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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00139
         (1330 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05165|PCCA_HUMAN  Propionyl-CoA carboxylase alpha chain,...   387   e-107
sp|Q91ZA3|PCCA_MOUSE  Propionyl-CoA carboxylase alpha chain,...   377   e-104
sp|P14882|PCCA_RAT  Propionyl-CoA carboxylase alpha chain, m...   377   e-104
sp|Q96RQ3|MCCA_HUMAN  Methylcrotonoyl-CoA carboxylase alpha ...   167   6e-41
sp|Q99MR8|MCCA_MOUSE  Methylcrotonoyl-CoA carboxylase alpha ...   164   4e-40
sp|Q42777|MCCA_SOYBN  Methylcrotonoyl-CoA carboxylase alpha ...   154   7e-37
sp|Q58626|PYCA_METJA  Pyruvate carboxylase subunit A (Pyruvi...   147   5e-35
sp|P49787|ACCC_BACSU  Biotin carboxylase (A subunit of acety...   134   8e-31
sp|Q42523|MCCA_ARATH  Methylcrotonoyl-CoA carboxylase alpha ...   129   2e-29
sp|O30019|PYCA_ARCFU  Pyruvate carboxylase subunit A (Pyruvi...   129   2e-29

>sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial precursor
            (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide
            ligase alpha subunit)
          Length = 703

 Score =  387 bits (993), Expect = e-107
 Identities = 199/394 (50%), Positives = 275/394 (69%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E ITG+D+V +MIRV KG+PL  KQ+DI +NGWAVECRVYAEDPYKSFG
Sbjct: 326  NTRLQVEHPVTECITGLDLVQEMIRVAKGYPLRHKQADIRINGWAVECRVYAEDPYKSFG 385

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            LPS+GRL+ Y+EPLH+P VR DSGIQ GS+ISIYYDPMI KL+TYG +R  AL  M  AL
Sbjct: 386  LPSIGRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLITYGSDRTEALKRMADAL 445

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGFKGKQLSPKETGLLEAMSA 543
            D+YVIRGVTHNI LLR+++   RFV G+I+T +L +VYPDGFKG  L+  E   L A+++
Sbjct: 446  DNYVIRGVTHNIALLREVIINSRFVKGDISTKFLSDVYPDGFKGHMLTKSEKNQLLAIAS 505

Query: 544  VVFVKNEIRNKTFLKRDRTSIGQNPESFRGDLSHPEEWNLSISHGLDSKDKTQNLHVTVS 723
             +FV  ++R + F +  R  +       + D+++   W LS+   L  K  T    V  S
Sbjct: 506  SLFVAFQLRAQHFQENSRMPV------IKPDIAN---WELSVK--LHDKVHT----VVAS 550

Query: 724  DDRSVFHVAFENGHSFEIKNNFHLADKIIVQNIDNEEIILQLMNRNYSGYVTFQYMGTKY 903
            ++ SVF V  + G    + + ++LA  ++  ++D  +  +Q ++R   G ++ Q++GT Y
Sbjct: 551  NNGSVFSVEVD-GSKLNVTSTWNLASPLLSVSVDGTQRTVQCLSREAGGNMSIQFLGTVY 609

Query: 904  RLKVESILGHSLTKFMLPKKVIDTSSVIIAPMPGLVKSVAVKVGQRVSEGQELCVLEAMK 1083
            ++ + + L   L KFML K   DTSSV+ +PMPG+V +V+VK G  V+EGQE+CV+EAMK
Sbjct: 610  KVNILTRLAAELNKFMLEKVTEDTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMK 669

Query: 1084 MQNSMVAAKTGVIKSIHFQAGQTVSDDDVIIELE 1185
            MQNSM A KTG +KS+H QAG TV + D+++ELE
Sbjct: 670  MQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 703

>sp|Q91ZA3|PCCA_MOUSE Propionyl-CoA carboxylase alpha chain, mitochondrial precursor
            (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide
            ligase alpha subunit)
          Length = 724

 Score =  377 bits (969), Expect = e-104
 Identities = 195/394 (49%), Positives = 271/394 (68%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E ITG+D+V +MI V KG+PL  KQ DI ++GWAVECRVYAEDPYKSFG
Sbjct: 347  NTRLQVEHPVTECITGLDLVQEMILVAKGYPLRHKQEDIPISGWAVECRVYAEDPYKSFG 406

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            LPS+GRL+ Y+EP+H+P VR DSGIQ GS+ISIYYDPMI KLVTYG +R  AL  M  AL
Sbjct: 407  LPSIGRLSQYQEPIHLPGVRVDSGIQPGSDISIYYDPMISKLVTYGSDRAEALKRMEDAL 466

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGFKGKQLSPKETGLLEAMSA 543
            D+YVIRGVTHNIPLLR+++   RFV G+I+T +L +VYPDGFKG  L+  E   L A+++
Sbjct: 467  DNYVIRGVTHNIPLLREVIINTRFVKGDISTKFLSDVYPDGFKGHTLTLSERNQLLAIAS 526

Query: 544  VVFVKNEIRNKTFLKRDRTSIGQNPESFRGDLSHPEEWNLSISHGLDSKDKTQNLHVTVS 723
             VFV +++R + F +  R  +       R D++   +W LS+   L  +D T    V  S
Sbjct: 527  SVFVASQLRAQRFQEHSRVPV------IRPDVA---KWELSVK--LHDEDHT----VVAS 571

Query: 724  DDRSVFHVAFENGHSFEIKNNFHLADKIIVQNIDNEEIILQLMNRNYSGYVTFQYMGTKY 903
            ++   F V  + G    + + ++LA  ++  N+D  +  +Q ++R   G ++ Q++GT Y
Sbjct: 572  NNGPAFTVEVD-GSKLNVTSTWNLASPLLSVNVDGTQRTVQCLSREAGGNMSIQFLGTVY 630

Query: 904  RLKVESILGHSLTKFMLPKKVIDTSSVIIAPMPGLVKSVAVKVGQRVSEGQELCVLEAMK 1083
            ++ + + L   L KFML K   DTSS + +PMPG+V +V+VK G  V+EGQE+CV+EAMK
Sbjct: 631  KVHILTKLAAELNKFMLEKVPKDTSSTLCSPMPGVVVAVSVKPGDMVAEGQEICVIEAMK 690

Query: 1084 MQNSMVAAKTGVIKSIHFQAGQTVSDDDVIIELE 1185
            MQNSM A K G +K +H +AG TV + D+++ELE
Sbjct: 691  MQNSMTAGKMGKVKLVHCKAGDTVGEGDLLVELE 724

>sp|P14882|PCCA_RAT Propionyl-CoA carboxylase alpha chain, mitochondrial precursor
            (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide
            ligase alpha subunit)
          Length = 704

 Score =  377 bits (967), Expect = e-104
 Identities = 194/394 (49%), Positives = 273/394 (69%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E ITG+D+V +MI V KG+PL  KQ DI ++GWAVECRVYAEDPYKSFG
Sbjct: 327  NTRLQVEHPVTECITGLDLVQEMILVAKGYPLRHKQEDIPISGWAVECRVYAEDPYKSFG 386

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            LPS+GRL+ Y+EP+H+P VR DSGIQ GS+ISIY+DPMI KLVTYG +R  AL  M  AL
Sbjct: 387  LPSIGRLSQYQEPIHLPGVRVDSGIQPGSDISIYHDPMISKLVTYGSDRAEALKRMEDAL 446

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGFKGKQLSPKETGLLEAMSA 543
            DSYVIRGVTHNIPLLR+++   RFV G+I+T +L +VYPDGFKG  L+P E   L A+++
Sbjct: 447  DSYVIRGVTHNIPLLREVIINTRFVKGDISTKFLSDVYPDGFKGHMLTPSERDQLLAIAS 506

Query: 544  VVFVKNEIRNKTFLKRDRTSIGQNPESFRGDLSHPEEWNLSISHGLDSKDKTQNLHVTVS 723
             +FV +++R + F +  R  +       R D++   +W LS+   L  +D T    V  S
Sbjct: 507  SLFVASQLRAQRFQEHSRVPV------IRPDVA---KWELSVK--LHDEDHT----VVAS 551

Query: 724  DDRSVFHVAFENGHSFEIKNNFHLADKIIVQNIDNEEIILQLMNRNYSGYVTFQYMGTKY 903
            ++   F+V  + G    + + ++LA  ++  N+D  +  +Q ++ +  G ++ Q++GT Y
Sbjct: 552  NNGPTFNVEVD-GSKLNVTSTWNLASPLLSVNVDGTQRTVQCLSPDAGGNMSIQFLGTVY 610

Query: 904  RLKVESILGHSLTKFMLPKKVIDTSSVIIAPMPGLVKSVAVKVGQRVSEGQELCVLEAMK 1083
            ++ + + L   L KFML K   DTSSV+ +P PG+V +V+VK G  V+EGQE+CV+EAMK
Sbjct: 611  KVHILTKLAAELNKFMLEKVPKDTSSVLRSPKPGVVVAVSVKPGDMVAEGQEICVIEAMK 670

Query: 1084 MQNSMVAAKTGVIKSIHFQAGQTVSDDDVIIELE 1185
            MQNSM A K G +K +H +AG TV + D+++ELE
Sbjct: 671  MQNSMTAGKMGKVKLVHCKAGDTVGEGDLLVELE 704

>sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial precursor
            (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha
            subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
            alpha subunit) (3-Methylcrotonyl-CoA carboxylase
            biotin-containing subunit)
          Length = 725

 Score =  167 bits (423), Expect = 6e-41
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 9/403 (2%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E+ITG D+V   +R+  G  + L Q +I++ G A E R+YAEDP  +F 
Sbjct: 337  NTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPSNNF- 395

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            +P  G L     P   P+ R ++G+++G E+S++YDPMI KLV +  +R  AL  +  +L
Sbjct: 396  MPVAGPLVHLSTPRADPSTRIETGVRQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSL 455

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGFKGKQLSPKETGLLEAMSA 543
              Y I G+  NI  L ++   P F +GN+ T+++P+ +      ++ + KE+    A+  
Sbjct: 456  RQYNIVGLPTNIDFLLNLSGHPEFEAGNVHTDFIPQHHKQLLLSRKAAAKESLCQAALGL 515

Query: 544  VVFVKNEIRNKTFLKRDRTSIGQNPESFRGDLSHPEEWNLSISHGLDSKDKTQNLHVTVS 723
            ++  K      T    D+ S    P S     S     N+S +  +  KD   N+ + V+
Sbjct: 516  ILKEKAMTDTFTLQAHDQFS----PFS----SSSGRRLNISYTRNMTLKDGKNNVAIAVT 567

Query: 724  DDRSVFHVAFENGHSFEIKNNFHLAD-----KIIVQNIDNEEIILQLMNRNY----SGYV 876
             +    +       +F++  N +        K  V  + ++  ++ L N  Y     G +
Sbjct: 568  YNHDGSYSMQIEDKTFQVLGNLYSEGDCTYLKCSVNGVASKAKLIILENTIYLFSKEGSI 627

Query: 877  TFQYMGTKYRLKVESILGHSLTKFMLPKKVIDTSSVIIAPMPGLVKSVAVKVGQRVSEGQ 1056
                   KY   V S                +T    +APM G ++ V VK G +V  G 
Sbjct: 628  EIDIPVPKYLSSVSS---------------QETQGGPLAPMTGTIEKVFVKAGDKVKAGD 672

Query: 1057 ELCVLEAMKMQNSMVAAKTGVIKSIHFQAGQTVSDDDVIIELE 1185
             L V+ AMKM++++ + K G +K + ++ G   +    ++E E
Sbjct: 673  SLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFE 715

>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial precursor
            (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha
            subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
            alpha subunit) (3-Methylcrotonyl-CoA carboxylase
            biotin-containing subunit)
          Length = 717

 Score =  164 bits (416), Expect = 4e-40
 Identities = 112/399 (28%), Positives = 188/399 (47%), Gaps = 5/399 (1%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E+ITG D+V   +R+  G  + L Q +I + G A E R+YAEDP  +F 
Sbjct: 333  NTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEIPLQGHAFEARIYAEDPDNNF- 391

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            +P  G L     P    + R ++G+++G E+S++YDPMI KLV +  +R  AL+ +   L
Sbjct: 392  MPGAGPLVHLSTPSADMSTRIETGVRQGDEVSVHYDPMIAKLVVWASDRQSALSKLRYCL 451

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGFKGKQLSPKETGLLEAMSA 543
              Y I G+  N+  L  +   P F +GN+ T+++P+ + D         KE+    A+  
Sbjct: 452  HQYNIVGLRSNVDFLLRLSGHPEFEAGNVHTDFIPQHHKDLLPSHSTIAKESVCQAALGL 511

Query: 544  VVFVKNEIRNKTFLKRDRTSIGQNPESFRGDLSHPEEWNLSISHGLDSKDKTQNLHVTVS 723
            ++  K          +D+ S    P SF    S     N+S +  +  +    ++ + V+
Sbjct: 512  ILKEKEMTSAFKLHTQDQFS----PFSF----SSGRRLNISYTRNMTLRSGKSDIVIAVT 563

Query: 724  DDRSVFHVAFENGHSFEIKNNFHLAD-----KIIVQNIDNEEIILQLMNRNYSGYVTFQY 888
             +R   +    +  SF +  +    D     K  +  +  +   + L N       T   
Sbjct: 564  YNRDGSYDMQIDNKSFRVLGDLSSEDGCTYLKSSINGVARKSKFILLDN-------TVHL 616

Query: 889  MGTKYRLKVESILGHSLTKFMLPKKVIDTSSVIIAPMPGLVKSVAVKVGQRVSEGQELCV 1068
               +  ++V    G  + K++ P          IAPM G ++ V VK G RV  G  L V
Sbjct: 617  FSMEGSIEV----GIPVPKYLSPVSAEGAQGGTIAPMTGTIEKVFVKAGDRVKAGDSLMV 672

Query: 1069 LEAMKMQNSMVAAKTGVIKSIHFQAGQTVSDDDVIIELE 1185
            + AMKM++++ A K G IK + F  G   +    ++E E
Sbjct: 673  MIAMKMEHTIKAPKDGRIKKVFFSEGAQANRHAPLVEFE 711

>sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial precursor
            (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha
            subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
            alpha subunit)
          Length = 731

 Score =  154 bits (388), Expect = 7e-37
 Identities = 120/423 (28%), Positives = 198/423 (46%), Gaps = 29/423 (6%)
 Frame = +1

Query: 4    SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
            + R QVEHP++E+I G D+V   I V  G  L L QS + ++G A E R+YAE+  K F 
Sbjct: 322  NTRLQVEHPVTEMIVGQDLVEWQILVANGEALPLSQSQVPLSGHAFEARIYAENVQKGF- 380

Query: 184  LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            LP+ G L  Y  P+    VR ++G++EG ++S++YDPMI KLV +GENR  AL  +  +L
Sbjct: 381  LPATGVLHHYHVPVSSA-VRVETGVKEGDKVSMHYDPMIAKLVVWGENRAAALVKLKDSL 439

Query: 364  DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGF--KGKQLSPKETGLLEAM 537
              + + G+  N+  L+ +     F  GN+ T+++     D F      +S KE      +
Sbjct: 440  SKFQVAGLPTNVNFLQKLANHRAFAIGNVETHFIDNYKEDLFVDANNSVSVKEAYEAARL 499

Query: 538  SAVVFVKNEIRNKTFLKRDRTSIGQNPESFRGDL----SHPE-------------EWNLS 666
            +A +     I  + F+      + +NP      L    S P              EW+  
Sbjct: 500  NASLVAACLIEKEHFI------LARNPPGGSSLLPIWYSSPPFRIHHQAKRRMELEWDNE 553

Query: 667  ISHGLDSKDKTQNLHVTVSDDRSVFHVAFENG------HSFEIKNNFHLADKIIVQNIDN 828
               G     K   L +T   D        +NG       S  +K+N+   +   V N   
Sbjct: 554  YGSG---SSKIMKLTITYQPDGRYLIETEQNGSPVLEVKSTYVKDNYFRVEAAGVIN--- 607

Query: 829  EEIILQLMNRNYSGYVTFQYMGTKYRLKVESILGHSLTKFMLPKKVIDTSS----VIIAP 996
             ++ + + +++   ++        +  + +  L  S  +    K  ++TS+     ++AP
Sbjct: 608  -DVNVAVYSKDQIRHIHIWQGSCHHYFREKLGLELSEDEESQHKPKVETSANPQGTVVAP 666

Query: 997  MPGLVKSVAVKVGQRVSEGQELCVLEAMKMQNSMVAAKTGVIKSIHFQAGQTVSDDDVII 1176
            M GLV  V V+   RV EGQ + VLEAMKM++ + A  +G +  +    G+ VSD  V+ 
Sbjct: 667  MAGLVVKVLVENKTRVEEGQPVLVLEAMKMEHVVKAPSSGYVHGLQLMVGEQVSDGSVLF 726

Query: 1177 ELE 1185
             ++
Sbjct: 727  SVK 729

>sp|Q58626|PYCA_METJA Pyruvate carboxylase subunit A (Pyruvic carboxylase A)
          Length = 501

 Score =  147 bits (372), Expect = 5e-35
 Identities = 80/188 (42%), Positives = 117/188 (62%), Gaps = 1/188 (0%)
 Frame = +1

Query: 4   SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
           + R QVEH ++E +TG+D+V  MI++  G  L LKQ D+ + G A+ECR+ AEDP   F 
Sbjct: 289 NTRIQVEHTVTEQVTGIDLVKAMIKIAAGEELTLKQEDVKIRGHAIECRINAEDPLNDF- 347

Query: 184 LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
           +P  G++  Y+ P   P VR DSG+  G+EI  YYD MI KL+TYG +R+ A+A M +AL
Sbjct: 348 VPCPGKIKLYRSPGG-PGVRIDSGVYGGAEIPPYYDSMIAKLITYGNSREEAIARMKRAL 406

Query: 364 DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPE-VYPDGFKGKQLSPKETGLLEAMS 540
             YVI GV  NIP  R ++ E  F+ GNI+T+Y+ + ++    K  + + +   L   +S
Sbjct: 407 REYVIIGVKTNIPFHRAVLEEENFLKGNISTHYVEQNMHKLREKMVKYALESRDLYSVVS 466

Query: 541 AVVFVKNE 564
             VF KN+
Sbjct: 467 EKVFEKNK 474

>sp|P49787|ACCC_BACSU Biotin carboxylase (A subunit of acetyl-CoA carboxylase) (ACC)
          Length = 450

 Score =  134 bits (336), Expect = 8e-31
 Identities = 67/154 (43%), Positives = 94/154 (61%)
 Frame = +1

Query: 4   SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
           + R QVEHP++E++TG D++ + I+V  G  L LKQ D+   GWA+ECR+ AE+P K+F 
Sbjct: 291 NTRIQVEHPVTEMVTGTDLIKEQIKVASGMELSLKQEDVEFEGWAIECRINAENPSKNF- 349

Query: 184 LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
           +PS G +  Y  P  +  VR DS    G  I  YYD MI K++TYG+ RD A+A M +AL
Sbjct: 350 MPSPGEIKMYLPPGGL-GVRVDSAAYPGYSIPPYYDSMIAKVITYGKTRDEAIARMKRAL 408

Query: 364 DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYL 465
             +VI G+   IP    ++    FVSG   T +L
Sbjct: 409 SEFVIEGIETTIPFHLKLLEHETFVSGEFNTKFL 442

>sp|Q42523|MCCA_ARATH Methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial
           precursor (3-Methylcrotonyl-CoA carboxylase 1) (MCCase
           alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide
           ligase alpha subunit)
          Length = 734

 Score =  129 bits (323), Expect = 2e-29
 Identities = 65/162 (40%), Positives = 99/162 (61%)
 Frame = +1

Query: 4   SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
           + R QVEHP++E+I G D+V   IRV  G PL L QS++ ++G A E R+YAE+  K F 
Sbjct: 327 NTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPLSQSEVPMSGHAFEARIYAENVPKGF- 385

Query: 184 LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
           LP+ G L  Y+     P+VR ++G+++G  +S++YDPMI KLV +G NR  AL  +   L
Sbjct: 386 LPATGVLNHYRPVAVSPSVRVETGVEQGDTVSMHYDPMIAKLVVWGGNRGEALVKLKDCL 445

Query: 364 DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPEVYPDGF 489
            ++ + GV  NI  L+ + +   F  GN+ T+++     D F
Sbjct: 446 SNFQVAGVPTNINFLQKLASHKEFAVGNVETHFIEHHKSDLF 487

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = +1

Query: 985  IIAPMPGLVKSVAVKVGQRVSEGQELCVLEAMKMQNSMVAAKTGVIKSIHFQAGQTVSDD 1164
            I+APM GLV  V V+   +V +GQ + VLEAMKM++ + A  +G I+ +  +AGQ VSD 
Sbjct: 667  IVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSSGSIQDLKVKAGQQVSDG 726

Query: 1165 DVIIELE 1185
              +  ++
Sbjct: 727  SALFRIK 733

>sp|O30019|PYCA_ARCFU Pyruvate carboxylase subunit A (Pyruvic carboxylase A)
          Length = 506

 Score =  129 bits (323), Expect = 2e-29
 Identities = 69/156 (44%), Positives = 95/156 (60%)
 Frame = +1

Query: 4   SARGQVEHPISELITGVDIVHQMIRVGKGHPLLLKQSDISVNGWAVECRVYAEDPYKSFG 183
           ++R QVEH I+E++TG+DIV   IR+  G  L   Q D+++ G A+ECR+ AEDP   + 
Sbjct: 288 NSRLQVEHTITEVVTGIDIVKYQIRIAYGEELRHGQEDVAIRGHAIECRINAEDPVNFY- 346

Query: 184 LPSVGRLTSYKEPLHIPNVRCDSGIQEGSEISIYYDPMICKLVTYGENRDYALATMVKAL 363
            P  GR+  Y+ P  I  +R DSGI  G  I   YD MI KL+ YGE R+ A+A M +AL
Sbjct: 347 -PRSGRILHYRSPGGI-GIRVDSGIHMGYRIPEEYDSMISKLIAYGETREEAIARMKRAL 404

Query: 364 DSYVIRGVTHNIPLLRDIVTEPRFVSGNITTNYLPE 471
             Y+I GV  NIP    ++ +  FV GNI T ++ E
Sbjct: 405 YEYIIEGVETNIPFHFAVLNDEEFVRGNIHTKFVEE 440

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,513,082
Number of Sequences: 369166
Number of extensions: 3059246
Number of successful extensions: 7060
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7008
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15512822320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_004_H23
2. Dr_sW_014_D08
3. Dr_sW_023_M24