Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_O17
(858 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27615|SCRB2_RAT Lysosome membrane protein II (LIMP II) ... 192 1e-48
sp|O35114|SCRB2_MOUSE Lysosome membrane protein II (LIMP II... 189 1e-47
sp|Q14108|SCRB2_HUMAN Lysosome membrane protein II (LIMP II... 181 2e-45
sp|Q8WTV0|SCRB1_HUMAN Scavenger receptor class B member 1 (... 173 6e-43
sp|P97943|SCRB1_RAT Scavenger receptor class B member 1 (SR... 172 1e-42
sp|Q60417|SCRB1_CRIGR Scavenger receptor class B member 1 (... 171 2e-42
sp|Q61009|SCRB1_MOUSE Scavenger receptor class B member 1 (... 171 2e-42
sp|Q8SQC1|SCRB1_PIG Scavenger receptor class B member 1 (SR... 164 4e-40
sp|O18824|SCRB1_BOVIN Scavenger receptor class B member 1 (... 159 7e-39
sp|P16671|CD36_HUMAN Platelet glycoprotein IV (GPIV) (Glyco... 144 4e-34
>sp|P27615|SCRB2_RAT Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
member 2) (85 kDa lysosomal membrane sialoglycoprotein)
(LGP85) (CD36 antigen-like 2)
Length = 478
Score = 192 bits (488), Expect = 1e-48
Identities = 99/274 (36%), Positives = 160/274 (58%), Gaps = 7/274 (2%)
Frame = +3
Query: 57 CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
C + ++LV +T+ + V + I K + L+NG+ +++ W+ LP YIQF
Sbjct: 5 CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFDSWEKPPLPVYIQF 64
Query: 231 WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNG-SVSYLQKRLFYFDRSRS 407
+FF+V NP EIL G P L ++GPYTYRE R+K +++F +NG ++S + + + F+R++S
Sbjct: 65 YFFNVTNPEEILQGEIPLLEEVGPYTYRELRNKANVQFGENGTTISAVTNKAYIFERNQS 124
Query: 408 VGDDS-DTFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYE 584
VGD + D T+NIP++ + + + + L+EI+ +++ ++ LF+ +V + WGY+
Sbjct: 125 VGDPTVDLIRTINIPLLTVVEMAQQPF--LREIIEAMLKAYQQ-TLFVTHTVHELLWGYK 181
Query: 585 DPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGS 755
D E+ +HI+ V PN GLFY +N TND Y+ +G N N+ KI WNG
Sbjct: 182 D-------EVLSLVHIFRPDVSPNFGLFYERNGTNDGEYVFLTGEDNYLNFTKIVEWNGK 234
Query: 756 NHISMWNDKYANMINGTDGSMFAPYLNRSSRLYI 857
+ W NMINGTDG F P +++ LYI
Sbjct: 235 TSLDWWTTDTCNMINGTDGDSFHPLISKDETLYI 268
>sp|O35114|SCRB2_MOUSE Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
member 2) (85 kDa lysosomal membrane sialoglycoprotein)
(LGP85)
Length = 478
Score = 189 bits (479), Expect = 1e-47
Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 7/274 (2%)
Frame = +3
Query: 57 CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
C + ++LV +T+ + V + I K + L+NG+ ++ W+ LP YIQF
Sbjct: 5 CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFNSWEKPPLPVYIQF 64
Query: 231 WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNG-SVSYLQKRLFYFDRSRS 407
+FF+V NP EIL G P L ++GPYTYRE R+K +I+F +NG ++S + + + F+R++S
Sbjct: 65 YFFNVTNPEEILQGEIPLLEEVGPYTYRELRNKANIQFGENGTTISAVTNKAYVFERNQS 124
Query: 408 VGDDS-DTFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYE 584
VGD + D T+NIP++ + D Q L+E++ +++ ++ LF+ +V + WGY+
Sbjct: 125 VGDPNVDLIRTINIPLLTVVDLA--QLTLLRELIEAMLKAYQQ-KLFVIHTVHELLWGYK 181
Query: 585 DPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGS 755
D E+ +HI+ V PN GLFY +N TND Y+ +G N N+ KI WNG
Sbjct: 182 D-------EILSLVHIFKPDVSPNFGLFYERNGTNDGEYVFLTGEDNYLNFSKIVEWNGK 234
Query: 756 NHISMWNDKYANMINGTDGSMFAPYLNRSSRLYI 857
+ W NMINGTDG F P +++ LY+
Sbjct: 235 TSLDWWTTDTCNMINGTDGDSFHPLISKDEVLYL 268
>sp|Q14108|SCRB2_HUMAN Lysosome membrane protein II (LIMP II) (Scavenger receptor class B
member 2) (85 kDa lysosomal membrane sialoglycoprotein)
(LGP85) (CD36 antigen-like 2)
Length = 478
Score = 181 bits (460), Expect = 2e-45
Identities = 100/275 (36%), Positives = 155/275 (56%), Gaps = 8/275 (2%)
Frame = +3
Query: 57 CSILCFIVGFIILVCGITIYF--IIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQF 230
C + ++LV +T+ + V + I K + L+NG+ ++ W+ LP Y QF
Sbjct: 5 CFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQF 64
Query: 231 WFFDVLNPSEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNG-SVSYLQKRLFYFDRSRS 407
+FF+V NP EIL G P + ++GPYTYRE R+K +I+F DNG ++S + + + F+R +S
Sbjct: 65 YFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQS 124
Query: 408 VGDDS-DTFTTVNIPVMVIGDKIE-NQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGY 581
VGD D T+NIPV+ + IE +Q L+EI+ +++ ++ LF+ +V + WGY
Sbjct: 125 VGDPKIDLIRTLNIPVLTV---IEWSQVHFLREIIEAMLKAYQQ-KLFVTHTVDELLWGY 180
Query: 582 EDPFLKKLNELSKFIHIY---VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNG 752
+D E+ IH++ + P GLFY KN TND Y+ +G + N+ KI WNG
Sbjct: 181 KD-------EILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNG 233
Query: 753 SNHISMWNDKYANMINGTDGSMFAPYLNRSSRLYI 857
+ W NMINGTDG F P + + LY+
Sbjct: 234 KTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYV 268
>sp|Q8WTV0|SCRB1_HUMAN Scavenger receptor class B member 1 (SRB1) (SR-BI) (CD36
antigen-like 1) (CD36 and LIMPII analogous 1) (CLA-1)
(Collagen type I receptor, thrombospondin receptor-like
1)
Length = 552
Score = 173 bits (438), Expect = 6e-43
Identities = 90/261 (34%), Positives = 144/261 (55%), Gaps = 2/261 (0%)
Frame = +3
Query: 75 IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
+ G + V G + ++P ++ +Q+ K + + SL + W+ +P Y+ +FFDV+NP
Sbjct: 16 VAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDVMNP 75
Query: 255 SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
SEIL G KP +R+ GPY YRE+R K +I F +N +VS+L+ R F F S+S G +SD
Sbjct: 76 SEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIV 135
Query: 435 TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYG--LFMKISVRNITWGYEDPFLKKLN 608
NI V+ +EN+ LK I+ + F G FM +V I WGY+DP + +N
Sbjct: 136 MPNILVLGAAVMMENKPMTLKLIMTLA---FTTLGERAFMNRTVGEIMWGYKDPLVNLIN 192
Query: 609 ELSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYA 788
+ + + D GLF NN++ ++ +G N+ +++WNG + + W+
Sbjct: 193 KYFPGMFPFKD-KFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQC 251
Query: 789 NMINGTDGSMFAPYLNRSSRL 851
NMINGT G M+ P++ S L
Sbjct: 252 NMINGTSGQMWPPFMTPESSL 272
>sp|P97943|SCRB1_RAT Scavenger receptor class B member 1 (SRB1) (SR-BI)
Length = 509
Score = 172 bits (435), Expect = 1e-42
Identities = 89/261 (34%), Positives = 146/261 (55%), Gaps = 2/261 (0%)
Frame = +3
Query: 75 IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
++G + G+ + ++P ++ +Q+ K + + SL + W+ +P Y+ +FF+V+NP
Sbjct: 16 VLGLLCAALGVIMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNP 75
Query: 255 SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
SE+L G KP +R+ GPY YRE+R K +I F DN +VSY++ R F RS G +SD
Sbjct: 76 SEVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSYIENRSLRFQPDRSQGSESDYIV 135
Query: 435 TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNEL 614
NI V+ +E++ LK ++ + + FM +V I WGYEDPF +N L
Sbjct: 136 LPNILVLGGAVMMEDKPTSLKLLMTLGLVTM-GQRAFMNRTVGEILWGYEDPF---VNFL 191
Query: 615 SKFI--HIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYA 788
SK+ + GLF G N+++ V+ +G N +++WNG + ++ W+ +
Sbjct: 192 SKYFPDMFPIKGKFGLFVGMNDSSSGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQC 251
Query: 789 NMINGTDGSMFAPYLNRSSRL 851
NMINGT G M+AP++ S L
Sbjct: 252 NMINGTAGQMWAPFMTPESSL 272
>sp|Q60417|SCRB1_CRIGR Scavenger receptor class B member 1 (SRB1) (SR-BI) (HaSR-BI)
Length = 509
Score = 171 bits (433), Expect = 2e-42
Identities = 88/259 (33%), Positives = 146/259 (56%)
Frame = +3
Query: 75 IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
+VG + V G+ + ++P ++ +Q+ K + + SL + W+ +P Y+ +FF+V+NP
Sbjct: 16 VVGLLCAVLGVVMILVMPSLIKQQVLKNVRIDPSSLSFAMWKEIPVPFYLSVYFFEVVNP 75
Query: 255 SEILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFT 434
SEIL G KP +R+ GPY YRE+R K +I F DN +VS+++ R +F RS G +SD
Sbjct: 76 SEILKGEKPVVRERGPYVYREFRHKANITFNDNDTVSFVEHRSLHFQPDRSHGSESDYII 135
Query: 435 TVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNEL 614
NI V+ +E++ LK ++ + + FM +V I WGYEDPF+ +N+
Sbjct: 136 LPNILVLGGAVMMESKSAGLKLMMTLGLATL-GQRAFMNRTVGEILWGYEDPFVNFINKY 194
Query: 615 SKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANM 794
+ + GLF NN++ ++ +G N ++RWNG + ++ W+ + NM
Sbjct: 195 LPDM-FPIKGKFGLFVEMNNSDSGLFTVFTGVQNFSKIHLVDRWNGLSKVNYWHSEQCNM 253
Query: 795 INGTDGSMFAPYLNRSSRL 851
INGT G M+AP++ S L
Sbjct: 254 INGTSGQMWAPFMTPQSSL 272
>sp|Q61009|SCRB1_MOUSE Scavenger receptor class B member 1 (SRB1) (SR-BI)
Length = 509
Score = 171 bits (433), Expect = 2e-42
Identities = 86/258 (33%), Positives = 144/258 (55%)
Frame = +3
Query: 78 VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
+G + G+ + ++P ++ +Q+ K + + SL + W+ +P Y+ +FF+V+NP+
Sbjct: 17 LGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNPN 76
Query: 258 EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
E+L G KP +R+ GPY YRE+R K +I F DN +VS+++ R +F +S G +SD
Sbjct: 77 EVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHGSESDYIVL 136
Query: 438 VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNELS 617
NI V+ +E++ LK ++ + + FM +V I WGY+DPF+ LN
Sbjct: 137 PNILVLGGSILMESKPVSLKLMMTLALVTM-GQRAFMNRTVGEILWGYDDPFVHFLNTYL 195
Query: 618 KFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANMI 797
+ + + GLF G NN+N V+ +G N +++WNG + I W+ + NMI
Sbjct: 196 PDM-LPIKGKFGLFVGMNNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMI 254
Query: 798 NGTDGSMFAPYLNRSSRL 851
NGT G M+AP++ S L
Sbjct: 255 NGTSGQMWAPFMTPESSL 272
>sp|Q8SQC1|SCRB1_PIG Scavenger receptor class B member 1 (SRB1) (SR-BI) (High density
lipoprotein receptor SR-BI)
Length = 509
Score = 164 bits (414), Expect = 4e-40
Identities = 86/259 (33%), Positives = 142/259 (54%), Gaps = 1/259 (0%)
Frame = +3
Query: 78 VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
VG ++ G + ++P I+ +Q+ K + + SL + W+ +P Y+ +FFDV+NP+
Sbjct: 17 VGLLLAALGAVMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIPVPFYLSVYFFDVINPN 76
Query: 258 EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
EIL G KP +R+ GPY YRE+R K +I F DN +VS+L+ R + F +S G +SD
Sbjct: 77 EILQGQKPQVRERGPYVYREFRHKSNITFNDNDTVSFLEYRSYQFQPHKSRGLESDYIVI 136
Query: 438 VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKLNELS 617
NI V+ +E++ LK I+ F+ +V I WGYEDP + +N+
Sbjct: 137 PNILVLSASVMMEDRPMSLKLIMTFAFSALGERA-FVNRTVGEIMWGYEDPLIHLINKY- 194
Query: 618 KFIHIY-VDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYANM 794
F +++ GLF NN++ ++ +G + +++WNG + ++ W+ NM
Sbjct: 195 -FPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKDFSRIHLVDKWNGLSKVNFWHSDQCNM 253
Query: 795 INGTDGSMFAPYLNRSSRL 851
INGT G M+AP++ S L
Sbjct: 254 INGTSGQMWAPFMTPESSL 272
>sp|O18824|SCRB1_BOVIN Scavenger receptor class B member 1 (SRB1) (SR-BI)
Length = 509
Score = 159 bits (403), Expect = 7e-39
Identities = 83/260 (31%), Positives = 141/260 (54%), Gaps = 2/260 (0%)
Frame = +3
Query: 78 VGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNPS 257
+G + V GI + ++P I+ +Q+ K + + SL + W+ +P Y+ +FF+++NP
Sbjct: 17 IGLLFAVLGIIMIVMVPSIIKQQVLKNVRIDPNSLSFNMWKEIPVPFYLSVYFFNIVNPE 76
Query: 258 EILTGAKPSLRQIGPYTYREYRSKYDIKFYDNGSVSYLQKRLFYFDRSRSVGDDSDTFTT 437
I+ G KP +++ GPY YRE+R K +I F +N +VS+L+ R + F +S G +SD
Sbjct: 77 GIIQGQKPQVQEHGPYVYREFRHKSNITFNNNDTVSFLEYRSYQFQPDKSRGQESDYIVM 136
Query: 438 VNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYG--LFMKISVRNITWGYEDPFLKKLNE 611
NI V+ +EN+ LK ++ + F G FM +V I WGY+DP + +N+
Sbjct: 137 PNILVLSASMMMENRPGLLKLMMTLA---FSTLGQRAFMNRTVGEIMWGYDDPLIHLINQ 193
Query: 612 LSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKYAN 791
+ GLF NN++ ++ +G N +++WNG + ++ W+ N
Sbjct: 194 YFP-NSLPFKGKFGLFAELNNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNYWHSDQCN 252
Query: 792 MINGTDGSMFAPYLNRSSRL 851
MINGT G M+AP++ S L
Sbjct: 253 MINGTSGQMWAPFMTPESSL 272
>sp|P16671|CD36_HUMAN Platelet glycoprotein IV (GPIV) (Glycoprotein IIIb) (GPIIIB)
(Leukocyte differentiation antigen CD36) (CD36 antigen)
(PAS IV) (PAS-4 protein) (Platelet collagen receptor)
(Fatty acid translocase) (FAT) (Thrombospondin receptor)
Length = 472
Score = 144 bits (362), Expect = 4e-34
Identities = 82/262 (31%), Positives = 144/262 (54%), Gaps = 3/262 (1%)
Frame = +3
Query: 75 IVGFIILVCGITIYFIIPVIVHKQISKMLPLKNGSLIYEEWQNTSLPAYIQFWFFDVLNP 254
++G ++ V G + + +++ K I K + L+ G++ ++ W T Y QFW FDV NP
Sbjct: 14 VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNP 73
Query: 255 SEI-LTGAKPSLRQIGPYTYR-EYRSKYDI-KFYDNGSVSYLQKRLFYFDRSRSVGDDSD 425
E+ + + ++Q GPYTYR + +K ++ + ++ +VS+LQ F+ S SVG ++D
Sbjct: 74 QEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGTEAD 133
Query: 426 TFTTVNIPVMVIGDKIENQWWPLKEIVNIVMQFFENYGLFMKISVRNITWGYEDPFLKKL 605
FT +N+ V +NQ+ ++ I+N ++ ++ +F ++R + WGY DPFL
Sbjct: 134 NFTVLNLAVAAASHIYQNQF--VQMILNSLINKSKS-SMFQVRTLRELLWGYRDPFL--- 187
Query: 606 NELSKFIHIYVDPNIGLFYGKNNTNDSVYIADSGNVNLDNYMKIERWNGSNHISMWNDKY 785
+ V +GLFY NNT D VY +G N+ I+ + G ++S W + +
Sbjct: 188 ----SLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESH 242
Query: 786 ANMINGTDGSMFAPYLNRSSRL 851
+MINGTD + F P++ +S L
Sbjct: 243 CDMINGTDAASFPPFVEKSQVL 264
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,358,604
Number of Sequences: 369166
Number of extensions: 2254115
Number of successful extensions: 5789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5739
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)