Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_008_K08 (858 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasm... 374 e-103 sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calc... 363 e-100 sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum ca... 363 e-100 sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calc... 362 e-100 sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum ca... 360 2e-99
>sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (Calcium pump) Length = 1020 Score = 374 bits (959), Expect = e-103 Identities = 184/260 (70%), Positives = 213/260 (81%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSNIGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 757 MKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 816 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 ME+PPR E LISGWLFFRYMAIG YVGAATVG+AAWWF+ S +GP +SY+QLTHHL C Sbjct: 817 MEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSC 876 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 ++F GVDCK+F + MTMALSVLV IEMLNA+NSLSENQS+I MPPW N+WLI + Sbjct: 877 LGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGS 936 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRNQQNHKS 721 + LS +LHF+IL V L+ VFQ++PLS EW+TVMKFS PV+LLDE+LK ++R + +S Sbjct: 937 MALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFVARKIADGES 996 Query: 722 IFNNCHMIVLMWAAFAAAVY 781 H IVLMWA F +Y Sbjct: 997 PIYKMHGIVLMWAVFFGLLY 1016
>sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1043 Score = 363 bits (932), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1044 Score = 363 bits (932), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KEDNPDFDGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1041 Score = 363 bits (932), Expect = e-100 Identities = 176/234 (75%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP V++YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC VF + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ A Sbjct: 876 KEDNPDFSGVDCVVFESPYPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWENIWLVGA 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+LLDE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPIIFQITPLNVTQWLMVLKISLPVILLDETLKYVARN 989
>sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1042 Score = 363 bits (931), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARN 989
>sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1042 Score = 363 bits (931), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARN 989
>sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 997 Score = 363 bits (931), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KDDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 997 Score = 363 bits (931), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP VS+YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC +F + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KDDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 1042 Score = 362 bits (930), Expect = e-100 Identities = 174/234 (74%), Positives = 202/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ + GP V++YQL+H LQC Sbjct: 816 MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQC 875 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF GVDC VF + PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ + Sbjct: 876 KEDNPDFEGVDCAVFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN Sbjct: 936 ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) Length = 994 Score = 360 bits (925), Expect = 2e-99 Identities = 173/234 (73%), Positives = 203/234 (86%) Frame = +2 Query: 2 MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181 MKQFIRYLISSN+GEVVCIFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI Sbjct: 757 MKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 816 Query: 182 MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361 M+RPPRSPKE LISGWLFFRYMAIG YVGAATVG+AAWWFM + DGP+V++YQL+H +QC Sbjct: 817 MDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYADDGPNVTFYQLSHFMQC 876 Query: 362 ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541 + DF G +C++F + PMTMALSVLV IEM NALNSLSENQS+I+MPPW+N WL+ + Sbjct: 877 TEDNPDFEGHECEIFESPVPMTMALSVLVTIEMCNALNSLSENQSLIRMPPWSNFWLLGS 936 Query: 542 ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703 I LSMSLHFLIL V L +F+++PL+ +W V+K SFPV+LLDE LK ++RN Sbjct: 937 ICLSMSLHFLILYVEPLPMIFKLTPLNVEQWFIVLKMSFPVILLDELLKFVARN 990
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,132,583 Number of Sequences: 369166 Number of extensions: 1883067 Number of successful extensions: 5322 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5299 length of database: 68,354,980 effective HSP length: 109 effective length of database: 48,218,865 effective search space used: 8486520240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)