Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_A04
(829 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calc... 419 e-117
sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum ca... 419 e-117
sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calc... 419 e-117
sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum ca... 417 e-116
sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum ca... 416 e-116
>sp|P11507|AT2A2_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1043
Score = 419 bits (1078), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1044
Score = 419 bits (1078), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFDGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1041
Score = 419 bits (1078), Expect = e-117
Identities = 206/266 (77%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP V++YQL+H LQC + DF GVDC VF + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPDFSGVDCVVFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ AI LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLMRMPPWENIWLVGAICLSMSLHFLILYVEPLPIIFQITPLNV 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+LLDE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILLDETLKYVARN 989
>sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1042
Score = 419 bits (1077), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNV 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1042
Score = 419 bits (1077), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNV 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 997
Score = 419 bits (1077), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKDDNPDFEGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 997
Score = 419 bits (1077), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP VS+YQL+H LQC + DF GVDC +F + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKDDNPDFEGVDCAIFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
(SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
ATPase sarcoplasmic reticulum type, slow twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 1042
Score = 419 bits (1076), Expect = e-117
Identities = 204/266 (76%), Positives = 234/266 (87%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG P
Sbjct: 724 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPR+PKE LISGWLFFRY+AIGCYV
Sbjct: 784 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYV 843
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWF+ + GP V++YQL+H LQC + DF GVDC VF + PMTMALSVL
Sbjct: 844 GAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPDFEGVDCAVFESPYPMTMALSVL 903
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+++MPPW NIWL+ +I LSMSLHFLIL V L +FQI+PL+
Sbjct: 904 VTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNL 963
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
++WL V+K S PV+L+DE+LK ++RN
Sbjct: 964 TQWLMVLKISLPVILMDETLKFVARN 989
>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
(SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
ATPase sarcoplasmic reticulum type, fast twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 994
Score = 417 bits (1071), Expect = e-116
Identities = 203/266 (76%), Positives = 235/266 (88%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAK+AS+MVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG+P
Sbjct: 725 AVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP 784
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM+RPPRSPKE LISGWLFFRYMAIG YV
Sbjct: 785 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYV 844
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG+AAWWFM + DGP+V++YQL+H +QC + DF G +C++F + PMTMALSVL
Sbjct: 845 GAATVGAAAWWFMYADDGPNVTFYQLSHFMQCTEDNPDFEGHECEIFESPVPMTMALSVL 904
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+I+MPPW+N WL+ +I LSMSLHFLIL V L +F+++PL+
Sbjct: 905 VTIEMCNALNSLSENQSLIRMPPWSNFWLLGSICLSMSLHFLILYVEPLPMIFKLTPLNV 964
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
+W V+K SFPV+LLDE LK ++RN
Sbjct: 965 EQWFIVLKMSFPVILLDELLKFVARN 990
>sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
(SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
ATPase sarcoplasmic reticulum type, fast twitch skeletal
muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
ATPase)
Length = 996
Score = 416 bits (1069), Expect = e-116
Identities = 203/266 (76%), Positives = 231/266 (86%)
Frame = +2
Query: 2 AVAKSASDMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMP 181
AVAKSAS+MVLADDNFS+IVAAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG+P
Sbjct: 722 AVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP 781
Query: 182 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMERPPRSPKESLISGWLFFRYMAIGCYV 361
EALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRSPKE LISGWLFFRYMAIG YV
Sbjct: 782 EALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSPKEPLISGWLFFRYMAIGGYV 841
Query: 362 GAATVGSAAWWFMRSPDGPSVSYYQLTHHLQCALEPNDFIGVDCKVFLNSKPMTMALSVL 541
GAATVG AAWWF+ GP+V+YYQL+H +QC DF GVDC +F S PMTMALSVL
Sbjct: 842 GAATVGGAAWWFLYDSTGPAVTYYQLSHFMQCHNHNEDFTGVDCDIFEASPPMTMALSVL 901
Query: 542 VLIEMLNALNSLSENQSIIKMPPWTNIWLILAITLSMSLHFLILEVGFLAKVFQISPLSF 721
V IEM NALNSLSENQS+I+MPPW+N+WL+ A+TLSMSLHF+I+ V L +F+++ L+F
Sbjct: 902 VTIEMCNALNSLSENQSLIRMPPWSNLWLMAAMTLSMSLHFMIIYVDPLPMIFKLTHLTF 961
Query: 722 SEWLTVMKFSFPVLLLDESLKVISRN 799
+WL V K SFPV+L+DE LK +RN
Sbjct: 962 DQWLMVFKLSFPVILIDEVLKFFARN 987
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,878,360
Number of Sequences: 369166
Number of extensions: 1935997
Number of successful extensions: 5715
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5685
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8004331590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)