Planaria EST Database

DrC_00461

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00461
         (1490 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05214|TBA3_MOUSE  Tubulin alpha-3/alpha-7 chain (Alpha-t...   573   e-163
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       573   e-163
sp|Q94572|TBA3_HOMAM  Tubulin alpha-3 chain (Alpha-III tubulin)   573   e-163
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       572   e-162
sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               572   e-162
sp|P36220|TBA_TORMA  Tubulin alpha chain (Alpha T6)               570   e-162
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        570   e-162
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   570   e-162
sp|Q91060|TBA_NOTVI  Tubulin alpha chain                          570   e-162
sp|Q8T6A5|TBA1_APLCA  Tubulin alpha-1 chain                       570   e-162

>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
            isotype M-alpha-3/7)
 sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
 sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 450

 Score =  573 bits (1478), Expect = e-163
 Identities = 278/300 (92%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACCMLYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  249 bits (637), Expect = 1e-65
 Identities = 116/125 (92%), Positives = 122/125 (97%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLAD C
Sbjct: 70  LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  573 bits (1477), Expect = e-163
 Identities = 279/300 (93%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VSEITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACC+LYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  253 bits (645), Expect = 1e-66
 Identities = 117/125 (93%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE++D+VLDRIRKLADQC
Sbjct: 70  LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin)
          Length = 451

 Score =  573 bits (1476), Expect = e-163
 Identities = 278/300 (92%), Positives = 285/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ+ATAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVSEITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACC+LYRGDVVPKDVNAAIA+IKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKV 
Sbjct: 313  MACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVS 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 432


 Score =  245 bits (626), Expect = 2e-64
 Identities = 112/125 (89%), Positives = 119/125 (95%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AG QMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFF ETG GKHVPRAVF+D
Sbjct: 10  GQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTV+DE+RTG YRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLAD C
Sbjct: 70  LEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 AGLQG 134

>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  572 bits (1474), Expect = e-162
 Identities = 277/300 (92%), Positives = 285/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSV+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACCMLYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  252 bits (643), Expect = 2e-66
 Identities = 116/125 (92%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK++GGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLADQC
Sbjct: 70  LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  572 bits (1473), Expect = e-162
 Identities = 277/300 (92%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            M+CCMLYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  254 bits (648), Expect = 6e-67
 Identities = 118/125 (94%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI+D+VLDRIRKLADQC
Sbjct: 70  LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
          Length = 451

 Score =  570 bits (1469), Expect = e-162
 Identities = 275/300 (91%), Positives = 285/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACC+LYRGDVVPKDVNAAIA+IKTKRSIQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432


 Score =  251 bits (642), Expect = 3e-66
 Identities = 115/125 (92%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70  LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  570 bits (1469), Expect = e-162
 Identities = 276/300 (92%), Positives = 284/300 (94%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSV+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACCMLYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  251 bits (640), Expect = 5e-66
 Identities = 115/125 (92%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDR+RKL+DQC
Sbjct: 70  LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
            M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  570 bits (1469), Expect = e-162
 Identities = 274/300 (91%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACC+LYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432


 Score =  251 bits (642), Expect = 3e-66
 Identities = 115/125 (92%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70  LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|Q91060|TBA_NOTVI Tubulin alpha chain
          Length = 450

 Score =  570 bits (1469), Expect = e-162
 Identities = 275/300 (91%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFL+FH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRLI QIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEP NQMVKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACC+LYRGDVVPKDVNAAIA+IKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ
Sbjct: 313  MACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432


 Score =  248 bits (632), Expect = 4e-65
 Identities = 112/125 (89%), Positives = 122/125 (97%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRA+F+D
Sbjct: 10  GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEP+V+DEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYT+GKEI+D VLDR+RKLADQC
Sbjct: 70  LEPSVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLDRMRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
          Length = 451

 Score =  570 bits (1469), Expect = e-162
 Identities = 276/300 (92%), Positives = 286/300 (95%)
 Frame = +2

Query: 407  KGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTH 586
            +GFLIFH            LLMERLSVDYGKKSKLEF+VYPAPQ++TAVVEPYNSILTTH
Sbjct: 133  QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTH 192

Query: 587  TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 766
            TTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITASLRFDGALNVDL
Sbjct: 193  TTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 252

Query: 767  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPNNQMVKCDPRHGKY 946
            TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEP NQ+VKCDPRHGKY
Sbjct: 253  TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKY 312

Query: 947  MACCMLYRGDVVPKDVNAAIASIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQ 1126
            MACCMLYRGDVVPKDVNAAIA+IKTKR+IQFVDWCPTGFKVGINYQPPT VPGGDLAKVQ
Sbjct: 313  MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372

Query: 1127 RALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1306
            RA+CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373  RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432


 Score =  248 bits (634), Expect = 2e-65
 Identities = 114/125 (91%), Positives = 123/125 (98%)
 Frame = +1

Query: 37  G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
           G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10  GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69

Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
           LEP+VVDEVR+GTYRQLFHPEQLITGKEDAANNYARGHYTVGKE++D+VLDRIRKLADQC
Sbjct: 70  LEPSVVDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 129

Query: 397 SGLQG 411
           +GLQG
Sbjct: 130 TGLQG 134

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,972,236
Number of Sequences: 369166
Number of extensions: 3823799
Number of successful extensions: 11118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10610
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 17949083355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00461

  1. Dr_sW_002_L05
  2. Dr_sW_012_D17
  3. Dr_sW_027_J20
  4. Dr_sW_020_G07