Planaria EST Database

DrC_00893

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00893
         (959 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O17606|YK4P_CAEEL  Hypothetical UPF0160 protein C27H6.8 i...   251   3e-66
sp|Q9HB07|MYG1_HUMAN  MYG1 protein                                244   2e-64
sp|Q9JK81|MYG1_MOUSE  MYG1 protein (Gamm1 protein)                242   1e-63
sp|Q9P7T6|YIW4_SCHPO  Hypothetical UPF0160 protein C694.04c ...   178   2e-44
sp|P40093|YEY6_YEAST  Hypothetical UPF0160 protein YER156c        175   1e-43
sp|O84391|Y386_CHLTR  Hypothetical UPF0160 protein CT386           44   5e-04
sp|Q9Z862|Y489_CHLPN  UPF0160 protein CPn0489/CP0265/CPj0489...    44   7e-04
sp|Q9PK08|Y665_CHLMU  Hypothetical UPF0160 protein TC0665          40   0.010
sp|Q8X598|ARGM_ECO57  Succinylornithine transaminase (Succin...    33   1.6  
sp|P77581|ARGM_ECOLI  Succinylornithine transaminase (Succin...    32   3.5  

>sp|O17606|YK4P_CAEEL Hypothetical UPF0160 protein C27H6.8 in chromosome V
          Length = 340

 Score =  251 bits (640), Expect = 3e-66
 Identities = 129/290 (44%), Positives = 180/290 (62%), Gaps = 5/290 (1%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTT 185
           GG+FD  K ++DHHQ+ F +T +TL+ +  ++ KLSSAGL+Y ++GRE++ +I     ++
Sbjct: 53  GGIFDHSKQRYDHHQRGFTDTMRTLE-KLNFDTKLSSAGLVYAHYGREVINQILGGNVSS 111

Query: 186 IDMDILYDKMYEHFVMEIDAIDNGVPVCDCEPRYSISSNLSGRVSHINP-WGNQKTDENE 362
             +D+ Y ++YE FV  IDAIDNG+   D  PRY  S NLS R    N  W   + D +E
Sbjct: 112 SMIDLFYHRLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWNEPENDADE 171

Query: 363 LCEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWKSH 542
             ++AM+ +G EF   V +  N WW ARE+++ A+D R+ +  SG I+  E GG PWK H
Sbjct: 172 RFQQAMQFIGEEFSRSVKYLANVWWPAREIIEAAVDKRFEIDASGRIILIENGGCPWKEH 231

Query: 543 FFDLE--KNIKEPSKGSQSDSDDAISPYQMRFVLVSDRD--SWRVQCIPVSEKQGFKNRT 710
           FFD+E  KNI          +DD I+     ++L SD    SWRVQ IPV +   F+NR 
Sbjct: 232 FFDIEVEKNI----------ADDNIT-----YILFSDSTNASWRVQAIPVDKMSSFENRM 276

Query: 711 GLLEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTLE 860
            L   WRG+R+D+L  +S IPG VFVH SGFIGGN + +GA+ MA K LE
Sbjct: 277 PLPAAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREGAIAMARKALE 326

>sp|Q9HB07|MYG1_HUMAN MYG1 protein
          Length = 376

 Score =  244 bits (624), Expect = 2e-64
 Identities = 123/293 (41%), Positives = 183/293 (62%), Gaps = 3/293 (1%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTT 185
           GG +DP ++++DHHQ+SF ET  +L P KPW+ KLSSAGLIY++FG ++L ++  P +  
Sbjct: 95  GGEYDPRRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGPSEED 154

Query: 186 IDMDILYDKMYEHFVMEIDAIDNGVPV-CDCEPRYSISSNLSGRVSHINP-WGNQKTDEN 359
             +  LYDKMYE+FV E+DA+DNG+    + EPRY++++ LS RV+ +NP W +   D  
Sbjct: 155 SMVGTLYDKMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQDTE 214

Query: 360 ELCEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWKS 539
              ++AM LV  EF+ +++FY + W  AR +V++A+  R+ V  SG I++  +G  PWK 
Sbjct: 215 AGFKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKE 274

Query: 540 HFFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDR-DSWRVQCIPVSEKQGFKNRTGL 716
           H + LE  +                P  + FV+ +D+   WR+QC+P  E   F++R  L
Sbjct: 275 HLYHLESGLS--------------PPVAIFFVIYTDQAGQWRIQCVP-KEPHSFQSRLPL 319

Query: 717 LEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTLEHSGLL 875
            E WRG+R++ L   S IPG +FVHASGFIGG+ + +GAL MA  TL     L
Sbjct: 320 PEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHPTREGALSMARATLAQRSYL 372

>sp|Q9JK81|MYG1_MOUSE MYG1 protein (Gamm1 protein)
          Length = 380

 Score =  242 bits (618), Expect = 1e-63
 Identities = 122/287 (42%), Positives = 182/287 (63%), Gaps = 3/287 (1%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTT 185
           GG ++P+ +++DHHQ++F ET  +L P KPW+ KLSSAGL+Y++FGR++L ++    +  
Sbjct: 94  GGEYNPQSHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGRKLLAQLLGTSEED 153

Query: 186 IDMDILYDKMYEHFVMEIDAIDNGVPV-CDCEPRYSISSNLSGRVSHINPWGNQKTDENE 362
             +D +YDKMYE+FV E+DA+DNG+    + EPRY++++ LS RV+ +NP  NQ   + E
Sbjct: 154 SVVDTIYDKMYENFVEEVDAVDNGISQWAEGEPRYAMTTTLSARVARLNPTWNQPNQDTE 213

Query: 363 L-CEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWKS 539
               +AM LV  EF+ ++NFY + W  AR +V++A+  R+ V  SG I++  +GG PWK 
Sbjct: 214 AGFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKE 273

Query: 540 HFFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDR-DSWRVQCIPVSEKQGFKNRTGL 716
           H + LE  +                   + FV+ +D+   WRVQC+P  E   F++R  L
Sbjct: 274 HLYHLESELS--------------PKVAITFVIYTDQAGQWRVQCVP-KEPHSFQSRLPL 318

Query: 717 LEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTL 857
            E WRG+R+  L   S IPG +FVHASGFIGG+ + +GAL MA  TL
Sbjct: 319 PEPWRGLRDKALDQVSGIPGCIFVHASGFIGGHHTREGALNMARATL 365

>sp|Q9P7T6|YIW4_SCHPO Hypothetical UPF0160 protein C694.04c in chromosome I
          Length = 324

 Score =  178 bits (451), Expect = 2e-44
 Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 7/292 (2%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTT 185
           GG +D  K  FDHHQ+ FN+TF        +  +LSSAGLIY +FGRE++  +    K  
Sbjct: 55  GGKYDGIKY-FDHHQREFNDTFSP-----KYSTRLSSAGLIYKHFGREVIHAVLPQLKIN 108

Query: 186 I-DMDILYDKMYEHFVMEIDAIDNGVPV--CDCEPRYSISSNLSGRVSHINP-WGNQKTD 353
             D++ LY+K+Y+ FV  +DA DNG+       +P +  + +L   VS   P W ++K D
Sbjct: 109 EQDLETLYEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQD 168

Query: 354 EN---ELCEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGG 524
           +    E  +KA  L+G+ FV  V  Y   W  A+ + ++AI       K   IL  +Q  
Sbjct: 169 DQTYLECFQKASDLMGTWFVRSVEHYALSWLPAKTLAREAILKA----KDSPILIVDQF- 223

Query: 525 FPWKSHFFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDRDSWRVQCIPVSEKQGFKN 704
           FPWK H FD+EK +     G ++         Q ++ + SD  +WRVQ + + +   F  
Sbjct: 224 FPWKGHLFDIEKEL-----GIEN---------QFKYAIYSDGKAWRVQAVSI-DPTSFTC 268

Query: 705 RTGLLEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTLE 860
           R  L E WRGIR+++L   + IPG +FVHASGFIGGN++++GALEMA K L+
Sbjct: 269 RLPLPEPWRGIRDEKLSELTGIPGCIFVHASGFIGGNQTFEGALEMARKALD 320

>sp|P40093|YEY6_YEAST Hypothetical UPF0160 protein YER156c
          Length = 338

 Score =  175 bits (444), Expect = 1e-43
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 13/287 (4%)
 Frame = +3

Query: 36  FDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTTIDMDILYDKM 215
           FDHHQ+ F ETF      + ++ KLSSAGLI+ ++GR+I+  I     ++ D+D+LYDK+
Sbjct: 74  FDHHQRGFFETFN-----EKYKTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDLLYDKV 128

Query: 216 YEHFVMEIDAIDNGVPV------CDCEPRYSISS-NLSGRVSHINP-WGNQKTDEN-ELC 368
           Y+ FV  +DA DNG+         + EP +  ++ ++ G +S +NP W    +DE+ + C
Sbjct: 129 YKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNWNEDTSDESFDRC 188

Query: 369 -EKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWKSHF 545
             +A + +G  FV  V  Y   W  A+ +V +AID R +V KSG I+   Q   PWK H 
Sbjct: 189 FARASEFIGGVFVTLVRGYGQSWLPAKALVAQAIDERMDVDKSGKIIVLPQ-FCPWKEHL 247

Query: 546 FDL--EKNIKEPSKGSQSDSDDAISPYQMRFVLVSDRD-SWRVQCIPVSEKQGFKNRTGL 716
           ++L  EKNI++                Q+ FVL +D   +WRV  +P++    F+ R GL
Sbjct: 248 YELEREKNIEK----------------QIEFVLFTDSSGAWRVSTVPIN-STSFQFRRGL 290

Query: 717 LEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTL 857
            E  RG+R++EL  KS +PG +F+HA+GFIGG KS +   E+A  +L
Sbjct: 291 PEPLRGLRDEELSTKSGVPGCIFIHAAGFIGGAKSKEAVYELAKMSL 337

>sp|O84391|Y386_CHLTR Hypothetical UPF0160 protein CT386
          Length = 289

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 4/286 (1%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYF-GREILTEICKPYKT 182
           GG +  E  +FDHHQ S+  ++             SSAG++  Y  G   L+        
Sbjct: 55  GGRYSTEHKRFDHHQVSYTGSW-------------SSAGMVLDYLHGLGFLSHD------ 95

Query: 183 TIDMDILYDKMYEHFVMEIDAIDNGVPVCDCEPRYSISSNLSGRVSHINPWGNQKTDENE 362
                  Y+ +    V  +D  DNG      +  +   S++    + +   GN   +   
Sbjct: 96  ------EYEYLNNTLVHGVDEQDNGRFFS--KEGFCSFSDIIKIYNPLEEGGNTDKEFFF 147

Query: 363 LCEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWKSH 542
               A+ L+ +   +K  +   C    R++V++ ++      K  + L+F++    W+ +
Sbjct: 148 ALRFAIDLL-TRLREKFCYDRVC----RDIVKQVME------KESVCLRFDRP-LAWQEN 195

Query: 543 FFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDRDSWRVQCIPVSEKQGFKNRTGLLE 722
           FF L         G +S        +   FV     D W ++ IP +  +  + R    E
Sbjct: 196 FFSL---------GGES--------HPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE 238

Query: 723 EWRGIREDELCNKSRIPGSVFVHASGFIG---GNKSYDGALEMAVK 851
           EW G+  D+L   + IPG++F H   F+      +S + AL + +K
Sbjct: 239 EWAGLLGDQLVQATGIPGAIFCHKGLFLSVWDSQESCEEALNLVLK 284

>sp|Q9Z862|Y489_CHLPN UPF0160 protein CPn0489/CP0265/CPj0489/CpB0509
          Length = 290

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 3/293 (1%)
 Frame = +3

Query: 6   GGVFDPEKNKFDHHQKSFNETFKTLKPEKPWEIKLSSAGLIYVYFGREILTEICKPYKTT 185
           GGV+  E  +FDHHQ S++ ++             SSAG+I  Y  +E     C+ Y   
Sbjct: 55  GGVYSIENKRFDHHQVSYDGSW-------------SSAGMILHYL-KEFGYMDCEEYHF- 99

Query: 186 IDMDILYDKMYEHFVMEIDAIDNGVPVCDCEPRYSISS---NLSGRVSHINPWGNQKTDE 356
                    +    V  +D  DNG        R+       + S  +   NP   ++T+ 
Sbjct: 100 ---------LNNTLVHGVDEQDNG--------RFFSKEGFCSFSDIIKIYNpreEEETNS 142

Query: 357 NELCEKAMKLVGSEFVDKVNFYVNCWWSAREMVQKAIDNRYNVHKSGLILKFEQGGFPWK 536
           +     A+     +F+ ++          R +V++A++         + L F++    W+
Sbjct: 143 DADFSCALHFT-IDFLCRLRKKFQYDRVCRGIVREAMETE------DMCLYFDRP-LAWQ 194

Query: 537 SHFFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDRDSWRVQCIPVSEKQGFKNRTGL 716
            +FF L    K P+                 FV     D W ++ IP +  +  + R   
Sbjct: 195 ENFFFLGGE-KHPAA----------------FVCFPSCDQWILRGIPPNLDRRMEVRVPF 237

Query: 717 LEEWRGIREDELCNKSRIPGSVFVHASGFIGGNKSYDGALEMAVKTLEHSGLL 875
            E W G+   EL   S IPG+VF H   F+    + +        TL+  G++
Sbjct: 238 PENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII 290

>sp|Q9PK08|Y665_CHLMU Hypothetical UPF0160 protein TC0665
          Length = 289

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
 Frame = +3

Query: 483 VHKSGLILKFEQGGFPWKSHFFDLEKNIKEPSKGSQSDSDDAISPYQMRFVLVSDRDSWR 662
           + K  + L+F++    W+ +FF L         G ++        +   FV     D W 
Sbjct: 177 MEKEDVCLRFDRP-LAWQENFFSL---------GGEN--------HPAAFVSFPCSDQWI 218

Query: 663 VQCIPVSEKQGFKNRTGLLEEWRGIREDELCNKSRIPGSVFVHASGFIG---GNKSYDGA 833
           ++ IP +  +  + R    E+W G+  D+L   + IPG++F H   F+      +S + A
Sbjct: 219 LRGIPPTLDRRMEVRIPFPEDWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEA 278

Query: 834 LEMAVK 851
           L + +K
Sbjct: 279 LNLVLK 284

>sp|Q8X598|ARGM_ECO57 Succinylornithine transaminase (Succinylornithine aminotransferase)
          Length = 406

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +3

Query: 336 GNQKTDENELCEKAMKLVGSEFVDKVNFYVNCWWSARE----MVQKAIDNRYNVHKSGLI 503
           GN  T+E+ L   A KL+ + F D+V F+ N    A E    + +K   +RY  HKSG++
Sbjct: 75  GNGYTNESVL-RLAKKLIDATFADRV-FFCNSGAEANEAALKLARKFAHDRYGSHKSGIV 132

>sp|P77581|ARGM_ECOLI Succinylornithine transaminase (Succinylornithine aminotransferase)
           (Carbon starvation protein C)
          Length = 406

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +3

Query: 336 GNQKTDENELCEKAMKLVGSEFVDKVNFYVNCWWSARE----MVQKAIDNRYNVHKSGLI 503
           GN  T+E  L   A KL+ + F D+V F+ N    A E    + +K   +RY  HKSG++
Sbjct: 75  GNGYTNEPVL-RLAKKLIDATFADRV-FFCNSGAEANEAALKLARKFAHDRYGSHKSGIV 132

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,687,191
Number of Sequences: 369166
Number of extensions: 2265377
Number of successful extensions: 5998
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5977
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9952674160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00893

  1. Dr_sW_022_J01
  2. Dr_sW_026_N21
  3. Dr_sW_005_C21