Planaria EST Database

DrC_00339

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00339
         (1521 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9GR88|ERF1_POLMI  Eukaryotic peptide chain release facto...   626   e-179
sp|P35615|ERF1_XENLA  Eukaryotic peptide chain release facto...   623   e-178
sp|P62498|ERF1_XENTR  Eukaryotic peptide chain release facto...   622   e-178
sp|Q8BWY3|ERF1_MOUSE  Eukaryotic peptide chain release facto...   618   e-176
sp|Q5R4C7|ERF1_PONPY  Eukaryotic peptide chain release facto...   615   e-175
sp|Q9VPH7|ERF1_DROME  Eukaryotic peptide chain release facto...   615   e-175
sp|O59948|ERF1_PODAN  Eukaryotic peptide chain release facto...   592   e-168
sp|O16520|ERF1_CAEEL  Eukaryotic peptide chain release facto...   583   e-166
sp|Q5CG95|ERF1_CRYHO  Eukaryotic peptide chain release facto...   566   e-161
sp|P35614|ERF1Z_ARATH  Eukaryotic peptide chain release fact...   561   e-159

>sp|Q9GR88|ERF1_POLMI Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 435

 Score =  626 bits (1615), Expect = e-179
 Identities = 308/429 (71%), Positives = 363/429 (84%)
 Frame = +2

Query: 2    DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
            + ++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQ++RVAKMLADE+GTASNIKS
Sbjct: 5    ETTADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKS 64

Query: 182  RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
            R NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+TD+GKEKKV+IDFEPF+P+NTSL
Sbjct: 65   RVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSL 124

Query: 362  YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
            YLCDNKFHTEAL+ALL D++KFGFI++DGNGALFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 125  YLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGG 184

Query: 542  QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
            QSALRFARLR+EKRHNYVRKVAETAVQ+FITND+ NV G+VLAGSADFK EL +SDMFD 
Sbjct: 185  QSALRFARLRMEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSDMFDQ 244

Query: 722  RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFG 901
            RL  K+LK VDVSYGGE GFNQAIELSA+ L+NVKFIQE+KLI R+FDEI Q+TG++CFG
Sbjct: 245  RLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFG 304

Query: 902  VEDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNI 1081
            V+DT++ LEMGAVE LIVWENL   RY L+N++T E   L L+P+Q+K++ HF DK T +
Sbjct: 305  VDDTLKALEMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQEKDKTHFTDKDTGV 364

Query: 1082 XXXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDMGN 1261
                             YK +G+ LEIV+D+S EGSQFVKGFGGIGG+LRY++DFQ M  
Sbjct: 365  EMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQGME- 423

Query: 1262 DILNDQEED 1288
               ND + D
Sbjct: 424  --FNDDDPD 430

>sp|P35615|ERF1_XENLA Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1) (Omnipotent suppressor protein 1
            homolog) (SUP1 homolog)
          Length = 437

 Score =  623 bits (1606), Expect = e-178
 Identities = 312/432 (72%), Positives = 365/432 (84%), Gaps = 2/432 (0%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            +++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6    SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66   VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126  LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186  SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+TG++CFGV
Sbjct: 246  LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGV 305

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
            EDT++ LEMGAVE LIV+ENL   RY LR N + E   L L PEQ+K+++HF+DK T   
Sbjct: 306  EDTLKALEMGAVEILIVYENLDTMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQE 365

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDMGND 1264
                            YK +GA LEIV+DKS EGSQFVKGFGGIGGILRY+VDFQ M   
Sbjct: 366  HELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMDYQ 425

Query: 1265 ILNDQ--EEDDF 1294
             ++D+  + DD+
Sbjct: 426  GVDDEFFDLDDY 437

>sp|P62498|ERF1_XENTR Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 437

 Score =  622 bits (1605), Expect = e-178
 Identities = 309/417 (74%), Positives = 358/417 (85%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            +++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6    SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66   VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126  LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186  SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+TG++CFGV
Sbjct: 246  LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGV 305

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
            EDT++ LEMGAVE LIV+ENL + RY LR N + E   L L PEQ+K+++HF+DK T   
Sbjct: 306  EDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQE 365

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDM 1255
                            YK +GA LEIV+DKS EGSQFVKGFGGIGGILRY+VDFQ M
Sbjct: 366  HELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422

>sp|Q8BWY3|ERF1_MOUSE Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
 sp|P62497|ERF1_RABIT Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
 sp|P62496|ERF1_MESAU Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1) (Cl1 protein)
 sp|P62495|ERF1_HUMAN Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1) (TB3-1) (Cl1 protein)
 sp|Q5U2Q7|ERF1_RAT Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 437

 Score =  618 bits (1593), Expect = e-176
 Identities = 308/417 (73%), Positives = 355/417 (85%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            +++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6    SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66   VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126  LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186  SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+TG++CFGV
Sbjct: 246  LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGV 305

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
            EDT++ LEMGAVE LIV+ENL + RY L    T E   L L PEQ+K+++HF DK T   
Sbjct: 306  EDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQE 365

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDM 1255
                            YK +GA LEIV+DKS EGSQFVKGFGGIGGILRY+VDFQ M
Sbjct: 366  HELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422

>sp|Q5R4C7|ERF1_PONPY Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 437

 Score =  615 bits (1586), Expect = e-175
 Identities = 307/417 (73%), Positives = 354/417 (84%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            +++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6    SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66   VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126  LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186  SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+F EI Q+TG++CFGV
Sbjct: 246  LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFGEISQDTGKYCFGV 305

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
            EDT++ LEMGAVE LIV+ENL + RY L    T E   L L PEQ+K+++HF DK T   
Sbjct: 306  EDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQE 365

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDM 1255
                            YK +GA LEIV+DKS EGSQFVKGFGGIGGILRY+VDFQ M
Sbjct: 366  HELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422

>sp|Q9VPH7|ERF1_DROME Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 438

 Score =  615 bits (1586), Expect = e-175
 Identities = 304/430 (70%), Positives = 362/430 (84%), Gaps = 1/430 (0%)
 Frame = +2

Query: 2    DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
            + S+D NVE+WKIKKLI SLE ARGNGTSMISLII P DQI+RV+KMLADE+GTASNIKS
Sbjct: 5    ETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKS 64

Query: 182  RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
            R NRLSVL AITS Q +LKLY +VP NGLV+YCGTI+T++GKEKKV+IDFEPF+P+NTSL
Sbjct: 65   RVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSL 124

Query: 362  YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
            YLCDNKFHTEAL+ALL D++KFGFI++DGNGALFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 125  YLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGG 184

Query: 542  QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
            QSALRFARLR+EKRHNYVRKVAE A Q+FITNDK N+ G++LAGSADFK EL +SDMFD 
Sbjct: 185  QSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDP 244

Query: 722  RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFG 901
            RL +KV+K VDVSYGGE GFNQAIEL+A+SL NVKFIQE+KLI R+FDEI Q+TG++CFG
Sbjct: 245  RLQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFG 304

Query: 902  VEDTVRGLEMGAVETLIVWENLAVCRYTLRNN-STAETTELILRPEQKKERAHFLDKTTN 1078
            VEDT+R LE+G+VETLI WENL + RY L+N+ ++  TT L L PEQ+K+++HF DK + 
Sbjct: 305  VEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESG 364

Query: 1079 IXXXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDMG 1258
            +                 YK +GA LEI++DKS EGSQFV+GFGGIGGILRYKVDFQ M 
Sbjct: 365  VEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQ 424

Query: 1259 NDILNDQEED 1288
             D L++   D
Sbjct: 425  LDELDNDGFD 434

>sp|O59948|ERF1_PODAN Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 435

 Score =  592 bits (1525), Expect = e-168
 Identities = 297/429 (69%), Positives = 351/429 (81%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            N ++ N+E+WK+KKLI  LEAARGNGTSMISLII P DQI+R AKMLA+EYGTASNIKSR
Sbjct: 7    NEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSR 66

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NR SVLSAITSTQQ+LKLYN+VP NGLVVYCG I+T +GKE+KV+IDFEPF+P+NTSLY
Sbjct: 67   VNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPINTSLY 126

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFHTEAL+ LLE + KFGFI++DGNGALFGTL+GNTRDI+HKFSVDLPKKHGRGGQ
Sbjct: 127  LCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNTRDIVHKFSVDLPKKHGRGGQ 186

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR EKRHNYVRKVAE AVQ FITNDKVNV GIVLAGSADFKN+L+ SDMFD R
Sbjct: 187  SALRFARLREEKRHNYVRKVAELAVQNFITNDKVNVMGIVLAGSADFKNDLNASDMFDQR 246

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L  KV+K VDVSYGGE GFNQAIEL++++L NVKFIQE+KLI ++F+EI Q+TGR C+GV
Sbjct: 247  LATKVIKVVDVSYGGENGFNQAIELASETLGNVKFIQEKKLIGKYFEEISQDTGRICYGV 306

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
            EDT++ LE+GAVETLIV+ENL V R+ L++++ AE      + +    R  F+DK T   
Sbjct: 307  EDTLKALELGAVETLIVFENLEVTRWVLKDSNGAEIIIHSTKQQDAANRDRFMDKETGQE 366

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDMGND 1264
                            YKD+G  LE VSD+S EG+QFVKGFGGIGGILRYKV+F+     
Sbjct: 367  MEVVSQESFLEWIAEHYKDFGTTLEFVSDRSTEGNQFVKGFGGIGGILRYKVNFEQ---- 422

Query: 1265 ILNDQEEDD 1291
             LN+ ++DD
Sbjct: 423  -LNEVDDDD 430

>sp|O16520|ERF1_CAEEL Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 443

 Score =  583 bits (1502), Expect = e-166
 Identities = 290/432 (67%), Positives = 352/432 (81%), Gaps = 1/432 (0%)
 Frame = +2

Query: 2    DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
            D+++D NVEMWKIK+LI SLE ARGNGTSMISLII P DQ+ R+ +MLA+EYGTASNIKS
Sbjct: 13   DDAADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKS 72

Query: 182  RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
            R NRLSVL AITS Q +LKLYN+VP NGLVVYCGTIMTD+GKEKKV+IDFEPF+ +NTSL
Sbjct: 73   RVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSL 132

Query: 362  YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
            YLCDNKFHTEAL  LL D++KFGFII+DGNG LFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 133  YLCDNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPKKHGRGG 192

Query: 542  QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
            QSA+RFARLR EKRHNYVRKVAE +V+ FI NDKV V G++LAGSADFK EL +SDMFD 
Sbjct: 193  QSAVRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQ 252

Query: 722  RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFG 901
            RL AK++K VD++YGGE GFNQAIEL+AD+LA+VKFIQE+KLI  +FDEI Q+TG++ FG
Sbjct: 253  RLQAKMIKTVDIAYGGENGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDTGKYVFG 312

Query: 902  VEDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNI 1081
            V+DT+  LEMGA+ETLI WENL + RY ++ NS  E   L LRP+++K+++HF D  T  
Sbjct: 313  VKDTLAALEMGAIETLICWENLDIVRYKMK-NSLGEDILLNLRPDEEKDKSHFTDSETGQ 371

Query: 1082 XXXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDMG- 1258
                             YK++GA LEIV+DKS EG+QFV+GFGGIGG+LRY+VD   +  
Sbjct: 372  DMEIIETMPLLEWFANNYKNFGAALEIVTDKSQEGAQFVRGFGGIGGLLRYRVDLAHVDL 431

Query: 1259 NDILNDQEEDDF 1294
             D L++ + DD+
Sbjct: 432  EDELDNIDLDDY 443

>sp|Q5CG95|ERF1_CRYHO Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic
            release factor 1)
          Length = 429

 Score =  566 bits (1459), Expect = e-161
 Identities = 274/416 (65%), Positives = 340/416 (81%)
 Frame = +2

Query: 5    NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
            + +D NV+ WK+++LI +LEAARGNGTSMISL+IKP D+I+R++KMLADEYGTASNIKSR
Sbjct: 2    SDNDTNVKQWKVRRLIATLEAARGNGTSMISLVIKPKDEISRISKMLADEYGTASNIKSR 61

Query: 185  TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
             NRLSVLSAITSTQQ+LKLYNR P NGLVVYCGT++T+DGKEKKV+IDFEPF+P+NTSLY
Sbjct: 62   VNRLSVLSAITSTQQRLKLYNRTPQNGLVVYCGTLITEDGKEKKVNIDFEPFKPINTSLY 121

Query: 365  LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
            LCDNKFH +AL  LLE + KFGFIIVDGNGAL+G + G++R++L +F+VDLPKKHGRGGQ
Sbjct: 122  LCDNKFHVDALKELLETDDKFGFIIVDGNGALYGVVQGSSREVLLRFNVDLPKKHGRGGQ 181

Query: 545  SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
            SALRFARLR+EKRHNY+RKVAETA  MFITND+VNV  ++LAGSADFKNEL +SD+FD R
Sbjct: 182  SALRFARLRMEKRHNYLRKVAETATTMFITNDQVNVAALILAGSADFKNELAQSDIFDQR 241

Query: 725  LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFCFGV 904
            L +K+LK VDVSYGG+ GFNQAIELS+D+L NVKF+QE+KLI +FFDE+ Q+TG++ +G+
Sbjct: 242  LASKILKIVDVSYGGDNGFNQAIELSSDALQNVKFVQEKKLITKFFDEVAQDTGKYVYGI 301

Query: 905  EDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTTNIX 1084
             +T++ LEMGA+E LIVWENL   R  ++N ST E    +  P ++ + + F D  T   
Sbjct: 302  NETLQALEMGAIELLIVWENLETKRMVVKNPSTGEEKVFLNSPTEQHDESKFKDPETGAE 361

Query: 1085 XXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQD 1252
                            Y++YGA LE V++KS EG+QF KGFGG GGILRYKVDFQD
Sbjct: 362  LDVIEILPLTEWLVNTYQNYGAQLEFVTNKSQEGNQFQKGFGGFGGILRYKVDFQD 417

>sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3 (eRF1-3)
            (Eukaryotic release factor 1-3) (Omnipotent suppressor
            protein 1 homolog 3) (SUP1 homolog 3)
          Length = 435

 Score =  561 bits (1445), Expect = e-159
 Identities = 282/429 (65%), Positives = 339/429 (79%), Gaps = 2/429 (0%)
 Frame = +2

Query: 2    DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
            D  SD N+E+WKIKKLI  LE ARGNGTSMISLI+ P DQ+ RV KMLADEYGTASNIKS
Sbjct: 3    DQESDKNIEIWKIKKLIKGLETARGNGTSMISLIMPPRDQVARVTKMLADEYGTASNIKS 62

Query: 182  RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
            R NR SVLSAITS QQ+LKLYN+VP NGLV+Y GTI+TDDGKEKKV+IDFEPF+P+N SL
Sbjct: 63   RVNRQSVLSAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASL 122

Query: 362  YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
            YLCDNKFHTE L+ LLE + KFGFI++DGNG LFGTL+GNTR++LHKF+VDLPKKHGRGG
Sbjct: 123  YLCDNKFHTEPLNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGG 182

Query: 542  QSALRFARLRVEKRHNYVRKVAETAVQMFI--TNDKVNVEGIVLAGSADFKNELHESDMF 715
            QSALRFARLR+EKRHNYVRK AE A Q +I     + NV G++LAGSADFK EL +S++F
Sbjct: 183  QSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELF 242

Query: 716  DLRLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNTGRFC 895
            D RL AK+L  VDVSYGGE GFNQAIELSA+ L+NVKFIQE+KLI ++F+EI Q+TG++ 
Sbjct: 243  DPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYV 302

Query: 896  FGVEDTVRGLEMGAVETLIVWENLAVCRYTLRNNSTAETTELILRPEQKKERAHFLDKTT 1075
            FGVEDT++ LEMGAVETLIVWENL + RY L+NN+T E     L  +Q+  +++F D  T
Sbjct: 303  FGVEDTLKALEMGAVETLIVWENLDINRYELKNNTTGEIVIKHLGKDQENNQSNFHDAET 362

Query: 1076 NIXXXXXXXXXXXXXXXXKYKDYGAILEIVSDKSAEGSQFVKGFGGIGGILRYKVDFQDM 1255
            N                 +YK +G  LE V++KS EGSQF +GFGGIGG+LRY++D +  
Sbjct: 363  NAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDMRTF 422

Query: 1256 GNDILNDQE 1282
              D L+D E
Sbjct: 423  --DELSDGE 429

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,419,018
Number of Sequences: 369166
Number of extensions: 2940836
Number of successful extensions: 7703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7623
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18420187905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00339

  1. Dr_sW_009_A07
  2. Dr_sW_013_E10
  3. Dr_sW_014_O16