DrC_00693
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00693 (786 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q5RE33|DP1_PONPY Polyposis locus protein 1 homolog 176 8e-44 sp|Q60870|DP1_MOUSE Polyposis locus protein 1 homolog (TB2 ... 173 5e-43 sp|Q4WTW3|YOP1_ASPFU Protein yopA 111 2e-24 sp|Q871R7|YOP1_NEUCR Protein yop-1 109 7e-24 sp|Q4P0H0|YOP1_USTMA Protein YOP1 107 4e-23 sp|Q6CP93|YOP1_KLULA Protein YOP1 106 6e-23 sp|Q51VY4|YOP1_MAGGR Protein YOP1 105 1e-22 sp|Q9UU91|YOP1_SCHPO Protein yop1 103 4e-22 sp|Q6BWH8|YOP1_DEBHA Protein YOP1 101 2e-21 sp|Q6FMU3|YOP1_CANGA Protein YOP1 101 3e-21
>sp|Q5RE33|DP1_PONPY Polyposis locus protein 1 homolog Length = 189 Score = 176 bits (445), Expect = 8e-44 Identities = 83/175 (47%), Positives = 119/175 (68%) Frame = +3 Query: 63 KEKLEIYLNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFL 242 +E+ + +L++KN TD L ++E KT V + ++A+G+I V YL+FGY L N IGF Sbjct: 6 RERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCNLIGFG 65 Query: 243 FPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLM 422 +PAY SIKAIE+P K+DDT+WLTYWVVY FS+ E +DIFLSW P Y +LKC FL++ M Sbjct: 66 YPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFLLWCM 125 Query: 423 VPTKWNGSIYIYYSFIRPYILKNQTKIDQVLSKTTNATKDIFNKVSETGEAYVKE 587 P+ NG+ +Y IRP+ LK+++++D V+ KD+ +K ET +A KE Sbjct: 126 APSPSNGAELLYKRIIRPFFLKHESQVDSVV-------KDLKDKAKETADAITKE 173
>sp|Q60870|DP1_MOUSE Polyposis locus protein 1 homolog (TB2 protein homolog) (GP106) Length = 185 Score = 173 bits (438), Expect = 5e-43 Identities = 81/175 (46%), Positives = 119/175 (68%) Frame = +3 Query: 63 KEKLEIYLNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFL 242 +E+ + +L++KN TD L ++E KT V + ++A+G+I V YL+FGY L N IGF Sbjct: 2 RERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCNLIGFG 61 Query: 243 FPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLM 422 +PAY S+KAIE+P KDDDT+WLTYWVVY FS+ E +D+FLSW+P Y +LKC FL++ M Sbjct: 62 YPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWLPFYYMLKCGFLLWCM 121 Query: 423 VPTKWNGSIYIYYSFIRPYILKNQTKIDQVLSKTTNATKDIFNKVSETGEAYVKE 587 P+ NG+ +Y IRP L++++++D V+ KD+ +K ET +A KE Sbjct: 122 APSPANGAEMLYRRIIRPIFLRHESQVDSVV-------KDVKDKAKETADAISKE 169
>sp|Q4WTW3|YOP1_ASPFU Protein yopA Length = 169 Score = 111 bits (278), Expect = 2e-24 Identities = 52/133 (39%), Positives = 85/133 (63%) Frame = +3 Query: 84 LNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFLFPAYWSI 263 L+K+ + LN +E +T V K+Y+ +GL+ + F AG+FL NF GFL P Y+S+ Sbjct: 15 LDKELSKYPVLNNLERQTSVPKVYVILGLVGIYTFLVFFNIAGEFLVNFAGFLIPGYYSL 74 Query: 264 KAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLMVPTKWNG 443 A+ T K DDT+WLTYWVVYA +++ES + W P Y + K V ++++ +P + NG Sbjct: 75 NALFTSGKADDTQWLTYWVVYALLTVVESAINA-AYWFPFYYIFKFVLILWMSLP-QTNG 132 Query: 444 SIYIYYSFIRPYI 482 + +++SF++P + Sbjct: 133 AQVVFHSFLQPVL 145
>sp|Q871R7|YOP1_NEUCR Protein yop-1 Length = 168 Score = 109 bits (273), Expect = 7e-24 Identities = 54/131 (41%), Positives = 82/131 (62%) Frame = +3 Query: 84 LNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFLFPAYWSI 263 L+K+ + LN +E+ T V K Y IGL+ +IF GQ L N GF+ P Y+S+ Sbjct: 15 LDKELSKYPTLNNLEKTTGVPKAYAVIGLVALYFFLIIFNLGGQLLTNLAGFVLPGYYSL 74 Query: 264 KAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLMVPTKWNG 443 A+ T +K DDT+WLTYWVV++ F+++ES+ + + W P Y K VFL++L +PT + G Sbjct: 75 NALFTASKQDDTQWLTYWVVFSLFTVIESLISV-VYWFPFYFTFKFVFLLWLSLPT-FKG 132 Query: 444 SIYIYYSFIRP 476 + I+ SF+ P Sbjct: 133 AETIFRSFLAP 143
>sp|Q4P0H0|YOP1_USTMA Protein YOP1 Length = 172 Score = 107 bits (267), Expect = 4e-23 Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Frame = +3 Query: 63 KEKLEIY---LNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFI 233 ++K+E + ++K+ + L + E+ V K Y A+G ++ F A FL N + Sbjct: 9 QQKVEYFVAQIDKELSRYPALKKFEQTVPVPKAYAALGAFGIFTLFVFFNIAAGFLTNLL 68 Query: 234 GFLFPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLI 413 GF PAY+S+KA+E+P DD +WLTYWVV+ F+ LE+ +I L +IP Y +K + ++ Sbjct: 69 GFFVPAYFSLKALESPQPQDDIQWLTYWVVFGLFTFLETFINIVLYYIPWYYTIKTLAIV 128 Query: 414 YLMVPTKWNGSIYIYYSFIRPYILKNQTKIDQVLSKTTNA 533 +LM+P + G+ +Y IRP L Q + Q + T A Sbjct: 129 WLMLP-QTQGAKMVYSRIIRPVFLTTQKTVHQANASTPAA 167
>sp|Q6CP93|YOP1_KLULA Protein YOP1 Length = 180 Score = 106 bits (265), Expect = 6e-23 Identities = 50/147 (34%), Positives = 92/147 (62%), Gaps = 2/147 (1%) Frame = +3 Query: 45 EYFNTYKEKLEIYLNKKNAFTDFLNQVEEKTKVKKIYMAIGLIT--FVIGYLIFGYAGQF 218 +Y +++ L+ L+ K A L+++E +TK+ + Y+ +GL+ F++ ++ G G+ Sbjct: 3 DYLKLFQDSLK-GLDTKFAGNQILSRIEAQTKLPRSYVIVGLVAVYFLLIFINVGGIGEI 61 Query: 219 LANFIGFLFPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLK 398 L+NF+GF P Y+S+KA++T DDT+ LTYW+V++ S++E + L W+P Y K Sbjct: 62 LSNFVGFCIPTYYSLKALKTATSTDDTQLLTYWIVFSFLSVIEFWSKAILYWVPFYWFFK 121 Query: 399 CVFLIYLMVPTKWNGSIYIYYSFIRPY 479 VFL+Y+ +P+ + G+ +Y I P+ Sbjct: 122 TVFLLYIAIPS-FGGAQLVYTRLISPF 147
>sp|Q51VY4|YOP1_MAGGR Protein YOP1 Length = 170 Score = 105 bits (263), Expect = 1e-22 Identities = 53/146 (36%), Positives = 86/146 (58%), Gaps = 4/146 (2%) Frame = +3 Query: 114 LNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFLFPAYWSIKAIETPAKDD 293 LN +E T V K Y +G++ ++F GQ L N GF PAY+S+ A+ + K+D Sbjct: 25 LNNLERTTGVPKAYAVVGVVVLYFFLIVFNLGGQLLTNIAGFGIPAYYSLDALFSANKED 84 Query: 294 DTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLMVPTKWNGSIYIYYSFIR 473 DT+WLTYWVV+A F+++ES+ + + W P Y + K VFL++L +P + G+ I+ SF+ Sbjct: 85 DTQWLTYWVVFAMFTVVESLVSV-VYWFPFYYMFKFVFLLWLSLPA-FKGADIIFRSFLA 142 Query: 474 P----YILKNQTKIDQVLSKTTNATK 539 P Y + ++ + +K +A K Sbjct: 143 PTLSRYFVHSRPASSNLRAKADSAGK 168
>sp|Q9UU91|YOP1_SCHPO Protein yop1 Length = 182 Score = 103 bits (258), Expect = 4e-22 Identities = 57/157 (36%), Positives = 93/157 (59%) Frame = +3 Query: 63 KEKLEIYLNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIFGYAGQFLANFIGFL 242 K+ ++ N+ AF LN +E+ V K+Y+ + +L + G L N + F Sbjct: 8 KQNMQDLDNRLAAFPQ-LNSLEKNFGVSKLYVFLTAAGIYALFLFLNWGGFLLTNLLAFA 66 Query: 243 FPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLM 422 PA++SI AIET K DDT+WLTY++V + +++E + + L ++P+Y LLK +FLI+L Sbjct: 67 MPAFFSINAIETTNKADDTQWLTYYLVTSFLNVIEYWSQLILYYVPVYWLLKAIFLIWLA 126 Query: 423 VPTKWNGSIYIYYSFIRPYILKNQTKIDQVLSKTTNA 533 +P K+NG+ IY IRPYI + +I + +S+ A Sbjct: 127 LP-KFNGATIIYRHLIRPYITPHVIRICKSVSRQNAA 162
>sp|Q6BWH8|YOP1_DEBHA Protein YOP1 Length = 177 Score = 101 bits (252), Expect = 2e-21 Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%) Frame = +3 Query: 42 MEYFNTYKEKLEIYLNKKNAFTDFLNQVEEKTKVKKIYMAIGL--ITFVIGYLIFGYAGQ 215 M Y N K L +++K L Q E KT + + Y +G + FV+ +L G GQ Sbjct: 1 MSYQNQAKSFLST-IDEKTKDLQILRQFELKTGLPRSYAILGGFGLYFVLIFLNIGGVGQ 59 Query: 216 FLANFIGFLFPAYWSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALL 395 L+N G + P Y+S+ A+E+ DDT+ LTYWVV+A F+++E + L WIP Y L Sbjct: 60 LLSNIAGLVIPGYFSLLALESTTTSDDTQLLTYWVVFATFNVVEFWSKAILYWIPFYYLF 119 Query: 396 KCVFLIYLMVPTKWNGSIYIYYSFIRPYILKNQTKIDQVLSKTTNATKDIFNKV 557 K VFL+Y+ +P+ G++ +Y + I+P+ + + NA + + + V Sbjct: 120 KTVFLVYIGIPST-GGAVTVYNAAIKPFSRRYIVNNKKFAQDINNAAQGVSSSV 172
>sp|Q6FMU3|YOP1_CANGA Protein YOP1 Length = 177 Score = 101 bits (251), Expect = 3e-21 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 9/160 (5%) Frame = +3 Query: 84 LNKKNAFTDFLNQVEEKTKVKKIYMAIGLITFVIGYLIF---GYAGQFLANFIGFLFPAY 254 L+ K A + LNQ+E++T + K Y+ +G F + LIF G G+ L NF GF+ PAY Sbjct: 15 LDTKFAGNNVLNQLEQRTNLPKSYLVVGSTIFYL-LLIFINVGGIGEILGNFAGFVIPAY 73 Query: 255 WSIKAIETPAKDDDTKWLTYWVVYAAFSLLESVTDIFLSWIPLYALLKCVFLIYLMVPTK 434 +SI A++T DDT+ LTYW+V++ +++E + L IP Y LK +FL+Y+ +P + Sbjct: 74 YSILALKTTTTKDDTQLLTYWIVFSFLNVIEFWSKALLYIIPFYWFLKTIFLLYIALP-Q 132 Query: 435 WNGSIYIYYSFIRP----YIL--KNQTKIDQVLSKTTNAT 536 G+ IY FI P YIL K + Q + + + AT Sbjct: 133 TGGATMIYNRFISPLTDKYILGPKKTDGVQQSVKEASRAT 172
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,077,165
Number of Sequences: 369166
Number of extensions: 1919506
Number of successful extensions: 5579
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5555
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
