DrC_00977
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00977 (1050 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q60936|CABC1_MOUSE Chaperone-activity of bc1 complex-lik... 382 e-105 sp|Q8NI60|CABC1_HUMAN Chaperone-activity of bc1 complex-lik... 378 e-104 sp|Q18486|YLC4_CAEEL Hypothetical protein C35D10.4 in chrom... 370 e-102 sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial pr... 325 2e-88 sp|P27697|ABC1_YEAST Protein ABC1, mitochondrial precursor 324 2e-88 sp|P96936|Y647_MYCTU Hypothetical protein Rv0647c/MT0675 93 1e-18 sp|Q55884|Y095_SYNY3 Hypothetical protein sll0095 84 9e-16 sp|P73627|Y1770_SYNY3 Hypothetical protein sll1770 82 3e-15 sp|Q87TH2|UBIB_VIBPA Probable ubiquinone biosynthesis prote... 81 6e-15 sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis prote... 78 5e-14
>sp|Q60936|CABC1_MOUSE Chaperone-activity of bc1 complex-like, mitochondrial precursor (Chaperone-ABC1-like) Length = 645 Score = 382 bits (980), Expect = e-105 Identities = 183/345 (53%), Positives = 248/345 (71%) Frame = +2 Query: 2 ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181 ER RQ+ADFMP+KQM K + +LG +WR+K F+E+PFAAASIGQVH A + +EV Sbjct: 295 ERVRQSADFMPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKG--GREV 352 Query: 182 AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361 A+KIQYPGV +SI+SD NNLM++L + LP GL I+V +REL ECDY+REA + Sbjct: 353 AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYA 412 Query: 362 SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541 F + + P F VP+++ EL + VLTTE + G LD+ + QE+R+ + ++ LC Sbjct: 413 KKFRELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVLC 472 Query: 542 LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721 L+ELFEF MQTDPNW+NF ++ ++ K+ L+DFGA+REY +SF D Y++VI+ A+ Q+++ Sbjct: 473 LRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDRE 532 Query: 722 QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVML 901 +LK S ++ FLTG+E + ME AH+DA+ ILGE F S PFDFG QSTT++I LIPVML Sbjct: 533 AVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPVML 592 Query: 902 EHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036 +HRL PPEETYSLHRK+ G FL+CSKLKAR C +F + Y Y Sbjct: 593 KHRLIPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637
>sp|Q8NI60|CABC1_HUMAN Chaperone-activity of bc1 complex-like, mitochondrial precursor (Chaperone-ABC1-like) Length = 647 Score = 378 bits (971), Expect = e-104 Identities = 184/345 (53%), Positives = 245/345 (71%) Frame = +2 Query: 2 ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181 ER RQ+ADFMP+KQM K + +LG NWR+K F+E+PFAAASIGQVH A + +EV Sbjct: 298 ERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKG--GREV 355 Query: 182 AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361 A+KIQYPGV +SI+SD NNLM++L + LP GL I+V +RELA ECDY+REA Sbjct: 356 AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACA 415 Query: 362 SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541 F D P F VP+++ EL + VLTTE V G LD+ + QEIR+ + ++ LC Sbjct: 416 RKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLC 475 Query: 542 LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721 L+ELFEF MQTDPNW+NF ++ ++ K+ L+DFGA+REY +SF D Y+++I+ A+ ++++ Sbjct: 476 LRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRE 535 Query: 722 QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVML 901 + S ++ FLTG+E ++ME AH+DA+ ILGE F S PFDFG QSTT++I LIPVML Sbjct: 536 TVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVML 595 Query: 902 EHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036 HRL PPEETYSLHRK+ G FL+CSKLKAR C +F + Y Y Sbjct: 596 RHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q18486|YLC4_CAEEL Hypothetical protein C35D10.4 in chromosome III Length = 755 Score = 370 bits (950), Expect = e-102 Identities = 186/351 (52%), Positives = 249/351 (70%), Gaps = 4/351 (1%) Frame = +2 Query: 2 ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181 ER RQ+ADFMP+KQ+++ M GD+WREKF FD+KPFA ASIGQVH+A L + N V Sbjct: 397 ERVRQSADFMPIKQVHRQMKDAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRN--V 454 Query: 182 AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361 AVK+QYPGV IDSD +NL+S+L P G+ + + VA+REL ECDY REA+ Sbjct: 455 AVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAM 514 Query: 362 SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541 F + A+ VP+VI ELS+ +VLTTE V+G +D CV Q +RD++ + + LC Sbjct: 515 KKFRELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELC 574 Query: 542 LKELFEFRTMQTDPNWANFLFNVE----KGKIYLIDFGASREYQKSFVDDYLRVIKYASL 709 LKE+F +R MQTDPNW+NF + ++ L+DFGASR Y K FVD Y+ +IK A Sbjct: 575 LKEIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYD 634 Query: 710 QNKQQILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELI 889 +K++I++YSR++GFLTG+ET +ME AH+++V I+GE S+ P++F Q T RI++LI Sbjct: 635 GDKKKIIEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMRIQKLI 694 Query: 890 PVMLEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKYKF 1042 PVMLEHRLTSPPEE YSLHRKLSG +LL +KLKA VSC LF++I++ Y F Sbjct: 695 PVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVF 745
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial precursor Length = 610 Score = 325 bits (832), Expect = 2e-88 Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 2/347 (0%) Frame = +2 Query: 2 ERARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEV 181 ER R A MP KQ+ +VMVK LG NW + EFD KP AAASIGQVHRA L++ + EV Sbjct: 264 ERVRDGAHSMPEKQLEQVMVKNLGKNWMTHYSEFDRKPMAAASIGQVHRARLASN-HMEV 322 Query: 182 AVKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFG 361 VK+QYPGV SIDSD NNL LL+ LP GL ++ A++EL WECDY REA F Sbjct: 323 VVKVQYPGVMSSIDSDLNNLAYLLKASRILPKGLFLENSLAAARKELKWECDYEREAAFA 382 Query: 362 SWFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC 541 F ND F VP V E S V+T E++HGI+L K Q R+ +G + + C Sbjct: 383 ERFGSLLKNDSDFKVPMVFREASGPSVITLEYLHGIALGK-QKYSQATRNHIGYLLTKQC 441 Query: 542 LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQ 721 L+E+ E+ MQTDPNW+NFL+N + KI L+DFGAS EY + F+ Y R++ A+ +N++ Sbjct: 442 LREISEYHFMQTDPNWSNFLYNGKTKKIELLDFGASIEYDEKFIKKYCRLLLAAAHRNRE 501 Query: 722 QILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSLP--FDFGRQSTTKRIKELIPV 895 + K S +LG+L E+ M AHI+++ L E F P +DFG Q+ T R+K+ IPV Sbjct: 502 KCKKLSVELGYLNNHESAQMIDAHINSIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPV 561 Query: 896 MLEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIYDKY 1036 ML+ RL PPEETYSLHR+LSG FLLC+KL A+V C +LF+ + Y Sbjct: 562 MLDLRLQPPPEETYSLHRRLSGHFLLCAKLGAKVRCKELFSGMLKHY 608
>sp|P27697|ABC1_YEAST Protein ABC1, mitochondrial precursor Length = 501 Score = 324 bits (831), Expect = 2e-88 Identities = 167/343 (48%), Positives = 228/343 (66%), Gaps = 2/343 (0%) Frame = +2 Query: 5 RARQNADFMPVKQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVA 184 R + +A+ MP +Q+ KVM KELG NW+ KF +FD+ P AAASIGQVH A L P + V Sbjct: 157 RVQNSANHMPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAEL--PSGQRVV 214 Query: 185 VKIQYPGVKRSIDSDFNNLMSLLRFVSALPPGLHANKAIEVAKRELAWECDYRREAQFGS 364 VKIQYPGVK SIDSD N+L+ LL S LP GL +K I A+ EL WECDY REA+ Sbjct: 215 VKIQYPGVKESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQ 274 Query: 365 WFADKFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLCL 544 F +DP F VP V PE +T+ ++T + G + K QE ++++ +MRLCL Sbjct: 275 KFEALLKDDPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCL 334 Query: 545 KELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQQ 724 +E+ F+ MQTDPNWANFL+N KI L+DFGASR + + F+ Y +++ YA+L++++ Sbjct: 335 EEIATFKYMQTDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDRKG 394 Query: 725 ILKYSRKLGFLTGFETQIMEQAHIDAVSILGEVFTSSL--PFDFGRQSTTKRIKELIPVM 898 + S +LG+LTG E+Q M+ AH+D+V LGE F + FDF Q+ + RI+ I +M Sbjct: 395 AYEMSVQLGYLTGLESQSMKDAHVDSVLTLGEPFRGDVDKSFDFKDQTVSDRIRGNIGLM 454 Query: 899 LEHRLTSPPEETYSLHRKLSGGFLLCSKLKARVSCSQLFNKIY 1027 L RL PPEETYSLHRK SG FLLC+++ A V C++LF +I+ Sbjct: 455 LNERLCPPPEETYSLHRKFSGIFLLCARMGASVHCAKLFKEIF 497
>sp|P96936|Y647_MYCTU Hypothetical protein Rv0647c/MT0675 Length = 488 Score = 92.8 bits (229), Expect = 1e-18 Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 9/210 (4%) Frame = +2 Query: 41 QMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRSI 220 +++K+ V+ELGD F F+E+PFA+ASI QVH A L + +EV VKIQ PG++R + Sbjct: 143 EVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRS--GEEVVVKIQRPGIRRRV 200 Query: 221 DSDFNNLMSLLRFVSALPPG--LHANKAIEVAKRELAWECDYRREAQFGSWFADKFANDP 394 +D L + V G L A + LA E D+R EAQ + P Sbjct: 201 AADLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAEELDFRLEAQSMEAWVSHLHASP 260 Query: 395 I---FVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLCLKELFE-- 559 + VP+V + +TE+VLT E VHGI +D ++ + D G ++++ L +FE Sbjct: 261 LGKNIRVPQVHWDFTTERVLTMERVHGIRIDNAAAIRKAGFD--GVELVKALLFSVFEGG 318 Query: 560 --FRTMQTDPNWANFLFNVEKGKIYLIDFG 643 D + N L+ E G+I DFG Sbjct: 319 LRHGLFHGDLHAGN-LYVDEAGRIVFFDFG 347
>sp|Q55884|Y095_SYNY3 Hypothetical protein sll0095 Length = 567 Score = 83.6 bits (205), Expect = 9e-16 Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 14/246 (5%) Frame = +2 Query: 38 KQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRS 217 +Q V+ +EL E F +F+ P A+AS+GQVHRA L P + V VK+Q PG+ Sbjct: 107 RQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVL--PTGEAVVVKVQRPGLDSL 164 Query: 218 IDSDFNNLMSLLRFVSALPPG---LHANKAIEVAKRE----LAWECDYRREAQFGSWFAD 376 ++ DF L LR PG L IE +E L E DY E + F Sbjct: 165 LNLDFELLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQ 224 Query: 377 KFANDPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQM-----MRLC 541 FA+ P VP++ + +T VLT E++ GI +D D++ + G + +C Sbjct: 225 NFADYPRVRVPEIYWQYTTRMVLTLEYLPGIKVD-----DRQALETAGINLDLVIQTGIC 279 Query: 542 --LKELFEFRTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQN 715 LK+L Q+DP+ N + +G + DFG E + D ++ ++ Sbjct: 280 AYLKQLLVDGFFQSDPHPGNMAVD-SQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKD 338 Query: 716 KQQILK 733 Q+L+ Sbjct: 339 TNQVLE 344
>sp|P73627|Y1770_SYNY3 Hypothetical protein sll1770 Length = 585 Score = 82.0 bits (201), Expect = 3e-15 Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 5/305 (1%) Frame = +2 Query: 38 KQMNKVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRS 217 +Q ++ +ELG + + FD P AAAS+GQVH+A L ++V VK+Q PG+K+ Sbjct: 134 EQAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHT--GEDVVVKVQRPGLKKL 191 Query: 218 IDSDFNNLMSLLRFVSALPP---GLHANKAIEVAKRELAWECDYRREAQFGSWFADKFAN 388 D L + ++ P G N E + L E DY RE + F F Sbjct: 192 FTIDLAILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRG 251 Query: 389 DPIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQE--IRDWVGSQMMRLCLKELFEF 562 + VP+V ++ Q+LT E++ GI + +++ R + R L +L Sbjct: 252 EDWVKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNH 311 Query: 563 RTMQTDPNWANFLFNVEKGKIYLIDFGASREYQKSFVDDYLRVIKYASLQNKQQILKYSR 742 DP+ N + E G++ DFG E + + + + +N ++I+ Sbjct: 312 GFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLV 371 Query: 743 KLGFLTGFETQIMEQAHIDAVSILGEVFTSSLPFDFGRQSTTKRIKELIPVMLEHRLTSP 922 LG L ET+ M +L PF+ QS TK +L + + P Sbjct: 372 ALGALK--ETEDMGPIRRSVQFLLDNFMDK--PFE--EQSITKISDDLYEIAYDQPFRFP 425 Query: 923 PEETY 937 T+ Sbjct: 426 ATFTF 430
>sp|Q87TH2|UBIB_VIBPA Probable ubiquinone biosynthesis protein ubiB Length = 544 Score = 80.9 bits (198), Expect = 6e-15 Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 3/143 (2%) Frame = +2 Query: 56 MVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPPNKEVAVKIQYPGVKRSIDSDFN 235 M K LG F EFD KP A+ASI QVH A L + N+EV +K+ P ++ IDSD Sbjct: 109 MEKALGGPLENWFTEFDIKPLASASIAQVHTARLKD-TNQEVVLKVIRPDIRPVIDSDLK 167 Query: 236 NLMSLLRFVSALPPGLHANKAIEVAK---RELAWECDYRREAQFGSWFADKFANDPIFVV 406 + + R V+ P K +EV + + L E D RREA F V Sbjct: 168 LMHRMARIVAGAMPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFEGSEELYV 227 Query: 407 PKVIPELSTEQVLTTEFVHGISL 475 P+V P+ S E V+ +E ++GI + Sbjct: 228 PEVFPDFSNETVMVSERIYGIQV 250
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein ubiB Length = 508 Score = 77.8 bits (190), Expect = 5e-14 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 13/211 (6%) Frame = +2 Query: 50 KVMVKELGDNWREKFIEFDEKPFAAASIGQVHRAALSNPP---NKEVAVKIQYPGVKRSI 220 +V+ + LG E F++FD KP A+AS+ QVH+A L P +EVAVK+ PG+ I Sbjct: 102 QVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVI 161 Query: 221 DSDFNNLMSLLRFVSAL---PPGLHANKAIEVAKRELAWECDYRREAQFGSWFADKFAND 391 + D + + +L +V L L + + + L E D EA S F Sbjct: 162 EQDLSLMRTLAGWVEKLFADGKRLKpreVVAEFDKYLHDELDMMHEAANASQLRRNFKGS 221 Query: 392 PIFVVPKVIPELSTEQVLTTEFVHGISLDKCVSMDQEIRDWVGSQMMRLC-------LKE 550 + +VP+V + S+ +VLT E++HGI V + +R+ G + +L + Sbjct: 222 DMLIVPEVFYDYSSREVLTLEWMHGIP----VGQIERLRE-AGVDLQKLSRFGVEIFFTQ 276 Query: 551 LFEFRTMQTDPNWANFLFNVEKGKIYLIDFG 643 +F D + N +F G+ +DFG Sbjct: 277 VFRHGFFHADMHPGN-IFVAADGRYIALDFG 306
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,757,470
Number of Sequences: 369166
Number of extensions: 2632179
Number of successful extensions: 7527
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7466
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11388156010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
