Planaria EST Database

DrC_00509

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00509
         (1323 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91V09|WD13_MOUSE  WD-repeat protein 13                        299   1e-80
sp|Q6DKP5|WDR13_PANTR  WD-repeat protein 13 >gi|20140804|sp|...   295   2e-79
sp|P61964|WDR5_HUMAN  WD-repeat protein 5 (BMP2-induced 3-kb...    63   2e-09
sp|P49695|PKWA_THECU  Probable serine/threonine-protein kina...    62   5e-09
sp|Q8YRI1|YY46_ANASP  Hypothetical WD-repeat protein alr3466       59   4e-08
sp|P39706|SWD1_YEAST  COMPASS component SWD1 (Complex protei...    57   9e-08
sp|Q9V3J8|WDS_DROME  Will die slowly protein                       55   5e-07
sp|Q23256|YH92_CAEEL  Hypothetical WD-repeat protein ZC302.2...    55   6e-07
sp|Q15291|RBBP5_HUMAN  Retinoblastoma-binding protein 5 (RBB...    52   3e-06
sp|O43017|SWD3_SCHPO  Set1 complex component swd3 (Set1C com...    51   7e-06

>sp|Q91V09|WD13_MOUSE WD-repeat protein 13
          Length = 485

 Score =  299 bits (765), Expect = 1e-80
 Identities = 160/353 (45%), Positives = 230/353 (65%), Gaps = 1/353 (0%)
 Frame = +2

Query: 2    TKIALASRALAGNDSVEEGYAFTGIKHIFD-HCSAGVNRIRFAHNNASRLAIGCEDGSLS 178
            T +A ASRA+AG+ S+ E YAF G+ H+FD H    V R+RFA+++  RLA    DGS+S
Sbjct: 139  TSVAEASRAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDDRHRLACCSLDGSIS 198

Query: 179  ICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYK 358
            +C   P     VL +++  H  G++D AWS +ND +++ S D+T+ +W  E     R   
Sbjct: 199  LCQLVP-APPTVLHVLRG-HTRGVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIP 256

Query: 359  ELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEES 538
            + + G E+L   FQP+NNNL V G +   + V+N+STGK VK G  KL G + AL+F+ +
Sbjct: 257  DPD-GAELLCCTFQPVNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFD-A 314

Query: 539  VGECLWIGNTQGIIQSYLFEVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLL 718
             G  LW G+ +G + S+LF++ TGK+T+AKRL V  +   ++S+ +R+W++REARDP LL
Sbjct: 315  PGRLLWAGDDRGSVFSFLFDMATGKLTKAKRLVVH-EGSPVTSISARSWVSREARDPSLL 373

Query: 719  VNASINSLLFFRIASSDGQIVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNV 898
            +NA +N LL +R+  ++G + LK  FPI  +   + S FCPL+SFRQGACVVTGSED  V
Sbjct: 374  INACLNKLLLYRVVDNEGALQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCV 433

Query: 899  LVFDVTAGQLNSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGHVILWKR 1057
              FDV      + K  +N LQGHS  V+DV+ +CDE +LAS D  G VI+W+R
Sbjct: 434  HFFDVE----RAAKAAVNKLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRR 482

>sp|Q6DKP5|WDR13_PANTR WD-repeat protein 13
 sp|Q9H1Z4|WD13_HUMAN WD-repeat protein 13
          Length = 485

 Score =  295 bits (756), Expect = 2e-79
 Identities = 159/353 (45%), Positives = 228/353 (64%), Gaps = 1/353 (0%)
 Frame = +2

Query: 2    TKIALASRALAGNDSVEEGYAFTGIKHIFD-HCSAGVNRIRFAHNNASRLAIGCEDGSLS 178
            T  A ASRA+AG+ S+ E YAF G+ H+FD H    V R+RFA+++  RLA    DGS+S
Sbjct: 139  TSAAEASRAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDDRHRLACCSLDGSIS 198

Query: 179  ICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYK 358
            +C   P     VL +++  H  G++D AWS +ND +++ S D+T+ +W  E     R   
Sbjct: 199  LCQLVP-APPTVLRVLRG-HTRGVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIP 256

Query: 359  ELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEES 538
            + +   E+L   FQP+NNNL V G +   + V+N+STGK VK G  KL G + AL+F+ +
Sbjct: 257  DPD-SAELLCCTFQPVNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFD-A 314

Query: 539  VGECLWIGNTQGIIQSYLFEVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLL 718
             G  LW G+ +G + S+LF++ TGK+T+AKRL V  +   ++S+ +R+W++REARDP LL
Sbjct: 315  PGRLLWAGDDRGSVFSFLFDMATGKLTKAKRLVVH-EGSPVTSISARSWVSREARDPSLL 373

Query: 719  VNASINSLLFFRIASSDGQIVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNV 898
            +NA +N LL +R+  ++G + LK  FPI  +   + S FCPL+SFRQGACVVTGSED  V
Sbjct: 374  INACLNKLLLYRVVDNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCV 433

Query: 899  LVFDVTAGQLNSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGHVILWKR 1057
              FDV      + K  +N LQGHS  V+DV+ +CDE +LAS D  G VI+W+R
Sbjct: 434  HFFDVE----RAAKAAVNKLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRR 482

>sp|P61964|WDR5_HUMAN WD-repeat protein 5 (BMP2-induced 3-kb gene protein)
 sp|P61965|WDR5_MOUSE WD-repeat protein 5 (BMP2-induced 3-kb gene protein) (WD-repeat
            protein BIG-3)
          Length = 334

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 2/275 (0%)
 Frame = +2

Query: 236  HKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNN 415
            HK GI+D+AWSS ++ +++AS D T+ +W+V S    +  K       +    F P  +N
Sbjct: 86   HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK--GHSNYVFCCNFNP-QSN 142

Query: 416  LFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYLF 595
            L V+G  D  +++ ++ TGK +K+        ++A+ F    G  +   +  G+ +  ++
Sbjct: 143  LIVSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRD-GSLIVSSSYDGLCR--IW 198

Query: 596  EVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSDGQ 775
            +  +G+    K L     P         +++        +L     N+L  +  +     
Sbjct: 199  DTASGQC--LKTLIDDDNPPV-------SFVKFSPNGKYILAATLDNTLKLWDYSKGK-- 247

Query: 776  IVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHCINV 955
              LK     ++ +  I ++F    S   G  +V+GSED  V ++++        K  +  
Sbjct: 248  -CLKTYTGHKNEKYCIFANF----SVTGGKWIVSGSEDNLVYIWNL------QTKEIVQK 296

Query: 956  LQGHSGAVIDVAVSCDELVLASC--DDKGHVILWK 1054
            LQGH+  VI  A    E ++AS   ++   + LWK
Sbjct: 297  LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331


 Score = 39.3 bits (90), Expect = 0.026
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
 Frame = +2

Query: 164 DGSL-------SICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLW 322
           DGSL        +C  W       L  + D     ++ + +S    +IL A+ D+T+ LW
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241

Query: 323 NVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVK 484
           +       + Y      K  +   F        V+G  D ++ + NL T + V+
Sbjct: 242 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 295

>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase pkwA
          Length = 742

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 2/274 (0%)
 Frame = +2

Query: 236  HKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNN 415
            H   +  +A+S     + + S D+TV LW+V +A    +++       +L + F P + +
Sbjct: 500  HTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHT--HYVLDIAFSP-DGS 556

Query: 416  LFVAGGSDGVIQVINLSTGK--AVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSY 589
            +  +G  DG  ++ N++TG   AV  G       + A+ F    G  +  G+  G I+  
Sbjct: 557  MVASGSRDGTARLWNVATGTEHAVLKGHTDY---VYAVAFSPD-GSMVASGSRDGTIR-- 610

Query: 590  LFEVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSD 769
            L++V TGK    +R  +      + SL         + D  +LV+ S +++  + +AS +
Sbjct: 611  LWDVATGK----ERDVLQAPAENVVSLAF-------SPDGSMLVHGSDSTVHLWDVASGE 659

Query: 770  GQIVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHCI 949
                 +      HT+ +   +F P      GA + +GS+D  + ++DV A + ++     
Sbjct: 660  ALHTFEG-----HTDWVRAVAFSP-----DGALLASGSDDRTIRLWDVAAQEEHT----- 704

Query: 950  NVLQGHSGAVIDVAVSCDELVLASCDDKGHVILW 1051
              L+GH+  V  VA   +   LAS  + G + +W
Sbjct: 705  -TLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737


 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 7/285 (2%)
 Frame = +2

Query: 80   HIFDHCSAGVNRIRFAHNNASRLAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDL 259
            H  +  +  V  + F+ + A  LA G +D ++ +      +E  V     + H   + D+
Sbjct: 495  HTLEGHTDWVRAVAFSPDGAL-LASGSDDATVRLWDVAAAEERAVF----EGHTHYVLDI 549

Query: 260  AWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSD 439
            A+S     + + SRD T  LWNV + +   + K       +  V F P + ++  +G  D
Sbjct: 550  AFSPDGSMVASGSRDGTARLWNVATGTEHAVLK--GHTDYVYAVAFSP-DGSMVASGSRD 606

Query: 440  GVIQVINLSTGKAVKSGRDKL---GGMITALTFEESVGECLWIGNTQGIIQSYLFEVGTG 610
            G I++ +++TGK     RD L      + +L F    G  L  G+   +   +L++V +G
Sbjct: 607  GTIRLWDVATGKE----RDVLQAPAENVVSLAFSPD-GSMLVHGSDSTV---HLWDVASG 658

Query: 611  KITRAKRLTVSTKPCTISSLQSRA-WINREARDP--CLLVNASIN-SLLFFRIASSDGQI 778
            +               + + +    W+   A  P   LL + S + ++  + +A+ +   
Sbjct: 659  E--------------ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHT 704

Query: 779  VLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDV 913
             L+      HTE +   +F P     +G  + + SEDG + ++ +
Sbjct: 705  TLEG-----HTEPVHSVAFHP-----EGTTLASASEDGTIRIWPI 739


 Score = 33.5 bits (75), Expect = 1.4
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +2

Query: 860  GACVVTGSEDGNVLVFDVTAGQLNSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGH 1039
            G+ +  GS D  + V+DV +G        ++ L+GH+  V  VA S D  +LAS  D   
Sbjct: 471  GSLLAGGSGDKLIHVWDVASGDE------LHTLEGHTDWVRAVAFSPDGALLASGSDDAT 524

Query: 1040 VILW 1051
            V LW
Sbjct: 525  VRLW 528

>sp|Q8YRI1|YY46_ANASP Hypothetical WD-repeat protein alr3466
          Length = 1526

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
 Frame = +2

Query: 107  VNRIRFAHNNASRLAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFI 286
            VN + F+ + A+ LA G  D ++ +   W       L I++  H S +  + ++     +
Sbjct: 1161 VNAVAFSPDGAT-LASGSGDQTVRL---WDISSSKCLYILQG-HTSWVNSVVFNPDGSTL 1215

Query: 287  LTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLS 466
             + S D TV LW + S+     ++       + +V F P + ++  +G SD  +++ ++S
Sbjct: 1216 ASGSSDQTVRLWEINSSKCLCTFQGHT--SWVNSVVFNP-DGSMLASGSSDKTVRLWDIS 1272

Query: 467  TGKAVKSGRDKL-----------GGMI-------TALTFEESVGECL--WIGNTQGIIQS 586
            + K + + +              G M+       T   +E S  +CL  + G+T  +   
Sbjct: 1273 SSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSV 1332

Query: 587  YLFEVGT----GKITRAKRL-TVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFF 751
                 GT    G   +  RL ++S+  C  + L    W+      P   + AS +     
Sbjct: 1333 TFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTV 1392

Query: 752  RIAS-SDGQIVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQL 928
            R+ S S G+ +   +    H   +    F P      G  + +GS+D  V ++++++G+ 
Sbjct: 1393 RLWSISSGKCLYTLQ---GHNNWVGSIVFSP-----DGTLLASGSDDQTVRLWNISSGE- 1443

Query: 929  NSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGHVILW 1051
                 C+  L GH  +V  VA S D L+LAS  D   + LW
Sbjct: 1444 -----CLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479


 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 59/272 (21%), Positives = 103/272 (37%)
 Frame = +2

Query: 236  HKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNN 415
            H S +  + +S     + + S D TV LW++ S    + +K       + +V F P N+ 
Sbjct: 905  HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK--GHTSRVRSVVFSP-NSL 961

Query: 416  LFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYLF 595
            +  +G SD  +++ ++S+G+ +               F+   G   W+ +    +   + 
Sbjct: 962  MLASGSSDQTVRLWDISSGECL-------------YIFQGHTG---WVYSVAFNLDGSML 1005

Query: 596  EVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSDGQ 775
              G+G  T         +   ISS Q            C  +     S +   + SSDG 
Sbjct: 1006 ATGSGDQT--------VRLWDISSSQ------------CFYIFQGHTSCVRSVVFSSDG- 1044

Query: 776  IVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHCINV 955
                                         A + +GS+D  V ++D+++G      +C+  
Sbjct: 1045 -----------------------------AMLASGSDDQTVRLWDISSG------NCLYT 1069

Query: 956  LQGHSGAVIDVAVSCDELVLASCDDKGHVILW 1051
            LQGH+  V  V  S D  +LAS  D   V LW
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101


 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 80/346 (23%), Positives = 140/346 (40%), Gaps = 30/346 (8%)
 Frame = +2

Query: 107  VNRIRFAHNNASRLAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFI 286
            VN + F+ +    LA G +D ++ +   W       L   K  H S +  + +S  +  +
Sbjct: 909  VNSVGFSQDG-KMLASGSDDQTVRL---WDISSGQCLKTFKG-HTSRVRSVVFSPNSLML 963

Query: 287  LTASRDSTVCLWNVESASLARIYKE----------------LNVGKEILTVEFQPMNNN- 415
             + S D TV LW++ S     I++                 L  G    TV    ++++ 
Sbjct: 964  ASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023

Query: 416  --LFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWI--GNTQGIIQ 583
                  G +  V  V+  S G  + SG D      T   ++ S G CL+   G+T   ++
Sbjct: 1024 CFYIFQGHTSCVRSVVFSSDGAMLASGSDDQ----TVRLWDISSGNCLYTLQGHTS-CVR 1078

Query: 584  SYLFE-----VGTGKITRAKRL-TVSTKPCTISSLQSRAWINREARDP--CLLVNASINS 739
            S +F      + +G   +  RL  +S+  C  +     +W+      P    L N S + 
Sbjct: 1079 SVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQ 1138

Query: 740  LL-FFRIASSDGQIVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVT 916
            ++  + I+S      L+      HT  +   +F P      GA + +GS D  V ++D++
Sbjct: 1139 IVRLWDISSKKCLYTLQG-----HTNWVNAVAFSP-----DGATLASGSGDQTVRLWDIS 1188

Query: 917  AGQLNSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGHVILWK 1054
            + +      C+ +LQGH+  V  V  + D   LAS      V LW+
Sbjct: 1189 SSK------CLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE 1228


 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 77/363 (21%), Positives = 149/363 (41%), Gaps = 38/363 (10%)
 Frame = +2

Query: 80   HIFDHCSAGVNRIRFAHNNASRLAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDL 259
            +IF   +  V  + F + + S LA G  D ++ +   W         I +  H S +  +
Sbjct: 984  YIFQGHTGWVYSVAF-NLDGSMLATGSGDQTVRL---WDISSSQCFYIFQG-HTSCVRSV 1038

Query: 260  AWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSD 439
             +SS    + + S D TV LW++ S +   +Y        + +V F P +  +  +GG D
Sbjct: 1039 VFSSDGAMLASGSDDQTVRLWDISSGNC--LYTLQGHTSCVRSVVFSP-DGAMLASGGDD 1095

Query: 440  GVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYLFEVGTGKIT 619
             ++++ ++S+G  + + +      +  L F  + G  L  G++  I++ +          
Sbjct: 1096 QIVRLWDISSGNCLYTLQGYTS-WVRFLVFSPN-GVTLANGSSDQIVRLW---------- 1143

Query: 620  RAKRLTVSTKPCTISSLQSRAWINREARDP-----------------------CLLV--- 721
                  +S+K C  +      W+N  A  P                       CL +   
Sbjct: 1144 -----DISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQG 1198

Query: 722  -NASINSLLF------FRIASSDGQIVLKNKFPIRHTEKII----HSSFCPLISFR-QGA 865
              + +NS++F          SSD  + L   + I  ++ +     H+S+   + F   G+
Sbjct: 1199 HTSWVNSVVFNPDGSTLASGSSDQTVRL---WEINSSKCLCTFQGHTSWVNSVVFNPDGS 1255

Query: 866  CVVTGSEDGNVLVFDVTAGQLNSPKHCINVLQGHSGAVIDVAVSCDELVLASCDDKGHVI 1045
             + +GS D  V ++D+++ +      C++  QGH+  V  VA + D  +LAS      V 
Sbjct: 1256 MLASGSSDKTVRLWDISSSK------CLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVR 1309

Query: 1046 LWK 1054
            LW+
Sbjct: 1310 LWE 1312

>sp|P39706|SWD1_YEAST COMPASS component SWD1 (Complex proteins associated with SET1 protein
            SWD1) (Set1C component SWD1)
          Length = 426

 Score = 57.4 bits (137), Expect = 9e-08
 Identities = 73/324 (22%), Positives = 131/324 (40%), Gaps = 19/324 (5%)
 Frame = +2

Query: 146  LAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLWN 325
            LA+GC +G+L I     F+  CV   M   H   IT +AWS     +LT+SRD ++ LW+
Sbjct: 41   LALGCANGALVIYDMDTFRPICVPGNMLGAHVRPITSIAWSPDGRLLLTSSRDWSIKLWD 100

Query: 326  VESASLARIYKELNVGKEILTVEFQPMNNNLFVAG------------GSDGVIQVINLST 469
            +   S  +  KE+     I   ++      L VA              +D V  +++ S 
Sbjct: 101  LSKPS--KPLKEIRFDSPIWGCQWLDAKRRLCVATIFEESDAYVIDFSNDPVASLLSKSD 158

Query: 470  GKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYLFE--VGTGKITRAKRLTVS 643
             K + S  D   G +   T        + +G ++G +  Y F     T  I   K  + +
Sbjct: 159  EKQLSSTPDH--GYVLVCTVHTKHPNIIIVGTSKGWLDFYKFHSLYQTECIHSLKITSSN 216

Query: 644  TKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSDGQIVLKNKFPIRHTEKII 823
             K   +S    R           L +N S  ++  + I+  D    ++     ++ + I 
Sbjct: 217  IKHLIVSQNGER-----------LAINCSDRTIRQYEISIDDENSAVELTLEHKYQDVIN 265

Query: 824  HSSF-CPLISFRQGACVVT---GSEDGNVLVFDVTAGQLNSPKHCINVLQGHSGAVIDVA 991
               + C L S      +V    GS    + +++ T+G L      + VL+G    +ID+ 
Sbjct: 266  KLQWNCILFSNNTAEYLVASTHGSSAHELYIWETTSGTL------VRVLEGAEEELIDIN 319

Query: 992  VSCDEL-VLASCDDKGHVILWKRV 1060
                 + ++++  + G+V +W  V
Sbjct: 320  WDFYSMSIVSNGFESGNVYVWSVV 343

>sp|Q9V3J8|WDS_DROME Will die slowly protein
          Length = 361

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
 Frame = +2

Query: 236  HKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNNN 415
            HK GI+D+AWSS +  +++ S D T+ +W + +    +  K       +    F P  +N
Sbjct: 113  HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK--GHSNYVFCCNFNP-QSN 169

Query: 416  LFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYLF 595
            L V+G  D  +++ ++ TGK +K+        ++A+ F    G  +   +  G+ +  ++
Sbjct: 170  LIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRD-GSLIVSSSYDGLCR--IW 225

Query: 596  EVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSDGQ 775
            +  +G+    K L     P         +++        +L     N+L  +  +     
Sbjct: 226  DTASGQC--LKTLIDDDNPPV-------SFVKFSPNGKYILAATLDNTLKLWDYSKGK-- 274

Query: 776  IVLKNKFPIRHTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHCINV 955
              LK     ++ +  I ++F    S   G  +V+GSED  V ++++ +      K  +  
Sbjct: 275  -CLKTYTGHKNEKYCIFANF----SVTGGKWIVSGSEDNMVYIWNLQS------KEVVQK 323

Query: 956  LQGHSGAVIDVAVSCDELVLASC--DDKGHVILWK 1054
            LQGH+  V+  A    E ++AS   ++   + LWK
Sbjct: 324  LQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358


 Score = 38.1 bits (87), Expect = 0.057
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
 Frame = +2

Query: 164 DGSL-------SICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLW 322
           DGSL        +C  W       L  + D     ++ + +S    +IL A+ D+T+ LW
Sbjct: 209 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 268

Query: 323 NVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVK 484
           +       + Y      K  +   F        V+G  D ++ + NL + + V+
Sbjct: 269 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQ 322

>sp|Q23256|YH92_CAEEL Hypothetical WD-repeat protein ZC302.2 in chromosome V
          Length = 501

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 4/339 (1%)
 Frame = +2

Query: 53   EGYAFTGIKHIFDHCSAGVNRIRFAHNNASRLAIGCEDGSLSICCTWPFQEECVLAIMKD 232
            E   F+ +K I  H  + V+ I+F++     L  G  D  + +  T        LA    
Sbjct: 199  ENGEFSLVKTISGHTKS-VSVIKFSYCG-KYLGTGSADKQIKVWNTVDMTYLQTLA---- 252

Query: 233  QHKSGITDLAWSSANDFILTASRDSTVCLWNVESASLARIYKELNVGKEILTVEFQPMNN 412
             H+ GI D +WSS + FI +AS D+TV +++V S +  R  +       +    F P  +
Sbjct: 253  SHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMR--GHTNYVFCCSFNP-QS 309

Query: 413  NLFVAGGSDGVIQVINLSTGKAVKSGRDKLGGMITALTFEESVGECLWIGNTQGIIQSYL 592
            +L  + G D  ++V +  TG  VK         IT++++    G  +   +  G I+  +
Sbjct: 310  SLIASAGFDETVRVWDFKTGLCVKC-IPAHSDPITSISYNHD-GNTMATSSYDGCIR--V 365

Query: 593  FEVGTGKITRAKRLTVSTKPCTISSLQSRAWINREARDPCLLVNASINSLLFFRIASSDG 772
            ++  +G   +     V T    ++ +             C   N     LL  ++ SS  
Sbjct: 366  WDAASGSCLKT---LVDTDHAPVTFV-------------CFSPNGKY--LLSAQLDSSLK 407

Query: 773  QIVLKNKFPIRHTEKIIHSSFCPL--ISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHC 946
                K   P+++     +  +C    +S   G  +++GSEDG +LV+ +   Q+      
Sbjct: 408  LWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQI------ 461

Query: 947  INVLQGHSGAVI--DVAVSCDELVLASCDDKGHVILWKR 1057
            + +L+GH+  V+  D   + + +     +    + +W+R
Sbjct: 462  VQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIWRR 500

>sp|Q15291|RBBP5_HUMAN Retinoblastoma-binding protein 5 (RBBP-5) (Retinoblastoma-binding
            protein RBQ-3)
          Length = 538

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 8/310 (2%)
 Frame = +2

Query: 146  LAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTVCLWN 325
            LA+GC DG + I   W F    +  I+   H   +  L WS     +++AS D+ V  W+
Sbjct: 39   LAVGCNDGRIVI---WDFLTRGIAKIIS-AHIHPVCSLCWSRDGHKLVSASTDNIVSQWD 94

Query: 326  VESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVKSGRDKLG 505
            V S    + ++       IL V++ P + N  +         ++ LS  K V    D   
Sbjct: 95   VLSGDCDQRFR---FPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDS 151

Query: 506  GMITALTFEESVGECLWIGNTQGIIQSYLFEVGTGKITRAKRLTVSTKPCTISSLQSRAW 685
             +    +F+   GE ++ GN +G I   + +  +  +  + R+T  T   T  +++S   
Sbjct: 152  DLNVVASFDRR-GEYIYTGNAKGKI--LVLKTDSQDLVASFRVTTGTSNTT--AIKS--- 203

Query: 686  INREARDPCLLVNASINSLLFFRIASSDGQIVLK-----NKFPIRHTEKIIHSSFCPLIS 850
            I    +  C L+N +   +  +     DG+ +L         P++  + +++ +      
Sbjct: 204  IEFARKGSCFLINTADRIIRVY-----DGREILTCGRDGEPEPMQELQDLVNRTPWKKCC 258

Query: 851  FR-QGACVVTGSEDGNVL-VFDVTAGQLNSPKHCINVLQGHSG-AVIDVAVSCDELVLAS 1021
            F   G  +V GS   + L +++ + G L      + +L G  G  ++DVA      ++AS
Sbjct: 259  FSGDGEYIVAGSARQHALYIWEKSIGNL------VKILHGTRGELLLDVAWHPVRPIIAS 312

Query: 1022 CDDKGHVILW 1051
                G V +W
Sbjct: 313  I-SSGVVSIW 321

>sp|O43017|SWD3_SCHPO Set1 complex component swd3 (Set1C component swd3) (COMPASS
           component swd3) (Complex proteins associated with set1
           protein swd3)
          Length = 380

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 30/117 (25%), Positives = 56/117 (47%)
 Frame = +2

Query: 134 NASRLAIGCEDGSLSICCTWPFQEECVLAIMKDQHKSGITDLAWSSANDFILTASRDSTV 313
           N   +A    DG++ I     F+ EC L      H  GI+ + W++ + ++ +AS D T+
Sbjct: 65  NKRWIATSSSDGTIKIWSALTFRLECTLF----GHYRGISQVKWATGSKYLASASDDKTI 120

Query: 314 CLWNVESASLARIYKELNVGKEILTVEFQPMNNNLFVAGGSDGVIQVINLSTGKAVK 484
            +W+ E     R  K       + +++F P+   L V+G  D  +++ NL  G  ++
Sbjct: 121 RIWDFEKRCSVRCLK--GHTNYVSSIDFNPL-GTLLVSGSWDETVRIWNLQDGTCLR 174


 Score = 36.6 bits (83), Expect = 0.17
 Identities = 23/82 (28%), Positives = 38/82 (46%)
 Frame = +2

Query: 806  HTEKIIHSSFCPLISFRQGACVVTGSEDGNVLVFDVTAGQLNSPKHCINVLQGHSGAVID 985
            HT  +    F PL     G  +V+GS D  V ++++  G       C+ +L  HS  +I 
Sbjct: 137  HTNYVSSIDFNPL-----GTLLVSGSWDETVRIWNLQDGT------CLRMLPAHSEPIIS 185

Query: 986  VAVSCDELVLASCDDKGHVILW 1051
            V++S D  + A+    G   +W
Sbjct: 186  VSISADGTLCATASYDGMARIW 207

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,291,058
Number of Sequences: 369166
Number of extensions: 2998237
Number of successful extensions: 8682
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8502
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15418231940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00509

  1. Dr_sW_013_G09
  2. Dr_sW_028_B23
  3. Dr_sW_024_F19