Planaria EST Database


DrC_00977

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00977
         (1050 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60936|CABC1_MOUSE  Chaperone-activity of bc1 complex-lik...   382   e-105
sp|Q8NI60|CABC1_HUMAN  Chaperone-activity of bc1 complex-lik...   378   e-104
sp|Q18486|YLC4_CAEEL  Hypothetical protein C35D10.4 in chrom...   370   e-102
sp|Q92338|ABCI_SCHPO  Protein ABC1 homolog, mitochondrial pr...   325   2e-88
sp|P27697|ABC1_YEAST  Protein ABC1, mitochondrial precursor       324   2e-88
sp|P96936|Y647_MYCTU  Hypothetical protein Rv0647c/MT0675          93   1e-18
sp|Q55884|Y095_SYNY3  Hypothetical protein sll0095                 84   9e-16
sp|P73627|Y1770_SYNY3  Hypothetical protein sll1770                82   3e-15
sp|Q87TH2|UBIB_VIBPA  Probable ubiquinone biosynthesis prote...    81   6e-15
sp|Q7NZD1|UBIB_CHRVO  Probable ubiquinone biosynthesis prote...    78   5e-14
>sp|Q60936|CABC1_MOUSE Chaperone-activity of bc1 complex-like, mitochondrial precursor
            (Chaperone-ABC1-like)
          Length = 645

 Score =  382 bits (980), Expect = e-105
 Identities = 183/345 (53%), Positives = 248/345 (71%)
 Frame = +2

Query: 2    ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181
            ER RQ+ADFMP+KQM K +  +LG +WR+K   F+E+PFAAASIGQVH A +     +EV
Sbjct: 295  ERVRQSADFMPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKG--GREV 352

Query: 182  AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361
            A+KIQYPGV +SI+SD NNLM++L   + LP GL     I+V +REL  ECDY+REA + 
Sbjct: 353  AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYA 412

Query: 362  SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541
              F +   + P F VP+++ EL +  VLTTE + G  LD+   + QE+R+ +   ++ LC
Sbjct: 413  KKFRELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVLC 472

Query: 542  LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721
            L+ELFEF  MQTDPNW+NF ++ ++ K+ L+DFGA+REY +SF D Y++VI+ A+ Q+++
Sbjct: 473  LRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDRE 532

Query: 722  QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVML 901
             +LK S ++ FLTG+E + ME AH+DA+ ILGE F S  PFDFG QSTT++I  LIPVML
Sbjct: 533  AVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPVML 592

Query: 902  EHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036
            +HRL  PPEETYSLHRK+ G FL+CSKLKAR  C  +F + Y  Y
Sbjct: 593  KHRLIPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637
>sp|Q8NI60|CABC1_HUMAN Chaperone-activity of bc1 complex-like, mitochondrial precursor
            (Chaperone-ABC1-like)
          Length = 647

 Score =  378 bits (971), Expect = e-104
 Identities = 184/345 (53%), Positives = 245/345 (71%)
 Frame = +2

Query: 2    ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181
            ER RQ+ADFMP+KQM K +  +LG NWR+K   F+E+PFAAASIGQVH A +     +EV
Sbjct: 298  ERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKG--GREV 355

Query: 182  AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361
            A+KIQYPGV +SI+SD NNLM++L   + LP GL     I+V +RELA ECDY+REA   
Sbjct: 356  AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACA 415

Query: 362  SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541
              F D     P F VP+++ EL +  VLTTE V G  LD+   + QEIR+ +   ++ LC
Sbjct: 416  RKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLC 475

Query: 542  LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721
            L+ELFEF  MQTDPNW+NF ++ ++ K+ L+DFGA+REY +SF D Y+++I+ A+ ++++
Sbjct: 476  LRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRE 535

Query: 722  QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVML 901
             +   S ++ FLTG+E ++ME AH+DA+ ILGE F S  PFDFG QSTT++I  LIPVML
Sbjct: 536  TVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVML 595

Query: 902  EHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036
             HRL  PPEETYSLHRK+ G FL+CSKLKAR  C  +F + Y  Y
Sbjct: 596  RHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q18486|YLC4_CAEEL Hypothetical protein C35D10.4 in chromosome III
          Length = 755

 Score =  370 bits (950), Expect = e-102
 Identities = 186/351 (52%), Positives = 249/351 (70%), Gaps = 4/351 (1%)
 Frame = +2

Query: 2    ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181
            ER RQ+ADFMP+KQ+++ M    GD+WREKF  FD+KPFA ASIGQVH+A L +  N  V
Sbjct: 397  ERVRQSADFMPIKQVHRQMKDAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRN--V 454

Query: 182  AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361
            AVK+QYPGV   IDSD +NL+S+L      P G+  +  + VA+REL  ECDY REA+  
Sbjct: 455  AVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAM 514

Query: 362  SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541
              F +  A+     VP+VI ELS+ +VLTTE V+G  +D CV   Q +RD++  + + LC
Sbjct: 515  KKFRELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELC 574

Query: 542  LKELFEFRTMQTDPNWANFLFNVE----KGKIYLIDFGASREYQKSFVDDYLRVIKYASL 709
            LKE+F +R MQTDPNW+NF         + ++ L+DFGASR Y K FVD Y+ +IK A  
Sbjct: 575  LKEIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYD 634

Query: 710  QNKQQILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELI 889
             +K++I++YSR++GFLTG+ET +ME AH+++V I+GE   S+ P++F  Q  T RI++LI
Sbjct: 635  GDKKKIIEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMRIQKLI 694

Query: 890  PVMLEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKYKF 1042
            PVMLEHRLTSPPEE YSLHRKLSG +LL +KLKA VSC  LF++I++ Y F
Sbjct: 695  PVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVF 745
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial precursor
          Length = 610

 Score =  325 bits (832), Expect = 2e-88
 Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 2/347 (0%)
 Frame = +2

Query: 2    ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181
            ER R  A  MP KQ+ +VMVK LG NW   + EFD KP AAASIGQVHRA L++  + EV
Sbjct: 264  ERVRDGAHSMPEKQLEQVMVKNLGKNWMTHYSEFDRKPMAAASIGQVHRARLASN-HMEV 322

Query: 182  AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361
             VK+QYPGV  SIDSD NNL  LL+    LP GL    ++  A++EL WECDY REA F 
Sbjct: 323  VVKVQYPGVMSSIDSDLNNLAYLLKASRILPKGLFLENSLAAARKELKWECDYEREAAFA 382

Query: 362  SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541
              F     ND  F VP V  E S   V+T E++HGI+L K     Q  R+ +G  + + C
Sbjct: 383  ERFGSLLKNDSDFKVPMVFREASGPSVITLEYLHGIALGK-QKYSQATRNHIGYLLTKQC 441

Query: 542  LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721
            L+E+ E+  MQTDPNW+NFL+N +  KI L+DFGAS EY + F+  Y R++  A+ +N++
Sbjct: 442  LREISEYHFMQTDPNWSNFLYNGKTKKIELLDFGASIEYDEKFIKKYCRLLLAAAHRNRE 501

Query: 722  QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLP--FDFGRQSTTKRIKELIPV 895
            +  K S +LG+L   E+  M  AHI+++  L E F    P  +DFG Q+ T R+K+ IPV
Sbjct: 502  KCKKLSVELGYLNNHESAQMIDAHINSIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPV 561

Query: 896  MLEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036
            ML+ RL  PPEETYSLHR+LSG FLLC+KL A+V C +LF+ +   Y
Sbjct: 562  MLDLRLQPPPEETYSLHRRLSGHFLLCAKLGAKVRCKELFSGMLKHY 608
>sp|P27697|ABC1_YEAST Protein ABC1, mitochondrial precursor
          Length = 501

 Score =  324 bits (831), Expect = 2e-88
 Identities = 167/343 (48%), Positives = 228/343 (66%), Gaps = 2/343 (0%)
 Frame = +2

Query: 5    RARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVA 184
            R + +A+ MP +Q+ KVM KELG NW+ KF +FD+ P AAASIGQVH A L  P  + V 
Sbjct: 157  RVQNSANHMPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAEL--PSGQRVV 214

Query: 185  VKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFGS 364
            VKIQYPGVK SIDSD N+L+ LL   S LP GL  +K I  A+ EL WECDY REA+   
Sbjct: 215  VKIQYPGVKESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQ 274

Query: 365  WFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLCL 544
             F     +DP F VP V PE +T+ ++T   + G  + K     QE ++++   +MRLCL
Sbjct: 275  KFEALLKDDPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCL 334

Query: 545  KELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQQ 724
            +E+  F+ MQTDPNWANFL+N    KI L+DFGASR + + F+  Y +++ YA+L++++ 
Sbjct: 335  EEIATFKYMQTDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDRKG 394

Query: 725  ILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSL--PFDFGRQSTTKRIKELIPVM 898
              + S +LG+LTG E+Q M+ AH+D+V  LGE F   +   FDF  Q+ + RI+  I +M
Sbjct: 395  AYEMSVQLGYLTGLESQSMKDAHVDSVLTLGEPFRGDVDKSFDFKDQTVSDRIRGNIGLM 454

Query: 899  LEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIY 1027
            L  RL  PPEETYSLHRK SG FLLC+++ A V C++LF +I+
Sbjct: 455  LNERLCPPPEETYSLHRKFSGIFLLCARMGASVHCAKLFKEIF 497
>sp|P96936|Y647_MYCTU Hypothetical protein Rv0647c/MT0675
          Length = 488

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 9/210 (4%)
 Frame = +2

Query: 41  QMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRSI 220
           +++K+ V+ELGD     F  F+E+PFA+ASI QVH A L +   +EV VKIQ PG++R +
Sbjct: 143 EVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRS--GEEVVVKIQRPGIRRRV 200

Query: 221 DSDFNNLMSLLRFVSALPPG--LHANKAIEVAKRELAWECDYRREAQFGSWFADKFANDP 394
            +D   L    + V     G  L A   +      LA E D+R EAQ    +       P
Sbjct: 201 AADLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAEELDFRLEAQSMEAWVSHLHASP 260

Query: 395 I---FVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLCLKELFE-- 559
           +     VP+V  + +TE+VLT E VHGI +D   ++ +   D  G ++++  L  +FE  
Sbjct: 261 LGKNIRVPQVHWDFTTERVLTMERVHGIRIDNAAAIRKAGFD--GVELVKALLFSVFEGG 318

Query: 560 --FRTMQTDPNWANFLFNVEKGKIYLIDFG 643
                   D +  N L+  E G+I   DFG
Sbjct: 319 LRHGLFHGDLHAGN-LYVDEAGRIVFFDFG 347
>sp|Q55884|Y095_SYNY3 Hypothetical protein sll0095
          Length = 567

 Score = 83.6 bits (205), Expect = 9e-16
 Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
 Frame = +2

Query: 38  KQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRS 217
           +Q   V+ +EL     E F +F+  P A+AS+GQVHRA L  P  + V VK+Q PG+   
Sbjct: 107 RQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVL--PTGEAVVVKVQRPGLDSL 164

Query: 218 IDSDFNNLMSLLRFVSALPPG---LHANKAIEVAKRE----LAWECDYRREAQFGSWFAD 376
           ++ DF  L   LR      PG   L     IE   +E    L  E DY  E +    F  
Sbjct: 165 LNLDFELLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQ 224

Query: 377 KFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQM-----MRLC 541
            FA+ P   VP++  + +T  VLT E++ GI +D     D++  +  G  +       +C
Sbjct: 225 NFADYPRVRVPEIYWQYTTRMVLTLEYLPGIKVD-----DRQALETAGINLDLVIQTGIC 279

Query: 542 --LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQN 715
             LK+L      Q+DP+  N   +  +G +   DFG   E +    D  ++       ++
Sbjct: 280 AYLKQLLVDGFFQSDPHPGNMAVD-SQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKD 338

Query: 716 KQQILK 733
             Q+L+
Sbjct: 339 TNQVLE 344
>sp|P73627|Y1770_SYNY3 Hypothetical protein sll1770
          Length = 585

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 5/305 (1%)
 Frame = +2

Query: 38   KQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRS 217
            +Q   ++ +ELG    + +  FD  P AAAS+GQVH+A L     ++V VK+Q PG+K+ 
Sbjct: 134  EQAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHT--GEDVVVKVQRPGLKKL 191

Query: 218  IDSDFNNLMSLLRFVSALPP---GLHANKAIEVAKRELAWECDYRREAQFGSWFADKFAN 388
               D   L  + ++    P    G   N   E   + L  E DY RE +    F   F  
Sbjct: 192  FTIDLAILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRG 251

Query: 389  DPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQE--IRDWVGSQMMRLCLKELFEF 562
            +    VP+V    ++ Q+LT E++ GI +    +++     R  +     R  L +L   
Sbjct: 252  EDWVKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNH 311

Query: 563  RTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQQILKYSR 742
                 DP+  N   + E G++   DFG   E      +  +  +   + +N ++I+    
Sbjct: 312  GFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLV 371

Query: 743  KLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVMLEHRLTSP 922
             LG L   ET+ M         +L        PF+   QS TK   +L  +  +     P
Sbjct: 372  ALGALK--ETEDMGPIRRSVQFLLDNFMDK--PFE--EQSITKISDDLYEIAYDQPFRFP 425

Query: 923  PEETY 937
               T+
Sbjct: 426  ATFTF 430
>sp|Q87TH2|UBIB_VIBPA Probable ubiquinone biosynthesis protein ubiB
          Length = 544

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
 Frame = +2

Query: 56  MVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRSIDSDFN 235
           M K LG      F EFD KP A+ASI QVH A L +  N+EV +K+  P ++  IDSD  
Sbjct: 109 MEKALGGPLENWFTEFDIKPLASASIAQVHTARLKD-TNQEVVLKVIRPDIRPVIDSDLK 167

Query: 236 NLMSLLRFVSALPPGLHANKAIEVAK---RELAWECDYRREAQFGSWFADKFANDPIFVV 406
            +  + R V+   P     K +EV +   + L  E D RREA         F       V
Sbjct: 168 LMHRMARIVAGAMPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFEGSEELYV 227

Query: 407 PKVIPELSTEQVLTTEFVHGISL 475
           P+V P+ S E V+ +E ++GI +
Sbjct: 228 PEVFPDFSNETVMVSERIYGIQV 250
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein ubiB
          Length = 508

 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
 Frame = +2

Query: 50  KVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPP---NKEVAVKIQYPGVKRSI 220
           +V+ + LG    E F++FD KP A+AS+ QVH+A L  P     +EVAVK+  PG+   I
Sbjct: 102 QVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVI 161

Query: 221 DSDFNNLMSLLRFVSAL---PPGLHANKAIEVAKRELAWECDYRREAQFGSWFADKFAND 391
           + D + + +L  +V  L      L   + +    + L  E D   EA   S     F   
Sbjct: 162 EQDLSLMRTLAGWVEKLFADGKRLKpreVVAEFDKYLHDELDMMHEAANASQLRRNFKGS 221

Query: 392 PIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC-------LKE 550
            + +VP+V  + S+ +VLT E++HGI     V   + +R+  G  + +L          +
Sbjct: 222 DMLIVPEVFYDYSSREVLTLEWMHGIP----VGQIERLRE-AGVDLQKLSRFGVEIFFTQ 276

Query: 551 LFEFRTMQTDPNWANFLFNVEKGKIYLIDFG 643
           +F       D +  N +F    G+   +DFG
Sbjct: 277 VFRHGFFHADMHPGN-IFVAADGRYIALDFG 306
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,757,470
Number of Sequences: 369166
Number of extensions: 2632179
Number of successful extensions: 7527
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7466
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11388156010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00977

  1. Dr_sW_024_L06
  2. Dr_sW_020_L14
  3. Dr_sW_003_E04