DrC_00406
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00406 (1232 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q22494|VATH2_CAEEL Probable vacuolar ATP synthase subuni... 369 e-101 sp|Q8BVE3|VATH_MOUSE Vacuolar ATP synthase subunit H (V-ATP... 358 2e-98 sp|Q9U5N0|VATH_MANSE Vacuolar ATP synthase subunit H (V-ATP... 357 5e-98 sp|Q9UI12|VATH_HUMAN Vacuolar ATP synthase subunit H (V-ATP... 354 3e-97 sp|Q9TVC1|VATH_PIG Vacuolar ATP synthase subunit H (V-ATPas... 353 6e-97 sp|Q9V3J1|VATH_DROME Vacuolar ATP synthase subunit H (V-ATP... 353 6e-97 sp|O46563|VATH_BOVIN Vacuolar ATP synthase subunit H (V-ATP... 348 2e-95 sp|Q20666|VATH1_CAEEL Probable vacuolar ATP synthase subuni... 248 3e-65 sp|Q9LX65|VATH_ARATH Probable vacuolar ATP synthase subunit... 149 2e-35 sp|O14265|VATH_SCHPO Vacuolar ATP synthase subunit H (V-ATP... 121 5e-27
>sp|Q22494|VATH2_CAEEL Probable vacuolar ATP synthase subunit H 2 (V-ATPase H subunit 2) (Vacuolar proton pump H subunit 2) (Vacuolar proton pump subunit SFD 2) Length = 470 Score = 369 bits (947), Expect = e-101 Identities = 191/397 (48%), Positives = 270/397 (68%), Gaps = 5/397 (1%) Frame = +2 Query: 56 AIGYLQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHN-- 229 A LQ +A E+R K NW SY + Q I D Y FI ++ A + E RD ++ + N Sbjct: 17 ATSRLQLEAQELRNNKPNWGSYFRSQMIQEDDYNFITSFENAKSKEERDQVLAANNANGQ 76 Query: 230 AAKMFIFLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRR 409 AAK L+ ++A +Q ++Y+LT+ DDMLQEDK +VE+F A+ K ++ + L+R Sbjct: 77 AAKTMANLITQVAKDQNVRYVLTLFDDMLQEDKSRVELFHSAAARQKRTVWSQYLGILQR 136 Query: 410 ENKFIAYQASRIIAKIACWSSQLMETKDLQYFLRWIQDQFR-FPDNEYMQTVARNLQMML 586 ++ FI Q S IIAK+AC+ + ME +DLQY+ ++++Q + N+YM T AR LQMML Sbjct: 137 QDNFIVNQMSSIIAKLACFGTTRMEGQDLQYYFSFLKEQLKNSTTNDYMNTTARCLQMML 196 Query: 587 RIRQYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVIQIIKTPSL--I 760 R +YR FV+ GV+T+V AL GK N Q+QYQLIF +WCL+F+ADI K PSL I Sbjct: 197 RHDEYRHEFVDSDGVQTLVTALNGKTNFQLQYQLIFAVWCLTFNADIAR---KAPSLGLI 253 Query: 761 SVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQLELLQQKDY 940 + DI+ ++ +EK+IR+ LA F +L K+ + RE AL MVQCK +K LEL+ K Y Sbjct: 254 QALGDILSESTKEKVIRIILASFVNILSKVDEREVKREAALQMVQCKTLKTLELMDAKKY 313 Query: 941 SHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWRENADKFLD 1120 DP+L DD+ +L E+L+ SV D+SS +EY E++SGRL+WSPVHK+EKFWRENA KF D Sbjct: 314 D-DPDLEDDVKFLTEELTLSVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFND 372 Query: 1121 KNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 K FE++K+L++LL++S DP++L VA HD+GE+V HYP Sbjct: 373 KQFEVVKILIKLLESSHDPLILCVASHDIGEYVRHYP 409
>sp|Q8BVE3|VATH_MOUSE Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) Length = 483 Score = 358 bits (918), Expect = 2e-98 Identities = 183/406 (45%), Positives = 267/406 (65%), Gaps = 18/406 (4%) Frame = +2 Query: 68 LQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMFI 247 + A+AAE+R K+NW SYLQGQ IS + FI +++ +SE + +++ AK FI Sbjct: 19 IAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSSEDKQEMLQTEGSQCAKTFI 78 Query: 248 FLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFIA 427 L+ ++ EQT+QY+LTM+DDMLQE+ Q+V IF Y ++K + F L R++ F Sbjct: 79 NLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTV 138 Query: 428 YQASRIIAKIACWSSQLMETKDLQYFLRWIQDQF------------------RFPDNEYM 553 + A+RIIAK+A W +LME DL Y+ WI+ Q ++Y+ Sbjct: 139 HMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTISSSDSSQYV 198 Query: 554 QTVARNLQMMLRIRQYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVI 733 Q VA LQ+MLR+ +YR +VE GV I+ L K Q+QYQ+IF +W L+F + Sbjct: 199 QCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQ-MC 257 Query: 734 QIIKTPSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQ 913 + ++ ++I V+SDI++++ +EK+ R+ LA FR LEK + + +E ALAM+QCK++KQ Sbjct: 258 EHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQ 317 Query: 914 LELLQQKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFW 1093 LE L+Q+ Y D ++++D+ +L EKL SV+D+SS +EY+ ELKSGRLEWSPVHK+EKFW Sbjct: 318 LENLEQQKYD-DEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFW 376 Query: 1094 RENADKFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 RENA + +KN+ELLK+L +LL+ S DP VL VA HDVGE+V HYP Sbjct: 377 RENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYP 422
>sp|Q9U5N0|VATH_MANSE Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 475 Score = 357 bits (915), Expect = 5e-98 Identities = 175/392 (44%), Positives = 271/392 (69%) Frame = +2 Query: 56 AIGYLQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAA 235 A LQ +A+EIR +INW SYLQGQ I+ + FI+ D+ + D ++P A Sbjct: 26 ATSVLQIRASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRGQKDLPD----KNPDACA 81 Query: 236 KMFIFLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRREN 415 +F+ LL ++ + TIQY+L +IDD+L EDK +V+IFR K ++ + F L R++ Sbjct: 82 DVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE--TKYSGNIWQPFLNLLNRQD 139 Query: 416 KFIAYQASRIIAKIACWSSQLMETKDLQYFLRWIQDQFRFPDNEYMQTVARNLQMMLRIR 595 +F+ + +RIIAK+ACW QLM+ DL ++L W++DQ + +N+Y+Q+VAR LQMMLR+ Sbjct: 140 EFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKMNNNDYIQSVARCLQMMLRVD 199 Query: 596 QYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVIQIIKTPSLISVVSD 775 +YR F+ G+ T+++ L ++N Q+QYQL+FCLW L+F+ ++ + + + I +++D Sbjct: 200 EYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLWVLTFN-PLLAEKMNKFNAIPILAD 258 Query: 776 IIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQLELLQQKDYSHDPE 955 I+ + +EK+ R+ LA+FR L+EK +Q +E +AMVQCK++KQL +L+QK S D + Sbjct: 259 ILSDSVKEKVTRIVLAVFRNLIEKPQDQQVAKEHCIAMVQCKVLKQLSILEQK-RSDDED 317 Query: 956 LTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWRENADKFLDKNFEL 1135 + +D+ +L E+L +SV+D+SS ++Y E+KSGRLEWSPVHK+ KFWRENA + ++ EL Sbjct: 318 IMNDVEFLNERLQASVQDLSSFDQYATEVKSGRLEWSPVHKSAKFWRENAARLNERGQEL 377 Query: 1136 LKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 L+ LV LL+ S DP+VL VA +DVGE+V HYP Sbjct: 378 LRTLVHLLEKSHDPVVLAVACYDVGEYVRHYP 409
>sp|Q9UI12|VATH_HUMAN Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) (VMA13) (Nef binding protein 1) (NBP1) Length = 483 Score = 354 bits (909), Expect = 3e-97 Identities = 182/406 (44%), Positives = 265/406 (65%), Gaps = 18/406 (4%) Frame = +2 Query: 68 LQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMFI 247 + A+AAE+R K+NW SYLQGQ IS + FI +++ + E + +++ AK FI Sbjct: 19 IAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFI 78 Query: 248 FLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFIA 427 L+ + EQT+QY+LTM+DDMLQE+ Q+V IF Y +K++ F L R++ F Sbjct: 79 NLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTV 138 Query: 428 YQASRIIAKIACWSSQLMETKDLQYFLRWIQDQF------------------RFPDNEYM 553 + A+RIIAK+A W +LME DL Y+ WI+ Q ++Y+ Sbjct: 139 HMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYV 198 Query: 554 QTVARNLQMMLRIRQYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVI 733 Q VA LQ+MLR+ +YR +VE GV I+ L K Q+QYQ+IF +W L+F + Sbjct: 199 QCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQ-MC 257 Query: 734 QIIKTPSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQ 913 + ++ ++I V+SDI++++ +EK+ R+ LA FR LEK + + +E ALAM+QCK++KQ Sbjct: 258 EHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQ 317 Query: 914 LELLQQKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFW 1093 LE L+Q+ Y D ++++D+ +L EKL SV+D+SS +EY+ ELKSGRLEWSPVHK+EKFW Sbjct: 318 LENLEQQKYD-DEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFW 376 Query: 1094 RENADKFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 RENA + +KN+ELLK+L +LL+ S DP VL VA HDVGE+V HYP Sbjct: 377 RENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYP 422
>sp|Q9TVC1|VATH_PIG Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 353 bits (906), Expect = 6e-97 Identities = 180/406 (44%), Positives = 266/406 (65%), Gaps = 18/406 (4%) Frame = +2 Query: 68 LQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMFI 247 + A+AAE+R K+NW SYLQGQ IS + FI +++ + E + +++ AK FI Sbjct: 19 IAAKAAEVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFI 78 Query: 248 FLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFIA 427 L+ ++ EQT+QY+LTM+DD LQE+ Q+V IF Y ++K++ F L R++ F Sbjct: 79 NLMTHISKEQTVQYILTMVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTV 138 Query: 428 YQASRIIAKIACWSSQLMETKDLQYFLRWIQDQF------------------RFPDNEYM 553 + A+RIIAK+A W +LME DL Y+ WI+ Q ++Y+ Sbjct: 139 HMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLASQKLRGSGVAVETGTVSSSDSSQYV 198 Query: 554 QTVARNLQMMLRIRQYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVI 733 Q VA LQ+MLR+ +YR +VE GV I+ L K Q+QYQ+IF +W L+F + Sbjct: 199 QCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQ-MC 257 Query: 734 QIIKTPSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQ 913 + ++ ++I V+SDI++++ +EK+ R+ LA FR LEK + + +E ALA++QCK++KQ Sbjct: 258 EHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALALIQCKVLKQ 317 Query: 914 LELLQQKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFW 1093 LE L+Q+ Y D ++++D+ +L EKL SV+D+SS +EY+ ELKSGRLEWSPVHK+EKFW Sbjct: 318 LENLEQQKYD-DEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFW 376 Query: 1094 RENADKFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 RENA + +KN+ELLK+L +LL+ S DP VL VA HDVGE+V HYP Sbjct: 377 RENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYP 422
>sp|Q9V3J1|VATH_DROME Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 468 Score = 353 bits (906), Expect = 6e-97 Identities = 174/392 (44%), Positives = 266/392 (67%) Frame = +2 Query: 56 AIGYLQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAA 235 A LQ QAA+IR INW+SY+Q Q IS + Y I D++ R + + ++ Sbjct: 17 ATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISALDKS-----RASFLAQNSSQVV 71 Query: 236 KMFIFLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRREN 415 K + L++ ++ + TIQY+L ++DD+LQED+ +V++F K K + F L R++ Sbjct: 72 KTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQD 131 Query: 416 KFIAYQASRIIAKIACWSSQLMETKDLQYFLRWIQDQFRFPDNEYMQTVARNLQMMLRIR 595 FI +SRI+AK ACW + M DL ++L++++DQ +NEY+Q+VAR LQMMLR+ Sbjct: 132 GFIVNMSSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNNNEYIQSVARCLQMMLRVD 191 Query: 596 QYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVIQIIKTPSLISVVSD 775 +YR FV G+ T++ L ++N Q+QYQLIFCLW L+F+ + ++ K S+I +++D Sbjct: 192 EYRFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKF-SVIPILAD 250 Query: 776 IIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQLELLQQKDYSHDPE 955 I+ +EK+ R+ LA+FR L+EK + + ++ +AMVQCK++KQL +L+Q+ + D + Sbjct: 251 ILSDCAKEKVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFD-DED 309 Query: 956 LTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWRENADKFLDKNFEL 1135 +T D+ YL EKL +SV+D+SS +EY E++SGRLEWSPVHK+ KFWRENA + +KN+EL Sbjct: 310 ITADVEYLSEKLQNSVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYEL 369 Query: 1136 LKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 L++LV LL+TSKD I+L VA D+GE+V HYP Sbjct: 370 LRILVHLLETSKDAIILSVACFDIGEYVRHYP 401
>sp|O46563|VATH_BOVIN Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 348 bits (893), Expect = 2e-95 Identities = 178/406 (43%), Positives = 263/406 (64%), Gaps = 18/406 (4%) Frame = +2 Query: 68 LQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMFI 247 + A+AAE+R K+NW SYLQGQ IS + FI +++ + E + +++ AK FI Sbjct: 19 IAAKAAEVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQEMLQTEGSQRAKTFI 78 Query: 248 FLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFIA 427 L+ ++ EQT+QY+LT++DD LQE+ Q+V IF Y ++K++ F L R++ F Sbjct: 79 NLMTHISKEQTVQYILTLVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTV 138 Query: 428 YQASRIIAKIACWSSQLMETKDLQYFLRWIQDQF------------------RFPDNEYM 553 + +RIIAK+A W +LME DL Y+ WI+ Q ++Y+ Sbjct: 139 HMTARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVTAETGTVSSSDSSQYV 198 Query: 554 QTVARNLQMMLRIRQYRKVFVECSGVETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVI 733 Q VA LQ+MLR+ +YR +VE GV I+ L K Q+QYQ+IF +W L+F + Sbjct: 199 QCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSVWLLAFSPQ-MC 257 Query: 734 QIIKTPSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQ 913 + ++ ++I V+SDI++++ +EK+ R+ LA FR LEK + +E ALAM+QCK++KQ Sbjct: 258 EHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSVERETRQEYALAMIQCKVLKQ 317 Query: 914 LELLQQKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFW 1093 LE L+Q+ Y D ++++D+ +L EKL SV+D+SS +EY+ ELKSGRLEWSPVHK+EKFW Sbjct: 318 LENLEQQKYD-DEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFW 376 Query: 1094 RENADKFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 REN + +KN+ELLK+L +LL+ S DP VL VA HDVGE+V HYP Sbjct: 377 RENPARLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYP 422
>sp|Q20666|VATH1_CAEEL Probable vacuolar ATP synthase subunit H 1 (V-ATPase H subunit 1) (Vacuolar proton pump H subunit 1) (Vacuolar proton pump subunit SFD 1) Length = 451 Score = 248 bits (633), Expect = 3e-65 Identities = 132/392 (33%), Positives = 226/392 (57%), Gaps = 3/392 (0%) Frame = +2 Query: 65 YLQAQAAEIRLLKINWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMF 244 + Q +A ++R +K NW + + + I+ Y FI+ Y +A N R ++ A F Sbjct: 13 HFQKEADKVRAMKTNWGLFTRTRMIAQSDYDFIVTYQQAENEAERSTVLSVFKEKAVYAF 72 Query: 245 IFLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFI 424 + L+++++ + ++Y LT+IDDML+ED + IF K S F L R++++I Sbjct: 73 VHLMSQISKDDYVRYTLTLIDDMLREDVTRTIIFEDVAVLLKRSPFSFFMGLLHRQDQYI 132 Query: 425 AYQASRIIAKIACWSSQLMETKDLQYFLRWIQDQF-RFPDNEYMQTVARNLQMMLRIRQY 601 + I+ K+A + + + +L Y + +++ R +N+Y+ T R +Q + R Y Sbjct: 133 VHITFSILTKMAVFGNIKLSGDELDYCMGSLKEAMNRGTNNDYIVTAVRCMQTLFRFDPY 192 Query: 602 RKVFVECSGVETIVNALGG--KLNTQIQYQLIFCLWCLSFDADIVIQIIKTPSLISVVSD 775 R FV +G +++ +AL K QIQYQ+IFC+W L+F+ ++ + +LI +S Sbjct: 193 RVSFVNINGYDSLTHALYSTRKCGFQIQYQIIFCMWLLTFNGHAA-EVALSGNLIQTISG 251 Query: 776 IIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQLELLQQKDYSHDPE 955 I+ ++EK+IR+ ++ R L+ + ++ AL M+Q +I +L+ L+ + ++ D + Sbjct: 252 ILGNCQKEKVIRIVVSTLRNLITSNQDVYMKKQAALQMIQNRIPTKLDHLENRKFT-DVD 310 Query: 956 LTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWRENADKFLDKNFEL 1135 L +D+ YLQ +L V+ ++S +EY EL+ G L WSP HK E FW ENA + D EL Sbjct: 311 LVEDMVYLQTELKKVVQVLTSFDEYENELRQGSLHWSPAHKCEVFWNENAHRLNDNRQEL 370 Query: 1136 LKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 LK+LV +L+ S DP+VL VA HD+GEFV +YP Sbjct: 371 LKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYP 402
>sp|Q9LX65|VATH_ARATH Probable vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 441 Score = 149 bits (376), Expect = 2e-35 Identities = 103/400 (25%), Positives = 203/400 (50%), Gaps = 14/400 (3%) Frame = +2 Query: 71 QAQAAEIRLLK--INWSSYLQGQFISPDCYTFILKYDRAANSEARDAIIKESPHNAAKMF 244 QA+ + ++LK I W +Y+ + +S + +YD+ S AR ++ E +F Sbjct: 3 QAELSIEQVLKRDIPWETYMNTKLVSAKGLQLLRRYDKKPES-ARAQLLDEDGPAYVHLF 61 Query: 245 IFLLNKMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMENFFCFLRRENKFI 424 + +L + E+T++Y+L +I +ML + + +F +D+ E F L + N FI Sbjct: 62 VSILRDIFKEETVEYVLALIYEMLSANPTRARLFHDESLANEDTY-EPFLRLLWKGNWFI 120 Query: 425 AYQASRIIAKIACWSSQLMET-------KDLQYFLRWIQDQFRFPDNEY--MQTVARNLQ 577 ++ +I+A I + L+ + W+ Q + P + + L Sbjct: 121 QEKSCKILAWIISARPKAGNAVIGNGIDDVLKGLVEWLCAQLKQPSHPTRGVPIAISCLS 180 Query: 578 MMLRIRQYRKVFVECSGVETIVNALGG---KLNTQIQYQLIFCLWCLSFDADIVIQIIKT 748 +L+ R FV+ GV+ +V + + + Q+ Y+ C+W LS+ + I+ + T Sbjct: 181 SLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSY-YEPAIEYLAT 239 Query: 749 PSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQLELLQ 928 + ++++++ + +EK++RV + FR LL K + Q+ ++ L + + L+ Sbjct: 240 SRTMQRLTEVVKHSTKEKVVRVVILTFRNLLPKGTFGAQMVDLGLPHI-------IHSLK 292 Query: 929 QKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWRENAD 1108 + +S D +L D L L+E L ++ +SS ++Y E+ G L+W+P+HK FWREN Sbjct: 293 TQAWS-DEDLLDALNQLEEGLKDKIKKLSSFDKYKQEVLLGHLDWNPMHKETNFWRENVT 351 Query: 1109 KFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHY 1228 F + +F++L++L+ +L TS DP L VA D+ +F+ ++ Sbjct: 352 CFEENDFQILRVLLTILDTSSDPRSLAVACFDISQFIQYH 391
>sp|O14265|VATH_SCHPO Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase 54 kDa subunit) Length = 450 Score = 121 bits (303), Expect = 5e-27 Identities = 93/345 (26%), Positives = 170/345 (49%), Gaps = 21/345 (6%) Frame = +2 Query: 260 KMAMEQTIQYLLTMIDDMLQEDKQKVEIFRLYFAKTKDSMMEN----------FFCFLRR 409 K A E T Y + + +D V F L K D+++ + F+ FL + Sbjct: 68 KTAEEDTTAYSNLFLKLLSMKDTPDVVNFAL--VKLADTLLNSNKFLSAFGPAFYDFLEK 125 Query: 410 ENKFIAY---QASRIIAKIACW---SSQLMETKDLQYFLRWIQDQFRFPDNEYMQTVARN 571 + +I Y + + A++ SS K FL ++ + + + Sbjct: 126 DESYINYLDDDSKLLFARVFALCSSSSPCSVAKAFTLFLEYLGKLMQSLNPLTRLFAVQC 185 Query: 572 LQMMLRIRQYR-KVFVE--CSG--VETIVNALGGKLNTQIQYQLIFCLWCLSFDADIVIQ 736 L +L ++ +R ++ E CS E + N++G +TQ+QY +FC W L+F++ I Sbjct: 186 LNGVLTLKAHRYALWAENTCSFRLAELLRNSIG---DTQLQYYSLFCFWQLTFESHIAQD 242 Query: 737 IIKTPSLISVVSDIIRQTEREKIIRVSLALFRYLLEKLSNQNQVREVALAMVQCKIMKQL 916 I K LI ++ IIR + K+ R+ LA+ L++K ++ M+ + K + Sbjct: 243 INKRFDLIKLLVQIIRSDTKTKVYRLVLAILVNLIDKAP-----KDTISTMLLEHVDKAV 297 Query: 917 ELLQQKDYSHDPELTDDLAYLQEKLSSSVRDVSSMEEYTIELKSGRLEWSPVHKAEKFWR 1096 +LLQ++ ++ D ++T+ L ++ L S + +S+ + Y EL +G L WSP H++E FW Sbjct: 298 QLLQKRKWA-DEDITNYLDFITSTLDESSKHLSTFDMYKSELDTGILHWSPSHRSEDFWH 356 Query: 1097 ENADKFLDKNFELLKMLVELLKTSKDPIVLQVAIHDVGEFVSHYP 1231 +NA + + N+ LLK L +++ ++D L VA HD+G ++ YP Sbjct: 357 QNAKRLNEDNYALLKKLFHIVQYNEDNTSLAVACHDLGAYIRSYP 401
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,270,842
Number of Sequences: 369166
Number of extensions: 2634540
Number of successful extensions: 6686
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6652
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 14101537725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
