Planarian EST Database


Dr_sW_008_K08

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_008_K08
         (858 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22700|ATC1_DROME  Calcium-transporting ATPase sarcoplasm...   374   e-103
sp|P11507|AT2A2_RAT  Sarcoplasmic/endoplasmic reticulum calc...   363   e-100
sp|O55143|AT2A2_MOUSE  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|Q03669|AT2A2_CHICK  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|P20647|AT2A2_RABIT  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|P16615|AT2A2_HUMAN  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|O46674|AT2A2_CANFA  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|Q00779|AT2A2_FELCA  Sarcoplasmic/endoplasmic reticulum ca...   363   e-100
sp|P11607|AT2A2_PIG  Sarcoplasmic/endoplasmic reticulum calc...   362   e-100
sp|Q92105|AT2A1_RANES  Sarcoplasmic/endoplasmic reticulum ca...   360   2e-99
>sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type
            (Calcium pump)
          Length = 1020

 Score =  374 bits (959), Expect = e-103
 Identities = 184/260 (70%), Positives = 213/260 (81%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSNIGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 757  MKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 816

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            ME+PPR   E LISGWLFFRYMAIG YVGAATVG+AAWWF+ S +GP +SY+QLTHHL C
Sbjct: 817  MEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSC 876

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
                ++F GVDCK+F +   MTMALSVLV IEMLNA+NSLSENQS+I MPPW N+WLI +
Sbjct: 877  LGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGS 936

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRNQQNHKS 721
            + LS +LHF+IL V  L+ VFQ++PLS  EW+TVMKFS PV+LLDE+LK ++R   + +S
Sbjct: 937  MALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFVARKIADGES 996

Query: 722  IFNNCHMIVLMWAAFAAAVY 781
                 H IVLMWA F   +Y
Sbjct: 997  PIYKMHGIVLMWAVFFGLLY 1016
>sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1043

 Score =  363 bits (932), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1044

 Score =  363 bits (932), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KEDNPDFDGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1041

 Score =  363 bits (932), Expect = e-100
 Identities = 176/234 (75%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP V++YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC VF +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ A
Sbjct: 876  KEDNPDFSGVDCVVFESPYPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWENIWLVGA 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+LLDE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPIIFQITPLNVTQWLMVLKISLPVILLDETLKYVARN 989
>sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  363 bits (931), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARN 989
>sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  363 bits (931), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARN 989
>sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 997

 Score =  363 bits (931), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KDDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 997

 Score =  363 bits (931), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP VS+YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC +F +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KDDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  362 bits (930), Expect = e-100
 Identities = 174/234 (74%), Positives = 202/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 756  MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 815

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M +PPR+PKE LISGWLFFRY+AIGCYVGAATVG+AAWWF+ +  GP V++YQL+H LQC
Sbjct: 816  MNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQC 875

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF GVDC VF +  PMTMALSVLV IEM NALNSLSENQS+++MPPW NIWL+ +
Sbjct: 876  KEDNPDFEGVDCAVFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGS 935

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +FQI+PL+ ++WL V+K S PV+L+DE+LK ++RN
Sbjct: 936  ICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  360 bits (925), Expect = 2e-99
 Identities = 173/234 (73%), Positives = 203/234 (86%)
 Frame = +2

Query: 2    MKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 181
            MKQFIRYLISSN+GEVVCIFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDI
Sbjct: 757  MKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 816

Query: 182  MERPPRSPKESLISGWLFFRYMAIGCYVGAATVGSAAWWFMRSPDGPSVSYYQLTHHLQC 361
            M+RPPRSPKE LISGWLFFRYMAIG YVGAATVG+AAWWFM + DGP+V++YQL+H +QC
Sbjct: 817  MDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYADDGPNVTFYQLSHFMQC 876

Query: 362  ALEPNDFIGVDCKVFLNSKPMTMALSVLVLIEMLNALNSLSENQSIIKMPPWTNIWLILA 541
              +  DF G +C++F +  PMTMALSVLV IEM NALNSLSENQS+I+MPPW+N WL+ +
Sbjct: 877  TEDNPDFEGHECEIFESPVPMTMALSVLVTIEMCNALNSLSENQSLIRMPPWSNFWLLGS 936

Query: 542  ITLSMSLHFLILEVGFLAKVFQISPLSFSEWLTVMKFSFPVLLLDESLKVISRN 703
            I LSMSLHFLIL V  L  +F+++PL+  +W  V+K SFPV+LLDE LK ++RN
Sbjct: 937  ICLSMSLHFLILYVEPLPMIFKLTPLNVEQWFIVLKMSFPVILLDELLKFVARN 990
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,132,583
Number of Sequences: 369166
Number of extensions: 1883067
Number of successful extensions: 5322
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5299
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)