Planaria EST Database

DrC_00200

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00200
         (955 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22700|ATC1_DROME  Calcium-transporting ATPase sarcoplasm...   425   e-119
sp|P11507|AT2A2_RAT  Sarcoplasmic/endoplasmic reticulum calc...   419   e-117
sp|O55143|AT2A2_MOUSE  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|Q03669|AT2A2_CHICK  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|P20647|AT2A2_RABIT  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|P16615|AT2A2_HUMAN  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|O46674|AT2A2_CANFA  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|Q00779|AT2A2_FELCA  Sarcoplasmic/endoplasmic reticulum ca...   419   e-117
sp|P11607|AT2A2_PIG  Sarcoplasmic/endoplasmic reticulum calc...   419   e-117
sp|Q92105|AT2A1_RANES  Sarcoplasmic/endoplasmic reticulum ca...   417   e-116

>sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type
            (Calcium pump)
          Length = 1020

 Score =  425 bits (1093), Expect = e-119
 Identities = 211/287 (73%), Positives = 243/287 (84%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAKSA++MVLADDNFS+IV+AVEEGRAIYNNMKQFIRYLISSNIGEVV IFLTAALG+P
Sbjct: 725  AVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP 784

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIME+PPR   E LISGWLFFRYMAIG YV
Sbjct: 785  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYV 844

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ S +GP +SY+QLTHHL C    ++F GVDCK+F +   MTMALSVL
Sbjct: 845  GAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVL 904

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEMLNA+NSLSENQS+I MPPW N+WLI ++ LS +LHF+IL V  L+ VFQ++PLS 
Sbjct: 905  VTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSA 964

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRNQQNHKSIFNNCHMIVLMWAAF 862
             EW+TVMKFS PV+LLDE+LK ++R   + +S     H IVLMWA F
Sbjct: 965  EEWITVMKFSIPVVLLDETLKFVARKIADGESPIYKMHGIVLMWAVF 1011

>sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1043

 Score =  419 bits (1078), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1044

 Score =  419 bits (1078), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFDGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1041

 Score =  419 bits (1078), Expect = e-117
 Identities = 206/266 (77%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP V++YQL+H LQC  +  DF GVDC VF +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPDFSGVDCVVFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ AI LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLMRMPPWENIWLVGAICLSMSLHFLILYVEPLPIIFQITPLNV 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+LLDE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILLDETLKYVARN 989

>sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  419 bits (1077), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNV 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  419 bits (1077), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNV 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 997

 Score =  419 bits (1077), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKDDNPDFEGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 997

 Score =  419 bits (1077), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP VS+YQL+H LQC  +  DF GVDC +F +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKDDNPDFEGVDCAIFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  419 bits (1076), Expect = e-117
 Identities = 204/266 (76%), Positives = 234/266 (87%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWF+ +  GP V++YQL+H LQC  +  DF GVDC VF +  PMTMALSVL
Sbjct: 844  GAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPDFEGVDCAVFESPYPMTMALSVL 903

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V  L  +FQI+PL+ 
Sbjct: 904  VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
            ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964  TQWLMVLKISLPVILMDETLKFVARN 989

>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  417 bits (1071), Expect = e-116
 Identities = 203/266 (76%), Positives = 235/266 (88%)
 Frame = +2

Query: 2    AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
            AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG+P
Sbjct: 725  AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP 784

Query: 182  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
            EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM+RPPRSPKE LISGWLFFRYMAIG YV
Sbjct: 785  EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYV 844

Query: 362  GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
            GAATVG+AAWWFM + DGP+V++YQL+H +QC  +  DF G +C++F +  PMTMALSVL
Sbjct: 845  GAATVGAAAWWFMYADDGPNVTFYQLSHFMQCTEDNPDFEGHECEIFESPVPMTMALSVL 904

Query: 542  VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
            V IEM NALNSLSENQS+I+MPPW+N WL+ +I LSMSLHFLIL V  L  +F+++PL+ 
Sbjct: 905  VTIEMCNALNSLSENQSLIRMPPWSNFWLLGSICLSMSLHFLILYVEPLPMIFKLTPLNV 964

Query: 722  SEWLTVMKFSFPVLLLDESLKVISRN 799
             +W  V+K SFPV+LLDE LK ++RN
Sbjct: 965  EQWFIVLKMSFPVILLDELLKFVARN 990

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,595,851
Number of Sequences: 369166
Number of extensions: 2132670
Number of successful extensions: 6056
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6026
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9856975370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00200

  1. Dr_sW_006_A04
  2. Dr_sW_008_K08
  3. Dr_sW_005_M16