Planaria EST Database

DrC_00237

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00237
         (1328 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q29554|ECHA_PIG  Trifunctional enzyme alpha subunit, mito...   411   e-114
sp|P40939|ECHA_HUMAN  Trifunctional enzyme alpha subunit, mi...   405   e-112
sp|Q64428|ECHA_RAT  Trifunctional enzyme alpha subunit, mito...   400   e-111
sp|P77399|FADJ_ECOLI  Fatty acid oxidation complex alpha sub...   221   3e-57
sp|Q8X8I2|FADB_ECO57  Fatty oxidation complex alpha subunit ...   186   1e-46
sp|Q8ZAN0|FADB_YERPE  Fatty oxidation complex alpha subunit ...   186   2e-46
sp|P21177|FADB_ECOLI  Fatty oxidation complex alpha subunit ...   185   2e-46
sp|Q9L6L5|FADB_SALTY  Fatty oxidation complex alpha subunit ...   184   5e-46
sp|P28793|FAOB_PSEFR  Fatty oxidation complex alpha subunit ...   179   1e-44
sp|Q8Z3C6|FADB_SALTI  Fatty oxidation complex alpha subunit ...   179   2e-44

>sp|Q29554|ECHA_PIG Trifunctional enzyme alpha subunit, mitochondrial precursor
            (TP-alpha) (78 kDa gastrin-binding protein) [Includes:
            Long-chain enoyl-CoA hydratase ; Long chain
            3-hydroxyacyl-CoA dehydrogenase ]
          Length = 763

 Score =  411 bits (1056), Expect = e-114
 Identities = 213/414 (51%), Positives = 278/414 (67%), Gaps = 4/414 (0%)
 Frame = +1

Query: 22   CKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRNL 201
            CKKN+FG P+K  +H++ILGAGLMG+GI +VS+D+++ T LKD +L ALGRGQ ++ + L
Sbjct: 349  CKKNKFGAPQKEVKHLAILGAGLMGAGIAQVSVDKHLKTILKDASLPALGRGQQQVFKGL 408

Query: 202  KTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLPE 381
               V+KK  TSFE D +FS L    DY+  +  D+VIEAVFE+L LKHK++KEVE+ +P+
Sbjct: 409  NDKVRKKALTSFERDSLFSNLTGQLDYQGFEKADMVIEAVFEELSLKHKVLKEVEAVIPD 468

Query: 382  NVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVDV 561
            + VFA+NTSALPI +IA  SKRP KVIGMHYFSPV+KM LL             A AV+V
Sbjct: 469  HCVFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDSTASAVEV 528

Query: 562  GLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKVTRDFGWPVGSASLA 741
            GL+QGKV+IVV DGPGFYTTR L+ MM+E +R+LQEGV P +LD +T  FG+PVG+A+L 
Sbjct: 529  GLKQGKVIIVVKDGPGFYTTRCLAPMMSEVLRILQEGVGPKKLDSLTTSFGFPVGAATLM 588

Query: 742  DEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAAXXXXXXXXXXXXXXXXXXXIEN- 918
            DEVG+DVA HV + L    G R  GGN+D+LK M++                      N 
Sbjct: 589  DEVGMDVAKHVAENLGKIFGERFAGGNLDVLKQMISKGFLGRKSGKGFYVYQEGVKNRNV 648

Query: 919  ---TECLDILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAVYX 1089
               TE +    K   +P   +  E IQYRL +RFVNEAVLCLQ+GIL  P +GDIGAV+ 
Sbjct: 649  NSDTESILASLKIPSRPDISS-DEDIQYRLVTRFVNEAVLCLQEGILATPAEGDIGAVFG 707

Query: 1090 XXXXXXXXXXXRYLDNHGAEKIVKLMEHYSSQYGEEFKPCQLLIDHAKDPSKKF 1251
                       R++D +GA+K+V  +  Y + YG++F PCQLLIDHA  P+KKF
Sbjct: 708  LGFPPCLGGPFRFVDLYGAQKVVDRLRKYEAIYGKQFTPCQLLIDHASSPNKKF 761

>sp|P40939|ECHA_HUMAN Trifunctional enzyme alpha subunit, mitochondrial precursor
            (TP-alpha) (78 kDa gastrin-binding protein) [Includes:
            Long-chain enoyl-CoA hydratase ; Long chain
            3-hydroxyacyl-CoA dehydrogenase ]
          Length = 763

 Score =  405 bits (1042), Expect = e-112
 Identities = 210/414 (50%), Positives = 277/414 (66%), Gaps = 3/414 (0%)
 Frame = +1

Query: 22   CKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRNL 201
            CKKN+FG P+K  +H++ILGAGLMG+GI +VS+D+ + T LKD  L AL RGQ ++ + L
Sbjct: 349  CKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGL 408

Query: 202  KTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLPE 381
               VKKK  TSFE D IFS L    DY+  +  D+VIEAVFEDL LKH+++KEVE+ +P+
Sbjct: 409  NDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPD 468

Query: 382  NVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVDV 561
            + +FA+NTSALPI +IA  SKRP KVIGMHYFSPV+KM LL             A AV V
Sbjct: 469  HCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAV 528

Query: 562  GLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKVTRDFGWPVGSASLA 741
            GL+QGKV+IVV DGPGFYTTR L+ MM+E IR+LQEGV P +LD +T  FG+PVG+A+L 
Sbjct: 529  GLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLV 588

Query: 742  DEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAAXXXXXXXXXXXXXXXXXXXIE-- 915
            DEVG+DVA HV ++L    G R  GGN ++L  MV+                     +  
Sbjct: 589  DEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDL 648

Query: 916  NTECLDILKKYYVKPPTD-NFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAVYXX 1092
            N++   IL    + P ++ +  E IQ+RL +RFVNEAV+CLQ+GIL  P +GDIGAV+  
Sbjct: 649  NSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGL 708

Query: 1093 XXXXXXXXXXRYLDNHGAEKIVKLMEHYSSQYGEEFKPCQLLIDHAKDPSKKFH 1254
                      R++D +GA+KIV  ++ Y + YG++F PCQLL DHA  P+KKF+
Sbjct: 709  GFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFY 762

>sp|Q64428|ECHA_RAT Trifunctional enzyme alpha subunit, mitochondrial precursor
            (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase ;
            Long chain 3-hydroxyacyl-CoA dehydrogenase ]
          Length = 763

 Score =  400 bits (1027), Expect = e-111
 Identities = 215/414 (51%), Positives = 276/414 (66%), Gaps = 3/414 (0%)
 Frame = +1

Query: 22   CKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRNL 201
            CKKN+FG P+K  + ++ILGAGLMG+GI +VS+D+ + T LKD  +  LGRGQ ++ + L
Sbjct: 349  CKKNKFGAPQKTVQQLAILGAGLMGAGIAQVSVDKGLKTLLKDTTVTGLGRGQQQVFKGL 408

Query: 202  KTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLPE 381
               VKKK  TSFE D IFS L    DYK  +  D+VIEAVFEDL +KHK++KEVES  PE
Sbjct: 409  NDKVKKKALTSFERDSIFSNLIGQLDYKGFEKADMVIEAVFEDLAVKHKVLKEVESVTPE 468

Query: 382  NVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVDV 561
            + +FA+NTSALPI++IA  S+RP KVIGMHYFSPV+KM LL             A AV V
Sbjct: 469  HCIFASNTSALPINQIAAVSQRPEKVIGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAV 528

Query: 562  GLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKVTRDFGWPVGSASLA 741
            GL+QGKV+IVV DGPGFYTTR L+ MM+E IR+LQEGV P +LD +T  FG+PVG+A+LA
Sbjct: 529  GLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDALTTGFGFPVGAATLA 588

Query: 742  DEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAAXXXXXXXXXXXXXXXXXXXIE-- 915
            DEVGIDVA HV ++L  A G R  GG+V++LK MV+                     +  
Sbjct: 589  DEVGIDVAQHVAEDLGKAFGERFGGGSVELLKLMVSKGFLGRKSGKGFYIYQSGSKNKNL 648

Query: 916  NTECLDILKKYYV-KPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAVYXX 1092
            N+E  +IL    +   P  +  E IQYR+ +RFVNEAVLCLQ+GIL  P +GDIGAV+  
Sbjct: 649  NSEIDNILVNLRLPAKPEVSSDEDIQYRVITRFVNEAVLCLQEGILATPEEGDIGAVFGL 708

Query: 1093 XXXXXXXXXXRYLDNHGAEKIVKLMEHYSSQYGEEFKPCQLLIDHAKDPSKKFH 1254
                      R++D +GA+K+V  +  Y S YG +F PCQLL D A + SKKF+
Sbjct: 709  GFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQLLRDLANNSSKKFY 762

>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex alpha subunit [Includes: Enoyl-CoA
            hydratase ; 3-hydroxyacyl-CoA dehydrogenase ;
            3-hydroxybutyryl-CoA epimerase ]
          Length = 714

 Score =  221 bits (564), Expect = 3e-57
 Identities = 137/397 (34%), Positives = 200/397 (50%), Gaps = 4/397 (1%)
 Frame = +1

Query: 46   PKKPAEHISILGAGLMGSGITEVSIDR-NIPTSLKDINLEALGRGQDRIQRNLKTSVKKK 222
            P  P   + ILG GLMG GI  V+  +  IP  +KDIN + +          L+  V+++
Sbjct: 304  PPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRR 363

Query: 223  KYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLPENVVFATN 402
               + E DK  + +  TTDY+   + D++IEAVFE+L+LK +++ EVE     + +FA+N
Sbjct: 364  HLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASN 423

Query: 403  TSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVDVGLRQGKV 582
            TS+LPI  IA  + RP +VIG+H+FSPVEKMPL+             A  V +  +QGK 
Sbjct: 424  TSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKT 483

Query: 583  VIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKVTRDFGWPVGSASLADEVGIDV 762
             IVV D  GFY  RIL+  + EAIR+L +G     +D     FG+PVG   L DEVGID 
Sbjct: 484  PIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVGIDT 543

Query: 763  AFHVGQELELALGNRMKG-GNV--DILKDMVAAXXXXXXXXXXXXXXXXXXXIENTECLD 933
               +   LE A G R     NV   IL D                         +     
Sbjct: 544  GTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYP 603

Query: 934  ILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAVYXXXXXXXXX 1113
            ++     +      A ++  R     +NEAV C+ + ++    DGDIGAV+         
Sbjct: 604  LIG---TQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLG 660

Query: 1114 XXXRYLDNHGAEKIVKLMEHYSSQYGEEFKPCQLLID 1224
               RY+D+ GA ++V +M+  ++QYG  F PC+ L++
Sbjct: 661  GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVE 697

>sp|Q8X8I2|FADB_ECO57 Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 729

 Score =  186 bits (473), Expect = 1e-46
 Identities = 116/391 (29%), Positives = 180/391 (46%), Gaps = 5/391 (1%)
 Frame = +1

Query: 19   KCKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRN 198
            K K  +     +  +  ++LGAG+MG GI   S  + +P  +KDIN ++L  G     + 
Sbjct: 300  KGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLALGMTEAAKL 359

Query: 199  LKTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLP 378
            L   +++ K    +   + S +H T DY   +  D+V+EA+ E+  +K  ++ E E  + 
Sbjct: 360  LNKQLERGKIDGLKLAGVISTIHPTLDYAGFERVDVVVEAIVENPKVKKAVLAETEQKVR 419

Query: 379  ENVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVD 558
             + V A+NTS +PI ++A A +RP    GMH+F+PV +MPL+             A  V 
Sbjct: 420  PDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVA 479

Query: 559  VGLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKV-TRDFGWPVGSAS 735
               + GK  IVV D PGF+  R+L        +LL++G    ++DKV  + FGWP+G A 
Sbjct: 480  WASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAY 539

Query: 736  LADEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAA----XXXXXXXXXXXXXXXXX 903
            L D VGID A H    +      RM+    D +  +  A                     
Sbjct: 540  LLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWHYKEDSKGK 599

Query: 904  XXIENTECLDILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAV 1083
               E    +D L     +P  D   E I  R+    VNE V CL++GI+  P + D+  V
Sbjct: 600  PKKEEDAAVDDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALV 659

Query: 1084 YXXXXXXXXXXXXRYLDNHGAEKIVKLMEHY 1176
            Y            R+LD  G+ K + + + Y
Sbjct: 660  YGLGFPPFHGGAFRWLDTLGSAKYLDMAQQY 690

>sp|Q8ZAN0|FADB_YERPE Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 729

 Score =  186 bits (471), Expect = 2e-46
 Identities = 115/375 (30%), Positives = 181/375 (48%), Gaps = 5/375 (1%)
 Frame = +1

Query: 70   SILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRNLKTSVKKKKYTSFEADK 249
            ++LGAG+MG GI   S  +++P  +KDIN  +L  G +   + L   +++ K    +   
Sbjct: 317  AVLGAGIMGGGIAYQSALKSVPVIMKDINENSLDLGMNEAAKLLNKQLERGKVDGLKMAS 376

Query: 250  IFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLPENVVFATNTSALPIHKI 429
            I + +  T DY  ++   +++EAV E+  +K  ++ EVE+ + E+ V A+NTS +PI ++
Sbjct: 377  ILATIRPTLDYAGIERAQVIVEAVVENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQL 436

Query: 430  AEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVDVGLRQGKVVIVVADGPG 609
            A++ KRP    GMH+F+PV +MPL+             A  V    + GK  IVV D PG
Sbjct: 437  AKSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPG 496

Query: 610  FYTTRILSTMMTEAIRLLQEGVTPSELDKV-TRDFGWPVGSASLADEVGIDVAFHVGQEL 786
            F+  R+L   +     L+++G    ++DKV  + FGWP+G A L D VGID A H    +
Sbjct: 497  FFVNRVLFPYLAGFGMLVRDGGDFHQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVM 556

Query: 787  ELALGNRMK---GGNVDILKD-MVAAXXXXXXXXXXXXXXXXXXXIENTECLDILKKYYV 954
                  RM       VD++ D                         EN E +D L     
Sbjct: 557  AAGFPERMNKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKPRKENDEQVDKLLAEIS 616

Query: 955  KPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAVYXXXXXXXXXXXXRYLD 1134
            +P  +   E I  R     +NE V CL++GI+    +GD+  VY            RYLD
Sbjct: 617  QPLQEFSDEDIIARTMIPMINEVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLD 676

Query: 1135 NHGAEKIVKLMEHYS 1179
              G+   V++ + Y+
Sbjct: 677  TLGSANYVEMAQRYA 691

>sp|P21177|FADB_ECOLI Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 729

 Score =  185 bits (470), Expect = 2e-46
 Identities = 117/391 (29%), Positives = 180/391 (46%), Gaps = 5/391 (1%)
 Frame = +1

Query: 19   KCKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRN 198
            K K  +     +  +  ++LGAG+MG GI   S  + +P  +KDIN ++L  G     + 
Sbjct: 300  KGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKL 359

Query: 199  LKTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLP 378
            L   +++ K    +   + S +H T DY      DIV+EAV E+  +K  ++ E E  + 
Sbjct: 360  LNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVR 419

Query: 379  ENVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVD 558
            ++ V A+NTS +PI ++A A +RP    GMH+F+PV +MPL+             A  V 
Sbjct: 420  QDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVA 479

Query: 559  VGLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKV-TRDFGWPVGSAS 735
               + GK  IVV D PGF+  R+L        +LL++G    ++DKV  + FGWP+G A 
Sbjct: 480  WASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAY 539

Query: 736  LADEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAA----XXXXXXXXXXXXXXXXX 903
            L D VGID A H    +      RM+    D +  +  A                     
Sbjct: 540  LLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGK 599

Query: 904  XXIENTECLDILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAV 1083
               E    ++ L     +P  D   E I  R+    VNE V CL++GI+  P + D+  V
Sbjct: 600  PKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALV 659

Query: 1084 YXXXXXXXXXXXXRYLDNHGAEKIVKLMEHY 1176
            Y            R+LD  G+ K + + + Y
Sbjct: 660  YGLGFPPFHGGAFRWLDTLGSAKYLDMAQQY 690

>sp|Q9L6L5|FADB_SALTY Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 729

 Score =  184 bits (467), Expect = 5e-46
 Identities = 115/391 (29%), Positives = 178/391 (45%), Gaps = 5/391 (1%)
 Frame = +1

Query: 19   KCKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRN 198
            K K  +     +  +  ++LGAG+MG GI   S  + +P  +KDIN ++L  G     + 
Sbjct: 300  KGKAKKLTKDIETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLNLGMTEAAKL 359

Query: 199  LKTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLP 378
            L   +++ K    +   + S +H T DY      D+V+EAV E+  +K  ++ E E  + 
Sbjct: 360  LNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVR 419

Query: 379  ENVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVD 558
               V A+NTS +PI ++A A +RP    GMH+F+PV +MPL+             A  V 
Sbjct: 420  PETVLASNTSTIPIGELASALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVA 479

Query: 559  VGLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKV-TRDFGWPVGSAS 735
               + GK  IVV D PGF+  R+L        +LL++G    ++DKV  + FGWP+G A 
Sbjct: 480  WASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAY 539

Query: 736  LADEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAA----XXXXXXXXXXXXXXXXX 903
            L D VGID A H    +      RM+    D +  +  A                     
Sbjct: 540  LLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGK 599

Query: 904  XXIENTECLDILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAV 1083
               E    +D L     +P  D   + I  R+    +NE V CL++GI+  P + D+  V
Sbjct: 600  PKKEEDAAVDDLLASVSQPKRDFSDDEIIARMMIPMINEVVRCLEEGIIASPAEADMALV 659

Query: 1084 YXXXXXXXXXXXXRYLDNHGAEKIVKLMEHY 1176
            Y            R+LD  G+ K + + + Y
Sbjct: 660  YGLGFPPFHGGAFRWLDTQGSAKYLDMAQQY 690

>sp|P28793|FAOB_PSEFR Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 715

 Score =  179 bits (455), Expect = 1e-44
 Identities = 127/425 (29%), Positives = 194/425 (45%), Gaps = 9/425 (2%)
 Frame = +1

Query: 4    FLR*QKCKKNR--FGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRG 177
            FL  Q+ KK    +    K  +  ++LGAG+MG GI   S  +  P  +KDIN   + +G
Sbjct: 294  FLNDQELKKKAKVYDKIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG 353

Query: 178  QDRIQRNLKTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIK 357
                 + L   V K + T  +  ++ + +  T  Y +  N D+V+EAV E+  +K  ++ 
Sbjct: 354  LAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLA 413

Query: 358  EVESCLPENVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXX 537
            EVE+ + E+ + A+NTS + I  +A+A KRP   +GMH+F+PV  MPL+           
Sbjct: 414  EVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDL 473

Query: 538  XXAVAVDVGLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKVTRDFGW 717
              A  V    + GK  IVV D PGF   R+L        +L+  GV    +DKV   FGW
Sbjct: 474  AVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGW 533

Query: 718  PVGSASLADEVGIDVAFHVGQELELALGNRMKGGN---VDILKD--MVAAXXXXXXXXXX 882
            P+G A L D VGID   H    +     +RMK      +D L +   +            
Sbjct: 534  PMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYE 593

Query: 883  XXXXXXXXXIENTECLDILKK--YYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFD 1056
                     + ++  L++LK   Y  +  TD   E I   +      E V CL+DGI+  
Sbjct: 594  ADKKGKQKKLVDSSVLEVLKPIVYEQRDVTD---EDIINWMMIPLCLETVRCLEDGIVET 650

Query: 1057 PVDGDIGAVYXXXXXXXXXXXXRYLDNHGAEKIVKLMEHYSSQYGEEFKPCQLLIDHAKD 1236
              + D+G VY            RY+D+ G  + V L + Y ++ G  + P   L + AK+
Sbjct: 651  AAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAKN 709

Query: 1237 PSKKF 1251
                F
Sbjct: 710  GQSFF 714

>sp|Q8Z3C6|FADB_SALTI Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase
            ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ;
            3-hydroxyacyl-CoA dehydrogenase ; 3-hydroxybutyryl-CoA
            epimerase ]
          Length = 729

 Score =  179 bits (453), Expect = 2e-44
 Identities = 113/391 (28%), Positives = 177/391 (45%), Gaps = 5/391 (1%)
 Frame = +1

Query: 19   KCKKNRFGNPKKPAEHISILGAGLMGSGITEVSIDRNIPTSLKDINLEALGRGQDRIQRN 198
            K K  +     +  +  ++LGAG+MG GI   S  + +P  +KDIN ++L  G     + 
Sbjct: 300  KGKAKKLTKDIETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLNLGMTEAAKL 359

Query: 199  LKTSVKKKKYTSFEADKIFSKLHSTTDYKELKNTDIVIEAVFEDLDLKHKIIKEVESCLP 378
            L   +++ K    +   + S +H T DY      D+V+EAV E+  +K  ++ E E  + 
Sbjct: 360  LNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVR 419

Query: 379  ENVVFATNTSALPIHKIAEASKRPNKVIGMHYFSPVEKMPLLXXXXXXXXXXXXXAVAVD 558
               V A+NTS +PI ++A A +RP    GMH+F+PV +MPL+             A  V 
Sbjct: 420  PETVLASNTSTIPIGELASALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVA 479

Query: 559  VGLRQGKVVIVVADGPGFYTTRILSTMMTEAIRLLQEGVTPSELDKV-TRDFGWPVGSAS 735
               + GK  IVV + PGF+  R+L        +LL++G    ++DKV  + FGWP+G A 
Sbjct: 480  WASKMGKTPIVVNNCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAY 539

Query: 736  LADEVGIDVAFHVGQELELALGNRMKGGNVDILKDMVAA----XXXXXXXXXXXXXXXXX 903
            L D VGID A H    +      RM+    D +  +  A                     
Sbjct: 540  LLDVVGIDTAHHAQAVMAAGFPQRMQKEYRDAIDALFDASRFGQKNGLGFWRYKEDSKGK 599

Query: 904  XXIENTECLDILKKYYVKPPTDNFAERIQYRLFSRFVNEAVLCLQDGILFDPVDGDIGAV 1083
               E    +D L     +   D   + I  R+    +NE V CL++GI+  P + D+  V
Sbjct: 600  PKKEEDAAVDDLLASVSQTKRDFSDDEIIARMMIPMINEVVRCLEEGIIASPAEADMALV 659

Query: 1084 YXXXXXXXXXXXXRYLDNHGAEKIVKLMEHY 1176
            Y            R+LD  G+ K + + + Y
Sbjct: 660  YGLGFPPFHGGAFRWLDTQGSAKYLDMAQQY 690

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,853,680
Number of Sequences: 369166
Number of extensions: 2627770
Number of successful extensions: 7456
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7404
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15512822320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00237

  1. Dr_sW_006_M12
  2. Dr_sW_012_E17
  3. Dr_sW_008_C08