Planaria EST Database

DrC_00777

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00777
         (998 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42637|TPM1_SCHMA  Tropomyosin 1 (TMI) (Polypeptide 49)        304   3e-82
sp|Q26519|TPM_SCHJA  Tropomyosin                                  302   9e-82
sp|Q95PU1|TPM_ECHMU  Tropomyosin                                  301   2e-81
sp|Q26503|TPM_SCHHA  Tropomyosin                                  300   4e-81
sp|P43689|TPM2_BIOGL  Tropomyosin 2 (TMII)                        290   3e-78
sp|O97192|TPM_HELAS  Tropomyosin (Allergen Hel as 1)              287   4e-77
sp|Q23758|TPM_CLOSI  Tropomyosin                                  284   2e-76
sp|Q9GZ71|TPM_HALDV  Tropomyosin                                  282   1e-75
sp|P42638|TPM2_SCHMA  Tropomyosin 2 (TMII)                        278   1e-74
sp|P42636|TPM1_BIOGL  Tropomyosin 1 (TMI) (Bg 39)                 274   3e-73

>sp|P42637|TPM1_SCHMA Tropomyosin 1 (TMI) (Polypeptide 49)
          Length = 284

 Score =  304 bits (778), Expect = 3e-82
 Identities = 166/240 (69%), Positives = 185/240 (77%)
 Frame = +1

Query: 169 ELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQTES 348
           EL   ++ AQ +CDEAQE L E   KLE T+KRAT+AEAEVAA+TRRI+L+E DLE + S
Sbjct: 45  ELNNKMKQAQIDCDEAQETLQEQMNKLEETDKRATNAEAEVAAMTRRIRLLEEDLEVSSS 104

Query: 349 RFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKYDE 528
           R  E   KLE ASK AEESE+ RK LE RSIADDE+L QLE+Q KEAKYIAEDADRKYDE
Sbjct: 105 RLTETLTKLEEASKTAEESERGRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRKYDE 164

Query: 529 VARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYEDT 708
            ARKLAIAEVD ER EARLE  ESK        +VVGNNMK+LEISEQE+AQREESYE+T
Sbjct: 165 AARKLAIAEVDFERAEARLEAAESKIVELEEELRVVGNNMKALEISEQESAQREESYEET 224

Query: 709 IRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELTGY 888
           IRDLTERLK            VSKLQ+EVD LEDDLL+EKE+YKALS ELD  FAELTGY
Sbjct: 225 IRDLTERLKAAEQRATEAERQVSKLQNEVDHLEDDLLAEKERYKALSGELDQTFAELTGY 284

>sp|Q26519|TPM_SCHJA Tropomyosin
          Length = 284

 Score =  302 bits (774), Expect = 9e-82
 Identities = 165/242 (68%), Positives = 185/242 (76%)
 Frame = +1

Query: 163 MQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQT 342
           + EL   ++ AQ +CDE QE L E   KLE TEKRAT+AEA+VAA+TRRI+L+E DLE +
Sbjct: 43  ISELNTKMKQAQIDCDEVQETLQEQMNKLEETEKRATNAEAQVAAMTRRIRLLEEDLEVS 102

Query: 343 ESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKY 522
            SR  E   KLE ASK AEESE+ RK LE RSIADDE+L QLE+Q KEAKYIAEDADRKY
Sbjct: 103 SSRLTETLTKLEEASKTAEESERGRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRKY 162

Query: 523 DEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYE 702
           DE ARKLAIAEVD ER EARLE  ESK        +VVGNNMK+LEISEQE+AQREESYE
Sbjct: 163 DEAARKLAIAEVDFERAEARLEAAESKIVELEEELRVVGNNMKALEISEQESAQREESYE 222

Query: 703 DTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELT 882
           +TIRDLTERLK            VSKLQ+EVD LEDDLL+EKE+YKALS ELD  FAELT
Sbjct: 223 ETIRDLTERLKAAEQRATEAERQVSKLQNEVDHLEDDLLAEKERYKALSGELDQTFAELT 282

Query: 883 GY 888
           GY
Sbjct: 283 GY 284

>sp|Q95PU1|TPM_ECHMU Tropomyosin
          Length = 284

 Score =  301 bits (770), Expect = 2e-81
 Identities = 162/268 (60%), Positives = 195/268 (72%)
 Frame = +1

Query: 85  NAGEKSTSXXXXXXXXXXXXXXXXDAMQELQKSLQTAQQECDEAQEALAEANTKLEATEK 264
           NA EK+ +                + M +    ++  Q E D  QE+L EA +KLE TEK
Sbjct: 17  NALEKAINLENQLKEKAKDFEKKEEEMNDWLSKVKNIQTEVDTVQESLQEAISKLEETEK 76

Query: 265 RATDAEAEVAALTRRIQLIEADLEQTESRFQEASGKLEGASKDAEESEKNRKILETRSIA 444
           RAT+AEAEVAA+TRRI+L+E D EQ+  R  E S KL+ ASK AEESE+NRK LETRSI+
Sbjct: 77  RATNAEAEVAAMTRRIRLLEEDFEQSSGRLTETSTKLDDASKAAEESERNRKTLETRSIS 136

Query: 445 DDEKLAQLEEQVKEAKYIAEDADRKYDEVARKLAIAEVDLERTEARLENCESKTXXXXXX 624
           DDE++AQLEEQVKEAKYIAEDA+RKYDE AR+LA+ EVDLER E+RLE  ESK       
Sbjct: 137 DDERMAQLEEQVKEAKYIAEDAERKYDEAARRLAVTEVDLERAESRLETSESKIVELEEE 196

Query: 625 XKVVGNNMKSLEISEQEAAQREESYEDTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRL 804
            ++VGNNMKSLE+SEQE+ QREESYE+TIRDLTERLK            VSKLQ+EVDRL
Sbjct: 197 LRIVGNNMKSLEVSEQESLQREESYEETIRDLTERLKTAEQRAAEAERQVSKLQNEVDRL 256

Query: 805 EDDLLSEKEKYKALSDELDTAFAELTGY 888
           ED+LLSEKE+Y+A+S ELDT FAELT +
Sbjct: 257 EDELLSEKERYRAISGELDTTFAELTSF 284

>sp|Q26503|TPM_SCHHA Tropomyosin
          Length = 284

 Score =  300 bits (768), Expect = 4e-81
 Identities = 163/240 (67%), Positives = 184/240 (76%)
 Frame = +1

Query: 169 ELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQTES 348
           EL   ++ AQ +CDE QE L E   KLE T+KRAT+AEAEVAA+TRRI+L+E DLE + S
Sbjct: 45  ELNTKMKQAQIDCDEVQETLQEQMNKLEETDKRATNAEAEVAAMTRRIRLLEEDLEVSSS 104

Query: 349 RFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKYDE 528
           R  E   KLE ASK AEESE+ RK LE RSIADDE+L QLE+Q KEAKYIAEDADRKYDE
Sbjct: 105 RLTETLTKLEEASKTAEESERGRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRKYDE 164

Query: 529 VARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYEDT 708
            ARKLAIAEVD +R EARLE  ESK        +V+GNNMK+LEISEQE+AQREESYE+T
Sbjct: 165 AARKLAIAEVDFKRAEARLEAAESKIVELEEELRVIGNNMKALEISEQESAQREESYEET 224

Query: 709 IRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELTGY 888
           IRDLTERLK            VSKLQ+EVD LEDDLL+EKE+YKALS ELD  FAELTGY
Sbjct: 225 IRDLTERLKAAEQRATEAERQVSKLQNEVDHLEDDLLAEKERYKALSGELDQTFAELTGY 284

>sp|P43689|TPM2_BIOGL Tropomyosin 2 (TMII)
          Length = 284

 Score =  290 bits (743), Expect = 3e-78
 Identities = 153/244 (62%), Positives = 182/244 (74%)
 Frame = +1

Query: 157 DAMQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLE 336
           +    LQK     Q + D A E L EA TKLEA+EK   + E++ A L RRIQL+E DLE
Sbjct: 41  EEFNNLQKKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESDTAGLNRRIQLLEEDLE 100

Query: 337 QTESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADR 516
           ++E R Q A+ KLE ASK A+ESE+ RK+LE+RS+ADDE+L  LE Q+KEAKYIAEDA+R
Sbjct: 101 RSEERLQSATEKLEEASKAADESERGRKVLESRSLADDERLDGLEAQLKEAKYIAEDAER 160

Query: 517 KYDEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREES 696
           KYDE ARKLAI EVDLER EARLE  E+K        KVVGNNMKSLEISEQEA+QRE+S
Sbjct: 161 KYDEAARKLAITEVDLERAEARLEAAEAKIIELEEELKVVGNNMKSLEISEQEASQREDS 220

Query: 697 YEDTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAE 876
           YE+TIRDLT+RLK            VSKLQ EVDRLED+LL+EKE+YK++SDELD+ FAE
Sbjct: 221 YEETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDELLAEKERYKSISDELDSTFAE 280

Query: 877 LTGY 888
           L GY
Sbjct: 281 LAGY 284

>sp|O97192|TPM_HELAS Tropomyosin (Allergen Hel as 1)
          Length = 284

 Score =  287 bits (734), Expect = 4e-77
 Identities = 152/242 (62%), Positives = 182/242 (75%)
 Frame = +1

Query: 163 MQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQT 342
           +  LQK     + + D   E L +ANTKLEA+EK+  + E+E A L RRIQL+E DLE++
Sbjct: 43  LNNLQKKFAILENDFDSINEQLLDANTKLEASEKKNAEIESETAGLQRRIQLLEEDLERS 102

Query: 343 ESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKY 522
           E R Q A+ KLE ASK A+ESE+ RK+LE+RS+ADDE+L  LE Q+KEAKYIAEDA+RK+
Sbjct: 103 EERLQSATEKLEEASKAADESERGRKVLESRSLADDERLDGLEAQLKEAKYIAEDAERKF 162

Query: 523 DEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYE 702
           DE ARKLAI EVDLER EARLE  E+K        KVVGNNMKSLEISEQEA+QRE+SYE
Sbjct: 163 DEAARKLAITEVDLERAEARLEAAEAKILELEEELKVVGNNMKSLEISEQEASQREDSYE 222

Query: 703 DTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELT 882
           +TIRDLT+RLK            VSKLQ EVDRLED+LL+EKE+YKA SDELD+ FAEL 
Sbjct: 223 ETIRDLTQRLKDAENRASEAERTVSKLQKEVDRLEDELLAEKERYKATSDELDSTFAELA 282

Query: 883 GY 888
           GY
Sbjct: 283 GY 284

>sp|Q23758|TPM_CLOSI Tropomyosin
          Length = 284

 Score =  284 bits (727), Expect = 2e-76
 Identities = 156/240 (65%), Positives = 178/240 (74%)
 Frame = +1

Query: 169 ELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQTES 348
           EL   ++ AQ E DE QEAL ++  K+E T+KRAT+AEAEVA +TRRI+L+E DLE + S
Sbjct: 45  ELNNRMKQAQTELDEIQEALQDSLNKMEETDKRATNAEAEVARMTRRIRLLEEDLEVSSS 104

Query: 349 RFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKYDE 528
           R  E   K + ASK AEESE+ RK LE RSIADDE L+QLE+Q KE KYIAEDADRKYDE
Sbjct: 105 RLTETLAKFDEASKTAEESERGRKELEIRSIADDEGLSQLEDQQKEGKYIAEDADRKYDE 164

Query: 529 VARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYEDT 708
            ARKLAI EVD ER E+RLE  ESK        +VVGNNMK+LEISEQE+AQREESYE+T
Sbjct: 165 AARKLAIVEVDFERAESRLEAAESKIVELEEELRVVGNNMKALEISEQESAQREESYEET 224

Query: 709 IRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELTGY 888
           IRDLTERLK            VSKLQ+EVD LEDDLLSEK +YK LS  LD  FAELTGY
Sbjct: 225 IRDLTERLKAAEQRAAEAERQVSKLQNEVDHLEDDLLSEKIRYKDLSGGLDQTFAELTGY 284


 Score = 40.4 bits (93), Expect = 0.008
 Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 14/242 (5%)
 Frame = +1

Query: 163 MQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQT 342
           M  ++K +   + E + A E   +   +L+  E+     E E+  L  R++  + +L++ 
Sbjct: 1   MDGIKKKMIAMKLEKENAMERAVQYEAQLKQKEEEQEKKETEIGELNNRMKQAQTELDEI 60

Query: 343 ESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKY 522
           +   Q++  K+E   K A  +E                              AE A    
Sbjct: 61  QEALQDSLNKMEETDKRATNAE------------------------------AEVA---- 86

Query: 523 DEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEI---------SEQE 675
             + R++ + E DLE + +RL    +K        +      K LEI         S+ E
Sbjct: 87  -RMTRRIRLLEEDLEVSSSRLTETLAKFDEASKTAEESERGRKELEIRSIADDEGLSQLE 145

Query: 676 AAQREESY--EDTIRDLTERLKXXXXXXXXXXXXVSKL---QSEVDRLEDDLLSEKEKYK 840
             Q+E  Y  ED  R   E  +             S+L   +S++  LE++L       K
Sbjct: 146 DQQKEGKYIAEDADRKYDEAARKLAIVEVDFERAESRLEAAESKIVELEEELRVVGNNMK 205

Query: 841 AL 846
           AL
Sbjct: 206 AL 207

>sp|Q9GZ71|TPM_HALDV Tropomyosin
          Length = 284

 Score =  282 bits (721), Expect = 1e-75
 Identities = 149/242 (61%), Positives = 178/242 (73%)
 Frame = +1

Query: 163 MQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLEQT 342
           +  LQK     + + D   E L EA  KLE +EKR T+ E EV+  TR+I L+E DLE+ 
Sbjct: 43  LNNLQKKCANLENDFDNVNEQLQEAMAKLETSEKRVTEMEQEVSGTTRKITLLEEDLERN 102

Query: 343 ESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADRKY 522
           E R Q A+ +LE ASK A+ESE+  ++LE+RS+ADDE++ QLE Q+KEAKYIAEDA+RKY
Sbjct: 103 EERLQTATERLEEASKAADESERGARVLESRSLADDERIDQLEAQLKEAKYIAEDAERKY 162

Query: 523 DEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREESYE 702
           DE ARKLAI EVDLER EARLE  E+K        KVVGNNMKSLEISEQEA+QRE+SYE
Sbjct: 163 DEAARKLAITEVDLERAEARLEAAEAKILELEEELKVVGNNMKSLEISEQEASQREDSYE 222

Query: 703 DTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAELT 882
           +TIRDLT+RLK            VSKLQ EVDRLED+LL+EKEKYKA+SDELD  FAEL 
Sbjct: 223 ETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDELLAEKEKYKAISDELDQTFAELA 282

Query: 883 GY 888
           GY
Sbjct: 283 GY 284

>sp|P42638|TPM2_SCHMA Tropomyosin 2 (TMII)
          Length = 284

 Score =  278 bits (712), Expect = 1e-74
 Identities = 145/243 (59%), Positives = 187/243 (76%)
 Frame = +1

Query: 157 DAMQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLE 336
           + + E+ K +Q    + + AQ  LAE NTKLE T+KRAT+AEAEVA+L +RI+ +E +LE
Sbjct: 41  EEVAEVLKKIQQVDTDKETAQTQLAETNTKLEETDKRATEAEAEVASLQKRIRQLEDELE 100

Query: 337 QTESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADR 516
            TE+R QEA+ KLE ASK A+ES++ RK+LE R+ AD+E++ QLEEQ+KE+ ++AEDADR
Sbjct: 101 STETRLQEATVKLEEASKAADESDRGRKVLENRTFADEERINQLEEQLKESTFMAEDADR 160

Query: 517 KYDEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREES 696
           KYDE ARKLAI EV+LER E+RLE  ESK        ++VGNN+KSLEISEQEAAQREE+
Sbjct: 161 KYDEAARKLAITEVELERAESRLEAAESKITELEEELRIVGNNVKSLEISEQEAAQREEA 220

Query: 697 YEDTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAE 876
           YE+ IRDLTERLK            V+ LQ++ DRLED+L++EKEKYKALS+ELD+ FAE
Sbjct: 221 YEENIRDLTERLKAAEDRAQESERLVNTLQADADRLEDELVTEKEKYKALSEELDSTFAE 280

Query: 877 LTG 885
           LTG
Sbjct: 281 LTG 283

>sp|P42636|TPM1_BIOGL Tropomyosin 1 (TMI) (Bg 39)
          Length = 284

 Score =  274 bits (700), Expect = 3e-73
 Identities = 142/244 (58%), Positives = 176/244 (72%)
 Frame = +1

Query: 157 DAMQELQKSLQTAQQECDEAQEALAEANTKLEATEKRATDAEAEVAALTRRIQLIEADLE 336
           +    LQ      Q + D A E L EA TKLEA+EK   + E++ A L RRIQL+E DLE
Sbjct: 41  EEFNNLQNKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESDTAGLNRRIQLLEEDLE 100

Query: 337 QTESRFQEASGKLEGASKDAEESEKNRKILETRSIADDEKLAQLEEQVKEAKYIAEDADR 516
           ++E R Q A+ KLE ASK A+ESE+ RK+LE+RS+ADDE+L  LE Q+KEAKYIAEDA+R
Sbjct: 101 RSEERLQSATEKLEEASKAADESERGRKVLESRSLADDERLDGLEAQLKEAKYIAEDAER 160

Query: 517 KYDEVARKLAIAEVDLERTEARLENCESKTXXXXXXXKVVGNNMKSLEISEQEAAQREES 696
           KYDE ARKLAI EVDLER EARLE  E+K         +VGNN+K+L I   +A+QRE+S
Sbjct: 161 KYDEAARKLAITEVDLERAEARLEAAEAKVWELDEELHIVGNNIKTLSIQNDQASQREDS 220

Query: 697 YEDTIRDLTERLKXXXXXXXXXXXXVSKLQSEVDRLEDDLLSEKEKYKALSDELDTAFAE 876
           Y++TIRDLT+RLK            VSKLQ EVDRLED+LL+EKE+YK++SDELD+ FAE
Sbjct: 221 YQETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDELLAEKERYKSISDELDSTFAE 280

Query: 877 LTGY 888
           L GY
Sbjct: 281 LAGY 284

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.316    0.130    0.335 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,036,386
Number of Sequences: 369166
Number of extensions: 871448
Number of successful extensions: 6548
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6067
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10574716295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00777

  1. Dr_sW_020_B06
  2. Dr_sW_026_G07
  3. Dr_sW_028_L01