Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_A07
(883 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GR88|ERF1_POLMI Eukaryotic peptide chain release facto... 485 e-137
sp|P35615|ERF1_XENLA Eukaryotic peptide chain release facto... 482 e-136
sp|Q8BWY3|ERF1_MOUSE Eukaryotic peptide chain release facto... 482 e-136
sp|P62498|ERF1_XENTR Eukaryotic peptide chain release facto... 482 e-136
sp|Q5R4C7|ERF1_PONPY Eukaryotic peptide chain release facto... 479 e-135
sp|Q9VPH7|ERF1_DROME Eukaryotic peptide chain release facto... 474 e-133
sp|O59948|ERF1_PODAN Eukaryotic peptide chain release facto... 472 e-133
sp|O16520|ERF1_CAEEL Eukaryotic peptide chain release facto... 460 e-129
sp|Q5CG95|ERF1_CRYHO Eukaryotic peptide chain release facto... 458 e-129
sp|Q39097|ERFA_ARATH Eukaryotic peptide chain release facto... 449 e-126
>sp|Q9GR88|ERF1_POLMI Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 435
Score = 485 bits (1248), Expect = e-137
Identities = 238/294 (80%), Positives = 271/294 (92%)
Frame = +2
Query: 2 DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
+ ++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQ++RVAKMLADE+GTASNIKS
Sbjct: 5 ETTADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKS 64
Query: 182 RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
R NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+TD+GKEKKV+IDFEPF+P+NTSL
Sbjct: 65 RVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSL 124
Query: 362 YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
YLCDNKFHTEAL+ALL D++KFGFI++DGNGALFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 125 YLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGG 184
Query: 542 QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
QSALRFARLR+EKRHNYVRKVAETAVQ+FITND+ NV G+VLAGSADFK EL +SDMFD
Sbjct: 185 QSALRFARLRMEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSDMFDQ 244
Query: 722 RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
RL K+LK VDVSYGGE GFNQAIELSA+ L+NVKFIQE+KLI R+FDEI Q+T
Sbjct: 245 RLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDT 298
>sp|P35615|ERF1_XENLA Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1) (Omnipotent suppressor
protein 1 homolog) (SUP1 homolog)
Length = 437
Score = 482 bits (1240), Expect = e-136
Identities = 237/293 (80%), Positives = 271/293 (92%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
+++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6 SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66 VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126 LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186 SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+T
Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDT 298
>sp|Q8BWY3|ERF1_MOUSE Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
sp|P62497|ERF1_RABIT Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
sp|P62496|ERF1_MESAU Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1) (Cl1 protein)
sp|P62495|ERF1_HUMAN Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1) (TB3-1) (Cl1 protein)
sp|Q5U2Q7|ERF1_RAT Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 437
Score = 482 bits (1240), Expect = e-136
Identities = 237/293 (80%), Positives = 271/293 (92%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
+++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6 SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66 VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126 LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186 SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+T
Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDT 298
>sp|P62498|ERF1_XENTR Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 437
Score = 482 bits (1240), Expect = e-136
Identities = 237/293 (80%), Positives = 271/293 (92%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
+++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6 SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66 VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126 LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186 SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+FDEI Q+T
Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDT 298
>sp|Q5R4C7|ERF1_PONPY Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 437
Score = 479 bits (1233), Expect = e-135
Identities = 236/293 (80%), Positives = 270/293 (92%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
+++D NVE+WKIKKLI SLEAARGNGTSMISLII P DQI+RVAKMLADE+GTASNIKSR
Sbjct: 6 SAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSR 65
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NRLSVL AITS QQ+LKLYN+VP NGLVVYCGTI+T++GKEKKV+IDFEPF+P+NTSLY
Sbjct: 66 VNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLY 125
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ALL D+SKFGFI++DG+GALFGTL GNTR++LHKF+VDLPKKHGRGGQ
Sbjct: 126 LCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQ 185
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR+EKRHNYVRKVAETAVQ+FI+ DKVNV G+VLAGSADFK EL +SDMFD R
Sbjct: 186 SALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQR 245
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L +KVLK VD+SYGGE GFNQAIELS + L+NVKFIQE+KLI R+F EI Q+T
Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFGEISQDT 298
>sp|Q9VPH7|ERF1_DROME Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 438
Score = 474 bits (1219), Expect = e-133
Identities = 231/294 (78%), Positives = 267/294 (90%)
Frame = +2
Query: 2 DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
+ S+D NVE+WKIKKLI SLE ARGNGTSMISLII P DQI+RV+KMLADE+GTASNIKS
Sbjct: 5 ETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKS 64
Query: 182 RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
R NRLSVL AITS Q +LKLY +VP NGLV+YCGTI+T++GKEKKV+IDFEPF+P+NTSL
Sbjct: 65 RVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSL 124
Query: 362 YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
YLCDNKFHTEAL+ALL D++KFGFI++DGNGALFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 125 YLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGG 184
Query: 542 QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
QSALRFARLR+EKRHNYVRKVAE A Q+FITNDK N+ G++LAGSADFK EL +SDMFD
Sbjct: 185 QSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDP 244
Query: 722 RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
RL +KV+K VDVSYGGE GFNQAIEL+A+SL NVKFIQE+KLI R+FDEI Q+T
Sbjct: 245 RLQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDT 298
>sp|O59948|ERF1_PODAN Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 435
Score = 472 bits (1214), Expect = e-133
Identities = 232/293 (79%), Positives = 265/293 (90%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
N ++ N+E+WK+KKLI LEAARGNGTSMISLII P DQI+R AKMLA+EYGTASNIKSR
Sbjct: 7 NEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSR 66
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NR SVLSAITSTQQ+LKLYN+VP NGLVVYCG I+T +GKE+KV+IDFEPF+P+NTSLY
Sbjct: 67 VNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPINTSLY 126
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ LLE + KFGFI++DGNGALFGTL+GNTRDI+HKFSVDLPKKHGRGGQ
Sbjct: 127 LCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNTRDIVHKFSVDLPKKHGRGGQ 186
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR EKRHNYVRKVAE AVQ FITNDKVNV GIVLAGSADFKN+L+ SDMFD R
Sbjct: 187 SALRFARLREEKRHNYVRKVAELAVQNFITNDKVNVMGIVLAGSADFKNDLNASDMFDQR 246
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L KV+K VDVSYGGE GFNQAIEL++++L NVKFIQE+KLI ++F+EI Q+T
Sbjct: 247 LATKVIKVVDVSYGGENGFNQAIELASETLGNVKFIQEKKLIGKYFEEISQDT 299
>sp|O16520|ERF1_CAEEL Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 443
Score = 460 bits (1184), Expect = e-129
Identities = 225/294 (76%), Positives = 261/294 (88%)
Frame = +2
Query: 2 DNSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKS 181
D+++D NVEMWKIK+LI SLE ARGNGTSMISLII P DQ+ R+ +MLA+EYGTASNIKS
Sbjct: 13 DDAADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKS 72
Query: 182 RTNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSL 361
R NRLSVL AITS Q +LKLYN+VP NGLVVYCGTIMTD+GKEKKV+IDFEPF+ +NTSL
Sbjct: 73 RVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSL 132
Query: 362 YLCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGG 541
YLCDNKFHTEAL LL D++KFGFII+DGNG LFGTL GNTR++LHKF+VDLPKKHGRGG
Sbjct: 133 YLCDNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPKKHGRGG 192
Query: 542 QSALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDL 721
QSA+RFARLR EKRHNYVRKVAE +V+ FI NDKV V G++LAGSADFK EL +SDMFD
Sbjct: 193 QSAVRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQ 252
Query: 722 RLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
RL AK++K VD++YGGE GFNQAIEL+AD+LA+VKFIQE+KLI +FDEI Q+T
Sbjct: 253 RLQAKMIKTVDIAYGGENGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDT 306
>sp|Q5CG95|ERF1_CRYHO Eukaryotic peptide chain release factor subunit 1 (eRF1)
(Eukaryotic release factor 1)
Length = 429
Score = 458 bits (1179), Expect = e-129
Identities = 219/293 (74%), Positives = 265/293 (90%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
+ +D NV+ WK+++LI +LEAARGNGTSMISL+IKP D+I+R++KMLADEYGTASNIKSR
Sbjct: 2 SDNDTNVKQWKVRRLIATLEAARGNGTSMISLVIKPKDEISRISKMLADEYGTASNIKSR 61
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NRLSVLSAITSTQQ+LKLYNR P NGLVVYCGT++T+DGKEKKV+IDFEPF+P+NTSLY
Sbjct: 62 VNRLSVLSAITSTQQRLKLYNRTPQNGLVVYCGTLITEDGKEKKVNIDFEPFKPINTSLY 121
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFH +AL LLE + KFGFIIVDGNGAL+G + G++R++L +F+VDLPKKHGRGGQ
Sbjct: 122 LCDNKFHVDALKELLETDDKFGFIIVDGNGALYGVVQGSSREVLLRFNVDLPKKHGRGGQ 181
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFITNDKVNVEGIVLAGSADFKNELHESDMFDLR 724
SALRFARLR+EKRHNY+RKVAETA MFITND+VNV ++LAGSADFKNEL +SD+FD R
Sbjct: 182 SALRFARLRMEKRHNYLRKVAETATTMFITNDQVNVAALILAGSADFKNELAQSDIFDQR 241
Query: 725 LLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
L +K+LK VDVSYGG+ GFNQAIELS+D+L NVKF+QE+KLI +FFDE+ Q+T
Sbjct: 242 LASKILKIVDVSYGGDNGFNQAIELSSDALQNVKFVQEKKLITKFFDEVAQDT 294
>sp|Q39097|ERFA_ARATH Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1)
(Eukaryotic release factor 1-1) (Omnipotent suppressor
protein 1 homolog 1) (SUP1 homolog 1)
Length = 436
Score = 449 bits (1154), Expect = e-126
Identities = 222/295 (75%), Positives = 254/295 (86%), Gaps = 2/295 (0%)
Frame = +2
Query: 5 NSSDNNVEMWKIKKLIHSLEAARGNGTSMISLIIKPGDQINRVAKMLADEYGTASNIKSR 184
N D N+E+WKIKKLI SLEAARGNGTSMISLI+ P DQ++RV KML DEYGTASNIKSR
Sbjct: 5 NDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSR 64
Query: 185 TNRLSVLSAITSTQQKLKLYNRVPTNGLVVYCGTIMTDDGKEKKVSIDFEPFRPVNTSLY 364
NR SVL AITS QQ+LKLYNRVP NGLV+Y GTI+ +DGKEKKV+IDFEPFRP+N SLY
Sbjct: 65 VNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPINASLY 124
Query: 365 LCDNKFHTEALSALLEDNSKFGFIIVDGNGALFGTLAGNTRDILHKFSVDLPKKHGRGGQ 544
LCDNKFHTEAL+ LLE + KFGFI++DGNG LFGTL+GNTR++LHKFSVDLPKKHGRGGQ
Sbjct: 125 LCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQ 184
Query: 545 SALRFARLRVEKRHNYVRKVAETAVQMFI--TNDKVNVEGIVLAGSADFKNELHESDMFD 718
SALRFARLR+EKRHNYVRK AE A Q +I + NV G++LAGSADFK EL +SDMFD
Sbjct: 185 SALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQSDMFD 244
Query: 719 LRLLAKVLKKVDVSYGGEQGFNQAIELSADSLANVKFIQEQKLIKRFFDEIHQNT 883
RL AK+L VDVSYGGE GFNQAIELSA+ LANVKFIQE++LI ++F+EI Q+T
Sbjct: 245 PRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDT 299
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,095,226
Number of Sequences: 369166
Number of extensions: 1859744
Number of successful extensions: 5220
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5177
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)