
            E+E+               +P   D      TP + + G +   PRD +L VG  +IES
Sbjct: 61  TEEELHVLSEELTKLGVTVRRPGQRDNSALVATPDWQTDGFHDYCPRDGLLAVGQTVIES 120

Query: 495 PMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVSQDKPYVYVTTEL 674
           PMA R R+ E  AY+ ++ +YF  GARW SAPK  + + +Y+      Q        T+L
Sbjct: 121 PMALRARFLESLAYKDILLEYFASGARWLSAPKPRLADEMYEPTAPAGQR------LTDL 174

Query: 675 EPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSLY-SMHIDTN 851
           EP FDAA+  R G D+    S   N+   +WL+  L     +VH      LY S H+D+ 
Sbjct: 175 EPVFDAANVLRFGTDLLYLVSDSGNELGAKWLQSALGST-YKVHPCR--GLYASTHVDST 231

Query: 852 FFPVKPGLFLL 884
             P++PGL L+
Sbjct: 232 IVPLRPGLVLV 242

>sp|P08078|STRB1_STRGR Inosamine-phosphate amidinotransferase I (Aminocyclitol
           amidinotransferase) (ADT)
          Length = 347

 Score =  112 bits (279), Expect = 2e-24
 Identities = 81/253 (32%), Positives = 117/253 (46%), Gaps = 7/253 (2%)
 Frame = +3

Query: 144 NEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPE------M 305
           NEWDPLEEV+VG    A +P   + V A           ++ G   S+   P       +
Sbjct: 8   NEWDPLEEVIVGTAVGARVPTADRSVFAV----------EYAGDYESQEQIPSGAYPDRV 57

Query: 306 WKKIEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEI 485
            K+ E+E+               +P   D+     TP + + G +   PRD +L VG  I
Sbjct: 58  LKETEEELHVLAAELTKLGVTVRRPGPRDHSALIKTPDWETDGFHDYCPRDGLLSVGQTI 117

Query: 486 IESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVSQDKPYVYVT 665
           IE+PMA R R+ E  AY+ L+ +YF  G+RW SAPK  + +  Y      +   P     
Sbjct: 118 IETPMALRSRFLESLAYKDLLLEYFASGSRWLSAPKPRLTDDSY------APQAPAGERL 171

Query: 666 TELEPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSLY-SMHI 842
           T+ EP FDAA+  R G D+    S   N+   +WL+  +      VH      LY S H+
Sbjct: 172 TDEEPVFDAANVLRFGTDLLYLVSDSGNELGAKWLQSAVGDT-YTVHPCR--KLYASTHV 228

Query: 843 DTNFFPVKPGLFL 881
           D+   P++PGL L
Sbjct: 229 DSTIVPLRPGLVL 241

>sp|Q54264|STRB2_STRGA Putative inosamine-phosphate amidinotransferase II (Aminocyclitol
           amidinotransferase) (ADT)
          Length = 319

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 67/250 (26%), Positives = 93/250 (37%), Gaps = 2/250 (0%)
 Frame = +3

Query: 141 WNEWDPLEEVVVGVPDNATLPYPSQEVAATFGPPRLPFFEKHGGKKFSEVMGPE--MWKK 314
           + EWDPLEE+VVG                                     +G E  M ++
Sbjct: 7   YTEWDPLEEIVVGT-----------------------------------AVGSENRMVRE 31

Query: 315 IEDEIXXXXXXXXXXXXXXXQPEAIDYDHQWTTPKFSSTGLYAAMPRDFMLVVGDEIIES 494
            EDE+               +    D       P   +    A  PRD +L VG+ +I++
Sbjct: 32  TEDELDGLCEELRGLGVTVRRLPPQDPASPPAPPDRGADTALAYRPRDGLLTVGETVIQT 91

Query: 495 PMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYDMKFDVSQDKPYVYVTTEL 674
           P        +  A R L+ +YF  G+RW SAP   + + +YD         P      EL
Sbjct: 92  PAVPGLPSLQSPACRMLLMEYFTSGSRWISAPPPVLTDVMYD------PTAPAGERLREL 145

Query: 675 EPCFDAADFTRVGRDIFGQRSHVTNKKAIQWLRRHLAPRGIRVHDIEFDSLYSMHIDTNF 854
           EP FDA    R+G D+    S   N    +WL+  L  R   VH        S H D   
Sbjct: 146 EPVFDADTVLRIGTDLLYLVSDSGNALGARWLQAALGER-YTVHPCR-GPHGSPHGDFAV 203

Query: 855 FPVKPGLFLL 884
            P+ PGL L+
Sbjct: 204 VPLGPGLILV 213

>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
           (CDP-diglyceride synthetase) (CDP-diglyceride
           pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)
           (CTP:phosphatidate cytidylyltransferase) (CDP-DAG
           synthase) (CDP-DG synthetase)
          Length = 447

 Score = 33.9 bits (76), Expect = 0.66
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -1

Query: 646 LSW---LTSNFISYKPSSIVHFGAEVHRAPSLKYFLINGRYASYSKYL 512
           LSW   LTSN+  Y  + + +FG  ++R   LK+ +   R+ S++ Y+
Sbjct: 142 LSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYI 189

>sp|Q9UQ07|MOK_HUMAN MAPK/MAK/MRK overlapping kinase (MOK protein kinase) (Renal tumor
           antigen 1) (RAGE-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +3

Query: 573 RWTSAPKCTMEEGLYDMKFDVSQDKPYVYVTTELEPCF 686
           RW  AP+C + +G Y  K D+       Y    L+P F
Sbjct: 165 RWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLF 202

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,324,603
Number of Sequences: 369166
Number of extensions: 2312466
Number of successful extensions: 5287
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5264
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9366655350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01100

  1. Dr_sW_027_B20
  2. Dr_sW_027_L16
  3. Dr_sW_025_D06