Planaria EST Database

DrC_00184

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00184
         (945 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91828|AR11_XENLA  Apoptosis regulator R11 (XR11)               54   8e-07
sp|Q07816|BCLX_CHICK  Apoptosis regulator Bcl-X (Bcl-2-like ...    54   8e-07
sp|P53563|BCLX_RAT  Apoptosis regulator Bcl-X (Bcl-2-like 1 ...    50   9e-06
sp|Q64373|BCLX_MOUSE  Apoptosis regulator Bcl-X (Bcl-2-like ...    50   9e-06
sp|Q07817|BCLX_HUMAN  Apoptosis regulator Bcl-X (Bcl-2-like ...    50   1e-05
sp|Q00709|BCL2_CHICK  Apoptosis regulator Bcl-2                    49   2e-05
sp|O77737|BCLX_PIG  Apoptosis regulator Bcl-X (Bcl-2-like 1 ...    49   2e-05
sp|P10415|BCL2_HUMAN  Apoptosis regulator Bcl-2                    48   4e-05
sp|Q9JJV8|BCL2_CRIGR  Apoptosis regulator Bcl-2                    48   4e-05
sp|P10417|BCL2_MOUSE  Apoptosis regulator Bcl-2                    48   4e-05

>sp|Q91828|AR11_XENLA Apoptosis regulator R11 (XR11)
          Length = 204

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
 Frame = +3

Query: 126 EDEMILSLHNLVNDARERGKETISNFKLVLNKHTDEEKKISFYDVVESLFEDCIKWSRVI 305
           E+E++ +L     +   R +   S+    L+   D  ++ SF  V+  LF D   W R++
Sbjct: 55  EEEVLQALLEATEEFELRYQRAFSDLTSQLHITQDTAQQ-SFQQVMGELFRDGTNWGRIV 113

Query: 306 VAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPWVRENGGWEHIIQL--SNSRN 464
             F +     +    K       +   W +  +   + PW++ENGGWE  + L   N+  
Sbjct: 114 AFFSFGRALCVESANKEMTDLLPRIVQWMVNYLEHTLQPWMQENGGWEAFVGLYGKNAAA 173

Query: 465 HLDEVTDLFKKLGTVALGITGLFAL 539
              E  + F +L T+ + +TG+FAL
Sbjct: 174 QSRESQERFGRLLTIVM-LTGVFAL 197

>sp|Q07816|BCLX_CHICK Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 229

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
 Frame = +3

Query: 246 SFYDVVESLFEDCIKWSRVIVAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPW 410
           SF  VV  LF D + W R++  F +     +  V K  +    +  +W    +   + PW
Sbjct: 118 SFEQVVNELFHDGVNWGRIVAFFSFGGALCVESVDKEMRVLVGRIVSWMTTYLTDHLDPW 177

Query: 411 VRENGGWEHIIQL--SNSRNHLDEVTDLFKKLGTVALGITGLFALG 542
           ++ENGGWE  + L  +N+   L +  + F K       + G+  LG
Sbjct: 178 IQENGGWERFVDLYGNNAAAELRKGQETFNKWLLTGATVAGVLLLG 223

>sp|P53563|BCLX_RAT Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
 Frame = +3

Query: 246 SFYDVVESLFEDCIKWSRVIVAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPW 410
           SF  VV  LF D + W R++  F +     +  V K  Q    +  +W    +   + PW
Sbjct: 122 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPW 181

Query: 411 VRENGGWEHIIQL--SNSRNHLDEVTDLFKKLGTVALGITGLFALG 542
           ++ENGGW+  + L  +N+     +  + F +     + + G+  LG
Sbjct: 182 IQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLG 227

>sp|Q64373|BCLX_MOUSE Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
 Frame = +3

Query: 246 SFYDVVESLFEDCIKWSRVIVAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPW 410
           SF  VV  LF D + W R++  F +     +  V K  Q    +  +W    +   + PW
Sbjct: 122 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPW 181

Query: 411 VRENGGWEHIIQL--SNSRNHLDEVTDLFKKLGTVALGITGLFALG 542
           ++ENGGW+  + L  +N+     +  + F +     + + G+  LG
Sbjct: 182 IQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLG 227

>sp|Q07817|BCLX_HUMAN Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
 Frame = +3

Query: 246 SFYDVVESLFEDCIKWSRVIVAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPW 410
           SF  VV  LF D + W R++  F +     +  V K  Q    +   W    +   + PW
Sbjct: 122 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPW 181

Query: 411 VRENGGWEHIIQL--SNSRNHLDEVTDLFKKLGTVALGITGLFALG 542
           ++ENGGW+  ++L  +N+     +  + F +     + + G+  LG
Sbjct: 182 IQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLG 227

>sp|Q00709|BCL2_CHICK Apoptosis regulator Bcl-2
          Length = 233

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +3

Query: 249 FYDVVESLFEDCIKWSRVIVAF-----MYIVQVLKISQKEYDKYYNWSIELVLTKIHPWV 413
           F  VVE LF D + W R++  F     M +  V +      D    W  E +   +H W+
Sbjct: 124 FVAVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIATWMTEYLNRHLHNWI 183

Query: 414 RENGGWEHIIQL 449
           ++NGGW+  ++L
Sbjct: 184 QDNGGWDAFVEL 195

>sp|O77737|BCLX_PIG Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
 Frame = +3

Query: 246 SFYDVVESLFEDCIKWSRVIVAFMY-----IVQVLKISQKEYDKYYNWSIELVLTKIHPW 410
           SF  V+  LF D + W R++  F +     +  V K  Q    +   W    +   + PW
Sbjct: 122 SFEQVLNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIATWMATYLNDHLEPW 181

Query: 411 VRENGGWEHIIQL--SNSRNHLDEVTDLFKKLGTVALGITGLFALG 542
           ++ENGGW+  ++L  +N+     +  + F +     + + G+  LG
Sbjct: 182 IQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTLAGVVLLG 227

>sp|P10415|BCL2_HUMAN Apoptosis regulator Bcl-2
          Length = 239

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +3

Query: 249 FYDVVESLFEDCIKWSRVIVAF-----MYIVQVLKISQKEYDKYYNWSIELVLTKIHPWV 413
           F  VVE LF D + W R++  F     M +  V +      D    W  E +   +H W+
Sbjct: 130 FATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWI 189

Query: 414 RENGGWEHIIQL 449
           ++NGGW+  ++L
Sbjct: 190 QDNGGWDAFVEL 201

>sp|Q9JJV8|BCL2_CRIGR Apoptosis regulator Bcl-2
          Length = 236

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +3

Query: 249 FYDVVESLFEDCIKWSRVIVAF-----MYIVQVLKISQKEYDKYYNWSIELVLTKIHPWV 413
           F  VVE LF D + W R++  F     M +  V +      D    W  E +   +H W+
Sbjct: 127 FATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWI 186

Query: 414 RENGGWEHIIQL 449
           ++NGGW+  ++L
Sbjct: 187 QDNGGWDAFVEL 198

>sp|P10417|BCL2_MOUSE Apoptosis regulator Bcl-2
          Length = 236

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +3

Query: 249 FYDVVESLFEDCIKWSRVIVAF-----MYIVQVLKISQKEYDKYYNWSIELVLTKIHPWV 413
           F  VVE LF D + W R++  F     M +  V +      D    W  E +   +H W+
Sbjct: 127 FATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWI 186

Query: 414 RENGGWEHIIQL 449
           ++NGGW+  ++L
Sbjct: 187 QDNGGWDAFVEL 198

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,958,256
Number of Sequences: 369166
Number of extensions: 2170103
Number of successful extensions: 5249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5231
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9798962520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00184

  1. Dr_sW_005_J17
  2. Dr_sW_008_F20
  3. Dr_sW_006_A14