Planaria EST Database

DrC_00718

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00718
         (1388 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P24346|AN3_XENLA  Putative ATP-dependent RNA helicase An3      423   e-118
sp|O00571|DDX3X_HUMAN  DEAD-box protein 3, X-chromosomal (He...   421   e-117
sp|O15523|DDX3Y_HUMAN  DEAD-box protein 3, Y-chromosomal          420   e-117
sp|Q5RF43|DDX3Y_PONPY  DEAD-box protein 3, Y-chromosomal          420   e-117
sp|Q62167|DDX3X_MOUSE  DEAD-box protein 3, X-chromosomal (DE...   419   e-117
sp|P16381|PL10_MOUSE  Putative ATP-dependent RNA helicase PL10    419   e-116
sp|Q6GVM6|DDX3Y_PANTR  DEAD-box protein 3, Y-chromosomal          419   e-116
sp|Q62095|DDX3Y_MOUSE  DEAD-box protein 3, Y-chromosomal (DE...   417   e-116
sp|O13370|DED1_SCHPO  ATP-dependent RNA helicase ded1             375   e-103
sp|P24784|DBP1_YEAST  Probable ATP-dependent RNA helicase DB...   374   e-103

>sp|P24346|AN3_XENLA Putative ATP-dependent RNA helicase An3
          Length = 697

 Score =  423 bits (1088), Expect = e-118
 Identities = 227/353 (64%), Positives = 261/353 (73%), Gaps = 4/353 (1%)
 Frame = +2

Query: 53   MNH-QISGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQI 223
            M H Q +G Y   KQ+P++L+LAPTRELA QIYEE RKF+YRS+VR CVVYGGADI +QI
Sbjct: 292  MKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQI 351

Query: 224  YNLSRGCNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDM 403
             +L RGC+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  M
Sbjct: 352  RDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 411

Query: 404  PYVGDRQTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNH 583
            P  G RQT+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++EE  KR+ 
Sbjct: 412  PPKGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSF 471

Query: 584  LLQILTNLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDG 763
            LL +L     D L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G
Sbjct: 472  LLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 531

Query: 764  SSPILVATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXX 943
             SPILVATAVAARGLDI NVK VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+   
Sbjct: 532  KSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNI 591

Query: 944  XXXXXXXXXXEEAQQEVPGWLYEKLNELKHIKQFRSQQKMA-PKRFGGKDYRQ 1099
                       EA+QEVP WL     E  H    R + K      FG KDYRQ
Sbjct: 592  NITKDLLDLLVEAKQEVPSWLENMAYEQHHKSSSRGRSKSRFSGGFGAKDYRQ 644

>sp|O00571|DDX3X_HUMAN DEAD-box protein 3, X-chromosomal (Helicase-like protein 2) (HLP2)
            (DEAD-box, X isoform)
          Length = 662

 Score =  421 bits (1081), Expect = e-117
 Identities = 224/348 (64%), Positives = 258/348 (74%), Gaps = 4/348 (1%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGADI +QI +L RG
Sbjct: 257  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 316

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 317  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 376

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++EE  KR+ LL +L 
Sbjct: 377  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLN 436

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
                D L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 437  ATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 496

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NVK VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 497  ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556

Query: 962  XXXXEEAQQEVPGWLYEKLNE--LKHIKQFRSQQKMAPKRFGGKDYRQ 1099
                 EA+QEVP WL     E   K   + RS+       FG +DYRQ
Sbjct: 557  LDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQ 604

>sp|O15523|DDX3Y_HUMAN DEAD-box protein 3, Y-chromosomal
          Length = 660

 Score =  420 bits (1080), Expect = e-117
 Identities = 225/349 (64%), Positives = 261/349 (74%), Gaps = 5/349 (1%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGADI +QI +L RG
Sbjct: 255  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 314

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 315  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 374

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++E+  KR+ LL IL 
Sbjct: 375  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILG 434

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
               SD L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 435  ATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 494

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NV+ VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 495  ATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 554

Query: 962  XXXXEEAQQEVPGWLYEKLNELKHIK---QFRSQQKMAPKRFGGKDYRQ 1099
                 EA+QEVP WL E +    H K   + RS+       FG +DYRQ
Sbjct: 555  LDLLVEAKQEVPSWL-ENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQ 602

>sp|Q5RF43|DDX3Y_PONPY DEAD-box protein 3, Y-chromosomal
          Length = 658

 Score =  420 bits (1079), Expect = e-117
 Identities = 221/346 (63%), Positives = 257/346 (74%), Gaps = 2/346 (0%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGADI +QI +L RG
Sbjct: 255  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 314

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 315  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 374

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++E+  KR+ LL +L 
Sbjct: 375  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLG 434

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
                D L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 435  ATGRDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 494

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NV+ VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 495  ATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 554

Query: 962  XXXXEEAQQEVPGWLYEKLNELKHIKQFRSQQKMAPKRFGGKDYRQ 1099
                 EA+QEVP WL     E  +    R + K     FG +DYRQ
Sbjct: 555  LDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKRFSGGFGARDYRQ 600

>sp|Q62167|DDX3X_MOUSE DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase DEAD3)
            (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related
            sequence 2)
          Length = 662

 Score =  419 bits (1078), Expect = e-117
 Identities = 223/348 (64%), Positives = 258/348 (74%), Gaps = 4/348 (1%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGA+I +QI +L RG
Sbjct: 257  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERG 316

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 317  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 376

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++EE  KR+ LL +L 
Sbjct: 377  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLN 436

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
                D L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 437  ATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 496

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NVK VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 497  ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556

Query: 962  XXXXEEAQQEVPGWLYEKLNE--LKHIKQFRSQQKMAPKRFGGKDYRQ 1099
                 EA+QEVP WL     E   K   + RS+       FG +DYRQ
Sbjct: 557  LDLLVEAKQEVPSWLENMAFEHHYKGSSRGRSKSSRFSGGFGARDYRQ 604

>sp|P16381|PL10_MOUSE Putative ATP-dependent RNA helicase PL10
          Length = 660

 Score =  419 bits (1077), Expect = e-116
 Identities = 223/347 (64%), Positives = 258/347 (74%), Gaps = 3/347 (0%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGADI +QI +L RG
Sbjct: 256  NGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 315

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 316  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 375

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++EE  KR+ LL +L 
Sbjct: 376  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLN 435

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
                D L+L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 436  ATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 495

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NVK VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 496  ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 555

Query: 962  XXXXEEAQQEVPGWLYEKLNELKHIKQFRSQQKMA-PKRFGGKDYRQ 1099
                 EA+QEVP WL     E  +    R + K      FG +DYRQ
Sbjct: 556  LDLLVEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQ 602

>sp|Q6GVM6|DDX3Y_PANTR DEAD-box protein 3, Y-chromosomal
          Length = 660

 Score =  419 bits (1077), Expect = e-116
 Identities = 224/350 (64%), Positives = 262/350 (74%), Gaps = 6/350 (1%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGADI +QI +L RG
Sbjct: 255  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 314

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 315  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 374

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++E+  KR+ LL IL 
Sbjct: 375  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILG 434

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
               +D L L+FVETKKGA  LE+FL    +  TSIHGDR Q +RE AL  F+ G SPILV
Sbjct: 435  AAGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILV 494

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NV+ VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 495  ATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDL 554

Query: 962  XXXXEEAQQEVPGWL----YEKLNELKHIKQFRSQQKMAPKRFGGKDYRQ 1099
                 EA+QEVP WL    YE  ++ K   + RS+       FG +DYRQ
Sbjct: 555  LDLLVEAKQEVPSWLENMAYE--HQYKGGSRGRSKSNRFSGGFGARDYRQ 602

>sp|Q62095|DDX3Y_MOUSE DEAD-box protein 3, Y-chromosomal (DEAD-box RNA helicase DEAD2)
            (mDEAD2) (D1Pas1-related sequence 1)
          Length = 658

 Score =  417 bits (1072), Expect = e-116
 Identities = 222/347 (63%), Positives = 255/347 (73%), Gaps = 3/347 (0%)
 Frame = +2

Query: 68   SGNY--EKQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRG 241
            +G Y   KQYP++L+LAPTRELA QIYEE RKFSYRS+VR CVVYGGAD  +QI +L RG
Sbjct: 256  NGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERG 315

Query: 242  CNLLVATPGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDR 421
            C+LLVATPGRL+DMM+R KIGL++ +YLVLDEADRMLDMGFEPQIR+IVE+  MP  G R
Sbjct: 316  CHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 375

Query: 422  QTLMFSATFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILT 601
             T+MFSATFPKEIQ LA DFL+ YIFLAVG VGS+S NITQ V+++EE  KR+ LL +L 
Sbjct: 376  HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLN 435

Query: 602  NLKSDDLVLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILV 781
                D L L+FVETKKGA  LENFL    +  TSIHGDR Q +RE AL  F+ G  PILV
Sbjct: 436  ATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILV 495

Query: 782  ATAVAARGLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXX 961
            ATAVAARGLDI NVK VINFDLPSDIEEYVHRIGRTGRVGN G + SFFN+         
Sbjct: 496  ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 555

Query: 962  XXXXEEAQQEVPGWLYEKLNELKHIKQFRSQQKMA-PKRFGGKDYRQ 1099
                 EA+QEVP WL     E  +    R + K      FG +DYRQ
Sbjct: 556  LDLLVEAKQEVPSWLESMAYEHHYKGSSRGRSKSRFSGGFGARDYRQ 602

>sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1
          Length = 636

 Score =  375 bits (962), Expect = e-103
 Identities = 191/314 (60%), Positives = 234/314 (74%)
 Frame = +2

Query: 83   KQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRGCNLLVAT 262
            K YP  LILAPTREL CQI+EE+RKF YRS VR C VYGGADI  QI  + +GC+LL AT
Sbjct: 253  KAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSAT 312

Query: 263  PGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDRQTLMFSA 442
            PGRL+D++ R +I L  I++LVLDEADRMLDMGFEPQIR IVE +DM  V +RQTLMFSA
Sbjct: 313  PGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSA 372

Query: 443  TFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILTNLKSDDL 622
            TFP++IQ LA DFL  Y+FL+VG VGS+S NITQ V+++E+  KR++LL IL  L  + L
Sbjct: 373  TFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGL 432

Query: 623  VLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILVATAVAAR 802
             LIFVETK+ A  L ++LL  +FP TSIHGDR Q ERE AL+ F+ G + I+VATAVA+R
Sbjct: 433  TLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASR 492

Query: 803  GLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXXXXXXEEA 982
            GLDIPNV  VIN+DLP+DI++YVHRIGRTGR GN G++V+FFN              +EA
Sbjct: 493  GLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEA 552

Query: 983  QQEVPGWLYEKLNE 1024
             QE P +L     E
Sbjct: 553  NQECPSFLIAMARE 566

>sp|P24784|DBP1_YEAST Probable ATP-dependent RNA helicase DBP1 (Helicase CA1)
          Length = 617

 Score =  374 bits (961), Expect = e-103
 Identities = 195/308 (63%), Positives = 233/308 (75%)
 Frame = +2

Query: 83   KQYPVALILAPTRELACQIYEETRKFSYRSQVRSCVVYGGADINKQIYNLSRGCNLLVAT 262
            K YP AL+LAPTRELA QI+EE RKF+YRS VR CVVYGGA I  Q+  + RGC+LLVAT
Sbjct: 235  KGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294

Query: 263  PGRLIDMMKRNKIGLEYIRYLVLDEADRMLDMGFEPQIRQIVEESDMPYVGDRQTLMFSA 442
            PGRL D+++R K+ L  I+YLVLDEADRMLDMGFEPQIR IVEE DMP V +RQTLMFSA
Sbjct: 295  PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSA 354

Query: 443  TFPKEIQHLATDFLNYYIFLAVGIVGSSSHNITQHVIYIEEFRKRNHLLQILTNLKSDDL 622
            TFP +IQHLA DFL+ YIFL+VG VGS+S NITQ ++Y+++  K++ LL +L + +   L
Sbjct: 355  TFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL-SAEHKGL 413

Query: 623  VLIFVETKKGARQLENFLLTRDFPVTSIHGDRKQLEREAALKCFKDGSSPILVATAVAAR 802
             LIFVETK+ A QL +FL+ ++F  T+IHGDR Q ERE AL  FK   + ILVATAVAAR
Sbjct: 414  TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAAR 473

Query: 803  GLDIPNVKLVINFDLPSDIEEYVHRIGRTGRVGNPGESVSFFNDXXXXXXXXXXXXXEEA 982
            GLDIPNV  VIN+DLPSDI++YVHRIGRTGR GN G + SFFN               EA
Sbjct: 474  GLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEA 533

Query: 983  QQEVPGWL 1006
             QEVP +L
Sbjct: 534  NQEVPTFL 541

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,271,888
Number of Sequences: 369166
Number of extensions: 3220822
Number of successful extensions: 8811
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8320
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16458726120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00718

  1. Dr_sW_018_M06
  2. Dr_sW_028_N09
  3. Dr_sW_008_H23