Planaria EST Database

DrC_00691

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00691
         (1362 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BYG5|PAR6B_HUMAN  Partitioning defective 6 homolog beta...   228   4e-59
sp|Q9JK83|PAR6B_MOUSE  Partitioning defective 6 homolog beta...   227   5e-59
sp|Q9JK84|PAR6G_MOUSE  Partitioning defective 6 homolog gamm...   219   1e-56
sp|Q9BYG4|PAR6G_HUMAN  Partitioning defective 6 homolog gamm...   214   4e-55
sp|Q9NAN2|PAR6_CAEEL  Partitioning defective 6 protein            206   1e-52
sp|Q9NPB6|PAR6A_HUMAN  Partitioning defective 6 homolog alph...   202   1e-51
sp|Q9Z101|PAR6A_MOUSE  Partitioning defective 6 homolog alph...   200   9e-51
sp|Q6B4M5|PAR6A_RAT  Partitioning defective 6 homolog alpha ...   200   9e-51
sp|Q5RDQ2|MPP5_PONPY  MAGUK p55 subfamily member 5                 56   3e-07
sp|Q9JLB2|MPP5_MOUSE  MAGUK p55 subfamily member 5 (Protein ...    55   5e-07

>sp|Q9BYG5|PAR6B_HUMAN Partitioning defective 6 homolog beta (PAR-6 beta) (PAR-6B)
          Length = 372

 Score =  228 bits (580), Expect = 4e-59
 Identities = 122/235 (51%), Positives = 160/235 (68%), Gaps = 1/235 (0%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKF AEFRRF +  +    FE+F  LL ++HK+ N+D ++ Y D +   LLPINNDD
Sbjct: 18  EVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDD 76

Query: 181 NYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVPVSKIISAMNEKRSNHSNISIL 360
           NY++A+S     LRI IQ+K E+     G   +++ K  ++ ++   N ++  H  IS+ 
Sbjct: 77  NYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVLRPDNHRKKPHIVISMP 136

Query: 361 DDFXXXXXXXXXXXXPVAYRRVKLMR-NSSKPLGFYIRDGVSVRATPNGIEKVQAIFISR 537
            DF            P  +RRV+L +  + KPLGFYIRDG SVR TP+G+EKV  IFISR
Sbjct: 137 QDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISR 196

Query: 538 LIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           L+  GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ
Sbjct: 197 LVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251

>sp|Q9JK83|PAR6B_MOUSE Partitioning defective 6 homolog beta (PAR-6 beta) (PAR-6B)
          Length = 371

 Score =  227 bits (579), Expect = 5e-59
 Identities = 123/235 (52%), Positives = 159/235 (67%), Gaps = 1/235 (0%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKF AEFRRF +  +    FE+F  LL ++HK+ N+D ++ Y D +   L PINNDD
Sbjct: 18  EVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLPPINNDD 76

Query: 181 NYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVPVSKIISAMNEKRSNHSNISIL 360
           NY++A+S     LRI IQ+K E+     G   ++R K  +S ++   N ++  H  IS+ 
Sbjct: 77  NYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIRKKNMLSNVLRPDNHRKKPHIVISMP 136

Query: 361 DDFXXXXXXXXXXXXPVAYRRVKLMR-NSSKPLGFYIRDGVSVRATPNGIEKVQAIFISR 537
            DF            P  +RRV+L +  + KPLGFYIRDG SVR TP+G+EKV  IFISR
Sbjct: 137 QDFRPVSSIIDVDILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISR 196

Query: 538 LIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           L+  GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ
Sbjct: 197 LVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251

>sp|Q9JK84|PAR6G_MOUSE Partitioning defective 6 homolog gamma (PAR-6 gamma) (PAR6A)
          Length = 382

 Score =  219 bits (558), Expect = 1e-56
 Identities = 125/238 (52%), Positives = 157/238 (65%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKF AEFRRF ++      FEDF  L+ + H +SN +  I Y D +   LLPINNDD
Sbjct: 20  EVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINNDD 78

Query: 181 NYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVPVSKIISAMNE---KRSNHSNI 351
           N+ +A+S     LR+ IQ++ E+     G G + R K    K++  + +   +R  H NI
Sbjct: 79  NFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKK----KVLVTLRDDGLRRRPHLNI 134

Query: 352 SILDDFXXXXXXXXXXXXPVAYRRVKLMRNS-SKPLGFYIRDGVSVRATPNGIEKVQAIF 528
           S+  DF            P  +RRV+L R+   KPLGFYIRDG SVR TP+G+EKV  IF
Sbjct: 135 SMPHDFRPVSSIIDVDILPETHRRVRLYRHGYEKPLGFYIRDGTSVRVTPHGLEKVPGIF 194

Query: 529 ISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           ISR++  GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKP NQ
Sbjct: 195 ISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252

>sp|Q9BYG4|PAR6G_HUMAN Partitioning defective 6 homolog gamma (PAR-6 gamma) (PAR6D)
          Length = 376

 Score =  214 bits (546), Expect = 4e-55
 Identities = 123/238 (51%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKF AEFRRF ++      FEDF  L+ + H +SN D  I Y D +   LLPINNDD
Sbjct: 20  EVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVH-GDLLPINNDD 78

Query: 181 NYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVPVSKIISAMNE---KRSNHSNI 351
           N+ +A+S     LR+ IQ++ E+     G G + R +    + + A+ +   +R  H +I
Sbjct: 79  NFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRR----RALGALRDEGPRRRAHLDI 134

Query: 352 SILDDFXXXXXXXXXXXXPVAYRRVKLMRNS-SKPLGFYIRDGVSVRATPNGIEKVQAIF 528
            +  DF            P  +RRV+L R+   KPLGFYIRDG SVR TP+G+EKV  IF
Sbjct: 135 GLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIF 194

Query: 529 ISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           ISR++  GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKP NQ
Sbjct: 195 ISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252

>sp|Q9NAN2|PAR6_CAEEL Partitioning defective 6 protein
          Length = 309

 Score =  206 bits (525), Expect = 1e-52
 Identities = 120/243 (49%), Positives = 158/243 (65%), Gaps = 4/243 (1%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHS--SFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINN 174
           ++KSKFD+E+RRF I +   S  S++ F+ L+  +H L ++ F + Y +     LLPI N
Sbjct: 16  QVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITN 74

Query: 175 DDNYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVP-VSKIISAMNEKRSNHSNI 351
           DDN  ++       LR++IQR+GES+ E +GYG     +   +S +++    KRS   +I
Sbjct: 75  DDNLRKSFESARPLLRLLIQRRGESWEEKYGYGTDSDKRWKGISSLMAQKPPKRSY--SI 132

Query: 352 SILDDFXXXXXXXXXXXXPVAYRRVKLMRNSS-KPLGFYIRDGVSVRATPNGIEKVQAIF 528
           S  +DF            P A+RRV+L ++   +PLGFYIRDG SVR T  G+ KV  IF
Sbjct: 133 SNPEDFRQVSAIIDVDIVPEAHRRVRLCKHGQERPLGFYIRDGTSVRVTERGVVKVSGIF 192

Query: 529 ISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNT 708
           ISRL+  GLAESTGLL VNDEV+EVNGIEV GKTLDQVTDMMVAN+ NLIITVKP NQ  
Sbjct: 193 ISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKPANQRN 252

Query: 709 CLA 717
            L+
Sbjct: 253 TLS 255

>sp|Q9NPB6|PAR6A_HUMAN Partitioning defective 6 homolog alpha (PAR-6 alpha) (PAR-6A)
           (PAR-6) (PAR6C) (Tax interaction protein 40) (TIP-40)
          Length = 346

 Score =  202 bits (515), Expect = 1e-51
 Identities = 113/236 (47%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKFDAEFRRF +  A  S F++F  LL  +H++  +D ++ Y D +   LLP+ NDD
Sbjct: 17  EVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDD 75

Query: 181 NYNRALSLKMRPLRIIIQRKGESYGELHGYGPIVRSKVPVSKIISAMNEKRSNHSN-ISI 357
           + +RAL+    PLR+++Q++ E+      +      +     ++  +   R+     IS+
Sbjct: 76  SLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGLLLRPVAPLRTRPPLLISL 135

Query: 358 LDDFXXXXXXXXXXXXPVAYRRVKLMRNSS-KPLGFYIRDGVSVRATPNGIEKVQAIFIS 534
             DF            P  +RRV+L ++ S +PLGFYIRDG+SVR  P G+E+V  IFIS
Sbjct: 136 PQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFIS 195

Query: 535 RLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           RL+  GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ
Sbjct: 196 RLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251

>sp|Q9Z101|PAR6A_MOUSE Partitioning defective 6 homolog alpha (PAR-6 alpha) (PAR-6A)
           (PAR-6)
          Length = 346

 Score =  200 bits (508), Expect = 9e-51
 Identities = 115/238 (48%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKFDAEFRRF +       F++F  LL  +H++  +D ++ Y D +   LLP+ NDD
Sbjct: 17  EVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDD 75

Query: 181 NYNRALSLKMRPLRIIIQRK--GESYGELHGYGPIVRSKVPVSKIISAMNEKRSNHSN-I 351
           + +RAL+    PLR+++Q++  G+S G       + R K  +  ++  +   R+     I
Sbjct: 76  SLHRALASGPPPLRLLVQKRAEGDSSGLAFASNSLQRRKKGL--LLRPVAPLRTRPPLLI 133

Query: 352 SILDDFXXXXXXXXXXXXPVAYRRVKLMRNSS-KPLGFYIRDGVSVRATPNGIEKVQAIF 528
           S+  DF            P  +RRV+L ++ S +PLGFYIRDG+SVR  P G+E+V  IF
Sbjct: 134 SLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIF 193

Query: 529 ISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           ISRL+  GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ
Sbjct: 194 ISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251

>sp|Q6B4M5|PAR6A_RAT Partitioning defective 6 homolog alpha (PAR-6 alpha) (PAR-6A)
           (PAR-6)
          Length = 346

 Score =  200 bits (508), Expect = 9e-51
 Identities = 115/238 (48%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1   ELKSKFDAEFRRFRINLAIHSSFEDFKVLLSNIHKLSNIDFVIQYIDENESSLLPINNDD 180
           E+KSKFDAEFRRF +       F++F  LL  +H++  +D ++ Y D +   LLP+ NDD
Sbjct: 17  EVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDD 75

Query: 181 NYNRALSLKMRPLRIIIQRK--GESYGELHGYGPIVRSKVPVSKIISAMNEKRSNHSN-I 351
           + +RAL+    PLR+++Q++  G+S G       + R K  +  ++  +   R+     I
Sbjct: 76  SLHRALASGPPPLRLLVQKRAEGDSSGLAFASNSLQRRKKGL--LLRPVAPLRTRPPLLI 133

Query: 352 SILDDFXXXXXXXXXXXXPVAYRRVKLMRNSS-KPLGFYIRDGVSVRATPNGIEKVQAIF 528
           S+  DF            P  +RRV+L ++ S +PLGFYIRDG+SVR  P G+E+V  IF
Sbjct: 134 SLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIF 193

Query: 529 ISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           ISRL+  GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ
Sbjct: 194 ISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251

>sp|Q5RDQ2|MPP5_PONPY MAGUK p55 subfamily member 5
          Length = 675

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 30/93 (32%), Positives = 51/93 (54%)
 Frame = +1

Query: 424 VKLMRNSSKPLGFYIRDGVSVRATPNGIEKVQAIFISRLIAKGLAESTGLLAVNDEVIEV 603
           V++ +    PLG  +R+            ++ ++ ISR++  G AE +GLL   DEV+E+
Sbjct: 257 VRIEKARDIPLGATVRN------------EMDSVIISRIVKGGAAEKSGLLHEGDEVLEI 304

Query: 604 NGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           NGIE+RGK +++V D++      L   + P  Q
Sbjct: 305 NGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQ 337

>sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 (Protein associated with Lin-7 1)
          Length = 675

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 30/93 (32%), Positives = 51/93 (54%)
 Frame = +1

Query: 424 VKLMRNSSKPLGFYIRDGVSVRATPNGIEKVQAIFISRLIAKGLAESTGLLAVNDEVIEV 603
           V++ +    PLG  +R+            ++ ++ ISR++  G AE +GLL   DEV+E+
Sbjct: 257 VRIEKARDIPLGATVRN------------EMDSVIISRIVKGGAAEKSGLLHEGDEVLEI 304

Query: 604 NGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 702
           NGIE+RGK +++V D++      L   + P  Q
Sbjct: 305 NGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQ 337

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,819,405
Number of Sequences: 369166
Number of extensions: 2202974
Number of successful extensions: 5679
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5649
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16033069410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00691

  1. Dr_sW_018_A10
  2. Dr_sW_018_L16
  3. Dr_sW_014_G11