Planaria EST Database

DrC_00116

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00116
         (1574 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27615|SCRB2_RAT  Lysosome membrane protein II (LIMP II) ...   334   5e-91
sp|O35114|SCRB2_MOUSE  Lysosome membrane protein II (LIMP II...   325   2e-88
sp|Q14108|SCRB2_HUMAN  Lysosome membrane protein II (LIMP II...   323   1e-87
sp|P97943|SCRB1_RAT  Scavenger receptor class B member 1 (SR...   293   7e-79
sp|Q61009|SCRB1_MOUSE  Scavenger receptor class B member 1 (...   289   1e-77
sp|Q60417|SCRB1_CRIGR  Scavenger receptor class B member 1 (...   288   3e-77
sp|Q8WTV0|SCRB1_HUMAN  Scavenger receptor class B member 1 (...   277   7e-74
sp|Q8SQC1|SCRB1_PIG  Scavenger receptor class B member 1 (SR...   275   3e-73
sp|O18824|SCRB1_BOVIN  Scavenger receptor class B member 1 (...   269   1e-71
sp|P16671|CD36_HUMAN  Platelet glycoprotein IV (GPIV) (Glyco...   265   4e-70

>sp|P27615|SCRB2_RAT Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
            member 2) (85 kDa lysosomal membrane sialoglycoprotein)
            (LGP85) (CD36 antigen-like 2)
          Length = 478

 Score =  334 bits (856), Expect = 5e-91
 Identities = 174/445 (39%), Positives = 271/445 (60%), Gaps = 9/445 (2%)
 Frame = +3

Query: 57   CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
            C      +  ++LV  +T+    +    V + I K + L+NG+ +++ W+   LP YIQF
Sbjct: 5    CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFDSWEKPPLPVYIQF 64

Query: 231  WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGS-VSYLQKRLFYFDRSRS 407
            +FF+V NP EIL G  P L ++GPYTYRE R+K +++F +NG+ +S +  + + F+R++S
Sbjct: 65   YFFNVTNPEEILQGEIPLLEEVGPYTYRELRNKANVQFGENGTTISAVTNKAYIFERNQS 124

Query: 408  VGDDS-DTFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYE 584
            VGD + D   T+NIP++ + +  +  +  L+EI+  +++ ++   LF+  +V  + WGY+
Sbjct: 125  VGDPTVDLIRTINIPLLTVVEMAQQPF--LREIIEAMLKAYQQT-LFVTHTVHELLWGYK 181

Query: 585  DPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGS 755
            D       E+   +HI+   V PN GLFY +N TND  Y+  +G  N  N+ KI  WNG 
Sbjct: 182  D-------EVLSLVHIFRPDVSPNFGLFYERNGTNDGEYVFLTGEDNYLNFTKIVEWNGK 234

Query: 756  NHISMWNDKYANMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMN 935
              +  W     NMINGTDG  F P +++   LYIF SD CRS+Y T+   E ++G+P+  
Sbjct: 235  TSLDWWTTDTCNMINGTDGDSFHPLISKDETLYIFPSDFCRSVYITFSSFENVEGLPAFR 294

Query: 936  YAAPDSVFANHSVNPDNEGFCL-DGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYI 1112
            Y  P  + AN S   +N GFC+ +G+CM AGVLN+S C   GAPIIMS PHFY A EK++
Sbjct: 295  YKVPAEILANSS---ENAGFCIPEGNCMDAGVLNVSIC-KNGAPIIMSFPHFYQADEKFV 350

Query: 1113 DAVYGINPS-SEFKTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMW 1289
             A+ G+ P+  E ++ + + P TG+ L+ AK+ QIN  +K + DF +  NI ++V P+M+
Sbjct: 351  SAIKGMRPNKEEHESFVDINPLTGIILRGAKRFQINTYVKKLDDFVETGNIRTMVFPVMY 410

Query: 1290 LNESVLISDALAGTIRSTLVLPVLV 1364
            LNESVLI    A  ++S +   ++V
Sbjct: 411  LNESVLIDKETASQLKSVINTTLIV 435

>sp|O35114|SCRB2_MOUSE Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
            member 2) (85 kDa lysosomal membrane sialoglycoprotein)
            (LGP85)
          Length = 478

 Score =  325 bits (833), Expect = 2e-88
 Identities = 171/445 (38%), Positives = 271/445 (60%), Gaps = 9/445 (2%)
 Frame = +3

Query: 57   CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
            C      +  ++LV  +T+    +    V + I K + L+NG+ ++  W+   LP YIQF
Sbjct: 5    CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFNSWEKPPLPVYIQF 64

Query: 231  WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGS-VSYLQKRLFYFDRSRS 407
            +FF+V NP EIL G  P L ++GPYTYRE R+K +I+F +NG+ +S +  + + F+R++S
Sbjct: 65   YFFNVTNPEEILQGEIPLLEEVGPYTYRELRNKANIQFGENGTTISAVTNKAYVFERNQS 124

Query: 408  VGDDS-DTFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYE 584
            VGD + D   T+NIP++ + D    Q   L+E++  +++ ++   LF+  +V  + WGY+
Sbjct: 125  VGDPNVDLIRTINIPLLTVVDLA--QLTLLRELIEAMLKAYQQK-LFVIHTVHELLWGYK 181

Query: 585  DPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGS 755
            D       E+   +HI+   V PN GLFY +N TND  Y+  +G  N  N+ KI  WNG 
Sbjct: 182  D-------EILSLVHIFKPDVSPNFGLFYERNGTNDGEYVFLTGEDNYLNFSKIVEWNGK 234

Query: 756  NHISMWNDKYANMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMN 935
              +  W     NMINGTDG  F P +++   LY+F SD+CRS++ T+   E ++G+P+  
Sbjct: 235  TSLDWWTTDTCNMINGTDGDSFHPLISKDEVLYLFPSDLCRSVHITFSSFENVEGLPAFR 294

Query: 936  YAAPDSVFANHSVNPDNEGFCL-DGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYI 1112
            Y  P  + AN S   +N GFC+ +G+CM +GVLN+S C   GAPIIMS PHFY A EK++
Sbjct: 295  YKVPAEILANTS---ENAGFCIPEGNCMDSGVLNISIC-KNGAPIIMSFPHFYQADEKFV 350

Query: 1113 DAVYGINPS-SEFKTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMW 1289
             A+ G++P+  E ++ + + P TG+ L+ AK+ QIN  ++ + DF +  +I ++V P+M+
Sbjct: 351  SAIKGMHPNKEEHESFVDINPLTGIILRGAKRFQINTYVRKLDDFVETGDIRTMVFPVMY 410

Query: 1290 LNESVLISDALAGTIRSTLVLPVLV 1364
            LNESVLI    A  ++S +   ++V
Sbjct: 411  LNESVLIDKETANQLKSVINTTLVV 435

>sp|Q14108|SCRB2_HUMAN Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
            member 2) (85 kDa lysosomal membrane sialoglycoprotein)
            (LGP85) (CD36 antigen-like 2)
          Length = 478

 Score =  323 bits (827), Expect = 1e-87
 Identities = 170/445 (38%), Positives = 267/445 (60%), Gaps = 9/445 (2%)
 Frame = +3

Query: 57   CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
            C      +  ++LV  +T+    +    V + I K + L+NG+  ++ W+   LP Y QF
Sbjct: 5    CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQF 64

Query: 231  WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGS-VSYLQKRLFYFDRSRS 407
            +FF+V NP EIL G  P + ++GPYTYRE R+K +I+F DNG+ +S +  + + F+R +S
Sbjct: 65   YFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQS 124

Query: 408  VGDDS-DTFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYE 584
            VGD   D   T+NIPV+ + +  +  +  L+EI+  +++ ++   LF+  +V  + WGY+
Sbjct: 125  VGDPKIDLIRTLNIPVLTVIEWSQVHF--LREIIEAMLKAYQQK-LFVTHTVDELLWGYK 181

Query: 585  DPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGS 755
            D       E+   IH++   + P  GLFY KN TND  Y+  +G  +  N+ KI  WNG 
Sbjct: 182  D-------EILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGK 234

Query: 756  NHISMWNDKYANMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMN 935
              +  W     NMINGTDG  F P + +   LY+F SD CRS+Y T+   E ++G+P+  
Sbjct: 235  TSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFR 294

Query: 936  YAAPDSVFANHSVNPDNEGFCL-DGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYI 1112
            Y  P  + AN S   DN GFC+ +G+C+G+GVLN+S C   GAPIIMS PHFY A E+++
Sbjct: 295  YKVPAEILANTS---DNAGFCIPEGNCLGSGVLNVSIC-KNGAPIIMSFPHFYQADERFV 350

Query: 1113 DAVYGINPSSE-FKTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMW 1289
             A+ G++P+ E  +T + + P TG+ L+ AK+ QINI +K + DF +  +I ++V P+M+
Sbjct: 351  SAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMY 410

Query: 1290 LNESVLISDALAGTIRSTLVLPVLV 1364
            LNESV I    A  ++S +   +++
Sbjct: 411  LNESVHIDKETASRLKSMINTTLII 435

>sp|P97943|SCRB1_RAT Scavenger receptor class B member 1 (SRB1) (SR-BI)
          Length = 509

 Score =  293 bits (751), Expect = 7e-79
 Identities = 155/429 (36%), Positives = 243/429 (56%), Gaps = 3/429 (0%)
 Frame = +3

Query: 75   IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
            ++G +    G+ +  ++P ++ +Q+ K + +   SL +  W+   +P Y+  +FF+V+NP
Sbjct: 16   VLGLLCAALGVIMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNP 75

Query: 255  SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
            SE+L G KP +R+ GPY YRE+R K +I F DN +VSY++ R   F   RS G +SD   
Sbjct: 76   SEVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSYIENRSLRFQPDRSQGSESDYIV 135

Query: 435  TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNEL 614
              NI V+     +E++   LK ++ + +        FM  +V  I WGYEDPF+   N L
Sbjct: 136  LPNILVLGGAVMMEDKPTSLKLLMTLGLVTMGQRA-FMNRTVGEILWGYEDPFV---NFL 191

Query: 615  SKFIH--IYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYA 788
            SK+      +    GLF G N+++  V+   +G  N      +++WNG + ++ W+ +  
Sbjct: 192  SKYFPDMFPIKGKFGLFVGMNDSSSGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQC 251

Query: 789  NMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANH 968
            NMINGT G M+AP++   S L  F  + CRS+  TY  S   +G+P+  + APD++FAN 
Sbjct: 252  NMINGTAGQMWAPFMTPESSLEFFSPEACRSMKLTYQESRVFEGIPTYRFTAPDTLFANG 311

Query: 969  SVNPDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPS-SE 1145
            SV P NEGFC    C  +G+ N+S C   GAP+ +SQPHFY+A     +AV G+NP   E
Sbjct: 312  SVYPPNEGFC---PCRESGIQNVSTC-RFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKE 367

Query: 1146 FKTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALA 1325
                L + P TG+P+  + K+Q+++ IK VK   +   I  VVLP++W  +S ++     
Sbjct: 368  HSLFLDIHPVTGIPMNCSVKMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQSGMMGGKTL 427

Query: 1326 GTIRSTLVL 1352
             T  + LVL
Sbjct: 428  NTFYTQLVL 436

>sp|Q61009|SCRB1_MOUSE Scavenger receptor class B member 1 (SRB1) (SR-BI)
          Length = 509

 Score =  289 bits (740), Expect = 1e-77
 Identities = 151/426 (35%), Positives = 240/426 (56%), Gaps = 1/426 (0%)
 Frame = +3

Query: 78   VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
            +G +    G+ +  ++P ++ +Q+ K + +   SL +  W+   +P Y+  +FF+V+NP+
Sbjct: 17   LGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNPN 76

Query: 258  EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
            E+L G KP +R+ GPY YRE+R K +I F DN +VS+++ R  +F   +S G +SD    
Sbjct: 77   EVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHGSESDYIVL 136

Query: 438  VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNELS 617
             NI V+     +E++   LK ++ + +        FM  +V  I WGY+DPF+  LN   
Sbjct: 137  PNILVLGGSILMESKPVSLKLMMTLALVTMGQRA-FMNRTVGEILWGYDDPFVHFLNTYL 195

Query: 618  KFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANMI 797
              + + +    GLF G NN+N  V+   +G  N      +++WNG + I  W+ +  NMI
Sbjct: 196  PDM-LPIKGKFGLFVGMNNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMI 254

Query: 798  NGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANHSVN 977
            NGT G M+AP++   S L  F  + CRS+  TY  S   +G+P+  + APD++FAN SV 
Sbjct: 255  NGTSGQMWAPFMTPESSLEFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVY 314

Query: 978  PDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPS-SEFKT 1154
            P NEGFC    C  +G+ N+S C   GAP+ +S PHFY+A     +AV G+NP+  E   
Sbjct: 315  PPNEGFC---PCRESGIQNVSTC-RFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSL 370

Query: 1155 ILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALAGTI 1334
             L + P TG+P+  + K+Q+++ IK VK   +   I  VVLP++W  +S  +      T 
Sbjct: 371  FLDIHPVTGIPMNCSVKMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQSGAMGGKPLSTF 430

Query: 1335 RSTLVL 1352
             + LVL
Sbjct: 431  YTQLVL 436

>sp|Q60417|SCRB1_CRIGR Scavenger receptor class B member 1 (SRB1) (SR-BI) (HaSR-BI)
          Length = 509

 Score =  288 bits (737), Expect = 3e-77
 Identities = 154/427 (36%), Positives = 241/427 (56%), Gaps = 1/427 (0%)
 Frame = +3

Query: 75   IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
            +VG +  V G+ +  ++P ++ +Q+ K + +   SL +  W+   +P Y+  +FF+V+NP
Sbjct: 16   VVGLLCAVLGVVMILVMPSLIKQQVLKNVRIDPSSLSFAMWKEIPVPFYLSVYFFEVVNP 75

Query: 255  SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
            SEIL G KP +R+ GPY YRE+R K +I F DN +VS+++ R  +F   RS G +SD   
Sbjct: 76   SEILKGEKPVVRERGPYVYREFRHKANITFNDNDTVSFVEHRSLHFQPDRSHGSESDYII 135

Query: 435  TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNEL 614
              NI V+     +E++   LK ++ + +        FM  +V  I WGYEDPF+  +N+ 
Sbjct: 136  LPNILVLGGAVMMESKSAGLKLMMTLGLATL-GQRAFMNRTVGEILWGYEDPFVNFINKY 194

Query: 615  SKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANM 794
               +   +    GLF   NN++  ++   +G  N      ++RWNG + ++ W+ +  NM
Sbjct: 195  LPDM-FPIKGKFGLFVEMNNSDSGLFTVFTGVQNFSKIHLVDRWNGLSKVNYWHSEQCNM 253

Query: 795  INGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANHSV 974
            INGT G M+AP++   S L  F  + CRS+  TY  S   +G+P+  + AP ++FAN SV
Sbjct: 254  INGTSGQMWAPFMTPQSSLEFFSPEACRSMKLTYHDSGVFEGIPTYRFTAPKTLFANGSV 313

Query: 975  NPDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPS-SEFK 1151
             P NEGFC    C+ +G+ N+S C   GAP+ +S PHFY+A     +AV G+NP   E  
Sbjct: 314  YPPNEGFC---PCLESGIQNVSTC-RFGAPLFLSHPHFYNADPVLSEAVLGLNPDpreHS 369

Query: 1152 TILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALAGT 1331
              L + P TG+P+  + KLQI++ IK VK   +   I  VVLP++W  +S  +      T
Sbjct: 370  LFLDIHPVTGIPMNCSVKLQISLYIKAVKGIGQTGKIEPVVLPLLWFEQSGAMGGEPLNT 429

Query: 1332 IRSTLVL 1352
              + LVL
Sbjct: 430  FYTQLVL 436

>sp|Q8WTV0|SCRB1_HUMAN Scavenger receptor class B member 1 (SRB1) (SR-BI) (CD36 antigen-like
            1) (CD36 and LIMPII analogous 1) (CLA-1) (Collagen type I
            receptor, thrombospondin receptor-like 1)
          Length = 552

 Score =  277 bits (708), Expect = 7e-74
 Identities = 150/442 (33%), Positives = 242/442 (54%), Gaps = 3/442 (0%)
 Frame = +3

Query: 75   IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
            + G +  V G  +  ++P ++ +Q+ K + +   SL +  W+   +P Y+  +FFDV+NP
Sbjct: 16   VAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDVMNP 75

Query: 255  SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
            SEIL G KP +R+ GPY YRE+R K +I F +N +VS+L+ R F F  S+S G +SD   
Sbjct: 76   SEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIV 135

Query: 435  TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYG--LFMKISVRNITWGYEDPFLKKLN 608
              NI V+     +EN+   LK I+ +    F   G   FM  +V  I WGY+DP +  +N
Sbjct: 136  MPNILVLGAAVMMENKPMTLKLIMTLA---FTTLGERAFMNRTVGEIMWGYKDPLVNLIN 192

Query: 609  ELSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYA 788
            +    +  + D   GLF   NN++  ++   +G  N+     +++WNG + +  W+    
Sbjct: 193  KYFPGMFPFKD-KFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQC 251

Query: 789  NMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANH 968
            NMINGT G M+ P++   S L  +  + CRS+   Y  S   +G+P+  + AP ++FAN 
Sbjct: 252  NMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFANG 311

Query: 969  SVNPDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPSSEF 1148
            S+ P NEGFC    C+ +G+ N+S C    AP+ +S PHF +A     +AV G++P+ E 
Sbjct: 312  SIYPPNEGFC---PCLESGIQNVSTC-RFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEA 367

Query: 1149 KTI-LKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALA 1325
             ++ L + P TG+P+  + KLQ+++ +K V    +   I  VVLP++W  ES  +     
Sbjct: 368  HSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETL 427

Query: 1326 GTIRSTLVLPVLVGKWGSVALM 1391
             T  + LVL   V  +    L+
Sbjct: 428  HTFYTQLVLMPKVMHYAQYVLL 449

>sp|Q8SQC1|SCRB1_PIG Scavenger receptor class B member 1 (SRB1) (SR-BI) (High density
            lipoprotein receptor SR-BI)
          Length = 509

 Score =  275 bits (703), Expect = 3e-73
 Identities = 148/427 (34%), Positives = 239/427 (55%), Gaps = 2/427 (0%)
 Frame = +3

Query: 78   VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
            VG ++   G  +  ++P I+ +Q+ K + +   SL +  W+   +P Y+  +FFDV+NP+
Sbjct: 17   VGLLLAALGAVMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIPVPFYLSVYFFDVINPN 76

Query: 258  EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
            EIL G KP +R+ GPY YRE+R K +I F DN +VS+L+ R + F   +S G +SD    
Sbjct: 77   EILQGQKPQVRERGPYVYREFRHKSNITFNDNDTVSFLEYRSYQFQPHKSRGLESDYIVI 136

Query: 438  VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNELS 617
             NI V+     +E++   LK I+            F+  +V  I WGYEDP +  +N+  
Sbjct: 137  PNILVLSASVMMEDRPMSLKLIMTFAFSALGERA-FVNRTVGEIMWGYEDPLIHLINKY- 194

Query: 618  KFIHIY-VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANM 794
             F +++      GLF   NN++  ++   +G  +      +++WNG + ++ W+    NM
Sbjct: 195  -FPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKDFSRIHLVDKWNGLSKVNFWHSDQCNM 253

Query: 795  INGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANHSV 974
            INGT G M+AP++   S L  +  + CRS+   Y      +G+P+  + AP+++FAN SV
Sbjct: 254  INGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFRFVAPNTLFANGSV 313

Query: 975  NPDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPSSEFKT 1154
             P NEGFC    CM +G+ N+S C    AP+ +S PHFY+A     +AV G++P++E  +
Sbjct: 314  YPPNEGFC---PCMESGIQNVSTC-RFNAPLFLSHPHFYNADPVLAEAVSGLHPNTEEHS 369

Query: 1155 I-LKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALAGT 1331
            + L + P TG+P+  + KLQ+++ IK VK   +   I  VVLP++W  ES  +      T
Sbjct: 370  LFLDIHPVTGIPMNCSVKLQLSLYIKSVKGIGQTGKIEPVVLPLLWFAESGAMEGETLQT 429

Query: 1332 IRSTLVL 1352
              + LVL
Sbjct: 430  FYTQLVL 436

>sp|O18824|SCRB1_BOVIN Scavenger receptor class B member 1 (SRB1) (SR-BI)
          Length = 509

 Score =  269 bits (688), Expect = 1e-71
 Identities = 145/428 (33%), Positives = 232/428 (54%), Gaps = 3/428 (0%)
 Frame = +3

Query: 78   VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
            +G +  V GI +  ++P I+ +Q+ K + +   SL +  W+   +P Y+  +FF+++NP 
Sbjct: 17   IGLLFAVLGIIMIVMVPSIIKQQVLKNVRIDPNSLSFNMWKEIPVPFYLSVYFFNIVNPE 76

Query: 258  EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
             I+ G KP +++ GPY YRE+R K +I F +N +VS+L+ R + F   +S G +SD    
Sbjct: 77   GIIQGQKPQVQEHGPYVYREFRHKSNITFNNNDTVSFLEYRSYQFQPDKSRGQESDYIVM 136

Query: 438  VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYG--LFMKISVRNITWGYEDPFLKKLNE 611
             NI V+     +EN+   LK ++ +    F   G   FM  +V  I WGY+DP +  +N+
Sbjct: 137  PNILVLSASMMMENRPGLLKLMMTLA---FSTLGQRAFMNRTVGEIMWGYDDPLIHLINQ 193

Query: 612  LSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYAN 791
                  +      GLF   NN++  ++   +G  N      +++WNG + ++ W+    N
Sbjct: 194  YFP-NSLPFKGKFGLFAELNNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNYWHSDQCN 252

Query: 792  MINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFANHS 971
            MINGT G M+AP++   S L  +  + CRS+   Y       G+P+  + AP ++FAN S
Sbjct: 253  MINGTSGQMWAPFMTPESSLEFYSPEACRSMKLVYKEQGVFGGIPTFRFVAPSTLFANGS 312

Query: 972  VNPDNEGFCLDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGINPS-SEF 1148
            V P NEGFC    C  +G+ N+S C    AP+ +S PHFY+A     +AV G++P+  E 
Sbjct: 313  VYPPNEGFC---PCRESGIQNVSTC-RFNAPLFLSHPHFYNADPVLAEAVSGLHPNPKEH 368

Query: 1149 KTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNISSVVLPMMWLNESVLISDALAG 1328
               L + P TG+P+  + KLQ+++ +K VK   +  NI  VVLP+MW  ES  +      
Sbjct: 369  SLFLDIHPVTGIPMNCSVKLQLSLFVKSVKGIGQTGNIQPVVLPLMWFEESGAMEGETLE 428

Query: 1329 TIRSTLVL 1352
            T    LVL
Sbjct: 429  TFYIQLVL 436

>sp|P16671|CD36_HUMAN Platelet glycoprotein IV (GPIV) (Glycoprotein IIIb) (GPIIIB)
            (Leukocyte differentiation antigen CD36) (CD36 antigen)
            (PAS IV) (PAS-4 protein) (Platelet collagen receptor)
            (Fatty acid translocase) (FAT) (Thrombospondin receptor)
          Length = 472

 Score =  265 bits (676), Expect = 4e-70
 Identities = 148/431 (34%), Positives = 241/431 (55%), Gaps = 9/431 (2%)
 Frame = +3

Query: 75   IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
            ++G ++ V G  +  +  +++ K I K + L+ G++ ++ W  T    Y QFW FDV NP
Sbjct: 14   VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNP 73

Query: 255  SEILTGAKP-SLRQIGPYTYR-EYRSKYDI-KFYDNGSVSYLQKRLFYFDRSRSVGDDSD 425
             E++  +    ++Q GPYTYR  + +K ++ +  ++ +VS+LQ     F+ S SVG ++D
Sbjct: 74   QEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGTEAD 133

Query: 426  TFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKL 605
             FT +N+ V       +NQ+  ++ I+N ++   ++  +F   ++R + WGY DPFL   
Sbjct: 134  NFTVLNLAVAAASHIYQNQF--VQMILNSLINKSKS-SMFQVRTLRELLWGYRDPFLS-- 188

Query: 606  NELSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKY 785
                  +   V   +GLFY  NNT D VY   +G  N+     I+ + G  ++S W + +
Sbjct: 189  -----LVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESH 242

Query: 786  ANMINGTDGSMFAPYLNRSSRLYIFQSDICRSIYATYVGSEEIKGVPSMNYAAPDSVFAN 965
             +MINGTD + F P++ +S  L  F SDICRSIYA +     +KG+P   +  P   FA+
Sbjct: 243  CDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAFAS 302

Query: 966  HSVNPDNEGFC----LDGDCMGAGVLNLSKCVPGGAPIIMSQPHFYSAAEKYIDAVYGIN 1133
               NPDN  FC    +  +C   GVL++SKC   G P+ +S PHF  A+    + + G+N
Sbjct: 303  PVENPDNYCFCTEKIISKNCTSYGVLDISKC-KEGRPVYISLPHFLYASPDVSEPIDGLN 361

Query: 1134 PS-SEFKTILKLEPTTGLPLQLAKKLQINIAIKPVKDFFKMDNIS-SVVLPMMWLNESVL 1307
            P+  E +T L +EP TG  LQ AK+LQ+N+ +KP +    + N+  + ++P++WLNE+  
Sbjct: 362  PNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETGT 421

Query: 1308 ISDALAGTIRS 1340
            I D  A   RS
Sbjct: 422  IGDEKANMFRS 432

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,512,946
Number of Sequences: 369166
Number of extensions: 4356936
Number of successful extensions: 12119
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12004
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 19268176095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00116

  1. Dr_sW_003_O17
  2. Dr_sW_022_P03
  3. Dr_sW_005_B05