Planaria EST Database

DrC_00362

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00362
         (1222 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16237|HMDH_SCHMA  3-hydroxy-3-methylglutaryl-coenzyme A ...   272   1e-72
sp|O76819|HMDH_AGRIP  3-hydroxy-3-methylglutaryl-coenzyme A ...   240   7e-63
sp|Q12649|HMDH_PHYBL  3-hydroxy-3-methylglutaryl-coenzyme A ...   229   9e-60
sp|P14773|HMDH_DROME  3-hydroxy-3-methylglutaryl-coenzyme A ...   229   2e-59
sp|P34135|HMDH1_DICDI  3-hydroxy-3-methylglutaryl-coenzyme A...   227   6e-59
sp|P48021|HMDH_CAMAC  3-hydroxy-3-methylglutaryl-coenzyme A ...   227   6e-59
sp|P34136|HMDH2_DICDI  3-hydroxy-3-methylglutaryl-coenzyme A...   226   8e-59
sp|Q41438|HMD3_SOLTU  3-hydroxy-3-methylglutaryl-coenzyme A ...   226   1e-58
sp|P54960|HMDH_BLAGE  3-hydroxy-3-methylglutaryl-coenzyme A ...   224   3e-58
sp|O64966|HMDH1_GOSHI  3-hydroxy-3-methylglutaryl-coenzyme A...   223   9e-58

>sp|P16237|HMDH_SCHMA 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 948

 Score =  272 bits (696), Expect = 1e-72
 Identities = 148/300 (49%), Positives = 202/300 (67%), Gaps = 2/300 (0%)
 Frame = +1

Query: 7    AGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWIN-EDGFQLLKSHFDKTSRYGSLLSIN 183
            AGGI +V+Y D+MTR+PVV F SI   + C+ WI+ E+GFQ LKS FDKTS + +LLS+ 
Sbjct: 584  AGGIKSVVYRDQMTRAPVVWFPSIIDSVKCIAWIDSEEGFQTLKSAFDKTSAHVNLLSVF 643

Query: 184  PFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTA 363
              P+GR +H+RF+A TG+AMGMN++SK  D +L  LK+ F +M VISLSGNMC+DKK   
Sbjct: 644  ACPAGRYIHIRFAARTGDAMGMNMVSKATDSALHCLKKYFSNMQVISLSGNMCTDKKPAT 703

Query: 364  INWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAK-XXXXXXXXXXXXXXXXXXX 540
            IN ILGRGKSVIAE  L+ D++  +L T+A  L +L  +K                    
Sbjct: 704  INTILGRGKSVIAEAHLSADVLAQVLHTNAQRLARLTHSKNWIGSAMAGCPGMMGCNAHA 763

Query: 541  XXXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGT 720
                      TGQDLAQVV+SSSC+T++E      + +   L+ + TMPCLEVG +GGGT
Sbjct: 764  ANIIAGMFAATGQDLAQVVDSSSCLTQLEV-----DLSDDSLVASVTMPCLEVGTVGGGT 818

Query: 721  KLKAQKSCLSLLNLNEEKPCENFARIICATVLCSELNLMAALQTNDLVKSHLRLNRAQNN 900
            +L  Q++CL LL+L+ ++P E+ +RII  TVL +EL+LMAAL T+DLVK+H+  NRA+ +
Sbjct: 819  RLSGQRACLDLLDLSVDRPTEHLSRIIAGTVLAAELSLMAALDTDDLVKAHMHFNRAKQS 878

>sp|O76819|HMDH_AGRIP 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 833

 Score =  240 bits (612), Expect = 7e-63
 Identities = 137/302 (45%), Positives = 182/302 (60%), Gaps = 6/302 (1%)
 Frame = +1

Query: 13   GITTVIYGDKMTRSPVVQFNSIKRVLDCMNWI-NEDGFQLLKSHFDKTSRYGSLLSINPF 189
            G+T+V+    MTR+P ++  ++ R  +C  WI N+D + ++K  FD TSR+  L  I+  
Sbjct: 522  GVTSVVEDVGMTRAPAIKLPNVVRAHECRQWIDNKDNYAVIKEAFDSTSRFARLQEIHIG 581

Query: 190  PSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTAIN 369
              G  L+LRF A+TG+AMGMN++SKG + +L++LK  FPDM+VISLSGN CSDKK+ AIN
Sbjct: 582  VDGATLYLRFRATTGDAMGMNMVSKGAENALKLLKNYFPDMEVISLSGNYCSDKKAAAIN 641

Query: 370  WILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXXXX 549
            W+ GRGK V+ E  +T D +  I KTDA +L + C                         
Sbjct: 642  WVKGRGKRVVCETTITSDSLRTIFKTDAKTLAR-CNKIKNLSGSALAGSIGGNNAHAANM 700

Query: 550  XXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTKLK 729
                   TGQD AQ V SS+C T ME   +    N  DL +TCTMP LEVG +GGGT L 
Sbjct: 701  VTAIYIATGQDPAQNVTSSNCSTNMEVCGE----NGEDLYVTCTMPSLEVGTVGGGTILT 756

Query: 730  AQKSCLSLLNLN--EEKPCENFAR---IICATVLCSELNLMAALQTNDLVKSHLRLNRAQ 894
             Q +CL +L +     +P EN AR   +ICATVL  EL+LMAAL  +DLVKSH+R NR+ 
Sbjct: 757  GQGACLDILGVKGAGARPAENSARLASLICATVLAGELSLMAALVNSDLVKSHMRHNRST 816

Query: 895  NN 900
             N
Sbjct: 817  VN 818

>sp|Q12649|HMDH_PHYBL 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 1176

 Score =  229 bits (585), Expect = 9e-60
 Identities = 132/302 (43%), Positives = 180/302 (59%), Gaps = 6/302 (1%)
 Frame = +1

Query: 1    SAAGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWINEDGFQLLKSHFDKTSRYGSLLSI 180
            +A GG +T++  D MTR P V+F +I R   C  WI  +G  ++ + F+ TSR+  L  +
Sbjct: 856  NAGGGASTIVIADGMTRGPCVEFPTILRAAACKLWIENEGNDIVTNAFNSTSRFARLRKL 915

Query: 181  NPFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKST 360
                +G+ + +RFS +TG+AMGMN++SKG +++L ++ E+FPDM +ISLSGN C+DKK  
Sbjct: 916  KIALAGKLVFIRFSTTTGDAMGMNMISKGCEKALSIITEHFPDMQIISLSGNYCTDKKPA 975

Query: 361  AINWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXX 540
            AINWI GRGKSV+ E  +   IVE +LKT   +L +L I+K                   
Sbjct: 976  AINWIEGRGKSVVTEAVIPGAIVEKVLKTTVAALVELNISK-NLIGSAMAGSVGGFNAHA 1034

Query: 541  XXXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGT 720
                      TGQD AQ VESS+CIT M+A+   N+T   DL I+CTMP +EVG IGGGT
Sbjct: 1035 ANILTAIYLATGQDPAQNVESSNCITLMKAV---NDTK--DLHISCTMPSIEVGTIGGGT 1089

Query: 721  KLKAQKSCLSLLNLNEEKPCE------NFARIICATVLCSELNLMAALQTNDLVKSHLRL 882
             L  Q+S L +L +    P E        ARIICA V+  EL+L AAL    LVK+H+  
Sbjct: 1090 ILPPQQSMLDMLGVRGPHPTEPGKNAQRLARIICAAVMAGELSLCAALAAGHLVKAHMAH 1149

Query: 883  NR 888
            NR
Sbjct: 1150 NR 1151

>sp|P14773|HMDH_DROME 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 920

 Score =  229 bits (583), Expect = 2e-59
 Identities = 129/300 (43%), Positives = 182/300 (60%), Gaps = 7/300 (2%)
 Frame = +1

Query: 13   GITTVIYGDKMTRSPVVQFNSIKRVLDCMNWI-NEDGFQLLKSHFDKTSRYGSLLSINPF 189
            G+ +V+    MTR+P V+F S+ R  +  +WI N++ ++++K+ FD TSR+G L   +  
Sbjct: 604  GVRSVVEDVGMTRAPCVRFPSVARAAEAKSWIENDENYRVVKTEFDSTSRFGRLKDCHIA 663

Query: 190  PSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTAIN 369
              G +L++RF A TG+AMGMN++SKG + +LR ++  FPDM +ISLSGN C DKK  AIN
Sbjct: 664  MDGPQLYIRFVAITGDAMGMNMVSKGAEMALRRIQLQFPDMQIISLSGNFCCDKKPAAIN 723

Query: 370  WILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXXXX 549
            WI GRGK V+ EC ++   + ++LKTDA +L + C                         
Sbjct: 724  WIKGRGKRVVTECTISAATLRSVLKTDAKTLVE-CNKLKNMGGSAMAGSIGGNNAHAANM 782

Query: 550  XXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTKLK 729
                   TGQD AQ V SS+C T ME   +    N  DL +TCTMP LEVG +GGGT L 
Sbjct: 783  VTAVFLATGQDPAQNVTSSNCSTAMECWAE----NSEDLYMTCTMPSLEVGTVGGGTGLP 838

Query: 730  AQKSCLSLLNL---NEEKPCEN---FARIICATVLCSELNLMAALQTNDLVKSHLRLNRA 891
             Q +CL +L +   +  +P +N    A+I+CATV+  EL+LMAAL  +DLVKSH+R NR+
Sbjct: 839  GQSACLEMLGVRGAHATRPGDNAKKLAQIVCATVMAGELSLMAALVNSDLVKSHMRHNRS 898

>sp|P34135|HMDH1_DICDI 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase
            1)
          Length = 552

 Score =  227 bits (578), Expect = 6e-59
 Identities = 130/305 (42%), Positives = 184/305 (60%), Gaps = 7/305 (2%)
 Frame = +1

Query: 7    AGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWINE-DGFQLLKSHFDKTSRYGSLLSIN 183
            +GG    I    MTR+PVV+F+ I +  + ++WIN+ D +Q LK+ FD TSR+  L +I 
Sbjct: 254  SGGAKCTITSRGMTRAPVVRFSDIVKASEFVSWINDTDNYQALKAVFDSTSRFARLSAIK 313

Query: 184  PFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTA 363
               +GR +++RF   TG+AMGMN++SKGV+  L  LK  F DM ++S+SGNMC+DKK ++
Sbjct: 314  CTIAGRSVYIRFKCDTGDAMGMNMVSKGVEAVLEHLKIIFDDMTLLSISGNMCTDKKPSS 373

Query: 364  INWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXX 543
            INW  GRG+SV+ E  +T D+V+ +LKT+  +L  L IAK                    
Sbjct: 374  INWTEGRGRSVVCEAMITGDVVQRVLKTNVQALVDLNIAK-NLIGSAMAGSIGGFNAHAS 432

Query: 544  XXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTK 723
                     TGQD AQ VESS+CIT+MEA       +  DL IT TMP +EVG +GGGT 
Sbjct: 433  NIVTAIFLATGQDCAQNVESSNCITQMEAC-----NDGQDLYITVTMPSIEVGTVGGGTS 487

Query: 724  LKAQKSCLSLLNL---NEEKP---CENFARIICATVLCSELNLMAALQTNDLVKSHLRLN 885
            L AQ +CL ++ +   +  KP    +  A+ I + V+  EL+LM+AL    L+KSHL+ N
Sbjct: 488  LPAQSACLDIIGVKGSSSSKPGANADQLAKTIASAVMAGELSLMSALSAGHLMKSHLQYN 547

Query: 886  RAQNN 900
            RA+ N
Sbjct: 548  RAKTN 552

>sp|P48021|HMDH_CAMAC 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 593

 Score =  227 bits (578), Expect = 6e-59
 Identities = 132/306 (43%), Positives = 187/306 (61%), Gaps = 7/306 (2%)
 Frame = +1

Query: 4    AAGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWI-NEDGFQLLKSHFDKTSRYGSLLSI 180
            A GG T+V+  D MTR+PVV+F S KR  D   ++ N   F+ L + F+ +SR+G L +I
Sbjct: 288  ACGGATSVLLRDAMTRAPVVRFGSAKRAADLKFFLENPLNFETLAAVFNSSSRFGKLQNI 347

Query: 181  NPFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKST 360
                +G+ L++R+S STG+AMGMN++SKGV   L  L+++FPDMDVI +SGN CSDKK  
Sbjct: 348  KCAIAGKNLYMRYSCSTGDAMGMNMISKGVQNVLDFLQDDFPDMDVIGISGNYCSDKKPA 407

Query: 361  AINWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXX 540
            A+NWI GRGKSV+ E  +  ++V+ +LKT+  SL +L + K                   
Sbjct: 408  AVNWIEGRGKSVVCEAVIKEEVVKKVLKTNVASLVELNMLK-NLTGSAMAGALGGFNAHA 466

Query: 541  XXXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGT 720
                      TGQD AQ VESS CIT MEA+    N  K DL ++ TMP +EVG +GGGT
Sbjct: 467  SNIVSAVYLATGQDPAQNVESSHCITMMEAI----NDGK-DLHVSVTMPSIEVGTVGGGT 521

Query: 721  KLKAQKSCLSLLNL---NEEKPCEN---FARIICATVLCSELNLMAALQTNDLVKSHLRL 882
            +L +Q +CL+LL +   ++E P  N    A I+  +VL  EL+LM+A+    LV SH++ 
Sbjct: 522  QLASQSACLNLLGVKGASKEAPGSNARLLATIVAGSVLAGELSLMSAIAAGQLVNSHMKY 581

Query: 883  NRAQNN 900
            NR+  +
Sbjct: 582  NRSNKD 587

>sp|P34136|HMDH2_DICDI 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (HMG-CoA reductase
            2)
          Length = 481

 Score =  226 bits (577), Expect = 8e-59
 Identities = 136/301 (45%), Positives = 186/301 (61%), Gaps = 7/301 (2%)
 Frame = +1

Query: 7    AGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWI-NEDGFQLLKSHFDKTSRYGSLLSIN 183
            +GG  TV+    MTR+PV +  S  R  +   WI N++ F  + S F+ TSR+  L SI 
Sbjct: 165  SGGAKTVLLQSGMTRAPVCRLPSSIRAGELKQWIENQENFYQVASAFNSTSRFARLKSIK 224

Query: 184  PFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTA 363
               +GR ++LRF +STG+AMGMN++SKGV+++L V+ E FP+M+V+SLSGN+C+DKK ++
Sbjct: 225  VVIAGRLVYLRFKSSTGDAMGMNMVSKGVEKALEVITEYFPEMEVLSLSGNVCTDKKPSS 284

Query: 364  INWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXX 543
            INW+ GRGKSV+AE  ++ DIV ++LKT   +L  L I K                    
Sbjct: 285  INWLEGRGKSVVAEAVISGDIVRDVLKTTVEALVSLNIDK-NLIGSAMAGSIGGFNAHAS 343

Query: 544  XXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTK 723
                     TGQD AQ VESS+CIT ME++    N  K DL I+ TMP +EVG +GGGT 
Sbjct: 344  NIVTALYIATGQDPAQNVESSNCITLMESI----NGGK-DLYISVTMPSIEVGTVGGGTH 398

Query: 724  LKAQKSCLSLLNL---NEEKP---CENFARIICATVLCSELNLMAALQTNDLVKSHLRLN 885
            L AQ +CL LL +   N E+P    E  AR++ A VL  EL+LM+AL    LV+SHL+ N
Sbjct: 399  LPAQSACLDLLKIRGANLERPGANSEQLARVVAAAVLSGELSLMSALAAGHLVRSHLKHN 458

Query: 886  R 888
            R
Sbjct: 459  R 459

>sp|Q41438|HMD3_SOLTU 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 (HMG-CoA reductase
            3) (HMG3.3)
          Length = 574

 Score =  226 bits (576), Expect = 1e-58
 Identities = 130/302 (43%), Positives = 184/302 (60%), Gaps = 7/302 (2%)
 Frame = +1

Query: 7    AGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWINED-GFQLLKSHFDKTSRYGSLLSIN 183
            +GG T+V++ D MTR+PVV+F S KR  +   ++ +   F+ L   F+K+SR+  L +I 
Sbjct: 273  SGGATSVLFRDAMTRAPVVRFGSAKRAAELKFFVEDPMNFETLSVVFNKSSRFARLQNIQ 332

Query: 184  PFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTA 363
               +G+ L++RFS STG+AMGMN++SKGV   L  L+  +PDMD+I +SGN CSDKK  A
Sbjct: 333  CAIAGKNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDIIGISGNYCSDKKPAA 392

Query: 364  INWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXX 543
            +NWI GRGKSV+ E  +  D+V+ +LKT+  +L +L + K                    
Sbjct: 393  VNWIEGRGKSVVCEAIIKEDVVKKVLKTEVATLVELNMLK-NLTGSAMAGALGGFNAHAS 451

Query: 544  XXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTK 723
                     TGQD AQ +ESS CIT MEA+    N  K DL I+ TMP +EVG +GGGT+
Sbjct: 452  NIVSAVYLATGQDPAQNIESSHCITMMEAV----NDGK-DLHISVTMPSIEVGTVGGGTQ 506

Query: 724  LKAQKSCLSLLNL---NEEKPCEN---FARIICATVLCSELNLMAALQTNDLVKSHLRLN 885
            L +Q +CL+LL +   N E P  N    A I+  +VL  EL+LM+A+    LVKSH++ N
Sbjct: 507  LASQSACLNLLGVKGANREAPGSNARLLATIVAGSVLAGELSLMSAISAGQLVKSHMKYN 566

Query: 886  RA 891
            R+
Sbjct: 567  RS 568

>sp|P54960|HMDH_BLAGE 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)
          Length = 856

 Score =  224 bits (572), Expect = 3e-58
 Identities = 130/300 (43%), Positives = 180/300 (60%), Gaps = 7/300 (2%)
 Frame = +1

Query: 13   GITTVIYGDKMTRSPVVQFNSIKRVLDCMNWINED-GFQLLKSHFDKTSRYGSLLSINPF 189
            G+T+ I  D MTR PVV+F +I R  + M W+     F+ +K +FD TSR+  L  I+  
Sbjct: 546  GVTSRIVADGMTRGPVVRFPNIDRASEAMLWMQVPYNFEQIKKNFDSTSRFARLSKIHIR 605

Query: 190  PSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTAIN 369
             +GR L +RF A+TG+AMGMN+LSKG + +L  +++ +PDM+++SLSGN C+DKK  A+N
Sbjct: 606  VAGRHLFIRFIATTGDAMGMNMLSKGTEVALAYVQQVYPDMEILSLSGNFCTDKKPAAVN 665

Query: 370  WILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXXXX 549
            WI GRGKSV+ E  +  DI++++LKT   +L  + I K                      
Sbjct: 666  WIEGRGKSVVCEAIVPADIIKSVLKTSVQALMDVNITK-NLIGSAVAGSIGGFNAHAANI 724

Query: 550  XXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTKLK 729
                   TGQD AQ V SS+C+T ME   +       DL ++CTMP +E+G IGGGT L 
Sbjct: 725  VTAIFIATGQDPAQNVGSSNCMTLMEPWGEDGK----DLYVSCTMPSIEIGTIGGGTVLP 780

Query: 730  AQKSCLSLLNL---NEEKPCEN---FARIICATVLCSELNLMAALQTNDLVKSHLRLNRA 891
             Q +CL +L +   NE  P EN    ARI+C TVL  EL+LM+AL    LVKSH+R NR+
Sbjct: 781  PQAACLDMLGVRGANEMCPGENANTLARIVCGTVLAGELSLMSALAAGHLVKSHMRHNRS 840

>sp|O64966|HMDH1_GOSHI 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase
            1)
          Length = 585

 Score =  223 bits (568), Expect = 9e-58
 Identities = 133/305 (43%), Positives = 183/305 (60%), Gaps = 7/305 (2%)
 Frame = +1

Query: 7    AGGITTVIYGDKMTRSPVVQFNSIKRVLDCMNWINE-DGFQLLKSHFDKTSRYGSLLSIN 183
            +GG T+V+  D MTR+PVV+F + KR  D   ++ + + F+ L   F+++SR+  L SI 
Sbjct: 281  SGGATSVLLRDGMTRAPVVRFGTAKRAADLKLYLEDPENFETLACVFNRSSRFARLQSIK 340

Query: 184  PFPSGRKLHLRFSASTGNAMGMNILSKGVDESLRVLKENFPDMDVISLSGNMCSDKKSTA 363
               +G+ L+LRFS  TG+AMGMN++SKGV   L  L+ +FPDMDVI +SGN CSDKK  A
Sbjct: 341  CAIAGKNLYLRFSCFTGDAMGMNMVSKGVQNVLDFLQTDFPDMDVIGISGNFCSDKKPAA 400

Query: 364  INWILGRGKSVIAECQLTHDIVENILKTDAVSLEKLCIAKXXXXXXXXXXXXXXXXXXXX 543
            +NWI GRGKSV+ E  +  D+V  +LKT   SL +L + K                    
Sbjct: 401  VNWIEGRGKSVVCEAIINGDVVTKVLKTSVESLVELNMLK-NLTGSAMAGALGGFNAHAS 459

Query: 544  XXXXXXXXXTGQDLAQVVESSSCITEMEALPQKNNTNKFDLLITCTMPCLEVGVIGGGTK 723
                     TGQD AQ VESS CIT MEA+    N  K DL ++ TMP +EVG +GGGT+
Sbjct: 460  NIVTAVYIATGQDPAQNVESSHCITMMEAV----NGGK-DLHVSVTMPSIEVGTVGGGTQ 514

Query: 724  LKAQKSCLSLLNL---NEEKPCEN---FARIICATVLCSELNLMAALQTNDLVKSHLRLN 885
            L +Q +CL+LL +   ++E P  N    A I+   VL  EL+LM+AL    LVKSH++ N
Sbjct: 515  LASQSACLNLLGVKGASKESPGANSILLATIVAGAVLAGELSLMSALAAGQLVKSHMKYN 574

Query: 886  RAQNN 900
            R+  +
Sbjct: 575  RSSKD 579

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,216,726
Number of Sequences: 369166
Number of extensions: 2390131
Number of successful extensions: 5570
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5428
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13911618025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00362

  1. Dr_sW_009_J10
  2. Dr_sW_026_N12
  3. Dr_sW_001_B07
  4. Dr_sW_027_C16