Planaria EST Database

DrC_00572

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00572
         (1034 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08574|CY1_HUMAN  Cytochrome c1, heme protein, mitochondr...   319   9e-87
sp|Q9D0M3|CY1_MOUSE  Cytochrome c1, heme protein, mitochondr...   317   5e-86
sp|P00125|CY1_BOVIN  Cytochrome c1, heme protein, mitochondr...   311   1e-84
sp|P25076|CY11_SOLTU  Cytochrome c1, heme protein, mitochond...   277   4e-74
sp|P29610|CY12_SOLTU  Cytochrome c1, heme protein, mitochond...   274   3e-73
sp|P07142|CY1_NEUCR  Cytochrome c1, heme protein, mitochondr...   261   3e-69
sp|P07143|CY1_YEAST  Cytochrome c1, heme protein, mitochondr...   260   5e-69
sp|Q00988|CY1_KLULA  Cytochrome c1, heme protein, mitochondr...   257   4e-68
sp|P20114|CY1_EUGGR  Cytochrome c1, heme protein                  199   8e-51
sp|P51131|CYBC_BRAJA  Cytochrome b/c1 [Contains: Cytochrome ...   196   7e-50

>sp|P08574|CY1_HUMAN Cytochrome c1, heme protein, mitochondrial precursor (Cytochrome
           c-1)
          Length = 325

 Score =  319 bits (817), Expect = 9e-87
 Identities = 149/260 (57%), Positives = 191/260 (73%)
 Frame = +2

Query: 65  GTVVCGAAVTTLAVSFAVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQVC 244
           G +  G A   +A+  AV+   ASDL  HPPS PW H GL  S DH +IRRG+QVYKQVC
Sbjct: 65  GMLAAGGAGLAVALHSAVS---ASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVC 121

Query: 245 AACHSMKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPKPYAN 424
           A+CHSM F++YRHLVGVC TEDEAK+ AAE+ V DGPN++G M+ RPG+L DYFPKPY N
Sbjct: 122 ASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPN 181

Query: 425 DELARKANNGALPPDLSLIVKAREGGEDYIFQILTGYCDPPAGRNLDEGQYYNPYFPGGG 604
            E AR ANNGALPPDLS IV+AR GGEDY+F +LTGYC+PP G +L EG Y+NPYFPG  
Sbjct: 182 SEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQA 241

Query: 605 ISMAQALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTIGFLIA 784
           I+MA  +Y +++E+ DGTPAT SQ+AKDV TFL W  +P  + RK+   +  + +  L+ 
Sbjct: 242 IAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVP 301

Query: 785 IVFYIRNMKFAHLKNIKCAF 844
           +V+ I+  K++ LK+ K A+
Sbjct: 302 LVYTIKRHKWSVLKSRKLAY 321

>sp|Q9D0M3|CY1_MOUSE Cytochrome c1, heme protein, mitochondrial precursor (Cytochrome
           c-1)
          Length = 325

 Score =  317 bits (811), Expect = 5e-86
 Identities = 148/260 (56%), Positives = 188/260 (72%)
 Frame = +2

Query: 65  GTVVCGAAVTTLAVSFAVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQVC 244
           G +  G A   +A+  AV+   ASDL  HPPS PW H GL  S DH +IRRG+QVYKQVC
Sbjct: 65  GMLAAGGAGLAVALHSAVS---ASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVC 121

Query: 245 AACHSMKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPKPYAN 424
           ++CHSM +++YRHLVGVC TE+EAK  A E+ V DGPND+G M+ RPG+L DYFPKPY N
Sbjct: 122 SSCHSMDYVAYRHLVGVCYTEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPN 181

Query: 425 DELARKANNGALPPDLSLIVKAREGGEDYIFQILTGYCDPPAGRNLDEGQYYNPYFPGGG 604
            E AR ANNGALPPDLS IV+AR GGEDY+F +LTGYC+PP G +L EG Y+NPYFPG  
Sbjct: 182 PEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQA 241

Query: 605 ISMAQALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTIGFLIA 784
           I MA  +Y E++EY DGTPAT SQ+AKDV TFL W  +P  + RK+   +  L +G L+ 
Sbjct: 242 IGMAPPIYTEVLEYDDGTPATMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLP 301

Query: 785 IVFYIRNMKFAHLKNIKCAF 844
           + + ++  K++ LK+ K A+
Sbjct: 302 LTYAMKRHKWSVLKSRKLAY 321

>sp|P00125|CY1_BOVIN Cytochrome c1, heme protein, mitochondrial (Cytochrome c-1)
          Length = 241

 Score =  311 bits (798), Expect = 1e-84
 Identities = 141/237 (59%), Positives = 179/237 (75%)
 Frame = +2

Query: 134 SDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQVCAACHSMKFISYRHLVGVCLTEDE 313
           SDL  HPPS PW H GL  S DH +IRRG+QVYKQVC++CHSM +++YRHLVGVC TEDE
Sbjct: 1   SDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDE 60

Query: 314 AKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPKPYANDELARKANNGALPPDLSLIVKAR 493
           AK  A E+ V DGPN++G M+ RPG+L DYFPKPY N E AR ANNGALPPDLS IV+AR
Sbjct: 61  AKALAEEVEVQDGPNEDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRAR 120

Query: 494 EGGEDYIFQILTGYCDPPAGRNLDEGQYYNPYFPGGGISMAQALYDEIIEYPDGTPATTS 673
            GGEDY+F +LTGYC+PP G +L EG Y+NPYFPG  I MA  +Y+E++E+ DGTPAT S
Sbjct: 121 HGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEFDDGTPATMS 180

Query: 674 QLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTIGFLIAIVFYIRNMKFAHLKNIKCAF 844
           Q+AKDV TFL W  +P  + RK+   +  L +G L+ +V+ ++  K++ LK+ K A+
Sbjct: 181 QVAKDVCTFLRWAAEPEHDHRKRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSRKLAY 237

>sp|P25076|CY11_SOLTU Cytochrome c1, heme protein, mitochondrial precursor (Clone
           PC13III)
          Length = 320

 Score =  277 bits (708), Expect = 4e-74
 Identities = 142/270 (52%), Positives = 183/270 (67%), Gaps = 3/270 (1%)
 Frame = +2

Query: 35  LKSKWTKRIGGTVVCGAAVTTLAVSFAVTPAYASDLIAHP---PSLPWYHSGLTHSYDHA 205
           L S  +K        GA V+ L +SFA T AY SD   H    P+ PW H G+  SYDHA
Sbjct: 47  LGSAGSKSFRALAAIGAGVSGL-LSFA-TIAY-SDEAEHGLECPNYPWPHEGILSSYDHA 103

Query: 206 AIRRGYQVYKQVCAACHSMKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRP 385
           +IRRG+QVY+QVCA+CHSM  ISYR LVGV  TE+E K  AAEI V+DGPNDEG M+ RP
Sbjct: 104 SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRP 163

Query: 386 GRLGDYFPKPYANDELARKANNGALPPDLSLIVKAREGGEDYIFQILTGYCDPPAGRNLD 565
           G+L D FP+PYAN+  AR AN GA PPDLSLI KAR  G++Y+F +LT Y DPPAG ++ 
Sbjct: 164 GKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIR 223

Query: 566 EGQYYNPYFPGGGISMAQALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKF 745
           EG +YNPYFPGG I+M + L D  +EY DG PAT +Q+ KDVV+FL+W  +P +E+RK  
Sbjct: 224 EGLHYNPYFPGGAIAMPKMLNDGAVEYEDGIPATEAQMGKDVVSFLSWAAEPEMEERKLM 283

Query: 746 APRFYLTIGFLIAIVFYIRNMKFAHLKNIK 835
             ++   +   +    Y R ++++ LK+ K
Sbjct: 284 GFKWIFVLSLALLQAAYYRRLRWSVLKSRK 313

>sp|P29610|CY12_SOLTU Cytochrome c1, heme protein, mitochondrial precursor (Clone PC18I)
          Length = 260

 Score =  274 bits (701), Expect = 3e-73
 Identities = 132/252 (52%), Positives = 172/252 (68%)
 Frame = +2

Query: 80  GAAVTTLAVSFAVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQVCAACHS 259
           GA V+ L     V  A  ++     PS PW H+G+  SYDHA+IRRG+QVY+QVCA+CHS
Sbjct: 2   GAGVSGLLGFATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHS 61

Query: 260 MKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPKPYANDELAR 439
           M  +SYR LVGV  TE+E K  AAEI V DGPNDEG M+ RPG+L D FP+PY N+  AR
Sbjct: 62  MSLVSYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNEAAAR 121

Query: 440 KANNGALPPDLSLIVKAREGGEDYIFQILTGYCDPPAGRNLDEGQYYNPYFPGGGISMAQ 619
            AN GA PPDLSLI KAR  G++Y+F +LT Y DPPAG ++ EG +YNPYFPGG I+M +
Sbjct: 122 FANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPK 181

Query: 620 ALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTIGFLIAIVFYI 799
            L D  +EY DG PAT +Q+ KDVV+FLTW  +P +E+RK    ++   +   +    Y 
Sbjct: 182 MLNDGAVEYEDGVPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYY 241

Query: 800 RNMKFAHLKNIK 835
           R ++++ LK+ K
Sbjct: 242 RRLRWSVLKSRK 253

>sp|P07142|CY1_NEUCR Cytochrome c1, heme protein, mitochondrial precursor
          Length = 332

 Score =  261 bits (666), Expect = 3e-69
 Identities = 137/290 (47%), Positives = 177/290 (61%), Gaps = 23/290 (7%)
 Frame = +2

Query: 44  KWTKRIGGTVVCGAAVTT---LAVSFAVTPAYASDLIA-------------------HPP 157
           K+ KR   T   GAA  +   L ++ A   A A+  IA                   H  
Sbjct: 22  KFAKRSASTQSSGAAAESPLRLNIAAAAATAVAAGSIAWYYHLYGFASAMTPAEEGLHAT 81

Query: 158 SLPWYHSGLTHSYDHAAIRRGYQVYKQVCAACHSMKFISYRHLVGVCLTEDEAKQEAAEI 337
             PW H     ++DH A+RRG+QVY++VCA+CHS+  + YR LVG  LT DEAK  A E 
Sbjct: 82  KYPWVHEQWLKTFDHQALRRGFQVYREVCASCHSLSRVPYRALVGTILTVDEAKALAEEN 141

Query: 338 NVLDGPNDEGLMYDRPGRLGDYFPKPYANDELARKANNGALPPDLSLIVKAREGGEDYIF 517
                PND+G +  RPG+L DY P PY NDE AR ANNGALPPDLSLIVKAR GG DYIF
Sbjct: 142 EYDTEPNDQGEIEKRPGKLSDYLPDPYKNDEAARFANNGALPPDLSLIVKARHGGCDYIF 201

Query: 518 QILTGYCD-PPAGRNLDEGQYYNPYFPGGGISMAQALYDEIIEYPDGTPATTSQLAKDVV 694
            +LTGY D PPAG ++  G  +NPYFPG GI+MA+ LYD +++Y DGTPA+TSQ+AKDVV
Sbjct: 202 SLLTGYPDEPPAGASVGAGLNFNPYFPGTGIAMARVLYDGLVDYEDGTPASTSQMAKDVV 261

Query: 695 TFLTWTGDPHLEKRKKFAPRFYLTIGFLIAIVFYIRNMKFAHLKNIKCAF 844
            FL W  +P ++ RK+   +  +    L A+  Y++  K+A LK+ K  +
Sbjct: 262 EFLNWAAEPEMDDRKRMGMKVLVVTSVLFALSVYVKRYKWAWLKSRKIVY 311

>sp|P07143|CY1_YEAST Cytochrome c1, heme protein, mitochondrial precursor
          Length = 309

 Score =  260 bits (664), Expect = 5e-69
 Identities = 129/270 (47%), Positives = 174/270 (64%), Gaps = 3/270 (1%)
 Frame = +2

Query: 65  GTVVCGAAVTTL--AVSFAVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQ 238
           G    G   +TL  A S       A++   H P+  W H+G   ++DHA+IRRGYQVY++
Sbjct: 40  GVAAAGITASTLLYADSLTAEAMTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYRE 99

Query: 239 VCAACHSMKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPKPY 418
           VCAACHS+  +++R LVGV  T +E +  A E    D P+++G    RPG+L DY P PY
Sbjct: 100 VCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPY 159

Query: 419 ANDELARKANNGALPPDLSLIVKAREGGEDYIFQILTGYCD-PPAGRNLDEGQYYNPYFP 595
            N++ AR AN GALPPDLSLIVKAR GG DYIF +LTGY D PPAG  L  G  YNPYFP
Sbjct: 160 PNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFP 219

Query: 596 GGGISMAQALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTIGF 775
           GG I+MA+ L+D+++EY DGTPATTSQ+AKDV TFL W  +P  ++RK+   +  + +  
Sbjct: 220 GGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSS 279

Query: 776 LIAIVFYIRNMKFAHLKNIKCAFTSKRYKK 865
           L  +  +++  K+A +K  K  F   + +K
Sbjct: 280 LYLLSIWVKKFKWAGIKTRKFVFNPPKPRK 309

>sp|Q00988|CY1_KLULA Cytochrome c1, heme protein, mitochondrial precursor
          Length = 292

 Score =  257 bits (656), Expect = 4e-68
 Identities = 126/265 (47%), Positives = 172/265 (64%), Gaps = 3/265 (1%)
 Frame = +2

Query: 59  IGGTVVCGAAVTTL--AVSFAVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQVY 232
           +GG  V G   +T+  A S       A++   H P   W H+G   ++DH++IRRGYQVY
Sbjct: 23  VGGAAVVGIGASTMLYADSLTADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVY 82

Query: 233 KQVCAACHSMKFISYRHLVGVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGDYFPK 412
           ++VCAACHS+  +++R +VGV  T  E +  A E    D P+D+G    RPG+L DY P 
Sbjct: 83  REVCAACHSLDRVAWRTMVGVSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPG 142

Query: 413 PYANDELARKANNGALPPDLSLIVKAREGGEDYIFQILTGYC-DPPAGRNLDEGQYYNPY 589
           PY N++ AR AN GALPPDLSLIVKAR GG DYIF +LTGY  +PPAG  L  G  YNPY
Sbjct: 143 PYPNEQAARAANQGALPPDLSLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPY 202

Query: 590 FPGGGISMAQALYDEIIEYPDGTPATTSQLAKDVVTFLTWTGDPHLEKRKKFAPRFYLTI 769
           FPGG I+M + L+D+++EY DGTPATTSQ+AKDV TFL W  +P  ++RK+   +  + +
Sbjct: 203 FPGGSIAMGRVLFDDLVEYEDGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIVL 262

Query: 770 GFLIAIVFYIRNMKFAHLKNIKCAF 844
             L  +  +++  K+A +K+ K  F
Sbjct: 263 SSLYLLSVWVKKFKWASIKSRKIVF 287

>sp|P20114|CY1_EUGGR Cytochrome c1, heme protein
          Length = 243

 Score =  199 bits (507), Expect = 8e-51
 Identities = 105/241 (43%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
 Frame = +2

Query: 146 AHPPSLPWYHSGLTHSYDHAAIRRGYQVYKQVCAACHSMKFISYRHLVGVCLTEDEAKQE 325
           +HPP+LPW H       D  ++RRG +VY+QV A CHS+ FI YRH     ++++E K  
Sbjct: 4   SHPPALPWPHFQWFQGLDWRSVRRGKEVYEQVFAPCHSLSFIKYRHFEAF-MSKEEVKNM 62

Query: 326 AAEINVLDGPNDEGLMYDRPGRLGDYFPKPYANDELARKANNGALPPDLSLIVKAREGGE 505
           AA   V D P+++G    RPG+  D   +PY N++ AR ANNGALPPDLS+I  AR GG 
Sbjct: 63  AASFEVDDDPDEKGEARKRPGKRFDTVVQPYKNEQEARYANNGALPPDLSVITNARHGGV 122

Query: 506 DYIFQILTGYCDP-PAGRNLDEGQYYNPYFPGGGISMAQALYDEIIEYPDGTPATTSQLA 682
           DYI+ +LTGY  P P G  L   Q+YNPYF GG I M   L D++IEY DGTPA+  Q+A
Sbjct: 123 DYIYALLTGYGRPVPGGVQLSTTQWYNPYFHGGIIGMPPPLTDDMIEYEDGTPASVPQMA 182

Query: 683 KDVVTFLTWTGDPHLEKRKKFAPRFYLTIGFLIAIVFYIRNMKFAHLKNIKCAFTSKRYK 862
           KDV  FL W  +P  ++RK    +   T+  +     Y         ++ + AF    Y 
Sbjct: 183 KDVTCFLEWCSNPWWDERKLLGYKTIATLAVIAVSSGYYNRFLSGLWRSRRLAFRPFNYS 242

Query: 863 K 865
           K
Sbjct: 243 K 243

>sp|P51131|CYBC_BRAJA Cytochrome b/c1 [Contains: Cytochrome b; Cytochrome c1]
          Length = 687

 Score =  196 bits (499), Expect = 7e-50
 Identities = 103/278 (37%), Positives = 154/278 (55%), Gaps = 26/278 (9%)
 Frame = +2

Query: 62   GGTVVCGAAVTTLAVSF----AVTPAYASDLIAHPPSLPWYHSGLTHSYDHAAIRRGYQV 229
            GG  V   A+  +A       ++  A A++    PP   W  +G    +D  A++RG +V
Sbjct: 407  GGKAVASVAIALVAAGALFLGSLQDARANEGSDKPPGNKWSFAGPFGKFDRGALQRGLKV 466

Query: 230  YKQVCAACHSMKFISYRHLV---GVCLTEDEAKQEAAEINVLDGPNDEGLMYDRPGRLGD 400
            YK+VCA+CH + +I++R+L    G   +  +    A++  + DGPND G M++RPGR  D
Sbjct: 467  YKEVCASCHGLSYIAFRNLAEAGGPSYSVAQVAAFASDYKIKDGPNDAGDMFERPGRPAD 526

Query: 401  YFPKPYANDELARKANNGALPPDLSLIVKAR------------------EGGEDYIFQIL 526
            YFP P+ N++ AR AN GA PPDLSLI KAR                  E G DY+  +L
Sbjct: 527  YFPSPFPNEQAARAANGGAAPPDLSLITKARSYGRGFPWFIFDFFTQYQEQGPDYVSAVL 586

Query: 527  TGYCDP-PAGRNLDEGQYYNPYFPGGGISMAQALYDEIIEYPDGTPATTSQLAKDVVTFL 703
             G+ +  P G  + EG YYN YFPG  I M + L D  + Y DG+PAT +Q +KDV TFL
Sbjct: 587  QGFEEKVPEGVTIPEGSYYNKYFPGHAIKMPKPLSDGQVTYDDGSPATVAQYSKDVTTFL 646

Query: 704  TWTGDPHLEKRKKFAPRFYLTIGFLIAIVFYIRNMKFA 817
             WT +PH+E RK+   + ++ +     ++++ +   +A
Sbjct: 647  MWTAEPHMEARKRLGFQVFVFLIIFAGLMYFTKKKVWA 684

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,078,889
Number of Sequences: 369166
Number of extensions: 2549991
Number of successful extensions: 5993
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5977
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11148909035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00572

  1. Dr_sW_014_N22
  2. Dr_sW_006_J09
  3. Dr_sW_023_L15