Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_B20
(353 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9D964|GATM_MOUSE Glycine amidinotransferase, mitochondr... 152 3e-37
sp|P50442|GATM_RAT Glycine amidinotransferase, mitochondria... 151 4e-37
sp|P50441|GATM_PIG Glycine amidinotransferase (L-arginine:g... 150 7e-37
sp|P50440|GATM_HUMAN Glycine amidinotransferase, mitochondr... 149 1e-36
sp|P29780|STRB2_STRGR Putative inosamine-phosphate amidinot... 84 1e-16
sp|Q54258|STRB1_STRGA Inosamine-phosphate amidinotransferas... 83 2e-16
sp|P08078|STRB1_STRGR Inosamine-phosphate amidinotransferas... 76 3e-14
sp|Q54264|STRB2_STRGA Putative inosamine-phosphate amidinot... 57 1e-08
sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, ph... 34 0.12
sp|Q9UQ07|MOK_HUMAN MAPK/MAK/MRK overlapping kinase (MOK pr... 31 0.77
>sp|Q9D964|GATM_MOUSE Glycine amidinotransferase, mitochondrial precursor
(L-arginine:glycine amidinotransferase) (Transamidinase)
(AT)
Length = 423
Score = 152 bits (383), Expect = 3e-37
Identities = 72/122 (59%), Positives = 92/122 (75%), Gaps = 7/122 (5%)
Frame = +3
Query: 9 QWTTPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWT 188
++ TP F STGLY+AMPRD ++VVG+EIIE+PMAWR R+FEY AYR +I+ YF+ GA+WT
Sbjct: 152 KYKTPDFESTGLYSAMPRDILMVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWT 211
Query: 189 SAPKCTMEEGLYDMKFDVS--QDKPYV-----YVTTELEPCFDAADFTRVGRDIFGQRSH 347
+APK TM + LYD + + +D+ + +VTTE EPCFDAADF R GRDIF QRS
Sbjct: 212 TAPKPTMADELYDQNYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQ 271
Query: 348 VT 353
VT
Sbjct: 272 VT 273
>sp|P50442|GATM_RAT Glycine amidinotransferase, mitochondrial precursor
(L-arginine:glycine amidinotransferase) (Transamidinase)
(AT)
Length = 423
Score = 151 bits (382), Expect = 4e-37
Identities = 72/122 (59%), Positives = 92/122 (75%), Gaps = 7/122 (5%)
Frame = +3
Query: 9 QWTTPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWT 188
++ TP F STGLY+AMPRD ++VVG+EIIE+PMAWR R+FEY AYR +I+ YF+ GA+WT
Sbjct: 152 KYKTPDFESTGLYSAMPRDILMVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWT 211
Query: 189 SAPKCTMEEGLYDMKFDVS--QDKPYV-----YVTTELEPCFDAADFTRVGRDIFGQRSH 347
+APK TM + LYD + + +D+ + +VTTE EPCFDAADF R GRDIF QRS
Sbjct: 212 TAPKPTMADELYDQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQ 271
Query: 348 VT 353
VT
Sbjct: 272 VT 273
>sp|P50441|GATM_PIG Glycine amidinotransferase (L-arginine:glycine amidinotransferase)
(Transamidinase) (AT)
Length = 386
Score = 150 bits (380), Expect = 7e-37
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 7/122 (5%)
Frame = +3
Query: 9 QWTTPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWT 188
++ TP F STGLY AMPRD ++VVG+EIIE+PMAWR R+FEY AYR +I+ YF GA+WT
Sbjct: 115 KYKTPDFESTGLYGAMPRDILIVVGNEIIEAPMAWRARFFEYRAYRSIIKDYFRRGAKWT 174
Query: 189 SAPKCTMEEGLYDMKFDV--SQDKPYV-----YVTTELEPCFDAADFTRVGRDIFGQRSH 347
+APK TM + LYD + + +D+ + +VTTE EPCFDAADF R GRDIF QRS
Sbjct: 175 TAPKPTMADELYDQDYPIYSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQ 234
Query: 348 VT 353
VT
Sbjct: 235 VT 236
>sp|P50440|GATM_HUMAN Glycine amidinotransferase, mitochondrial precursor
(L-arginine:glycine amidinotransferase) (Transamidinase)
(AT)
Length = 423
Score = 149 bits (377), Expect = 1e-36
Identities = 71/122 (58%), Positives = 92/122 (75%), Gaps = 7/122 (5%)
Frame = +3
Query: 9 QWTTPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWT 188
++ TP F STGLY+AMPRD ++VVG+EIIE+PMAWR R+FEY AYR +I+ YF+ GA+WT
Sbjct: 152 KYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWT 211
Query: 189 SAPKCTMEEGLYDMKFDVS--QDKPYV-----YVTTELEPCFDAADFTRVGRDIFGQRSH 347
+APK TM + LY+ + + +D+ + +VTTE EPCFDAADF R GRDIF QRS
Sbjct: 212 TAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQ 271
Query: 348 VT 353
VT
Sbjct: 272 VT 273
>sp|P29780|STRB2_STRGR Putative inosamine-phosphate amidinotransferase II (Aminocyclitol
amidinotransferase) (ADT)
Length = 349
Score = 84.0 bits (206), Expect = 1e-16
Identities = 46/104 (44%), Positives = 61/104 (58%)
Frame = +3
Query: 18 TPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAP 197
TP + S G PRD +LVVGD +IE+PMA R R+ E AY+ L+ +Y G+RW SAP
Sbjct: 94 TPDWESDGYGDLCPRDGLLVVGDTVIEAPMALRARFLESLAYKELLVEYLAAGSRWISAP 153
Query: 198 KCTMEEGLYDMKFDVSQDKPYVYVTTELEPCFDAADFTRVGRDI 329
K + EG+Y S P +LEP FDAA+ R+G D+
Sbjct: 154 KPRLAEGMY------SPSGPSGERLRDLEPVFDAANVLRLGTDL 191
>sp|Q54258|STRB1_STRGA Inosamine-phosphate amidinotransferase I (Aminocyclitol
amidinotransferase) (ADT)
Length = 348
Score = 83.2 bits (204), Expect = 2e-16
Identities = 43/104 (41%), Positives = 60/104 (57%)
Frame = +3
Query: 18 TPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAP 197
TP + + G + PRD +L VG +IESPMA R R+ E AY+ ++ +YF GARW SAP
Sbjct: 93 TPDWQTDGFHDYCPRDGLLAVGQTVIESPMALRARFLESLAYKDILLEYFASGARWLSAP 152
Query: 198 KCTMEEGLYDMKFDVSQDKPYVYVTTELEPCFDAADFTRVGRDI 329
K + + +Y+ Q T+LEP FDAA+ R G D+
Sbjct: 153 KPRLADEMYEPTAPAGQR------LTDLEPVFDAANVLRFGTDL 190
>sp|P08078|STRB1_STRGR Inosamine-phosphate amidinotransferase I (Aminocyclitol
amidinotransferase) (ADT)
Length = 347
Score = 75.9 bits (185), Expect = 3e-14
Identities = 42/104 (40%), Positives = 58/104 (55%)
Frame = +3
Query: 18 TPKFSSTGLYAAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAP 197
TP + + G + PRD +L VG IIE+PMA R R+ E AY+ L+ +YF G+RW SAP
Sbjct: 93 TPDWETDGFHDYCPRDGLLSVGQTIIETPMALRSRFLESLAYKDLLLEYFASGSRWLSAP 152
Query: 198 KCTMEEGLYDMKFDVSQDKPYVYVTTELEPCFDAADFTRVGRDI 329
K + + Y + P T+ EP FDAA+ R G D+
Sbjct: 153 KPRLTDDSY------APQAPAGERLTDEEPVFDAANVLRFGTDL 190
>sp|Q54264|STRB2_STRGA Putative inosamine-phosphate amidinotransferase II (Aminocyclitol
amidinotransferase) (ADT)
Length = 319
Score = 57.0 bits (136), Expect = 1e-08
Identities = 33/94 (35%), Positives = 47/94 (50%)
Frame = +3
Query: 48 AAMPRDFMLVVGDEIIESPMAWRCRYFEYEAYRPLIRKYFNEGARWTSAPKCTMEEGLYD 227
A PRD +L VG+ +I++P + A R L+ +YF G+RW SAP + + +YD
Sbjct: 74 AYRPRDGLLTVGETVIQTPAVPGLPSLQSPACRMLLMEYFTSGSRWISAPPPVLTDVMYD 133
Query: 228 MKFDVSQDKPYVYVTTELEPCFDAADFTRVGRDI 329
P ELEP FDA R+G D+
Sbjct: 134 ------PTAPAGERLRELEPVFDADTVLRIGTDL 161
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
(CDP-diglyceride synthetase) (CDP-diglyceride
pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)
(CTP:phosphatidate cytidylyltransferase) (CDP-DAG
synthase) (CDP-DG synthetase)
Length = 447
Score = 33.9 bits (76), Expect = 0.12
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 253 LSW---LTSNFISYKPSSIVHFGAEVHRAPSLKYFLINGRYASYSKYL 119
LSW LTSN+ Y + + +FG ++R LK+ + R+ S++ Y+
Sbjct: 142 LSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYI 189
>sp|Q9UQ07|MOK_HUMAN MAPK/MAK/MRK overlapping kinase (MOK protein kinase) (Renal tumor
antigen 1) (RAGE-1)
Length = 419
Score = 31.2 bits (69), Expect = 0.77
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 180 RWTSAPKCTMEEGLYDMKFDVSQDKPYVYVTTELEPCF 293
RW AP+C + +G Y K D+ Y L+P F
Sbjct: 165 RWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLF 202
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,042,912
Number of Sequences: 369166
Number of extensions: 883361
Number of successful extensions: 1871
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 68,354,980
effective HSP length: 85
effective length of database: 52,652,505
effective search space used: 1684880160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)