Planarian EST Database

DrC_00545

Cluster detail
GO Category : Not Available
Consensus Sequence :
>DrC_00545 TACTATGAATTCGGTTAGTCCTAAAGCATTTTTAATACCATCTTATACTTTTCTTTCTAT AATAGGATTAGTTGGTCTCTATTATTGCCTCAGTGATCAAGGCTATAGATTTGACATTGG TTGGTTTTTGCAAGAAACGTCTCCATATCTTTGGGCTAATATTGGTATTGGTTTATGTAT ATCATTGTCAGTATTAGGCGCTGCATTGGGAATTTATACAACAGGATCAAGTATTTTAGG CGCTGGTGTTAAAACTCCTAGGATTCGTACAAAAAATTTGGTCAGCATTATTTTTTGTGA AGCCGTTGCCATTTATGGAATTATTATGGCTATTGTCATTTCACAAAACATAAAGTCATT CGACTCAAAAATCGCATCCTTCCGTGTATTGCAAATTAATCACGAAGGTGGATTTCGAAT GTTCGGTTCTGGATTAACGGTTGGATTAAGCAACCTTGTTTGTGGTATTTGTGTTGGTGT TGTTGGTTCTGGTGCAGCTTTAGCTGATTCAGCTAACGCTAGTTTATTTGTCAAGATTTT AATAGTCGAAATTTTTGGCAGTGCTATTGGATTGTTTGGTGTAATTGTTGGAATTTTACA GGTTGCAGGAACTAAAATGGGAGATAATGTTTAGATTATTTACATGTATCGTATTTGTTC TTAAGTGATTTATTCTTTTTGTTAAAATAATTGACAACGCA

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00545
         (701 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91V37|VATO_MOUSE  Vacuolar ATP synthase 21 kDa proteolip...   229   5e-60
sp|Q99437|VATO_HUMAN  Vacuolar ATP synthase 21 kDa proteolip...   229   7e-60
sp|P23968|VATO_YEAST  Vacuolar ATP synthase 22 kDa proteolip...   177   3e-44
sp|O14046|VATO_SCHPO  Probable vacuolar ATP synthase 20 kDa ...   174   2e-43
sp|P59229|VATL4_ARATH  Vacuolar ATP synthase 16 kDa proteoli...    75   1e-13
sp|P68161|VATL_MESCR  Vacuolar ATP synthase 16 kDa proteolip...    75   2e-13
sp|P59228|VATL2_ARATH  Vacuolar ATP synthase 16 kDa proteoli...    75   2e-13
sp|P59227|VATL1_ARATH  Vacuolar ATP synthase 16 kDa proteoli...    75   2e-13
sp|Q43434|VATL_GOSHI  Vacuolar ATP synthase 16 kDa proteolip...    75   2e-13
sp|O24011|VATL_LYCES  Vacuolar ATP synthase 16 kDa proteolip...    75   2e-13

>sp|Q91V37|VATO_MOUSE Vacuolar ATP synthase 21 kDa proteolipid subunit (23-kDa subunit of
           V-ATPase)
          Length = 205

 Score =  229 bits (584), Expect = 5e-60
 Identities = 122/192 (63%), Positives = 143/192 (74%)
 Frame = +2

Query: 50  FLSIIGLVGLYYCLSDQGYRFDIGWFLQETSPYLWANIGIGLCISLSVLGAALGIYTTGS 229
           F + + +VG+ Y + D G+RFD+ WFL ETSP++W+N+GIGL ISLSV+GAA GIY TGS
Sbjct: 15  FWACMVVVGICYTIFDLGFRFDVAWFLTETSPFMWSNLGIGLAISLSVVGAAWGIYITGS 74

Query: 230 SILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMAIVISQNIKSFDSKIASFRVLQINHEG 409
           SI+G GVK PRI+TKNLVSIIFCEAVAIYGIIMAIVIS   + F S      +   N+  
Sbjct: 75  SIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPF-SATEPKAIGHRNYHA 133

Query: 410 GFRMFGSGLTVGLSNLXXXXXXXXXXXXAALADSANASLFVKILIVEIFGSAIGLFGVIV 589
           G+ MFG+GLTVGLSNL            AALAD+ N SLFVKILIVEIFGSAIGLFGVIV
Sbjct: 134 GYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIV 193

Query: 590 GILQVAGTKMGD 625
            ILQ +  KMGD
Sbjct: 194 AILQTSRVKMGD 205

>sp|Q99437|VATO_HUMAN Vacuolar ATP synthase 21 kDa proteolipid subunit (HATPL)
          Length = 205

 Score =  229 bits (583), Expect = 7e-60
 Identities = 123/188 (65%), Positives = 140/188 (74%), Gaps = 3/188 (1%)
 Frame = +2

Query: 71  VGLYYCLSDQGYRFDIGWFLQETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGV 250
           VG+ Y + D G+RFD+ WFL ETSP++W+N+GIGL ISLSV+GAA GIY TGSSI+G GV
Sbjct: 22  VGVCYTIFDLGFRFDVAWFLTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGV 81

Query: 251 KTPRIRTKNLVSIIFCEAVAIYGIIMAIVISQNIKSF---DSKIASFRVLQINHEGGFRM 421
           K PRI+TKNLVSIIFCEAVAIYGIIMAIVIS   + F   D K    R    N+  G+ M
Sbjct: 82  KAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHR----NYHAGYSM 137

Query: 422 FGSGLTVGLSNLXXXXXXXXXXXXAALADSANASLFVKILIVEIFGSAIGLFGVIVGILQ 601
           FG+GLTVGLSNL            AALAD+ N SLFVKILIVEIFGSAIGLFGVIV ILQ
Sbjct: 138 FGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQ 197

Query: 602 VAGTKMGD 625
            +  KMGD
Sbjct: 198 TSRVKMGD 205

>sp|P23968|VATO_YEAST Vacuolar ATP synthase 22 kDa proteolipid subunit
          Length = 213

 Score =  177 bits (448), Expect = 3e-44
 Identities = 92/185 (49%), Positives = 125/185 (67%)
 Frame = +2

Query: 44  YTFLSIIGLVGLYYCLSDQGYRFDIGWFLQETSPYLWANIGIGLCISLSVLGAALGIYTT 223
           Y  L ++ + GLY   +  G   + G FL  TSPY+WAN+GI LC+ LSV+GAA GI+ T
Sbjct: 23  YLVLIVVIVYGLYKLFTGHGSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFIT 82

Query: 224 GSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMAIVISQNIKSFDSKIASFRVLQINH 403
           GSS++GAGV+ PRI TKNL+SIIFCE VAIYG+I+AIV S  +       A     + N 
Sbjct: 83  GSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKL---TVATAENMYSKSNL 139

Query: 404 EGGFRMFGSGLTVGLSNLXXXXXXXXXXXXAALADSANASLFVKILIVEIFGSAIGLFGV 583
             G+ +F +G+TVG SNL            AA++D+A+++LFVKIL++EIFGS +GL G+
Sbjct: 140 YTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLLGL 199

Query: 584 IVGIL 598
           IVG+L
Sbjct: 200 IVGLL 204

>sp|O14046|VATO_SCHPO Probable vacuolar ATP synthase 20 kDa proteolipid subunit
          Length = 199

 Score =  174 bits (442), Expect = 2e-43
 Identities = 96/184 (52%), Positives = 122/184 (66%)
 Frame = +2

Query: 47  TFLSIIGLVGLYYCLSDQGYRFDIGWFLQETSPYLWANIGIGLCISLSVLGAALGIYTTG 226
           T +SII  VGLY    + G  FD G FL +TSPY W  +GI  C++  ++GAA GI+  G
Sbjct: 12  TVMSII--VGLYMLFHNSGESFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAAWGIFICG 69

Query: 227 SSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMAIVISQNIKSFDSKIASFRVLQINHE 406
           +SILG  VK PRI+TKNL+SIIFCE VAIY +I+AIV S  I   D   A F   + ++ 
Sbjct: 70  TSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIAIVFSAKIN--DINPAGF-YTKSHYY 126

Query: 407 GGFRMFGSGLTVGLSNLXXXXXXXXXXXXAALADSANASLFVKILIVEIFGSAIGLFGVI 586
            GF +F  G+TVGL NL            AALAD+ +ASLFVK+L+VEIFGS +GLFG+I
Sbjct: 127 TGFALFWGGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLI 186

Query: 587 VGIL 598
           VG+L
Sbjct: 187 VGLL 190


 Score = 34.3 bits (77), Expect = 0.33
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           W  I +GLC    + G  +GI  TGSS   A  +   +  K LV  IF   + ++G+I+ 
Sbjct: 133 WGGITVGLCNL--ICGVCVGI--TGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVG 188

Query: 332 IVISQNIKSF 361
           ++I      F
Sbjct: 189 LLIGGKASDF 198

>sp|P59229|VATL4_ARATH Vacuolar ATP synthase 16 kDa proteolipid subunit 4 (V-ATPase 16 kDa
           proteolipid subunit 4)
          Length = 166

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 46/160 (28%), Positives = 80/160 (50%)
 Frame = +2

Query: 119 GWFLQETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFC 298
           G+   ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++  
Sbjct: 5   GFSGDETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63

Query: 299 EAVAIYGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXX 478
             + IYG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L       
Sbjct: 64  GVLGIYGLIIAVIISTGI---NPKAKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIG 115

Query: 479 XXXXXAALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
                   A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 116 IVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGII 155


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 94  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 153

Query: 332 IVIS 343
           I++S
Sbjct: 154 IILS 157

>sp|P68161|VATL_MESCR Vacuolar ATP synthase 16 kDa proteolipid subunit
 sp|P68162|VATL_BETVU Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 165

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = +2

Query: 134 ETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAI 313
           ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++    + I
Sbjct: 9   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 67

Query: 314 YGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXXXXXXX 493
           YG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L            
Sbjct: 68  YGLIIAVIISTGI---NPKAKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIGIVGDA 119

Query: 494 AALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
              A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 120 GVRANAQQPKLFVGMILILIFAEALALYGLIVGII 154


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 93  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 152

Query: 332 IVIS 343
           I++S
Sbjct: 153 IILS 156

>sp|P59228|VATL2_ARATH Vacuolar ATP synthase 16 kDa proteolipid subunit 2 (V-ATPase 16 kDa
           proteolipid subunit 2)
          Length = 165

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = +2

Query: 134 ETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAI 313
           ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++    + I
Sbjct: 9   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 67

Query: 314 YGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXXXXXXX 493
           YG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L            
Sbjct: 68  YGLIIAVIISTGI---NPKAKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIGIVGDA 119

Query: 494 AALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
              A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 120 GVRANAQQPKLFVGMILILIFAEALALYGLIVGII 154


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 93  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 152

Query: 332 IVIS 343
           I++S
Sbjct: 153 IILS 156

>sp|P59227|VATL1_ARATH Vacuolar ATP synthase 16 kDa proteolipid subunit 1/3/5 (V-ATPase 16
           kDa proteolipid subunit 1/3/5)
          Length = 164

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = +2

Query: 134 ETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAI 313
           ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++    + I
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 314 YGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXXXXXXX 493
           YG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L            
Sbjct: 67  YGLIIAVIISTGI---NPKAKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIGIVGDA 118

Query: 494 AALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
              A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 119 GVRANAQQPKLFVGMILILIFAEALALYGLIVGII 153


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 92  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 151

Query: 332 IVIS 343
           I++S
Sbjct: 152 IILS 155

>sp|Q43434|VATL_GOSHI Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 165

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = +2

Query: 134 ETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAI 313
           ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++    + I
Sbjct: 9   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 67

Query: 314 YGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXXXXXXX 493
           YG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L            
Sbjct: 68  YGLIIAVIISTGI---NPKAKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIGIVGDA 119

Query: 494 AALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
              A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 120 GVRANAQQPKLFVGMILILIFAEALALYGLIVGII 154


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 93  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 152

Query: 332 IVIS 343
           I++S
Sbjct: 153 IILS 156

>sp|O24011|VATL_LYCES Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 164

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = +2

Query: 134 ETSPYLWANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAI 313
           ET+P+ +  +G    +  S +GAA G   +G  +   GV  P +  K++V ++    + I
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 314 YGIIMAIVISQNIKSFDSKIASFRVLQINHEGGFRMFGSGLTVGLSNLXXXXXXXXXXXX 493
           YG+I+A++IS  I   + K  S+ +       G+    SGL  GL+ L            
Sbjct: 67  YGLIIAVIISTGI---NPKTKSYYLFD-----GYAHLSSGLACGLAGLSAGMAIGIVGDA 118

Query: 494 AALADSANASLFVKILIVEIFGSAIGLFGVIVGIL 598
              A++    LFV ++++ IF  A+ L+G+IVGI+
Sbjct: 119 GVRANAQQPKLFVGMILILIFAEALALYGLIVGII 153


 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = +2

Query: 152 WANIGIGLCISLSVLGAALGIYTTGSSILGAGVKTPRIRTKNLVSIIFCEAVAIYGIIMA 331
           +A++  GL   L+ L A + I   G + + A  + P++    ++ +IF EA+A+YG+I+ 
Sbjct: 92  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 151

Query: 332 IVIS 343
           I++S
Sbjct: 152 IILS 155

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,164,599
Number of Sequences: 369166
Number of extensions: 1455169
Number of successful extensions: 3914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3855
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6122130210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00545

Planaria EST Database

DrC_00545

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail