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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00127
         (2044 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10580|SWAP_CAEEL  SWAP protein (Suppressor of white apri...    82   5e-15
sp|Q12872|SFRS8_HUMAN  Splicing factor, arginine/serine-rich...    77   2e-13
sp|P12297|SUWA_DROME  Suppressor of white apricot protein          76   3e-13
sp|Q8K4Z5|SF3A1_MOUSE  Splicing factor 3 subunit 1 (SF3a120)       52   9e-06
sp|Q15459|SF3A1_HUMAN  Splicing factor 3 subunit 1 (Spliceos...    51   1e-05
sp|Q8CFC7|SFR16_MOUSE  Splicing factor, arginine/serine-rich...    47   3e-04
sp|Q8N2M8|SFR16_HUMAN  Splicing factor, arginine/serine-rich...    47   3e-04
sp|Q68FU8|SF04_RAT  Splicing factor 4                              40   0.034
sp|Q8CH02|SF04_MOUSE  Splicing factor 4                            39   0.057
sp|Q8IWZ8|SF04_HUMAN  Splicing factor 4 (RNA-binding protein...    39   0.057

>sp|Q10580|SWAP_CAEEL SWAP protein (Suppressor of white apricot protein homolog)
          Length = 749

 Score = 82.4 bits (202), Expect = 5e-15
 Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
 Frame = +3

Query: 435 IDLQSACESPGNEDEYNSKRYDQSRYSAIHFDYDNNQEKNESQESKYEKEVEDNGTDAAY 614
           +D+    +    ++E   +R DQ   +AI FDY   + K    +S+          D  +
Sbjct: 96  LDMYKDIQREQEKEEEEKRRNDQR--NAIGFDYGTGKVKARESDSE----------DEPF 143

Query: 615 LCPPNLKLLPGMITPATEREAAIIEQTAKFVADKGPQLEILIKAKQSNN-PKFVFLNFDH 791
             P  +K   G+  P+  +   IIE+TA F+   G Q+EI+IKAKQ NN  +F FL FDH
Sbjct: 144 EPPEGIKFPVGLELPSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDH 203

Query: 792 KLYPFYRHVTQLIKTAQYIP 851
           +L PFY+++ +LI+  +YIP
Sbjct: 204 RLNPFYKYLQKLIREKKYIP 223

 Score = 38.5 bits (88), Expect = 0.075
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +3

Query: 9   TLFQDDIKSKEINRGALLVPYNGDKSIMIDRFDCRGHLND----LQSHGGPFNELQLSHE 176
           T+F +D +S+ I      VP  GD    +DR+DCR  L      ++ +G P  +      
Sbjct: 26  TIFPNDYQSEHIAEERHTVPCLGDPENRVDRYDCRLLLPSIDVAIKRNGSPSEQCPTEAM 85

Query: 177 EWEVEQSCNFERYNDLY 227
           E   E  C  ERY D+Y
Sbjct: 86  E---EDMCEEERYLDMY 99

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
 Frame = +3

Query: 549  KNESQESKYEKEVEDNGTDAAYL----------CPPNLKLLPGMITPATEREAAIIEQTA 698
            K   +E+K EKE  D+  D  Y           CP    + P  + PAT     I+   A
Sbjct: 341  KMNVEEAKKEKE-NDHLDDPEYREWYENFYGRPCP---WIGPRPMIPATPDLEPILNSYA 396

Query: 699  KFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLYPFYRHVTQLIKTAQYIPGKRHISHLV 878
            + VA +G + E  + A++  + +  F+      Y +Y H  ++ +   Y P ++++S LV
Sbjct: 397  EHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKVRMHQWRMYQPIEQNLSPLV 454

Query: 879  ESNGDQSQMGSFPQPVAPKIDISSTPYGKLIERFKQSQEKKKLD 1010
             ++       S P P +      STP   L  R    Q ++ LD
Sbjct: 455  LNSPAPPSAVSSPGPSSLMSLNLSTPEPPLNRR----QRRRLLD 494

>sp|Q12872|SFRS8_HUMAN Splicing factor, arginine/serine-rich 8 (Suppressor of white
           apricot protein homolog)
          Length = 951

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 15/145 (10%)
 Frame = +3

Query: 456 ESPGNEDEYNSKRYDQS-----RYSAIHF----DYDNNQEKNESQESKYEKE------VE 590
           E    E+EY  KR+ ++      Y+A+ F    DY +  E  E +E   ++E      +E
Sbjct: 125 EEARQEEEY--KRFSEALAEDGSYNAVGFTYGSDYYDPSEPTEEEEPSKQREKNEAENLE 182

Query: 591 DNGTDAAYLCPPNLKLLPGMITPATEREAAIIEQTAKFVADKGPQLEILIKAKQSNNPKF 770
           +N  +  ++ P  L +   +  P T +  AIIE+TA FV  +G Q EI++KAKQ+ N +F
Sbjct: 183 EN--EEPFVAPLGLSVPSDVELPPTAKMHAIIERTASFVCRQGAQFEIMLKAKQAPNSQF 240

Query: 771 VFLNFDHKLYPFYRHVTQLIKTAQY 845
            FL FDH L P+Y+ + + +K  +Y
Sbjct: 241 DFLRFDHYLNPYYKFIQKAMKEGRY 265

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
 Frame = +3

Query: 3   SCTLFQDDIKSKEINRGALLVPYNGDKSIMIDRFDCRGHLNDLQSHGGPFN----ELQLS 170
           +C LF+DD +++   +G  L+P+ GD  I+IDR+D RGHL+DL  +   ++    + QLS
Sbjct: 41  ACKLFRDDERAQAQEQGQHLIPWMGDHKILIDRYDGRGHLHDLSEYDAEYSTWNRDYQLS 100

Query: 171 HEEWEVEQSCNFERYNDLY 227
            EE  +E  C+ ERY  L+
Sbjct: 101 EEEARIEALCDEERYLALH 119

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 25/65 (38%), Positives = 39/65 (60%)
 Frame = +3

Query: 1374 VIGKMAEYVARNGVEFEQMMLARNSERFAFLLPGHASHCRYKILLDKELNKQQQQTIGRS 1553
            VI K+AEYVARNG++FE  + A+N +RF FL P +  +  Y+      L K+   ++   
Sbjct: 459  VIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWYQYNAYYEFKKQFFLQKEGGDSMQAV 518

Query: 1554 QSPEQ 1568
             +PE+
Sbjct: 519  SAPEE 523

>sp|P12297|SUWA_DROME Suppressor of white apricot protein
          Length = 963

 Score = 76.3 bits (186), Expect = 3e-13
 Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
 Frame = +3

Query: 510 YSAIHFDYDNNQEKNES--QESKYEKEVEDNGTDAA--YLCPPNLKLLP--GMITPATER 671
           +S + F YD     + S    S    ++  N  ++   ++ P  L + P   M  P T +
Sbjct: 171 FSQVGFQYDGQSAASTSIGGSSTATSQLSPNSEESELPFVLPYTLMMAPPLDMQLPETMK 230

Query: 672 EAAIIEQTAKFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLYPFYRHVTQLIKTAQYIP 851
           + AIIE+TA+F+A +G Q+EILIKAKQ+NN +F FL     L P+YRH+   IK A++ P
Sbjct: 231 QHAIIEKTARFIATQGAQMEILIKAKQANNTQFDFLTQGGHLQPYYRHLLAAIKAAKFPP 290

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
 Frame = +3

Query: 3   SCTLFQDDIKSKEINRGALLVPYNGDKSIMIDRFDCRGHLNDLQSH----GGPFNELQ-L 167
           +C +F+DD K++E++ G  L+P+ GD ++ IDR+D RG L +L  H    GG  N L+ L
Sbjct: 66  ACKIFRDDEKAREMDHGKQLIPWMGDVNLKIDRYDVRGALCELAPHEAPPGGYGNRLEYL 125

Query: 168 SHEEWEVEQSCNFERYNDLYHTND 239
           S EE   EQ C  ERY  LY+  +
Sbjct: 126 SAEEQRAEQLCEEERYLFLYNNEE 149

 Score = 41.2 bits (95), Expect = 0.012
 Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
 Frame = +3

Query: 1356 EESQDAVIGKMAEYVARNGVEFEQMMLARNSERFAFLLPG--HASHCRYKILLDKELNKQ 1529
            ++S   +I K A YV +NG +FE+ +  ++ +RF+FLLP   +  +  YK+  D +   +
Sbjct: 477  KDSLRHIIDKTATYVIKNGRQFEETLRTKSVDRFSFLLPANEYYPYYLYKVTGDVDAASK 536

Query: 1530 QQQTIGRSQSPEQCIASIVDSYG-----QSPPHQSSGPISFKVTSK------LRTVPVRS 1676
            +++T   +      ++    S+G      S  +    P+SF + ++        T+P  +
Sbjct: 537  EEKTRKAAAVAAALMSKKGLSFGGAAAAVSGSNLDKAPVSFSIRARDDQCPLQHTLPQEA 596

Query: 1677 SN--YVDTIAQIEXXXXXXXXXXNLQVKSEITNSSSRTT-KNGRIS-------------- 1805
            S+       A +E             +K   T   +RT  + G I+              
Sbjct: 597  SDEETSSNAAGVEHVRPGMPDSVQRAIKQVETQLLARTAGQKGNITASPSCSSPQKEQRQ 656

Query: 1806 -------RFSPANPKNLMVLATFKNDLQIQRKRKAAEFL 1901
                   + +    + L  + + +  LQ++RKRKA  FL
Sbjct: 657  AEERVKDKLAQIAREKLNGMISREKQLQLERKRKALAFL 695

>sp|Q8K4Z5|SF3A1_MOUSE Splicing factor 3 subunit 1 (SF3a120)
          Length = 791

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 33/106 (31%), Positives = 51/106 (48%)
 Frame = +3

Query: 621 PPNLKLLPGMITPATEREAAIIEQTAKFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLY 800
           P   K + G+I P  E    I+++TA FVA  GP+ E  I+  + NNPKF FLN +   +
Sbjct: 33  PTPSKPVVGIIYPPPEVRN-IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYH 91

Query: 801 PFYRHVTQLIKTAQYIPGKRHISHLVESNGDQSQMGSFPQPVAPKI 938
            +YRH     K  +       I  +++    Q+     PQ V  ++
Sbjct: 92  AYYRHKVSEFKEGKAQEPSAAIPKVMQQQ-QQATQQQLPQKVQAQV 136

 Score = 38.9 bits (89), Expect = 0.057
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +3

Query: 1374 VIGKMAEYVARNGVEFEQMMLAR--NSERFAFLLPGHASHCRYKILLDKELNKQQQQTIG 1547
            ++ K A +VARNG EFE  +     N+ +F FL P    H  Y+       +K  +   G
Sbjct: 52   IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYR-------HKVSEFKEG 104

Query: 1548 RSQSPEQCIASIVDSYGQSPPHQ 1616
            ++Q P   I  ++    Q+   Q
Sbjct: 105  KAQEPSAAIPKVMQQQQQATQQQ 127

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +3

Query: 681  IIEQTAKFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLYPFYRHVTQLIK--TAQYIPG 854
            +++ TA+FVA  G Q    +  K+  N +F FL   H L+ ++   T+L++  T   IP 
Sbjct: 166  VVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYF---TKLVEQYTKILIPP 222

Query: 855  KRHISHLVESNGDQSQMGSFPQPVAPKIDISSTPYGKLIERFKQSQEKKK 1004
            K   S L        +    P+ V  ++      + K  ER ++ +E++K
Sbjct: 223  KGLFSKL-------KKEAENpreVLDQV-CYRVEWAKFQERERKKEEEEK 264

>sp|Q15459|SF3A1_HUMAN Splicing factor 3 subunit 1 (Spliceosome associated protein 114)
           (SAP 114) (SF3a120)
          Length = 793

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +3

Query: 633 KLLPGMITPATEREAAIIEQTAKFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLYPFYR 812
           K + G+I P  E    I+++TA FVA  GP+ E  I+  + NNPKF FLN +   + +YR
Sbjct: 37  KPVVGIIYPPPEVRN-IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYR 95

Query: 813 HVTQLIKTAQYIPGKRHISHLVESNGDQSQMGSFPQPVAPKI 938
           H     K  +       I  +++    Q+     PQ V  ++
Sbjct: 96  HKVSEFKEGKAQEPSAAIPKVMQQQ-QQTTQQQLPQKVQAQV 136

 Score = 38.9 bits (89), Expect = 0.057
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +3

Query: 1374 VIGKMAEYVARNGVEFEQMMLAR--NSERFAFLLPGHASHCRYKILLDKELNKQQQQTIG 1547
            ++ K A +VARNG EFE  +     N+ +F FL P    H  Y+       +K  +   G
Sbjct: 52   IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYR-------HKVSEFKEG 104

Query: 1548 RSQSPEQCIASIVDSYGQSPPHQ 1616
            ++Q P   I  ++    Q+   Q
Sbjct: 105  KAQEPSAAIPKVMQQQQQTTQQQ 127

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +3

Query: 681  IIEQTAKFVADKGPQLEILIKAKQSNNPKFVFLNFDHKLYPFYRHVTQLIK--TAQYIPG 854
            +++ TA+FVA  G Q    +  K+  N +F FL   H L+ ++   T+L++  T   IP 
Sbjct: 166  VVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYF---TKLVEQYTKILIPP 222

Query: 855  KRHISHLVESNGDQSQMGSFPQPVAPKIDISSTPYGKLIERFKQSQEKKK 1004
            K   S L        +    P+ V  ++      + K  ER ++ +E++K
Sbjct: 223  KGLFSKL-------KKEAENpreVLDQV-CYRVEWAKFQERERKKEEEEK 264

>sp|Q8CFC7|SFR16_MOUSE Splicing factor, arginine/serine-rich 16 (Suppressor of
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 25/82 (30%), Positives = 41/82 (50%)
 Frame = +3

Query: 3   SCTLFQDDIKSKEINRGALLVPYNGDKSIMIDRFDCRGHLNDLQSHGGPFNELQLSHEEW 182
           +C +  D   +        ++P+ GD + MIDRFD R HL+ +  +  P     +S E+ 
Sbjct: 32  ACKVHLDSAVALAAESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPL-LTTISPEQE 90

Query: 183 EVEQSCNFERYNDLYHTNDSDI 248
             E+ CN+ERY  L   + + I
Sbjct: 91  SDERKCNYERYRGLVQNDFAGI 112

>sp|Q8N2M8|SFR16_HUMAN Splicing factor, arginine/serine-rich 16 (Suppressor of
           white-apricot homolog 2)
          Length = 659

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 25/82 (30%), Positives = 41/82 (50%)
 Frame = +3

Query: 3   SCTLFQDDIKSKEINRGALLVPYNGDKSIMIDRFDCRGHLNDLQSHGGPFNELQLSHEEW 182
           +C +  D   +        ++P+ GD + MIDRFD R HL+ +  +  P     +S E+ 
Sbjct: 32  ACKVHLDSAVALAAESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPL-LTTISPEQE 90

Query: 183 EVEQSCNFERYNDLYHTNDSDI 248
             E+ CN+ERY  L   + + I
Sbjct: 91  SDERKCNYERYRGLVQNDFAGI 112

>sp|Q68FU8|SF04_RAT Splicing factor 4
          Length = 644

 Score = 39.7 bits (91), Expect = 0.034
 Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 18/161 (11%)
 Frame = +3

Query: 528 DYDNN------QEKNESQESKYEKEVEDNGTDAAYLCPPNLKLLPGMITPATEREAAIIE 689
           DY +N       +KN  +   Y K+V +   +A        K+ P    P  E    + E
Sbjct: 210 DYKDNPAFTFLHDKNSREFLYYRKKVAEIRKEAQKPQAATQKVSP----PEDEEAKNLAE 265

Query: 690 QTAKFVADKGPQLEILIKAKQSNNPKFVFL-NFDHKLYPFYRHVTQLIKTAQY------- 845
           + A+F+AD GP++E +       N  F FL + + + Y +Y+   +  + A+        
Sbjct: 266 KLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYKQKLEEFRKAKAGSTGSLP 325

Query: 846 ----IPGKRHISHLVESNGDQSQMGSFPQPVAPKIDISSTP 956
                P  R  S     +G    + + P PVAP   ++ TP
Sbjct: 326 APVPNPSLRRKSAPEALSGAVPPITACPTPVAPAPAVNPTP 366

 Score = 36.6 bits (83), Expect = 0.28
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 681 IIEQTAKFVADKGPQLEILIKAKQSNNPKFVFL-NFDHKLYPFYR-HVTQLIKTAQ 842
           +IE+ A+FVA+ GP+LE +      +NP F FL + + + + +YR  V ++ K AQ
Sbjct: 188 VIEKLARFVAEGGPELEKVAMEDYKDNPAFTFLHDKNSREFLYYRKKVAEIRKEAQ 243

>sp|Q8CH02|SF04_MOUSE Splicing factor 4
          Length = 643

 Score = 38.9 bits (89), Expect = 0.057
 Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
 Frame = +3

Query: 528 DYDNN------QEKNESQESKYEKEVEDNGTDAAYLCPPNLKLLPGMITPATEREAAIIE 689
           DY +N       +KN  +   Y ++V +   +A        K+ P    P  E    + E
Sbjct: 209 DYKDNPAFTFLHDKNSREFLYYRRKVAEIRKEAQKPQAATQKVSP----PEDEEAKNLAE 264

Query: 690 QTAKFVADKGPQLEILIKAKQSNNPKFVFL-NFDHKLYPFYRHVTQLIKTAQY------- 845
           + A+F+AD GP++E +       N  F FL + + + Y +YR      + A+        
Sbjct: 265 KLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYRQKLDEFRKAKAGSTGSFP 324

Query: 846 ----IPGKRHISHLVESNGDQSQMGSFPQPVAPKIDISSTP 956
                P  R  S     +G    + + P PVAP   ++ TP
Sbjct: 325 APAPNPSLRRKSAPEALSGAVPPITACPTPVAPAPAVNPTP 365

 Score = 38.5 bits (88), Expect = 0.075
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +3

Query: 543 QEKNESQESKYEKEVEDNGTDAAYLCPPNLKLLPGMITPATEREAAIIEQTAKFVADKGP 722
           Q  ++ +E  YE+ +E             +K+ P    P       +IE+ A+FVA+ GP
Sbjct: 158 QSPDDDEEEDYEQWLE-------------IKVSP----PEGAETRRVIEKLARFVAEGGP 200

Query: 723 QLEILIKAKQSNNPKFVFL---NFDHKLYPFYRHVTQLIKTAQ 842
           +LE +      +NP F FL   N    LY + R V ++ K AQ
Sbjct: 201 ELEKVAMEDYKDNPAFTFLHDKNSREFLY-YRRKVAEIRKEAQ 242

>sp|Q8IWZ8|SF04_HUMAN Splicing factor 4 (RNA-binding protein RBP)
          Length = 645

 Score = 38.9 bits (89), Expect = 0.057
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +3

Query: 543 QEKNESQESKYEKEVEDNGTDAAYLCPPNLKLLPGMITPATEREAAIIEQTAKFVADKGP 722
           Q  +E +E  YE+ +E             +K+ P    P       +IE+ A+FVA+ GP
Sbjct: 162 QSPDEDEEEDYEQWLE-------------IKVSP----PEGAETRKVIEKLARFVAEGGP 204

Query: 723 QLEILIKAKQSNNPKFVFL-NFDHKLYPFYR-HVTQLIKTAQ 842
           +LE +      +NP F FL + + + + +YR  V ++ K AQ
Sbjct: 205 ELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQ 246

 Score = 37.4 bits (85), Expect = 0.17
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
 Frame = +3

Query: 528 DYDNN------QEKNESQESKYEKEVEDNGTDAAYLCPPNLKLLPGMITPATEREAAIIE 689
           DY +N       +KN  +   Y K+V +   +A      + K+ P    P  E    + E
Sbjct: 213 DYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAASQKVSP----PEDEEVKNLAE 268

Query: 690 QTAKFVADKGPQLEILIKAKQSNNPKFVFL-NFDHKLYPFYRHVTQLIKTAQ 842
           + A+F+AD GP++E +       N  F FL   + + Y +YR   +  + A+
Sbjct: 269 KLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 320

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,708,435
Number of Sequences: 369166
Number of extensions: 4207611
Number of successful extensions: 11417
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11404
length of database: 68,354,980
effective HSP length: 117
effective length of database: 46,740,985
effective search space used: 26315174555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_004_D14
2. Dr_sW_027_P07
3. Dr_sW_008_C11
4. Dr_sW_006_L03