Planaria EST Database

DrC_00676

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00676
         (915 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q09028|RBBP4_HUMAN  Chromatin assembly factor 1 subunit C...   506   e-143
sp|Q60972|RBBP4_MOUSE  Chromatin assembly factor 1 subunit C...   505   e-143
sp|Q24572|CAF1_DROME  Chromatin assembly factor 1 P55 subuni...   500   e-141
sp|Q16576|RBBP7_HUMAN  Histone acetyltransferase type B subu...   496   e-140
sp|Q60973|RBBP7_MOUSE  Histone acetyltransferase type B subu...   496   e-140
sp|O22467|MSI1_ARATH  WD-40 repeat protein MSI1                   392   e-109
sp|O22466|MSI1_LYCES  WD-40 repeat protein MSI1                   392   e-109
sp|P90916|LIN53_CAEEL  Trp-Asp repeats containing protein li...   358   1e-98
sp|P90917|RBA1_CAEEL  Trp-Asp repeats containing protein RBA-1    323   5e-88
sp|O22468|MSI2_ARATH  WD-40 repeat protein MSI2                   286   7e-77

>sp|Q09028|RBBP4_HUMAN Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin
           assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
           (CAF-Ip48) (Retinoblastoma binding protein p48)
           (Retinoblastoma-binding protein 4) (RBBP-4) (MSI1
           protein homolog)
          Length = 425

 Score =  506 bits (1303), Expect = e-143
 Identities = 228/297 (76%), Positives = 270/297 (90%)
 Frame = +1

Query: 25  EKDFDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLH 204
           E  FDD +EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV  PEGKD+ +H
Sbjct: 5   EAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIH 64

Query: 205 RLILGTHTSDEQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINHD 384
           RL+LGTHTSDEQNHL+IA+  +P D  +FD + Y+ +KGEFGGFGSV+GKIEI IKINH+
Sbjct: 65  RLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHE 124

Query: 385 GEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLS 564
           GEVNRARY+PQNP IIATK+PSSDVLVFDYTKHP+KPDP+G C PDLRL+GHQKEGYGLS
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184

Query: 565 WNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFG 744
           WNP  SG+LLSASDD+TIC+WDI+  P++ +++DA +IFTGH++VVEDVSWHLLHE +FG
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244

Query: 745 SVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           SVADD++LMIWDTR++ T++PS SVDAH+AEVNC+SFNP+SE+ILATGSAD+TVALW
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301


 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
 Frame = +1

Query: 502 NGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIF 681
           N   +P   +  H  E   LS+NP     L + S D T+ +WD+    R+ ++   L  F
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKL--KLHSF 313

Query: 682 TGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWD-TRTSVTNRPSQSVD----------AH 828
             H   +  V W   +E I  S   DR+L +WD ++      P  + D           H
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373

Query: 829 SAEVNCISFNPFSEYILATGSADRTVALW 915
           +A+++  S+NP   +++ + S D  + +W
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVW 402


 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H  EVN   + P +  I+AT S    V ++D      K             + H+ E + 
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 322

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDVSW 717
           + W+P     L S+  D  + +WD++    +Q   DA       L I  GH++ + D SW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382

Query: 718 HLLHEHIFGSVADDRQLMIWDTRTSVTN--RPSQSVD 822
           +     +  SV++D  + +W    ++ N   P  SVD
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419

>sp|Q60972|RBBP4_MOUSE Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin
           assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
           (CAF-Ip48) (Retinoblastoma binding protein p48)
           (Retinoblastoma-binding protein 4) (RBBP-4)
          Length = 461

 Score =  505 bits (1300), Expect = e-143
 Identities = 228/297 (76%), Positives = 269/297 (90%)
 Frame = +1

Query: 25  EKDFDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLH 204
           E  FDD +EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV  PEGKD+ +H
Sbjct: 5   EAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIH 64

Query: 205 RLILGTHTSDEQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINHD 384
           RL+LGTHTSDEQNHL+IA+  +P D  +FD + Y+ +KGEFGGFGSV+GKIEI IKINH+
Sbjct: 65  RLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHE 124

Query: 385 GEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLS 564
           GEVNRARY+PQNP IIATK+PSSDVLVFDYTKHP+KPDP+G C PDLRL+GHQKEGYGLS
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184

Query: 565 WNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFG 744
           WNP  SG+LLSASDD+TIC+WDI+  P+  +++DA +IFTGH++VVEDVSWHLLHE +FG
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244

Query: 745 SVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           SVADD++LMIWDTR++ T++PS SVDAH+AEVNC+SFNP+SE+ILATGSAD+TVALW
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301


 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
 Frame = +1

Query: 502 NGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIF 681
           N   +P   +  H  E   LS+NP     L + S D T+ +WD+    R+ ++   L  F
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKL--KLHSF 313

Query: 682 TGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWD-TRTSVTNRPSQSVD----------AH 828
             H   +  V W   +E I  S   DR+L +WD ++      P  + D           H
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373

Query: 829 SAEVNCISFNPFSEYILATGSADRTVALW 915
           +A+++  S+NP   +++ + S D  + +W
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVW 402


 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H  EVN   + P +  I+AT S    V ++D      K             + H+ E + 
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 322

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDVSW 717
           + W+P     L S+  D  + +WD++    +Q   DA       L I  GH++ + D SW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382

Query: 718 HLLHEHIFGSVADDRQLMIWDTRTSVTN--RPSQSVD 822
           +     +  SV++D  + +W    ++ N   P  SVD
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419

>sp|Q24572|CAF1_DROME Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit)
           (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit)
           (NURF-55)
          Length = 430

 Score =  500 bits (1288), Expect = e-141
 Identities = 226/296 (76%), Positives = 269/296 (90%)
 Frame = +1

Query: 28  KDFDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLHR 207
           + FDD +EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV   +GKDY +HR
Sbjct: 10  ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 69

Query: 208 LILGTHTSDEQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINHDG 387
           LILGTHTSDEQNHLLIA+  +P++  +FD + Y+ +KGEFGGFGSV GKIEI IKINH+G
Sbjct: 70  LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 129

Query: 388 EVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLSW 567
           EVNRARY+PQN  +IATK+PSSDVLVFDYTKHP+KP+P+G CQPDLRL+GHQKEGYGLSW
Sbjct: 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 189

Query: 568 NPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFGS 747
           NP  +GYLLSASDD+TIC+WDIN +P++ R+IDA +IFTGH++VVEDV+WHLLHE +FGS
Sbjct: 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 249

Query: 748 VADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           VADD++LMIWDTR + T++PS +VDAH+AEVNC+SFNP+SE+ILATGSAD+TVALW
Sbjct: 250 VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305


 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 7/162 (4%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H  EVN   + P +  I+AT S    V ++D      K             + H+ E + 
Sbjct: 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 326

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDVSW 717
           + W+P     L S+  D  + +WD++    +Q   DA       L I  GH++ + D SW
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386

Query: 718 HLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVN 843
           +     I  SV++D  + +W    +V N     + A   E N
Sbjct: 387 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 428


 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
 Frame = +1

Query: 502 NGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIF 681
           N   +P   +  H  E   LS+NP     L + S D T+ +WD+    R+ ++   L  F
Sbjct: 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKL--KLHSF 317

Query: 682 TGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVD-----------AH 828
             H   +  V W   +E I  S   DR+L +WD       + ++  +            H
Sbjct: 318 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 377

Query: 829 SAEVNCISFNPFSEYILATGSADRTVALW 915
           +A+++  S+NP   +I+ + S D  + +W
Sbjct: 378 TAKISDFSWNPNEPWIICSVSEDNIMQVW 406

>sp|Q16576|RBBP7_HUMAN Histone acetyltransferase type B subunit 2 (Retinoblastoma binding
           protein P46) (Retinoblastoma-binding protein 7) (RBBP-7)
          Length = 425

 Score =  496 bits (1276), Expect = e-140
 Identities = 224/294 (76%), Positives = 262/294 (89%)
 Frame = +1

Query: 34  FDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLHRLI 213
           F+D +EERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+V  PEGKDY LH L+
Sbjct: 7   FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV 66

Query: 214 LGTHTSDEQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINHDGEV 393
           LGTHTSDEQNHL++A  HIP D  +FD +  + DKGEFGGFGSV GKIE  IKINH+GEV
Sbjct: 67  LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV 126

Query: 394 NRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLSWNP 573
           NRARY+PQNP IIATK+PSSDVLVFDYTKHPAKPDP+G C PDLRL+GHQKEGYGLSWN 
Sbjct: 127 NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS 186

Query: 574 KRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFGSVA 753
             SG+LLSASDD+T+C+WDIN  P++ +I+DA +IFTGHS+VVEDV+WHLLHE +FGSVA
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246

Query: 754 DDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           DD++LMIWDTR++ T++PS  VDAH+AEVNC+SFNP+SE+ILATGSAD+TVALW
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300


 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 7/160 (4%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H  EVN   + P +  I+AT S    V ++D      K             + H+ E + 
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT---------FESHKDEIFQ 321

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDVSW 717
           + W+P     L S+  D  + +WD++    +Q   DA       L I  GH++ + D SW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 718 HLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAE 837
           +     +  SV++D  + IW    ++ N     V     E
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421


 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
 Frame = +1

Query: 502 NGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIF 681
           N   +P   +  H  E   LS+NP     L + S D T+ +WD+    R+ ++   L  F
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKL--KLHTF 312

Query: 682 TGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVD-----------AH 828
             H   +  V W   +E I  S   DR+L +WD       + ++  +            H
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372

Query: 829 SAEVNCISFNPFSEYILATGSADRTVALW 915
           +A+++  S+NP   +++ + S D  + +W
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIW 401

>sp|Q60973|RBBP7_MOUSE Histone acetyltransferase type B subunit 2 (Retinoblastoma binding
           protein p46) (Retinoblastoma-binding protein 7) (RBBP-7)
          Length = 425

 Score =  496 bits (1276), Expect = e-140
 Identities = 224/294 (76%), Positives = 262/294 (89%)
 Frame = +1

Query: 34  FDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLHRLI 213
           F+D +EERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+V  PEGKDY LH L+
Sbjct: 7   FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV 66

Query: 214 LGTHTSDEQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINHDGEV 393
           LGTHTSDEQNHL++A  HIP D  +FD +  + DKGEFGGFGSV GKIE  IKINH+GEV
Sbjct: 67  LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV 126

Query: 394 NRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLSWNP 573
           NRARY+PQNP IIATK+PSSDVLVFDYTKHPAKPDP+G C PDLRL+GHQKEGYGLSWN 
Sbjct: 127 NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS 186

Query: 574 KRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFGSVA 753
             SG+LLSASDD+T+C+WDIN  P++ +I+DA +IFTGHS+VVEDV+WHLLHE +FGSVA
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246

Query: 754 DDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           DD++LMIWDTR++ T++PS  VDAH+AEVNC+SFNP+SE+ILATGSAD+TVALW
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300


 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H  EVN   + P +  I+AT S    V ++D      K             + H+ E + 
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT---------FESHKDEIFQ 321

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDVSW 717
           + W+P     L S+  D  + +WD++    +Q   DA       L I  GH++ + D SW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 718 HLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAE 837
           +     +  SV++D  + IW    ++ N     V A   E
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421


 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
 Frame = +1

Query: 502 NGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIF 681
           N   +P   +  H  E   LS+NP     L + S D T+ +WD+    R+ ++   L  F
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKL--KLHTF 312

Query: 682 TGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVD-----------AH 828
             H   +  V W   +E I  S   DR+L +WD       + ++  +            H
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372

Query: 829 SAEVNCISFNPFSEYILATGSADRTVALW 915
           +A+++  S+NP   +++ + S D  + +W
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIW 401

>sp|O22467|MSI1_ARATH WD-40 repeat protein MSI1
          Length = 424

 Score =  392 bits (1006), Expect = e-109
 Identities = 178/298 (59%), Positives = 233/298 (78%), Gaps = 1/298 (0%)
 Frame = +1

Query: 25  EKDFDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLH 204
           E++    IEER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD   P GKDY + 
Sbjct: 5   EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 64

Query: 205 RLILGTHTSD-EQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINH 381
           ++ILGTHTS+ E N+L++A   +P D  E +  +Y+ D+ EFGGFG   GK++I  +INH
Sbjct: 65  KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 124

Query: 382 DGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGL 561
           DGEVNRARY+PQNP IIATK+ +++V VFDY+KHP+KP  +G C PDL+L+GH  EGYGL
Sbjct: 125 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 184

Query: 562 SWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIF 741
           SW+  + G+LLS SDD  IC+WDIN +P++ + +DA  IF  H  VVEDV+WHL HE++F
Sbjct: 185 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243

Query: 742 GSVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           GSV DD+ L+IWD R+   ++P QSV AHS EVNC++FNPF+E+++ATGS D+TV L+
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLF 301


 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
 Frame = +1

Query: 373 INHDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEG 552
           + H  EVN   + P N  ++AT S    V +FD  K         L         H++E 
Sbjct: 270 VAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRK---------LSTALHTFDSHKEEV 320

Query: 553 YGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDV 711
           + + WNPK    L S      + +WD++    +Q + DA       L I  GH+S + D 
Sbjct: 321 FQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDF 380

Query: 712 SWHLLHEHIFGSVADDRQLMIWDTRTSV 795
           SW+   + +  SVA+D  L IW    ++
Sbjct: 381 SWNPCEDWVISSVAEDNILQIWQMAENI 408


 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H+G V    +  ++  +  +      +L++D     A        +P   +  H  E   
Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSAS-------KPVQSVVAHSMEVNC 278

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHI 738
           L++NP     + + S D T+ ++D+      +++  AL  F  H   V  V W+  +E I
Sbjct: 279 LAFNPFNEWVVATGSTDKTVKLFDL------RKLSTALHTFDSHKEEVFQVGWNPKNETI 332

Query: 739 FGSVADDRQLMIWD--------TRTSVTNRPSQSV---DAHSAEVNCISFNPFSEYILAT 885
             S    R+LM+WD        T     + P + +     H+++++  S+NP  ++++++
Sbjct: 333 LASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISS 392

Query: 886 GSADRTVALW 915
            + D  + +W
Sbjct: 393 VAEDNILQIW 402

>sp|O22466|MSI1_LYCES WD-40 repeat protein MSI1
          Length = 424

 Score =  392 bits (1006), Expect = e-109
 Identities = 179/298 (60%), Positives = 232/298 (77%), Gaps = 1/298 (0%)
 Frame = +1

Query: 25  EKDFDDGIEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLH 204
           E +    IEER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD   P GKDY + 
Sbjct: 5   EDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 64

Query: 205 RLILGTHTSD-EQNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKINH 381
           ++ILGTHTS+ E N+L++A   +P +  E D   Y+ D+ EFGGFG  NGK++I  +INH
Sbjct: 65  KMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINH 124

Query: 382 DGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGL 561
           DGEVNRARY+PQNP IIATK+ S++V VFDY+KHP+KP  +G C PDLRL+GH  EGYGL
Sbjct: 125 DGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGL 184

Query: 562 SWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIF 741
           SW+  + G+LLS SDD+ IC+WDIN +P++ + ++A+ IF  H  VVEDV+WHL HE++F
Sbjct: 185 SWSQFKQGHLLSGSDDSHICLWDINATPKN-KALEAMQIFKVHEGVVEDVAWHLRHEYLF 243

Query: 742 GSVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           GSV DD+ L +WD RT    +P QSV AH +EVNC++FNPF+E+++ATGS D+TV L+
Sbjct: 244 GSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301


 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
 Frame = +1

Query: 373 INHDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEG 552
           + H  EVN   + P N  ++AT S    V +FD  K         +      L  H++E 
Sbjct: 270 VAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRK---------ISTALHTLDCHKEEV 320

Query: 553 YGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVVEDV 711
           + + WNPK    L S      + +WD++    +Q   DA       L I  GH+S + D 
Sbjct: 321 FQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDF 380

Query: 712 SWHLLHEHIFGSVADDRQLMIWDTRTSV 795
           SW+   + +  SVA+D  L IW    ++
Sbjct: 381 SWNPCEDWVVASVAEDNILQIWQMAENI 408


 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
 Frame = +1

Query: 514 QPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHS 693
           +P   +  HQ E   L++NP     + + S D T+ ++D+      ++I  AL     H 
Sbjct: 264 KPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDL------RKISTALHTLDCHK 317

Query: 694 SVVEDVSWHLLHEHIFGSVADDRQLMIWD-TRTSVTNRPSQSVDA----------HSAEV 840
             V  V W+  +E I  S    R+LM+WD +R      P  + D           H++++
Sbjct: 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKI 377

Query: 841 NCISFNPFSEYILATGSADRTVALW 915
           +  S+NP  ++++A+ + D  + +W
Sbjct: 378 SDFSWNPCEDWVVASVAEDNILQIW 402

>sp|P90916|LIN53_CAEEL Trp-Asp repeats containing protein lin-53 (Abnormal cell lineage
           protein 53)
          Length = 385

 Score =  358 bits (919), Expect = 1e-98
 Identities = 166/266 (62%), Positives = 207/266 (77%)
 Frame = +1

Query: 118 MTHALEWPSLTAQWLPDVVCPEGKDYGLHRLILGTHTSDEQNHLLIATAHIPTDSNEFDI 297
           MTHALEWPSL+ QWLPDV   +  D+ +HRLILGTHTSDEQNHLLI+   +PTD  +FD 
Sbjct: 1   MTHALEWPSLSVQWLPDVA-KDNSDHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFDA 59

Query: 298 NKYEPDKGEFGGFGSVNGKIEINIKINHDGEVNRARYLPQNPTIIATKSPSSDVLVFDYT 477
           ++Y+ ++ E+GGFG+VNGK+E +I+INH+GEVNRARY+PQ   IIATKSP +DV +FDY 
Sbjct: 60  SRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYL 119

Query: 478 KHPAKPDPNGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQR 657
           KH A P  N    P +RLKGH KEGYGLSWNP + G +LSASDD T+C WDIN +     
Sbjct: 120 KHSAVPRDNTF-NPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAG 178

Query: 658 IIDALSIFTGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAE 837
            + A  +F GH SVVEDV+WH+LH+ +FGSV DD++L+IWD RTS    P   +DAHSAE
Sbjct: 179 ELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST---PGHCIDAHSAE 235

Query: 838 VNCISFNPFSEYILATGSADRTVALW 915
           VNC++FNP+SE+ILATGSAD+TVALW
Sbjct: 236 VNCLAFNPYSEFILATGSADKTVALW 261


 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLK-----GHQ 543
           H  EVN   + P +  I+AT S    V ++D                +LR+K      H+
Sbjct: 232 HSAEVNCLAFNPYSEFILATGSADKTVALWDLR--------------NLRMKLHSFESHR 277

Query: 544 KEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA-------LSIFTGHSSVV 702
            E + + W+P     L S+  D  + +WD++    DQ   DA       L I  GH++ +
Sbjct: 278 DEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKI 337

Query: 703 EDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAE 837
            D SW+     +  SV++D  L +W    ++ N   +   A   E
Sbjct: 338 SDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 382


 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
 Frame = +1

Query: 529 LKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVED 708
           +  H  E   L++NP     L + S D T+ +WD+    R+ R+   L  F  H   +  
Sbjct: 229 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL----RNLRM--KLHSFESHRDEIFQ 282

Query: 709 VSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVD-----------AHSAEVNCISF 855
           V W   +E I  S   D++L +WD      ++ ++  +            H+A+++  S+
Sbjct: 283 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 342

Query: 856 NPFSEYILATGSADRTVALW 915
           NP   +++ + S D  + +W
Sbjct: 343 NPNEPWVVCSVSEDNILQVW 362

>sp|P90917|RBA1_CAEEL Trp-Asp repeats containing protein RBA-1
          Length = 412

 Score =  323 bits (827), Expect = 5e-88
 Identities = 158/286 (55%), Positives = 202/286 (70%), Gaps = 2/286 (0%)
 Frame = +1

Query: 64  NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKDYGLHRLILGTHT-SDEQ 240
           ++E++IWKKN P+LYD V+T  +EWPSL+ QW+PDV   E  D  +HR+I GTHT    Q
Sbjct: 11  SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 70

Query: 241 NHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNG-KIEINIKINHDGEVNRARYLPQ 417
           NHL+I+   I TD+ EFD  K++ ++ EFGG+G  +  K +  IKINH GEV+RARY+P 
Sbjct: 71  NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH 130

Query: 418 NPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLS 597
           NP IIA++ PS DV +FDYTKHP++P      +P LRLKGH+ EGYG+SW+  R G+LL+
Sbjct: 131 NPFIIASRGPSDDVYIFDYTKHPSEPKDTKF-RPQLRLKGHEGEGYGMSWSNTREGHLLT 189

Query: 598 ASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFGSVADDRQLMIW 777
           A DD  IC WDIN +      I   S F GHSS  EDVS+H LH  +FGSV DDR+L +W
Sbjct: 190 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249

Query: 778 DTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           D R S   +P  +   H+AEVNCI+FNPFSEYILATGS D+TVALW
Sbjct: 250 DLRQS---KPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALW 292


 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 20/176 (11%)
 Frame = +1

Query: 334 FGSVNGKIEINI-----------KINHDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTK 480
           FGSV    ++N+            + H  EVN   + P +  I+AT S    V ++D   
Sbjct: 237 FGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRN 296

Query: 481 HPAKPDPNGLCQPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDIN-------- 636
              K            LK H  E + +S++P     L S+  D+ + +WDI+        
Sbjct: 297 MRKKM---------YTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSS 347

Query: 637 -TSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHIFGSVADDRQLMIWDTRTSVTN 801
             +  D    + + I  GH+  V D SW+        S  +   L +W+   S+ +
Sbjct: 348 SAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVS 403


 Score = 41.6 bits (96), Expect = 0.003
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
 Frame = +1

Query: 514 QPDLRLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHS 693
           +P L   GH  E   +++NP     L + S D T+ +WD+    R+ R    +     H+
Sbjct: 255 KPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM----RNMR--KKMYTLKHHN 308

Query: 694 SVVEDVSWHLLHEHIFGSVADDRQLMIWDTR-----TSVTNRPSQSVD--------AHSA 834
             +  VS+   +E +  S   D ++++WD       +S +   S SV          H+ 
Sbjct: 309 DEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTG 368

Query: 835 EVNCISFNPFSEYILATGSADRTVALW 915
           +V   S+NP   + + +      + +W
Sbjct: 369 KVADFSWNPNRPWTICSSDEFNALQVW 395

>sp|O22468|MSI2_ARATH WD-40 repeat protein MSI2
          Length = 415

 Score =  286 bits (731), Expect = 7e-77
 Identities = 143/299 (47%), Positives = 197/299 (65%), Gaps = 6/299 (2%)
 Frame = +1

Query: 37  DDGIEER---VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVCPEGKD--YGL 201
           D+G EE     + E++ +WKKNTPFLYDL+++H LEWPSLT  W+P    P   D  +G+
Sbjct: 3   DEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGV 62

Query: 202 HRLILGTHTSDE-QNHLLIATAHIPTDSNEFDINKYEPDKGEFGGFGSVNGKIEINIKIN 378
           H+LILGTHTS   Q+ L++A    PT + E  I     D            K+EI  +I 
Sbjct: 63  HKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDP--------FIPKVEIRQRIR 114

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
            DGEVNRAR +PQ PT++  K+   +V +FDY KH AK   +  C PDLRL GH KEGYG
Sbjct: 115 VDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSE-CDPDLRLVGHDKEGYG 173

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVEDVSWHLLHEHI 738
           LSW+P + GYLLS S D  IC+WD++ +P+D ++++A+ ++ GH S + DVSWH+ +E++
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWHMKNENL 232

Query: 739 FGSVADDRQLMIWDTRTSVTNRPSQSVDAHSAEVNCISFNPFSEYILATGSADRTVALW 915
           FGS  +D +L+IWDTR   TN+    V  H  EVN +SFNPF+E++LAT S+D TVAL+
Sbjct: 233 FGSAGEDGRLVIWDTR---TNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALF 288


 Score = 67.4 bits (163), Expect = 5e-11
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
 Frame = +1

Query: 379 HDGEVNRARYLPQNPTIIATKSPSSDVLVFDYTKHPAKPDPNGLCQPDLRLKGHQKEGYG 558
           H+ EVN   + P N  ++AT S  S V +FD  K         L  P   +  H+ E + 
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRK---------LNAPLHVMSSHEGEVFQ 309

Query: 559 LSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDA---------LSIFTGHSSVVEDV 711
           + W+P     L S+ +D  + +WD+N    +Q  I+          L    GH + + D 
Sbjct: 310 VEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDF 369

Query: 712 SWHLLHEHIFGSVADDRQLMIWDTRTSV 795
           +W+     +  SVA+D  L +W    S+
Sbjct: 370 AWNKNEPWVIASVAEDNSLQVWQMAESI 397


 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
 Frame = +1

Query: 526 RLKGHQKEGYGLSWNPKRSGYLLSASDDNTICMWDINTSPRDQRIIDALSIFTGHSSVVE 705
           ++K H++E   LS+NP     L +AS D+T+ ++D+      +++   L + + H   V 
Sbjct: 255 QVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDL------RKLNAPLHVMSSHEGEVF 308

Query: 706 DVSWHLLHEHIFGSVADDRQLMIWDTRTSVTNRPSQSVDA-------------HSAEVNC 846
            V W   HE +  S  +DR+LM+WD       +    +DA             H A+++ 
Sbjct: 309 QVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISD 368

Query: 847 ISFNPFSEYILATGSADRTVALW 915
            ++N    +++A+ + D ++ +W
Sbjct: 369 FAWNKNEPWVIASVAEDNSLQVW 391

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.317    0.136    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,191,348
Number of Sequences: 369166
Number of extensions: 2597247
Number of successful extensions: 8673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8051
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

Cluster detail

DrC_00676

  1. Dr_sW_024_G16
  2. Dr_sW_017_L09
  3. Dr_sW_024_K06