DrC_00111
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00111 (1516 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor 179 1e-44 sp|P20909|CA1B_RAT Collagen alpha 1(XI) chain precursor 178 3e-44 sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor 177 9e-44 sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor 176 1e-43 sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor 175 4e-43 sp|P08121|CO3A1_MOUSE Collagen alpha 1(III) chain precursor 170 9e-42 sp|P13941|CO3A1_RAT Collagen alpha 1(III) chain precursor 169 2e-41 sp|P02461|CO3A1_HUMAN Collagen alpha 1(III) chain precursor 169 2e-41 sp|O46392|CO1A2_CANFA Collagen alpha 2(I) chain precursor 169 2e-41 sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor 169 2e-41
>sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor Length = 1804 Score = 179 bits (455), Expect = 1e-44 Identities = 146/516 (28%), Positives = 208/516 (40%), Gaps = 11/516 (2%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G +G G GPVG G+ GP G GP G G Sbjct: 1296 PPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPG 1355 Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360 PGK G G +G G QGE G +G+ G G G G GP GP G Sbjct: 1356 PPGKRGPPGASGSEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVG 1415 Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540 G G PG KG+ KG G PG IG +G G+ G G G G Sbjct: 1416 EQGLPGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1475 Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720 +G+ G KG+ G+ GP G +G G G GD G G PG PG Sbjct: 1476 SQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPPG 1535 Query: 721 PPGQVKVRNPPEGSSGRYKRSTRA---------QSFGDINDALFEKVDKITNKIKKLRFP 873 PPG+V ++ P S + +R T + + D + +F ++ + I+ ++FP Sbjct: 1536 PPGEV-IQPLPILSPKKTRRHTESIQGDAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFP 1594 Query: 874 TGLNKDSATRTCADIK-SHRKSPIDGSYYIDPNEGSGKDSIEVECIFSEEDEVKTCLSSV 1050 G + A RTC D++ SH P DG Y+IDPN+G DS +V C F+ E TC+ Sbjct: 1595 MGTQTNPA-RTCKDLQLSHPDFP-DGEYWIDPNQGCSGDSFKVYCNFTAGGE--TCIYPD 1650 Query: 1051 KQLGGLYNYKKPMKGETNWQNSLRLEGALTRAPDLHSMYVDHTQMNFLRMQNSKSYQEIE 1230 K+ G+ P + +W + + G L D+ ++ QM FL++ + + Q Sbjct: 1651 KKSEGVRISSWPKEKPGSWYSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFT 1709 Query: 1231 FLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKGER-LGPNEGYMDKRVYKNEFG 1407 + C QS + +D S K R LG N+ M Y+N Sbjct: 1710 YNCHQSAAW-------------------YDVLSGSYDKALRFLGSNDEEMS---YENN-- 1745 Query: 1408 RAIFNVTIEYDGCMYRTPGSSSKFKLETTELSMLPI 1515 ++ YDGC R + ++ T ++ +PI Sbjct: 1746 ---PHIKALYDGCASRKGYEKTVIEINTPKIDQVPI 1778
Score = 127 bits (319), Expect = 9e-29
Identities = 88/259 (33%), Positives = 107/259 (41%), Gaps = 9/259 (3%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVG---SPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
+G EG G QGPVG GE G G AGP+G PGP
Sbjct: 1042 KGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1101
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPG---IVGNMGERGPTGPIGIVXXXXXXXX 345
+ G GL GPAG G GE G++G+ G PG G+ GE GP GP G+
Sbjct: 1102 DGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGI 1161
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGP---VGNKGDPGA 516
+G G PG G L+G+ G PG G VG G PG
Sbjct: 1162 AGGDGEPGPRGQQGMFGQKGDEGARGFPGLPGPIGLQGLPGPPGEKGENGDVGPMGPPGP 1221
Query: 517 PGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
PG GPQG G GP+G G +G GVVG+ GE + GL G+ G+
Sbjct: 1222 PGPRGPQGPNGADGPQGPPGSIGSVGVVGDKGE---PGEAGNPGPPGEAGSGGLKGERGE 1278
Query: 697 IGRPGNPGPPGQVKVRNPP 753
G G PG G ++ PP
Sbjct: 1279 KGEAGPPGAAGPAGIKGPP 1297
Score = 122 bits (307), Expect = 2e-27
Identities = 88/266 (33%), Positives = 108/266 (40%), Gaps = 12/266 (4%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G+ G GP G GE GP GL GP G+PGP +
Sbjct: 629 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGPPGQPG---------------------IG 667
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G QGP G GPQGE G G +GNPG G G +GP GP G
Sbjct: 668 GIDGPQGPKGNMGPQGEPGPPGQQGNPGSQGLPGPQGPIGPPG---------------EK 712
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
DG G PG++G+ KG +G PG GP+G G G G+ G +G +
Sbjct: 713 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLK 772
Query: 547 GNQGPKGETGL------------MGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI 690
G++G KGE G G G VG GE G G+
Sbjct: 773 GSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEK 832
Query: 691 GDIGRPGNPGPPGQVKVRNPPEGSSG 768
G +G PG PG PG R P+GS+G
Sbjct: 833 GKLGVPGLPGYPG----RQGPKGSTG 854
Score = 119 bits (299), Expect = 2e-26
Identities = 87/263 (33%), Positives = 106/263 (40%), Gaps = 9/263 (3%)
Frame = +1
Query: 7 GVEGDLGIQG---PVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXX 168
G+ G +G+QG P G KGE +GP+G GP G GP
Sbjct: 1190 GLPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGVV 1249
Query: 169 XXXXLPGKAGLQGP---AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
PG+AG GP AG G +GE GE+G+ G PG G G +GP G G
Sbjct: 1250 GDKGEPGEAGNPGPPGEAGSGGLKGERGEKGEAGPPGAAGPAGIKGPPGDDGPKGNPGPV 1309
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
G+ G+PGQ G G G G GP G +G PGA
Sbjct: 1310 GFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGP---PGPSGEAGPPGPPGKRGPPGAS 1366
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
GS G QG++G +G G G G G VG G +GLPG G
Sbjct: 1367 GSEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQD 1426
Query: 700 GRPGNPGPPGQVKVRNPPEGSSG 768
G PG GPPG ++ P GS G
Sbjct: 1427 GPPGPLGPPGLPGLKGDP-GSKG 1448
Score = 117 bits (294), Expect = 7e-26
Identities = 86/261 (32%), Positives = 105/261 (40%), Gaps = 6/261 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G++G GP G G GP G AGP G PGP L
Sbjct: 793 KGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGP------------SGQAGEKGKLGVPGL 840
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGN---MGERGPTGPIGIVXXXXXXXXXXX 354
PG G QGP G G G G G++G GI G G+RGPTGP G
Sbjct: 841 PGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRG------------S 888
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSP---GTIGPVGNKGDPGAPGS 525
DG G PG++G + +G +G P G GP G G PG PG
Sbjct: 889 RGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQ 948
Query: 526 IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G G +G GP G G++GP G GE G +GLPG G G
Sbjct: 949 RGETGFQGKTGPPGPGGVVGPQGPTGETG---PIGERGHPGPPGPPGEQGLPGAAGKEGA 1005
Query: 706 PGNPGPPGQVKVRNPPEGSSG 768
G+PGP G + ++ P G G
Sbjct: 1006 KGDPGPQG-ISGKDGPAGIRG 1025
Score = 114 bits (285), Expect = 7e-25
Identities = 79/266 (29%), Positives = 97/266 (36%), Gaps = 24/266 (9%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KG +GP G GP+G PGP
Sbjct: 728 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFK 787
Query: 187 GKAGLQG---------PAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
G GL+G P G +GP+G G G G+PG G GE+G G G+
Sbjct: 788 GDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 847
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
+ GK G GQ+G +G G+ G G G KG G
Sbjct: 848 GPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGD 907
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP------ 681
G GP G+RG QGP+G G GP G G G+ G P
Sbjct: 908 GPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTGPPGPGGVV 967
Query: 682 ---------GDIGDIGRPGNPGPPGQ 732
G IG+ G PG PGPPG+
Sbjct: 968 GPQGPTGETGPIGERGHPGPPGPPGE 993
Score = 112 bits (280), Expect = 3e-24
Identities = 90/292 (30%), Positives = 103/292 (35%), Gaps = 20/292 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGP---IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P+G G G GP G +G GP +G GP G PGP
Sbjct: 900 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTG 959
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERG------DRGNPGIVGNMGERGPTGPIGI----- 318
G G QGP G GP GE G G ++G PG G G +G GP GI
Sbjct: 960 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1019
Query: 319 -VXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKG---IMGSPGTIG 486
G VG PG++G G + G PG G
Sbjct: 1020 PAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQG 1079
Query: 487 PVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXX 666
P G G+ GAPG GPQG G G +G GL GP G G GE
Sbjct: 1080 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE---------DGDKGEIG 1130
Query: 667 NRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGRYKRSTRAQS--FGDIND 816
G G GD G G PGPPG P + G + R Q FG D
Sbjct: 1131 EPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGD 1182
Score = 111 bits (278), Expect = 5e-24
Identities = 81/261 (31%), Positives = 104/261 (39%), Gaps = 5/261 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G+ GD G +GP GR G G GL GP G+
Sbjct: 459 PSGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAIL 518
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
+ L+GP G G G G G G+ G G G+ GP GP G+
Sbjct: 519 QQARIALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPGPQGPRGVQGP----------- 567
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G+PG++G G G PG G G++G G PG G +G
Sbjct: 568 ----------------PGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGDKG 611
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD---IGRPG 711
RG +GP+G GL G +G+ GEDGE RGLPG+ G +G G
Sbjct: 612 HRGERGPQGPPGLPGDDGMRGEDGEIGP---------------RGLPGEAGPRGLLGPRG 656
Query: 712 NPGPPGQVKVR--NPPEGSSG 768
PGPPGQ + + P+G G
Sbjct: 657 TPGPPGQPGIGGIDGPQGPKG 677
Score = 111 bits (277), Expect = 6e-24
Identities = 89/267 (33%), Positives = 104/267 (38%), Gaps = 11/267 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G GI GP G KG +GP G GP G G
Sbjct: 660 PPGQPGIGGIDGPQGPKGNMGPQGEPGPPGQQGNPGSQGLPGPQGPIGPPGEKGPQGKPG 719
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G G GP G G +G++GE+G G PG G +G GP G G
Sbjct: 720 LAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG--------------- 764
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
DG G G KGE KG G PG G +G KGD G G +GP+G
Sbjct: 765 ---------------ADGVRGLKGSKGE---KGEDGFPGFKGDMGLKGDRGEVGQVGPRG 806
Query: 541 KRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP------GDIG 693
+ G +GPKG TG GP+G GE G+ + G P G+ G
Sbjct: 807 EDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 866
Query: 694 DIGRPGNPGPPGQVKVRNP--PEGSSG 768
G G PGP GQ R P P GS G
Sbjct: 867 ARGIAGKPGPRGQ---RGPTGPRGSRG 890
Score = 110 bits (274), Expect = 1e-23
Identities = 80/255 (31%), Positives = 97/255 (38%), Gaps = 12/255 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSP---------GPXXXXXXXXXXXXXXXXX 153
P G +G+ G QG G +G IGP G GP G P GP
Sbjct: 687 PPGQQGNPGSQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALG 746
Query: 154 XXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
PG G++G G G +G GE+G+ G PG G+MG +G G +G V
Sbjct: 747 PPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRG 806
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGE---PGQKGERFLKGIMGSPGTIGPVGNKG 504
GK+G PG G + KG G PG G G KG
Sbjct: 807 EDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 866
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
G G GP+G+RG GP+G G GP G G G RG G
Sbjct: 867 ARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG------TSGGDGPPGPPGERGPQG 920
Query: 685 DIGDIGRPGNPGPPG 729
G +G PG GPPG
Sbjct: 921 PQGPVGFPGPKGPPG 935
Score = 80.9 bits (198), Expect = 9e-15
Identities = 56/186 (30%), Positives = 70/186 (37%), Gaps = 9/186 (4%)
Frame = +1
Query: 199 LQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXX 378
++GP G GP G G G +G G+ G+ G+RGP G G+
Sbjct: 438 VEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRY 497
Query: 379 XXXXXXXXXLDGKVGEP---------GQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+ + + +G G+ G PG +G G+ G G G G
Sbjct: 498 GGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPG 557
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
PQG RG QGP G TG G G G DG GLPGD G G G
Sbjct: 558 PQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGDKGHRGERG 617
Query: 712 NPGPPG 729
GPPG
Sbjct: 618 PQGPPG 623
Score = 68.6 bits (166), Expect = 5e-11
Identities = 59/202 (29%), Positives = 70/202 (34%), Gaps = 8/202 (3%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G AGL GP G GP G G+ GDRG PG G G G GP G +
Sbjct: 446 GPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGG------ 499
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIM--------GSPGTIGPVGNKGDPGAPG 522
DG G E + I+ G PG +G G G G PG
Sbjct: 500 --------------DGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPG 545
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
S G +G+ G+ GP+G G+ GP G G
Sbjct: 546 STGAKGESGDPGPQGPRGVQGPPGPT---------------------------------G 572
Query: 703 RPGNPGPPGQVKVRNPPEGSSG 768
+PG G PG R P G SG
Sbjct: 573 KPGKRGRPGADGGRGMP-GESG 593
Score = 58.5 bits (140), Expect = 5e-08
Identities = 45/146 (30%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKG----IMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGL 579
G GE GQKGE + + G PG GP G G PG G G G G++GP G GL
Sbjct: 418 GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGL 477
Query: 580 MGPNGVVGEDGE------------------XXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G +G+ G G RG PG +G GR
Sbjct: 478 PGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGR 537
Query: 706 PGNPGPPGQVKVRNP-----PEGSSG 768
PG G PG + P+G G
Sbjct: 538 PGPVGGPGSTGAKGESGDPGPQGPRG 563
Score = 48.5 bits (114), Expect = 5e-05
Identities = 40/129 (31%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = +1
Query: 427 PGQKGER-FLKGIMGSPGTIGPVGNKGDPGA--PGSI--GPQGKRGNQGPKGETGLMGPN 591
PG E F + + G G G KG+P PG + GP G G G G GL GP+
Sbjct: 401 PGVPAETDFTETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPS 460
Query: 592 GVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGR 771
G+ G+ G+ G PG G G PG PG + R +GS G
Sbjct: 461 GLPGDPGDRGPP---------------GRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGP 505
Query: 772 YKRSTRAQS 798
+ AQ+
Sbjct: 506 TISAQEAQA 514
>sp|P20909|CA1B_RAT Collagen alpha 1(XI) chain precursor Length = 482 Score = 178 bits (452), Expect = 3e-44 Identities = 149/517 (28%), Positives = 211/517 (40%), Gaps = 14/517 (2%) Frame = +1 Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186 GV GD G G G+ G GP G AGP G PG P Sbjct: 6 GVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGGQGEKGAKGEAGAEGPP 65 Query: 187 GKAGL---QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357 GK G QGP+G GP+G G G G G+ G G+ GP GP+G Sbjct: 66 GKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLG-------------- 111 Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537 L G G+PG KGE+ G PG IG +G G+ G G G Sbjct: 112 -------------PPGLPGLKGDPGSKGEK------GHPGLIGLIGPPGEQGEKGDRGLP 152 Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717 G +G+ G KG+ G+ GP G +G G G GD G G PG P Sbjct: 153 GTQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPP 212 Query: 718 GPPGQVKVRNPPEGSSGRYKRSTRA---------QSFGDINDALFEKVDKITNKIKKLRF 870 GPPG+V ++ P S + +R T + + D + +F ++ + I+ ++F Sbjct: 213 GPPGEV-IQPLPILSPKKTRRHTESIQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKF 271 Query: 871 PTGLNKDSATRTCADIK-SHRKSPIDGSYYIDPNEGSGKDSIEVECIFSEEDEVKTCLSS 1047 P G + A RTC D++ SH P DG Y+IDPN+G DS +V C F+ E TC+ Sbjct: 272 PMGTQTNPA-RTCKDLQLSHPDFP-DGEYWIDPNQGCSGDSFKVYCNFTAGGE--TCIYP 327 Query: 1048 VKQLGGLYNYKKPMKGETNWQNSLRLEGALTRAPDLHSMYVDHTQMNFLRMQNSKSYQEI 1227 K+ G+ P + +W + + G L D+ ++ QM FL++ S + Q Sbjct: 328 DKKSEGVRLSSWPKEKPGSWYSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTSSARQNF 386 Query: 1228 EFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKGER-LGPNEGYMDKRVYKNEF 1404 + C QS + +D S K R LG N+ M Y N Sbjct: 387 TYNCHQSTAW-------------------YDVLSGSYDKALRFLGSNDEEMS---YDNNP 424 Query: 1405 GRAIFNVTIEYDGCMYRTPGSSSKFKLETTELSMLPI 1515 ++ YDGC R + ++ T ++ +PI Sbjct: 425 -----HIKALYDGCASRKGYEKTVIEINTPKIDQVPI 456
Score = 72.4 bits (176), Expect = 3e-12
Identities = 42/114 (36%), Positives = 50/114 (43%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPN 591
G+ G G KGE G G PG GP G G PG PG GP G G++G +GE G G
Sbjct: 3 GQDGVGGDKGE---DGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGGQGEKGAKGEA 59
Query: 592 GVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPP 753
G G G+ RG+PG +G+ G PG G G PP
Sbjct: 60 GAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPP 113
Score = 72.4 bits (176), Expect = 3e-12
Identities = 45/123 (36%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 409 DGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGP 588
DG G+ G+ G+ G G G GP G G G PG+ G +G +G +G KGE G GP
Sbjct: 5 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGGQGEKGAKGEAGAEGP 64
Query: 589 ---NGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEG 759
G VG G +GLPG G G PG GPPG ++ P G
Sbjct: 65 PGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGLKGDP-G 123
Query: 760 SSG 768
S G
Sbjct: 124 SKG 126
Score = 36.6 bits (83), Expect = 0.20
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPG 99
P G +G+ G GP G+KG+ G G GP G PG
Sbjct: 184 PAGPKGNKGSSGPTGQKGDSGMPGPPGPPGPPG 216
Score = 35.0 bits (79), Expect = 0.58
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGP 102
P G G G GP G KG GP G G G PGP
Sbjct: 175 PPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGP 208
>sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor Length = 1806 Score = 177 bits (448), Expect = 9e-44 Identities = 153/517 (29%), Positives = 209/517 (40%), Gaps = 14/517 (2%) Frame = +1 Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186 GV GD G G G+ G GP G AGP G PG P Sbjct: 1330 GVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPP 1389 Query: 187 GKAGL---QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357 GK G QGPAG GP+G G G G G+ G G+ GP GP+G Sbjct: 1390 GKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMG------PPGLPGLK 1443 Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537 L G GE G+KG+R L G GSPG G G G G G GP Sbjct: 1444 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1503 Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717 G G QGPKG G GP G G+ GLPG PG P Sbjct: 1504 GLPGPQGPKGNKGSTGPAGQKGDS---------------------GLPGP------PGPP 1536 Query: 718 GPPGQVKVRNPPEGSSGRYKRSTRAQ---------SFGDINDALFEKVDKITNKIKKLRF 870 GPPG+V ++ P SS + +R T + D + +F ++ + I+ ++F Sbjct: 1537 GPPGEV-IQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKF 1595 Query: 871 PTGLNKDSATRTCADIK-SHRKSPIDGSYYIDPNEGSGKDSIEVECIFSEEDEVKTCLSS 1047 P G + A RTC D++ SH P DG Y+IDPN+G DS +V C F+ E TC+ Sbjct: 1596 PMGTQTNPA-RTCKDLQLSHPDFP-DGEYWIDPNQGCSGDSFKVYCNFTSGGE--TCIYP 1651 Query: 1048 VKQLGGLYNYKKPMKGETNWQNSLRLEGALTRAPDLHSMYVDHTQMNFLRMQNSKSYQEI 1227 K+ G+ P + +W + + G L D+ ++ QM FL++ + + Q Sbjct: 1652 DKKSEGVRISSWPKEKPGSWFSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNF 1710 Query: 1228 EFLCDQSVIYGD-SELSEENKFKFATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKNEF 1404 + C QS + D S S + +F LG N+ M N F Sbjct: 1711 TYHCHQSAAWYDVSSGSYDKALRF-------------------LGSNDEEMS--YDNNPF 1749 Query: 1405 GRAIFNVTIEYDGCMYRTPGSSSKFKLETTELSMLPI 1515 + + YDGC R + ++ T ++ +PI Sbjct: 1750 IKTL------YDGCTSRKGYEKTVIEINTPKIDQVPI 1780
Score = 130 bits (328), Expect = 8e-30
Identities = 92/276 (33%), Positives = 107/276 (38%), Gaps = 21/276 (7%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G+ G QGP GR G GP+GL GP G G
Sbjct: 1089 KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGGKGENGP 1148
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERG------PTGPIGIVXXXXXXXX 345
PG GLQGP G G G GE G RG G+ G G+ G P GPIG
Sbjct: 1149 PGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIG---------- 1198
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
L G G PG+KGE G MG PG GP G +G GA G
Sbjct: 1199 --------------------LQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGP 1238
Query: 526 IGPQG---------------KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXX 660
GP G + GN GP GE G+ GP G GE GE
Sbjct: 1239 QGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGP 1298
Query: 661 XXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSG 768
+ G G+ G +G PG+PGPPG++ P G G
Sbjct: 1299 PGDDGPKGNPGPVGFPGDPGPPGEL----GPAGQDG 1330
Score = 121 bits (304), Expect = 5e-27
Identities = 87/265 (32%), Positives = 106/265 (40%), Gaps = 9/265 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G G G+ GP G KGE +GP+G GP G GP
Sbjct: 1193 PPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1252
Query: 172 XXXLPGKAGLQGP---AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
PG+AG GP AG GP+GE GE+G+ G PG G G +GP G G
Sbjct: 1253 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDG------PKG 1306
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
DG G+ G+ G+ G G G GP G G G PG
Sbjct: 1307 NPGPVGFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPG 1366
Query: 523 SIGPQGKRGNQGPKGETGLMGP---NGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
+ G +G++G +G KGE G GP G VG G +GLPG G
Sbjct: 1367 AAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAG 1426
Query: 694 DIGRPGNPGPPGQVKVRNPPEGSSG 768
G PG GPPG ++ P GS G
Sbjct: 1427 QDGPPGPMGPPGLPGLKGDP-GSKG 1450
Score = 120 bits (300), Expect = 1e-26
Identities = 89/269 (33%), Positives = 111/269 (41%), Gaps = 15/269 (5%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G+ G GP G GE GP GL GP G+PG P
Sbjct: 631 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQ------------------------P 666
Query: 187 GKAGLQGPAG--GN-GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
G AG+ GP G GN GPQGE G G +GNPG G G +GP GP G
Sbjct: 667 GMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPG-------------- 712
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
DG G PG++G+ KG +G PG GP+G G G G+ G +
Sbjct: 713 -EKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVR 771
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD------- 696
G +G++G KGE G G G +G G+ +G G GD
Sbjct: 772 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQA 831
Query: 697 -----IGRPGNPGPPGQVKVRNPPEGSSG 768
+G PG PG PG R P+GS+G
Sbjct: 832 GEKGKLGVPGLPGYPG----RQGPKGSTG 856
Score = 117 bits (293), Expect = 9e-26
Identities = 87/261 (33%), Positives = 103/261 (39%), Gaps = 6/261 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G++G GP G G GP G AGP G PGP L
Sbjct: 795 KGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGP------------SGQAGEKGKLGVPGL 842
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGN---MGERGPTGPIGIVXXXXXXXXXXX 354
PG G QGP G G G G G++G G+ G G+RGPTGP G
Sbjct: 843 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG------------- 889
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
G G PG GER +G G G GP G G PG G G
Sbjct: 890 --SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGH 947
Query: 535 QGKRGNQGPKGETGLMGPNGVVGED---GEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G+RG G +G+TG GP GVVG GE +GLPG G G
Sbjct: 948 PGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYPGPPGPPGEQGLPGAAGKEGA 1007
Query: 706 PGNPGPPGQVKVRNPPEGSSG 768
G+PGP G + ++ P G G
Sbjct: 1008 KGDPGPQG-ISGKDGPAGLRG 1027
Score = 114 bits (284), Expect = 1e-24
Identities = 81/265 (30%), Positives = 99/265 (37%), Gaps = 11/265 (4%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KG +GP G GP+G PGP
Sbjct: 730 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFK 789
Query: 187 GKAGLQG---------PAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
G GL+G P G +GP+G G G G+PG G GE+G G G+
Sbjct: 790 GDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 849
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
+ GK G GQ+G +G G+ G G G KG G
Sbjct: 850 GPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGD 909
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
G GP G+RG QGP+G G GP G G G+ G PG G+
Sbjct: 910 GPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLP---------------GHPGQRGET 954
Query: 700 GRPGNPGPPGQVKVRNP--PEGSSG 768
G G GPPG V P P G +G
Sbjct: 955 GFQGKTGPPGPGGVVGPQGPTGETG 979
Score = 114 bits (284), Expect = 1e-24
Identities = 89/272 (32%), Positives = 96/272 (35%), Gaps = 18/272 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G G GP GL GPVG+PG P
Sbjct: 1132 GEPGQKGSKGGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1191
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G GP GE GE GD G G G G RGP GP G
Sbjct: 1192 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGV 1251
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG-------------- 504
G+ G G KGER KG G PG GP G KG
Sbjct: 1252 GEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1311
Query: 505 ----DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR 672
DPG PG +GP G+ G G KGE G G G G GE R
Sbjct: 1312 GFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGE---------AGPPGPPGKR 1362
Query: 673 GLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSG 768
G PG G GR G G G+ PP G +G
Sbjct: 1363 GPPGAAGAEGRQGEKGAKGEAGAEGPP-GKTG 1393
Score = 110 bits (276), Expect = 8e-24
Identities = 86/274 (31%), Positives = 99/274 (36%), Gaps = 18/274 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGP---IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P+G G G GP G +G GP +G GP G PGP
Sbjct: 902 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG 961
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAG------ERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
G G QGP G GP GE G G++G PG G G +G GP GI
Sbjct: 962 PPGPGGVVGPQGPTGETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1021
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGK------VGEPGQKGERFLKG---IMGSPGTIG 486
+G VG PG++G G + G PG G
Sbjct: 1022 PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQG 1081
Query: 487 PVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXX 666
P G G+ GAPG GPQG G G +G GL GP G G GE
Sbjct: 1082 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE----------------- 1124
Query: 667 NRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSG 768
GD G+IG PG G G K N P G G
Sbjct: 1125 ----DGDKGEIGEPGQKGSKGG-KGENGPPGPPG 1153
Score = 108 bits (271), Expect = 3e-23
Identities = 91/270 (33%), Positives = 109/270 (40%), Gaps = 14/270 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQ---GPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G +G++G Q GP G++G GP GL GP G GP
Sbjct: 674 PPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP---------------PGEKGPQG 718
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
L G G GP G G +G++GE+G G PG G +G GP G G
Sbjct: 719 KPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG------------ 766
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
DG G G KGE KG G PG G +G KGD G G IG
Sbjct: 767 ------------------ADGVRGLKGSKGE---KGEDGFPGFKGDMGLKGDRGEVGQIG 805
Query: 532 PQGKRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP------G 684
P+G+ G +GPKG TG GP+G GE G+ + G P G
Sbjct: 806 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANG 865
Query: 685 DIGDIGRPGNPGPPGQVKVRNP--PEGSSG 768
+ G G G PGP GQ R P P GS G
Sbjct: 866 EKGARGVAGKPGPRGQ---RGPTGPRGSRG 892
Score = 101 bits (252), Expect = 5e-21
Identities = 85/276 (30%), Positives = 105/276 (38%), Gaps = 20/276 (7%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVG-------------SPGPXXXXXXXXXXXXX 141
P G GD G +GP GR G G GL GP G S GP
Sbjct: 461 PTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAIL 520
Query: 142 XXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIV 321
PG GL G G G G +G +G+ G+PG G G +GP GP G
Sbjct: 521 QQARIALRGP----PGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTG-- 574
Query: 322 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNK 501
DG G PG+ G + +G G PG G G++
Sbjct: 575 -------------------KPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR 615
Query: 502 GD------PGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXX 663
G+ PG PG G +G+ G GP+G G GP G++G G
Sbjct: 616 GERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD--- 672
Query: 664 XNRGLPGDIGDIGRPGNPGPPGQVKVRNP-PEGSSG 768
G PG G++G G PGPPGQ NP P+G G
Sbjct: 673 ---GPPGPKGNMGPQGEPGPPGQ--QGNPGPQGLPG 703
Score = 100 bits (249), Expect = 1e-20
Identities = 81/276 (29%), Positives = 99/276 (35%), Gaps = 33/276 (11%)
Frame = +1
Query: 25 GIQGPVGRKGEIGPIGLAGPVGSPG-PXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAG- 198
G GP G G +GP GL GP G PG P LP + G
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGG 501
Query: 199 -------------------------LQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPT 303
L+GP G G G G G G+ G G G+ GP
Sbjct: 502 DGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQ 561
Query: 304 GPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTI 483
GP G+ G G+PG++G G G PG
Sbjct: 562 GPRGVQGP---------------------------PGPTGKPGKRGRPGADGGRGMPGEP 594
Query: 484 GPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXX 663
G G++G G PG G +G RG +GP+G G G +G+ GEDGE
Sbjct: 595 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP------------- 641
Query: 664 XNRGLPGD------IGDIGRPGNPGPPGQVKVRNPP 753
RGLPG+ +G G PG PG PG V PP
Sbjct: 642 --RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPP 675
Score = 81.3 bits (199), Expect = 7e-15
Identities = 59/189 (31%), Positives = 68/189 (35%), Gaps = 12/189 (6%)
Frame = +1
Query: 199 LQGPAGG------------NGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
++GP G GP G G+ GDRG PG G G G GP G +
Sbjct: 440 VEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRY 499
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
++ G G G+ G PG +G G+ G G G
Sbjct: 500 GGDGSKGPTISAQEAQAQAILQQARIALRGPPGP---MGLTGRPGPVGGPGSSGAKGESG 556
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
GPQG RG QGP G TG G G G DG GLPGD G G
Sbjct: 557 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG 616
Query: 703 RPGNPGPPG 729
G GPPG
Sbjct: 617 ERGPQGPPG 625
Score = 62.8 bits (151), Expect = 3e-09
Identities = 49/157 (31%), Positives = 60/157 (38%), Gaps = 37/157 (23%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKG----IMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGL 579
G GE GQKGE + + G PG GP G G PG G GP G G++GP G GL
Sbjct: 420 GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGL 479
Query: 580 MGPNGVVGEDGE------------------XXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G +G+ G G RG PG +G GR
Sbjct: 480 PGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGR 539
Query: 706 P---------------GNPGPPGQVKVRNPPEGSSGR 771
P G+PGP G V+ PP G +G+
Sbjct: 540 PGPVGGPGSSGAKGESGDPGPQGPRGVQGPP-GPTGK 575
Score = 58.2 bits (139), Expect = 6e-08
Identities = 41/109 (37%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +1
Query: 4 QGVEGDLGI---QGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
QG +GD G+ QG G KG+ G G AGP+G PGP
Sbjct: 1467 QGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGP------------------------ 1502
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIV 321
PG G QGP G G G AG++GD G P G GP GP G V
Sbjct: 1503 ---PGLPGPQGPKGNKGSTGPAGQKGDSGLP------GPPGPPGPPGEV 1542
Score = 56.2 bits (134), Expect = 2e-07
Identities = 36/105 (34%), Positives = 41/105 (39%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G++G G KGE G GL G +G PG
Sbjct: 1433 PMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPG 1492
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIG 315
G G GP G GPQG G +G G G G+ G GP GP G
Sbjct: 1493 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPG 1537
Score = 38.1 bits (87), Expect = 0.068
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPG 99
PQG +G+ G GP G+KG+ G G GP G PG
Sbjct: 1508 PQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPG 1540
>sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor Length = 1838 Score = 176 bits (447), Expect = 1e-43 Identities = 133/450 (29%), Positives = 190/450 (42%), Gaps = 21/450 (4%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G +G G GPVG G+ GP G GP G GP Sbjct: 1328 PPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSG 1387 Query: 181 LPGKAGLQGPAGGNGPQGEAGERGD---RGNPGIVGNMGERG------PTGPIGIVXXXX 333 PGK G GPAG G QGE G +G+ G PG G +G +G P G GI Sbjct: 1388 PPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVG 1447 Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513 L G G G+KG L G++G PG G G++G PG Sbjct: 1448 EQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1507 Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693 GS GP+G++G GP G G GP G+ G G G G+ G Sbjct: 1508 PQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGP---------TGPRGEAG 1558 Query: 694 DIGRPGNPGPPGQVKVRNPPEGSSGRYKRSTRAQ------------SFGDINDALFEKVD 837 G PG PGPPG+V P + S R +R+ A + D + +F ++ Sbjct: 1559 HPGPPGPPGPPGEVIQPLPIQAS--RTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLN 1616 Query: 838 KITNKIKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVECIFSE 1017 + +I++++ P G ++ A RTC D++ DG Y++DPN+G +DS +V C F+ Sbjct: 1617 SLKLEIEQMKRPLGTQQNPA-RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTA 1675 Query: 1018 EDEVKTCLSSVKQLGGLYNYKKPMKGETNWQNSLRLEGALTRAPDLHSMYVDHTQMNFLR 1197 TC+ K+ G P + +W + + G L D V QM FLR Sbjct: 1676 GG--STCVFPDKKSEGARITSWPKENPGSWFSEFK-RGKLLSYVDAEGNPVGVVQMTFLR 1732 Query: 1198 MQNSKSYQEIEFLCDQSVIYGDSELSEENK 1287 + ++ ++Q + + C QSV + D+ +K Sbjct: 1733 LLSASAHQNVTYHCYQSVAWQDAATGSYDK 1762
Score = 126 bits (317), Expect = 1e-28
Identities = 87/259 (33%), Positives = 103/259 (39%), Gaps = 9/259 (3%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVG---SPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
+G EG G GP G GE GP G AGP+G PGP
Sbjct: 1074 KGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1133
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERG------PTGPIGIVXXXXX 336
L G GL GPAG GP GE G++G+ G PG G+ G++G PTGP G +
Sbjct: 1134 DGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGP 1193
Query: 337 XXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA 516
G G PG G + L G G G G VG G PG
Sbjct: 1194 SGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGP 1253
Query: 517 PGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
PG GP G G GP+G G +G G VGE GE +G G+ G+
Sbjct: 1254 PGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGEKGE 1313
Query: 697 IGRPGNPGPPGQVKVRNPP 753
G G GPPG + PP
Sbjct: 1314 SGPSGAAGPPGP---KGPP 1329
Score = 121 bits (304), Expect = 5e-27
Identities = 87/259 (33%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G G G GP+G GE G +G+ G G PG
Sbjct: 845 PKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG---RQGPKGSIGFPGFPGANGEKGGRG 901
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PGK G +G G GP+GE G RG G PG GN G GP GP G
Sbjct: 902 TPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPG------ERGPNGPQG 955
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
DG G PGQ+GE +G G PG G VG +G G G +G +G
Sbjct: 956 PTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERG 1015
Query: 541 KRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G GP GE GL G G G+ G +RGLPG +G +G G
Sbjct: 1016 HPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKG 1075
Query: 712 NPGPPGQVKVRNPPEGSSG 768
N GPPG P GS G
Sbjct: 1076 NEGPPGP----PGPAGSPG 1090
Score = 118 bits (295), Expect = 5e-26
Identities = 86/264 (32%), Positives = 103/264 (39%), Gaps = 8/264 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G G G GP G G IG G G G
Sbjct: 1256 PRGPSGAPGADGPQGPPGGIGNPGAVGEKGE----------------------------- 1286
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG+AG GP+G +GP G GERG++G G G G GP GP G
Sbjct: 1287 -PGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAAGPPGPKGPPG------DDGPKGSPG 1339
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDP---GAPGSIG 531
G+ G PG KG+ G GSPG G G G P G PG G
Sbjct: 1340 PVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAG 1399
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P+G++G +G KGE GL GP G G G RG+PG +G+ G PG
Sbjct: 1400 PEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGL------RGIPGPVGEQGLPG 1453
Query: 712 NPGPPGQVKVRNPP-----EGSSG 768
+PGP G PP +G SG
Sbjct: 1454 SPGPDGPPGPMGPPGLPGLKGDSG 1477
Score = 117 bits (292), Expect = 1e-25
Identities = 89/262 (33%), Positives = 97/262 (37%), Gaps = 8/262 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G +G GP G GP+G PGP P
Sbjct: 1162 GEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFP 1221
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G GP GE GE GD G G G G RGP+G G
Sbjct: 1222 GPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV 1281
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG---APGSIGPQ 537
G+ G PG KGER KG G G GP G KG PG GS GP
Sbjct: 1282 GEKGEPGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPV 1341
Query: 538 GKRGNQGPKGETGLMG---PNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRP 708
G G+ GP GE G G P G G+DGE G G G G P
Sbjct: 1342 GFPGDPGPPGEPGPAGQDGPPGDKGDDGEP------------------GQTGSPGPTGEP 1383
Query: 709 GNPGPPGQVKVRNP--PEGSSG 768
G GPPG+ P PEG G
Sbjct: 1384 GPSGPPGKRGPPGPAGPEGRQG 1405
Score = 115 bits (288), Expect = 3e-25
Identities = 81/255 (31%), Positives = 104/255 (40%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
QG+ G G GP G KG +G GL G G+ GP
Sbjct: 729 QGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGY 788
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
PG G++G G G +G GE+G+ G PG G+MG +G G IG
Sbjct: 789 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 848
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
G +G PG+KG+ + G+ G PG GP G+ G PG PG+ G +G
Sbjct: 849 GGPNGDP---------GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGG 899
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGP 723
RG G G G GP G GE G G PG G+ G G GP
Sbjct: 900 RGTPGKPGPRGQRGPTGPRGERGPRGI---------------TGKPGPKGNSGGDGPAGP 944
Query: 724 PGQVKVRNPPEGSSG 768
PG+ + N P+G +G
Sbjct: 945 PGE-RGPNGPQGPTG 958
Score = 115 bits (287), Expect = 4e-25
Identities = 86/275 (31%), Positives = 106/275 (38%), Gaps = 18/275 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+GV+G G G GR+G G G G G GP
Sbjct: 593 PRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAG--------------- 637
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
LPG+ G +G G +GP G G+ G+RG+ G VG G G GP G++
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPG 697
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGD------PGAPG 522
G+ G PGQ+G +G+ G G IGP G KG PG PG
Sbjct: 698 VTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPG 757
Query: 523 SIGPQGKRGNQGPKGE------------TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXX 666
+ GP G G +GP GE G GP GV G DG
Sbjct: 758 ADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPG 817
Query: 667 NRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGR 771
+G G GD G G PGP G+ + PEG GR
Sbjct: 818 FKGDMGIKGDRGEIGPPGPRGE----DGPEGPKGR 848
Score = 110 bits (276), Expect = 8e-24
Identities = 84/260 (32%), Positives = 96/260 (36%), Gaps = 5/260 (1%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +G+ G GP G GE GP G GP G PGP P
Sbjct: 931 GPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP---------------------P 969
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
GK GL G G G G G+ G G PG+VG G G TGP+G
Sbjct: 970 GKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGE---------------- 1013
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG GE+ G PG G G KGDPG G G G
Sbjct: 1014 --------------RGHPGPPGPPGEQ------GLPGLAGKEGTKGDPGPAGLPGKDGPP 1053
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G +G G+ GL GP G +G G G G IG GRPG GPP
Sbjct: 1054 GLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPP 1113
Query: 727 GQVKVRNP-----PEGSSGR 771
G + P+G +GR
Sbjct: 1114 GPAGEKGAPGEKGPQGPAGR 1133
Score = 108 bits (270), Expect = 4e-23
Identities = 87/285 (30%), Positives = 102/285 (35%), Gaps = 24/285 (8%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G GD G GP G G+ GP GL GP G PGP +
Sbjct: 661 GERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPG---------------------VT 699
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGI---------VGNMGERGPTGPIGIVXXXXXX 339
G G GP G GPQGE G G +GNPG +G GE+GP G G+
Sbjct: 700 GMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGAD 759
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
G +G PG +G + GI G GT G G G PG
Sbjct: 760 GPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFK 819
Query: 520 GS---------IGPQGKRGNQGPKGETGLMGPNG------VVGEDGEXXXXXXXXXXXXX 654
G IGP G RG GP+G G GPNG GE G+
Sbjct: 820 GDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQ 879
Query: 655 XXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGRYKRSTR 789
+ G PG G G G G PG+ R + R +R R
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPR 924
Score = 107 bits (266), Expect = 1e-22
Identities = 82/259 (31%), Positives = 97/259 (37%), Gaps = 18/259 (6%)
Frame = +1
Query: 31 QGPVGRKGEIGPIGLAG---PVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGL 201
Q + +G GP+GL G PVG PG PG G
Sbjct: 552 QARLALRGPAGPMGLTGRPGPVGPPGSGGLKGE---------------------PGDVGP 590
Query: 202 QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXX 381
QGP G GP G AG+ G RG G G G G TGP G
Sbjct: 591 QGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGP 650
Query: 382 XXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP------------GS 525
DG+ G+ G+ G R L G G G +GP G G PG P G+
Sbjct: 651 SGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGN 710
Query: 526 IGPQGK---RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
+GPQG+ G QG G GL GP G +G GE G+PG G
Sbjct: 711 VGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLP---------GMPGADGP 761
Query: 697 IGRPGNPGPPGQVKVRNPP 753
G PG GPPG+ + PP
Sbjct: 762 PGHPGKEGPPGEKGGQGPP 780
Score = 103 bits (256), Expect = 2e-21
Identities = 88/274 (32%), Positives = 95/274 (34%), Gaps = 30/274 (10%)
Frame = +1
Query: 1 PQGVEGDLGIQGP---------VGRKGEIGP---IGLAGPVGSPGP-------------- 102
P G EG G+ GP VG GE GP GL G G PGP
Sbjct: 470 PPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGG 529
Query: 103 -XXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVG 279
L G AG G G GP G G G +G PG VG
Sbjct: 530 GDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVG 589
Query: 280 NMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKG 459
G RG GP G DG G PG+KG R G
Sbjct: 590 PQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPG 649
Query: 460 IMGSPGTIGPVGNKGDPGAPGSIGPQGK---RGNQGPKGETGLMGPNGVVGEDGEXXXXX 630
G PG G G +GD G G G GK RG GPKG G GP GV G DG+
Sbjct: 650 PSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPGVTGMDGQ----- 704
Query: 631 XXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQ 732
PG G++G G PGPPGQ
Sbjct: 705 ----------------PGPKGNVGPQGEPGPPGQ 722
Score = 93.6 bits (231), Expect = 1e-18
Identities = 62/192 (32%), Positives = 76/192 (39%), Gaps = 9/192 (4%)
Frame = +1
Query: 181 LPGKAGLQGPAGGNGPQ---------GEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
+ G G +GPAG GP G+ GERG G PG+ G G GP G + ++
Sbjct: 467 IEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRF 526
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513
++ G G G+ G PG +GP G+ G G
Sbjct: 527 GGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGP---MGLTGRPGPVGPPGSGGLKG 583
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
PG +GPQG RG QGP G G G G G DG GLPG+ G
Sbjct: 584 EPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643
Query: 694 DIGRPGNPGPPG 729
G PG GPPG
Sbjct: 644 HRGDPGPSGPPG 655
Score = 57.0 bits (136), Expect = 1e-07
Identities = 45/141 (31%), Positives = 52/141 (36%), Gaps = 25/141 (17%)
Frame = +1
Query: 406 LDGKVGEPGQKGERFL----------------KGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+ G GE GQKGE + G+ G PGT+GP G GDPG G G
Sbjct: 445 IGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRP 504
Query: 538 GKRGNQGPKGETGLM-------GPNGVVGEDGE--XXXXXXXXXXXXXXXXXNRGLPGDI 690
G G G G G M G G G G RG G +
Sbjct: 505 GLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPM 564
Query: 691 GDIGRPGNPGPPGQVKVRNPP 753
G GRPG GPPG ++ P
Sbjct: 565 GLTGRPGPVGPPGSGGLKGEP 585
>sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor Length = 1460 Score = 175 bits (443), Expect = 4e-43 Identities = 151/527 (28%), Positives = 204/527 (38%), Gaps = 22/527 (4%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G G+ G GP+G G GP G +G GSPG Sbjct: 983 PSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPG 1042 Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360 PG G GP G G G+ GE G G G +G +G RGP GP G Sbjct: 1043 APGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPAGPQG--------------- 1087 Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540 G+ G+ G KG R G+ G PG G G +G GA G GP+G Sbjct: 1088 ---------PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRG 1138 Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720 G+ G G+ GL G G +G G RG GD G +G PG PG Sbjct: 1139 PPGSAGSPGKDGLNGLPGPIGPPGP------------------RGRTGDAGPVGPPGPPG 1180 Query: 721 PPGQVKVRNPPEG----------------SSGRYKRSTRAQSFGDINDALFEKVDKITNK 852 PPG PP G GRY R+ A D + + + ++ + Sbjct: 1181 PPGP---PGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQ 1237 Query: 853 IKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVECIFSEEDEVK 1032 I+ +R P G K+ A RTC D+K G Y+IDPN+G D+I+V C + + Sbjct: 1238 IENIRSPEGSRKNPA-RTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFC---NMETGE 1293 Query: 1033 TCLSSVKQLGGLYNY---KKPMKGETNWQNSLRLEGALTRAPDLHSMYVD-HTQMNFLRM 1200 TC+ + N+ K P + W +G S D Q+ FLR+ Sbjct: 1294 TCVYPTQPQVAQKNWYISKNPKEKRHVWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRL 1353 Query: 1201 QNSKSYQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKGERLGPNEGYMD 1380 ++++ Q I + C SV Y D + K A +L G NE Sbjct: 1354 MSTEASQNITYHCKNSVAYMD---QQTGNLKKALLLQ---------------GSNE---- 1391 Query: 1381 KRVYKNEFGRAIFNVTIEYDGCMYRTPGSSSKFKLE--TTELSMLPI 1515 + G + F ++ YDGC T G+ K +E TT+ S LPI Sbjct: 1392 --IEIRAEGNSRFTYSVTYDGCTSHT-GAWGKTVIEYKTTKTSRLPI 1435
Score = 123 bits (308), Expect = 2e-27
Identities = 81/246 (32%), Positives = 96/246 (39%), Gaps = 3/246 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G G QG G G GP G AGP G+PG
Sbjct: 353 PQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPG---------ADGQPGAKGANGAPGIAG 403
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGE---RGPTGPIGIVXXXXXXXXXX 351
PG G +GP+G GP G G +G+ G PG GN G+ +G GP GI
Sbjct: 404 APGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEG 463
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G G PG++G +G G+ G GP G G+ G+PG G
Sbjct: 464 KRGARGEPGP---------TGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAG 514
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P+G G G GE GL G G+ G G G PG G GRPG
Sbjct: 515 PKGSPGEAGRPGEAGLPGAKGLTGSPGS------------PGPDGKTGPPGPAGQDGRPG 562
Query: 712 NPGPPG 729
PGPPG
Sbjct: 563 PPGPPG 568
Score = 121 bits (303), Expect = 6e-27
Identities = 82/256 (32%), Positives = 96/256 (37%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G GD G +G G G+ G GL GP+G PGP
Sbjct: 737 PKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPG 796
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+ G GPAG GP G G+ G +G PG G G+ GP GP G
Sbjct: 797 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPPGPIGNVGAPG 856
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G G G G G PG GP G +G GA G GP G
Sbjct: 857 PKGARGSAGPPGATGFPGAAGRVGPPGP---SGNAGPPGPPGPAGKEGGKGARGETGPAG 913
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+ G GP G G G G G DG GLPG G+ G PG PG
Sbjct: 914 RPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPG 973
Query: 721 PPGQVKVRNPPEGSSG 768
P G+ + P G+SG
Sbjct: 974 PSGE-PGKQGPSGTSG 988
Score = 117 bits (294), Expect = 7e-26
Identities = 84/254 (33%), Positives = 97/254 (38%), Gaps = 12/254 (4%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
QG G G +G G +GE GP GL GP G G
Sbjct: 453 QGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPA-------- 504
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPG---IVGNMGERGPTGPIGIVXXXXXXXXXXX 354
G+ G GPAG G GEAG G+ G PG + G+ G GP G G
Sbjct: 505 -GERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGP 563
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA---PGS 525
G GEPG+ GER G+ G PG +GP G G+ GA PG
Sbjct: 564 PGPPGARGQAGVMGFPGPKGAAGEPGKAGER---GVPGPPGAVGPAGKDGEAGAQGPPGP 620
Query: 526 IGPQGKRGNQGPKGETGLM------GPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGD 687
GP G+RG QGP G G GP G G+ GE RG PG+
Sbjct: 621 AGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGE 680
Query: 688 IGDIGRPGNPGPPG 729
G G PG GP G
Sbjct: 681 RGVQGPPGPAGPRG 694
Score = 116 bits (291), Expect = 2e-25
Identities = 88/264 (33%), Positives = 97/264 (36%), Gaps = 10/264 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL- 183
G G G GP GR G G GL GP G PGP
Sbjct: 114 GPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISV 173
Query: 184 ------PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
G GL GP G GPQG G G+ G PG G MG RGP GP G
Sbjct: 174 PGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPG---KNGDDGE 230
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP-- 519
L G G PG KG R G+ G+ G GP G KG+PG+P
Sbjct: 231 AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGE 290
Query: 520 -GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
G+ G G RG G +G G GP G G DG G PG G
Sbjct: 291 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGA---------------AGPPGPTGP 335
Query: 697 IGRPGNPGPPGQVKVRNPPEGSSG 768
G PG PG G K P+G+ G
Sbjct: 336 AGPPGFPGAVG-AKGEAGPQGARG 358
Score = 114 bits (286), Expect = 6e-25
Identities = 84/264 (31%), Positives = 95/264 (35%), Gaps = 8/264 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G GP+G G GP G G G PG
Sbjct: 836 PPGPAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPG 895
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
GK G +G G GP G GE G G PG G G G GP G
Sbjct: 896 PAGKEGGKGARGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 955
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKG------ERFLKGIMGSPGTIGPVGNKGDPGAPG 522
L G GEPG++G ER G MG PG GP G G G+PG
Sbjct: 956 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPG 1015
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
+ G G+ G+ GPKG+ G GP G G G G GD G+ G
Sbjct: 1016 AEGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGP---------AGKNGDRGETG 1066
Query: 703 RPGNPGPPGQVKVRNP--PEGSSG 768
G GP G V R P P+G G
Sbjct: 1067 PAGPAGPIGPVGARGPAGPQGPRG 1090
Score = 113 bits (283), Expect = 1e-24
Identities = 78/249 (31%), Positives = 89/249 (35%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +G G GP G +GE GP G G G PGP
Sbjct: 613 GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGAR 672
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G+ G G G GP G AG RG G PG G G+ G G G
Sbjct: 673 GERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAA 732
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG+ G R L G +G PG G G+KG+ G G GP G R
Sbjct: 733 GLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGAR 792
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G +GE G GP G G G G G+ GD G G+ GPP
Sbjct: 793 GAPGDRGEPGPPGPAGFAGPPG---------------ADGQPGAKGEPGDAGAKGDAGPP 837
Query: 727 GQVKVRNPP 753
G PP
Sbjct: 838 GPAGPTGPP 846
Score = 113 bits (282), Expect = 2e-24
Identities = 88/273 (32%), Positives = 104/273 (38%), Gaps = 17/273 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G G G QGP G GE GP+G GP G PG
Sbjct: 188 PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG 247
Query: 172 XXXLPGKAGL------QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
LPG AGL +G +G +G +G+AG G +G PG G G G GP G+
Sbjct: 248 ARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGER- 306
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513
G+ G PG G R G G+ G GP G G PG
Sbjct: 307 --------------------------GRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 340
Query: 514 APGSI------GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
PG++ GPQG RG++GP+G G GP G G G G
Sbjct: 341 FPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGAD------------G 388
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNP--PEGSSG 768
PG G G PG G PG R P P+G SG
Sbjct: 389 QPGAKGANGAPGIAGAPGFPGARGPSGPQGPSG 421
Score = 113 bits (282), Expect = 2e-24
Identities = 84/261 (32%), Positives = 100/261 (38%), Gaps = 5/261 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGP---VGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G +G+ G G G G++GP GL G G+PGP
Sbjct: 278 PAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG 337
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PG G +G AG G +G G +G RG PG G G GP G G
Sbjct: 338 PPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGA----------- 386
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G G PG G R G G G GP GN G+PGAPG+ G
Sbjct: 387 -------DGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKG 439
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G +G GP TG+ GP G GE+G+ GLPG G+ G PG
Sbjct: 440 DTGAKGEPGP---TGIQGPPGPAGEEGKRGARGEPGP---------TGLPGPPGERGGPG 487
Query: 712 NPGPPGQVKVRNP--PEGSSG 768
+ G PG V P P G G
Sbjct: 488 SRGFPGADGVAGPKGPAGERG 508
Score = 110 bits (275), Expect = 1e-23
Identities = 82/257 (31%), Positives = 97/257 (37%), Gaps = 9/257 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KGE GP G+ GP PGP P
Sbjct: 430 GEPGAPGNKGDTGAKGEPGPTGIQGP---PGPAGEEGKRGARGEPGPTGLPGPPGERGGP 486
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G GP+G AGERG G G G+ GE G G G+
Sbjct: 487 GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPD 546
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGN------KGDPGAPGSI 528
DG+ G PG G R G+MG PG G G +G PG PG++
Sbjct: 547 GKTGPPGPAGQ---DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAV 603
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI---GDI 699
GP GK G G +G G GP G GE G +GLPG G+
Sbjct: 604 GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF------------QGLPGPAGPPGEA 651
Query: 700 GRPGNPGPPGQVKVRNP 750
G+PG G PG + P
Sbjct: 652 GKPGEQGVPGDLGAPGP 668
Score = 109 bits (272), Expect = 2e-23
Identities = 83/258 (32%), Positives = 96/258 (37%), Gaps = 2/258 (0%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G+ G G KG G G AG G PGP
Sbjct: 566 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKD---------------- 609
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+AG QGP G GP GE GE+G G+PG G G GP G G
Sbjct: 610 --GEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG------KPGEQGVPG 661
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G+ G G G +G G+PG G G+ G PGAPGS G G
Sbjct: 662 DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPG 721
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G G +G GL GP G G+ G RGL G IG G G PG
Sbjct: 722 LQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV------RGLTGPIGPPGPAGAPG 775
Query: 721 PPGQVKVRNP--PEGSSG 768
G+ P P G+ G
Sbjct: 776 DKGEAGPSGPAGPTGARG 793
Score = 92.4 bits (228), Expect = 3e-18
Identities = 66/202 (32%), Positives = 76/202 (37%), Gaps = 7/202 (3%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGI----VXXXXXXXXXXX 354
G G GP G GP G G G G PG+ G G GP GP G+
Sbjct: 108 GPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKS 167
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
L G G PG +G + G G PG GP+G +G PG PG G
Sbjct: 168 TGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGD 227
Query: 535 QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGN 714
G+ G G GE G GP G G G +G G G G PG+
Sbjct: 228 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS 287
Query: 715 P---GPPGQVKVRNPPEGSSGR 771
P G PGQ+ R P G GR
Sbjct: 288 PGENGAPGQMGPRGLP-GERGR 308
Score = 59.7 bits (143), Expect = 2e-08
Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Frame = +1
Query: 406 LDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGN----------- 552
++G G+ G +G R G G G G G G PG PG GP G GN
Sbjct: 106 VEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDE 165
Query: 553 -----------QGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
GP G GL GP G G G RG PG G
Sbjct: 166 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKN 225
Query: 700 GRPGNPGPPGQVKVRNP--PEGSSG 768
G G G PG+ R P P+G+ G
Sbjct: 226 GDDGEAGKPGRPGERGPPGPQGARG 250
Score = 53.5 bits (127), Expect = 2e-06
Identities = 38/104 (36%), Positives = 41/104 (39%)
Frame = +1
Query: 421 GEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVV 600
G G KG+ G G G GP G G PG PG GP G G GP G G P
Sbjct: 105 GVEGPKGDT---GPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSY 161
Query: 601 GEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQ 732
G D + RGLPG G G G GPPG+
Sbjct: 162 GYDEKSTGGISVPGPMGPSGP--RGLPGPPGAPGPQGFQGPPGE 203
Score = 48.1 bits (113), Expect = 7e-05
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = +1
Query: 478 TIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
T G G KGD G G GP G G G G+ GL GP G G G
Sbjct: 103 TTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYG 162
Query: 658 XXXNR----GLPGDIGDIGRPGNPGPPG 729
+PG +G G G PGPPG
Sbjct: 163 YDEKSTGGISVPGPMGPSGPRGLPGPPG 190
Score = 40.4 bits (93), Expect = 0.014
Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Frame = +1
Query: 457 GIMGSPGTIGPVGNKG-----DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXX 621
G PG PV G D G GP+G G +GP+G G G +G+ G+
Sbjct: 79 GAQVPPGECCPVCPDGEASPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQ----- 133
Query: 622 XXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGRYKRST 786
PG G G PG PGPPG + P+ S G ++ST
Sbjct: 134 -------------------PGLPGPPGPPGPPGPPG-LGGNFAPQMSYGYDEKST 168
Score = 31.2 bits (69), Expect = 8.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 86 TGPANPIGPISPFLPTGPCIPKSP 15
TGPA P GPI P GP P+ P
Sbjct: 1065 TGPAGPAGPIGPVGARGPAGPQGP 1088
>sp|P08121|CO3A1_MOUSE Collagen alpha 1(III) chain precursor Length = 1464 Score = 170 bits (431), Expect = 9e-42 Identities = 157/537 (29%), Positives = 212/537 (39%), Gaps = 32/537 (5%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G G LGI G G +G GP G+ GP GSPGP Sbjct: 939 PPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQG 998 Query: 181 LPGKAGLQGPAG--GN----------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324 LPG+ G G G GN G G G+RG+ G+PG G G GP GP+G Sbjct: 999 LPGQPGTAGEPGRDGNPGSDGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSG 1058 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504 G G+ G+ GER GI G G GN G Sbjct: 1059 KSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGF---PGNPG 1115 Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684 PG+PG+ G QG G+ GP G G +GP+G G+DG NRG G Sbjct: 1116 PPGSPGAAGHQGAIGSPGPAGPRGPVGPHGPPGKDG---TSGHPGPIGPPGPRGNRGERG 1172 Query: 685 DIGDIGRPGNPGPPGQVKVRNPPEGSS-------GRYKRSTRAQSFGD------IN-DAL 822 G G PG PGPPG P G G K + +GD IN + + Sbjct: 1173 SEGSPGHPGQPGPPGPPGAPGPCCGGGAAAIAGVGGEKSGGFSPYYGDDPMDFKINTEEI 1232 Query: 823 FEKVDKITNKIKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVE 1002 + + +I+ L P G K+ A R C D+K G Y++DPN+G D+I+V Sbjct: 1233 MSSLKSVNGQIESLISPDGSRKNPA-RNCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVF 1291 Query: 1003 CIFSEEDEVKTCLSSVKQLGGLYNYKKPMKGETN--WQNSLRLEGALTRA---PDLHSMY 1167 C + +TC+++ ++ E W + G + PDL Sbjct: 1292 C---NMETGETCINASPMTVPRKHWWTDSGAEKKHVWFGE-SMNGGFQFSYGPPDLPEDV 1347 Query: 1168 VDHTQMNFLRMQNSKSYQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKG 1347 VD Q+ FLR+ +S++ Q I + C S+ Y D KS+ L Sbjct: 1348 VD-VQLAFLRLLSSRASQNITYHCKNSIAYMDQASGNVK-------------KSLKL--- 1390 Query: 1348 ERLGPNEGYMDKRVYKNEFGRAIFNVTIEYDGCMYRT-PGSSSKFKLETTELSMLPI 1515 +G NEG +K E G + F T+ DGC T S + F+ +T + LPI Sbjct: 1391 --MGSNEG-----EFKAE-GNSKFTYTVLEDGCTKHTGEWSKTVFEYQTRKAMRLPI 1439
Score = 125 bits (315), Expect = 2e-28
Identities = 90/262 (34%), Positives = 99/262 (37%), Gaps = 5/262 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G G G KGE+GP G G GSPG
Sbjct: 333 PPGPPGTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGH----------------- 375
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G G GP G NG G GE G G PG G +G RGP GP G
Sbjct: 376 -AGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLIGARGPPGPAG--------------- 419
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
+G GEPG +GER G G PG G G G PG PG+ G G
Sbjct: 420 TNGIPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPG 479
Query: 541 KRGNQGPKGETGLMGPNGVVGE---DGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G +GP G G GPNG+ GE GE G PG G G PG
Sbjct: 480 AAGERGPSGFRGPAGPNGIPGEKGPPGERGGPGPAGPRGVAGEPGRDGTPGGPGIRGMPG 539
Query: 712 NPGPPGQVKVRNPP--EGSSGR 771
+PG PG PP +G SGR
Sbjct: 540 SPGGPGNDGKPGPPGSQGESGR 561
Score = 117 bits (292), Expect = 1e-25
Identities = 87/276 (31%), Positives = 104/276 (37%), Gaps = 20/276 (7%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G +G+ G G G G+ GP G AGP+G PGP
Sbjct: 738 PKGEKGEPGGAGADGVPGKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGPG 797
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+ G GPAG G G+ GE G +G G G GE GP GP G
Sbjct: 798 ERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGPAGPTGS----------- 846
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIG---------PVGNKGDPG 513
G G PG +G + +G G PGT G P GN G+PG
Sbjct: 847 ----------------SGPAGPPGPQGVKGERGSPGGPGTAGFPGGRGLPGPPGNNGNPG 890
Query: 514 ------APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
APG GP G GN G G G+ GP G G+ GE G
Sbjct: 891 PPGPSGAPGKDGPPGPAGNSGSPGNPGIAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAG 950
Query: 676 LPGDIGDIGRPGNPGPPGQ-----VKVRNPPEGSSG 768
L G G G PG PGP G +K + G+SG
Sbjct: 951 LTGARGLAGPPGMPGPRGSPGPQGIKGESGKPGASG 986
Score = 116 bits (290), Expect = 2e-25
Identities = 80/251 (31%), Positives = 92/251 (36%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G G G +G G G AGP G PGP
Sbjct: 183 PPGSSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGALGPAGPAGKDGESGRPGR----- 237
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG+ GL GP G GP G G G +G+ G G GE+G TG G+
Sbjct: 238 -PGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPG 296
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G G G G R G G PG G G G PGA G +GP G
Sbjct: 297 PMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG 356
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
G+ G G+ G GP G G G N G PG G++G G PG
Sbjct: 357 SPGSNGSPGQRGEPGPQGHAGAQG------------PPGPPGNNGSPGGKGEMGPAGIPG 404
Query: 721 PPGQVKVRNPP 753
PG + R PP
Sbjct: 405 APGLIGARGPP 415
Score = 114 bits (285), Expect = 7e-25
Identities = 81/264 (30%), Positives = 97/264 (36%), Gaps = 21/264 (7%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEI------------GPIGLAGPVGSPGPXXXXXXXXXXXXXX 144
P G G LG GP G+ GE GP G+ GP G PG
Sbjct: 213 PPGPPGALGPAGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPG---FPGMKGHRGFDG 269
Query: 145 XXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324
L G+ GL G G GP G G G+RG PG+ G G RG G G
Sbjct: 270 RNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDG 329
Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504
G G PGQ+GE +G G+ G GP GN G
Sbjct: 330 QPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNG 389
Query: 505 DPGAPGSIGPQ---------GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
PG G +GP G RG GP G G+ G G GE G+
Sbjct: 390 SPGGKGEMGPAGIPGAPGLIGARGPPGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERG 449
Query: 658 XXXNRGLPGDIGDIGRPGNPGPPG 729
+ G+PG G+ G+ G+PG PG
Sbjct: 450 EAGSPGIPGPKGEDGKDGSPGEPG 473
Score = 114 bits (285), Expect = 7e-25
Identities = 89/278 (32%), Positives = 102/278 (36%), Gaps = 24/278 (8%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KGE GP G AGP GS GP P
Sbjct: 818 GEPGAKGERGAPGEKGEGGPPGPAGPTGSSGPAGP------------------------P 853
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G++G G G G AG G RG PG GN G GP GP G
Sbjct: 854 GPQGVKGERGSPGGPGTAGFPGGRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPAGNSGSP 913
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTI--------------------- 483
G G+PG+KG +G GSPG +
Sbjct: 914 GNPGIAGPK------GDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPR 967
Query: 484 ---GPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXX 654
GP G KG+ G PG+ G G+RG GP+G G G G G DG
Sbjct: 968 GSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQPGRDGSP 1027
Query: 655 XXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSG 768
+RG G G G PG+PGPPG V P G SG
Sbjct: 1028 GGKGDRGENGSPGAPGAPGHPGPPGPV----GPSGKSG 1061
Score = 112 bits (280), Expect = 3e-24
Identities = 87/265 (32%), Positives = 99/265 (37%), Gaps = 9/265 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIG---PIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
PQG +GD G G GR G+ G GL GP GSPG
Sbjct: 105 PQGPKGDPGPPGIPGRNGDPGLPGQPGLPGPPGSPGICESCPTGGQNYSPQFDSYDVKSG 164
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
+ G G GP G GP G +G G G+PG G GE G GP G
Sbjct: 165 VGGMGGYPGPAGPPGPPGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAG------------ 212
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
DG+ G PG+ GER G+ G PG GP G G PG G G
Sbjct: 213 ---PPGPPGALGPAGPAGKDGESGRPGRPGER---GLPGPPGIKGPAGMPGFPGMKGHRG 266
Query: 532 PQGKRGNQGP------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
G+ G +G KGE GL G NG G G RG G G
Sbjct: 267 FDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 326
Query: 694 DIGRPGNPGPPGQVKVRNPPEGSSG 768
G+PG PGPPG P G+ G
Sbjct: 327 SDGQPGPPGPPGTAGFPGSP-GAKG 350
Score = 112 bits (279), Expect = 4e-24
Identities = 88/279 (31%), Positives = 100/279 (35%), Gaps = 23/279 (8%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG++G G GP G G+ G G G VG+PG
Sbjct: 636 PQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGAR- 694
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G AG GP GG GP G G G G+PG+ G GERG G G
Sbjct: 695 --GGAGPPGPEGGKGPAGPPGPPGASGSPGLQGMPGERGGPGSPGPKGEKGEPGGAGADG 752
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGI---------MGSPGTIGPVGNKGDPG 513
G G+PG KGE G+ G G GP G G PG
Sbjct: 753 VPGKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGPGERGEHGPPGPAGFPG 812
Query: 514 APGSIGPQGKRGNQ------------GPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
APG G G +G + GP G TG GP G G G
Sbjct: 813 APGQNGEPGAKGERGAPGEKGEGGPPGPAGPTGSSGPAGPPGPQGVKGERGSPGGPGTAG 872
Query: 658 XXXNRGLPGDIGDIGRPGNPGPPGQVKVRNP--PEGSSG 768
RGLPG G+ G PG PGP G P P G+SG
Sbjct: 873 FPGGRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPAGNSG 911
Score = 108 bits (270), Expect = 4e-23
Identities = 81/252 (32%), Positives = 94/252 (37%), Gaps = 9/252 (3%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G+ GP G+ GE GP G GP G G L
Sbjct: 595 RGGPGGPGLPGPAGKNGETGPQGPPGPTGPAGDKGDSGPPGPQG---------------L 639
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMG------ERGPTGPIGIVXXXXXXXX 345
G G GP G NG GE G +G+ G PG G G ERGP G GI
Sbjct: 640 QGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGARGGAGP 699
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGI---MGSPGTIGPVGNKGDPGA 516
G G PG G L+G+ G PG+ GP G KG+PG
Sbjct: 700 PGPEGGKGPA------------GPPGPPGASGSPGLQGMPGERGGPGSPGPKGEKGEPGG 747
Query: 517 PGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
G+ G GK G +GP G G GP G G+ GE RG G G
Sbjct: 748 AGADGVPGKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGPGERGEHGPPGP 807
Query: 697 IGRPGNPGPPGQ 732
G PG PG G+
Sbjct: 808 AGFPGAPGQNGE 819
Score = 105 bits (263), Expect = 3e-22
Identities = 78/262 (29%), Positives = 91/262 (34%), Gaps = 8/262 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G G +GP G +G GP G+ G G PG +
Sbjct: 476 GLPGAAGERGPSGFRGPAGPNGIPGEKGPPGERGGPGPAGPRGVAGEPGRDGTPGGPGIR 535
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G +G G G +G+ G PG G G RG G +G
Sbjct: 536 GMPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPK------------ 583
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG+ GER G G PG G G G G PG GP G +
Sbjct: 584 ---------------GNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGPAGDK 628
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G+ GP G GL G G G GE G PG GD G PG GPP
Sbjct: 629 GDSGPPGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAP---GAPGGKGDSGAPGERGPP 685
Query: 727 GQVKVRNP--------PEGSSG 768
G + PEG G
Sbjct: 686 GTAGIPGARGGAGPPGPEGGKG 707
Score = 104 bits (259), Expect = 8e-22
Identities = 88/272 (32%), Positives = 99/272 (36%), Gaps = 15/272 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G+ G GP G GP G G +G PGP
Sbjct: 552 PPGSQGESGRPGP---PGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGG----------- 597
Query: 181 LPGKAGLQGPAGGN---------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
PG GL GPAG N GP G AG++GD G PG G G G GP G
Sbjct: 598 -PGGPGLPGPAGKNGETGPQGPPGPTGPAGDKGDSGPPGPQGLQGIPGTGGPPG------ 650
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFL------KGIMGSPGTIGPVG 495
+GK GEPG KGE KG G+PG GP G
Sbjct: 651 ------------------------ENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPG 686
Query: 496 NKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
G PGA G GP G G +GP G GP G G G +G
Sbjct: 687 TAGIPGARGGAGPPGPEGGKGPAGPP---GPPGASGSPGLQGMPGERGGPGSPGPKGEKG 743
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGR 771
PG G G PG GP G PP G +G+
Sbjct: 744 EPGGAGADGVPGKDGPRGPAGPIGPP-GPAGQ 774
Score = 103 bits (258), Expect = 1e-21
Identities = 85/285 (29%), Positives = 95/285 (33%), Gaps = 30/285 (10%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G G G G G+ GP G G G PGP P
Sbjct: 533 GIRGMPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQ------------------P 574
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGI---VGNMGERGPTGPIGIVXXXXXXXXXXXX 357
G G GP G +G G+ GERG G PG+ G GE GP GP G
Sbjct: 575 GVMGFPGPKGNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGPAGDKGDSGPP 634
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFL------KGIMGSPGTIGPVGNKGDPGAP 519
+GK GEPG KGE KG G+PG GP G G PGA
Sbjct: 635 GPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGAR 694
Query: 520 GSIGPQGKRGNQGP---------------------KGETGLMGPNGVVGEDGEXXXXXXX 636
G GP G G +GP +G G GP G GE G
Sbjct: 695 GGAGPPGPEGGKGPAGPPGPPGASGSPGLQGMPGERGGPGSPGPKGEKGEPGGAGADGVP 754
Query: 637 XXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGR 771
G PG G G G G PG + P G R
Sbjct: 755 GKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGPGER 799
Score = 84.7 bits (208), Expect = 6e-16
Identities = 67/201 (33%), Positives = 74/201 (36%), Gaps = 5/201 (2%)
Frame = +1
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
LP G QGP G GP G G GD PG+ G G GP G GI
Sbjct: 99 LPDGHGPQGPKGDPGPPGIPGRNGD---PGLPGQPGLPGPPGSPGICESCPTGGQNYSPQ 155
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG G G G PG+ G G +G PG PG GP G
Sbjct: 156 FDSYDVKSGVGGMGGYPGPAGPPGPPGP---PGSSGHPGSPGSPGYQGPPGEPGQAGPAG 212
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
P G G +GP G G+DGE RGLPG G G G PG
Sbjct: 213 ------PPGPPGALGPAGPAGKDGE---------SGRPGRPGERGLPGPPGIKGPAGMPG 257
Query: 721 PPGQ-----VKVRNPPEGSSG 768
PG RN +G +G
Sbjct: 258 FPGMKGHRGFDGRNGEKGETG 278
Score = 37.7 bits (86), Expect = 0.089
Identities = 26/89 (29%), Positives = 31/89 (34%), Gaps = 15/89 (16%)
Frame = +1
Query: 508 PGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR----- 672
P P GPQG +G+ GP G G G G+ G+ G
Sbjct: 97 PVLPDGHGPQGPKGDPGPPGIPGRNGDPGLPGQPGLPGPPGSPGICESCPTGGQNYSPQF 156
Query: 673 ----------GLPGDIGDIGRPGNPGPPG 729
G+ G G G PG PGPPG
Sbjct: 157 DSYDVKSGVGGMGGYPGPAGPPGPPGPPG 185
Score = 33.9 bits (76), Expect = 1.3
Identities = 30/108 (27%), Positives = 34/108 (31%)
Frame = -3
Query: 728 PGGPGFPGLPISPISXXXXXXXXXXXXXXXXXXPAEPDSPSSPTTPFGPMRPVSXXXXXX 549
PG GFPG P P P+ PT GP P
Sbjct: 805 PGPAGFPGAP----GQNGEPGAKGERGAPGEKGEGGPPGPAGPTGSSGPAGPPGPQGVKG 860
Query: 548 XXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFKNLSPFCPGSPTLPSK 405
PG PG+ FP G +PG P N +P PG P K
Sbjct: 861 ERG-----SPGGPGTAGFPGGRGLPGP---PGNNGNPGPPGPSGAPGK 900
>sp|P13941|CO3A1_RAT Collagen alpha 1(III) chain precursor Length = 636 Score = 169 bits (429), Expect = 2e-41 Identities = 156/536 (29%), Positives = 212/536 (39%), Gaps = 31/536 (5%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G G LGI G G +G GP G+ GP GSPGP Sbjct: 112 PPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQG 171 Query: 181 LPGKAGLQGPAG--GN----------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324 LPG+ G G G GN G G G+RG+ G+PG G G GP GP+G Sbjct: 172 LPGQPGTAGEPGRDGNPGSDGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSG 231 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504 G G+ G+ GER GI G G GN G Sbjct: 232 KNGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGF---PGNPG 288 Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684 PG+PG+ G QG G+ GP G G +GP+G G+DG NRG G Sbjct: 289 PPGSPGAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGS---SGHPGPIGPPGPRGNRGERG 345 Query: 685 DIGDIGRPGNPGPPGQVKVRNPPEGSS------GRYKRSTRAQSFGD------IN-DALF 825 G G PG PGPPG P G G K + +GD IN + + Sbjct: 346 SEGSPGHPGQPGPPGPPGAPGPCCGGGAAIAGVGGEKSGGFSPYYGDDPMDFKINTEEIM 405 Query: 826 EKVDKITNKIKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVEC 1005 + + +I+ L P G K+ A R C D+K G Y++DPN+G D+I+V C Sbjct: 406 SSLKSVNGQIESLISPDGSRKNPA-RNCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVFC 464 Query: 1006 IFSEEDEVKTCLSSVKQLGGLYNYKKPMKGETN--WQNSLRLEGALTRA---PDLHSMYV 1170 + +TC+++ ++ E W + G + PDL + Sbjct: 465 ---NMETGETCINASPMTVPRKHWWTDAGAEKKHVWFGE-SMNGGFQFSYGNPDLPEDVL 520 Query: 1171 DHTQMNFLRMQNSKSYQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKGE 1350 D Q+ FLR+ +S++ Q I + C S+ Y D KS+ L Sbjct: 521 D-VQLAFLRLLSSRASQNITYHCKNSIAYMDQANGNVK-------------KSLKL---- 562 Query: 1351 RLGPNEGYMDKRVYKNEFGRAIFNVTIEYDGCMYRT-PGSSSKFKLETTELSMLPI 1515 +G NEG +K E G + F T+ DGC T S + F+ +T + LPI Sbjct: 563 -MGSNEG-----EFKAE-GNSKFTYTVLEDGCTKHTGEWSKTVFEYQTRKAMRLPI 611
Score = 122 bits (305), Expect = 4e-27
Identities = 89/265 (33%), Positives = 101/265 (38%), Gaps = 11/265 (4%)
Frame = +1
Query: 7 GVEGDLGIQGP---VGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G G+ G+ GP G+ GE GP G GP GSPGP
Sbjct: 84 GSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGSPGP---------------------LGIA 122
Query: 178 XLPGKAGLQGPAGGNGPQGEAGE---RGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXX 348
L G GL GP G GP+G G +G+ G PG G+ GERGP GP G+
Sbjct: 123 GLTGARGLAGPPGMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEP 182
Query: 349 XXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI 528
G GE G G G G PG +GP G GD G G
Sbjct: 183 GRDGNPGSDGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPA 242
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD---I 699
GP G G G +G G GP G GE GE G PG G +
Sbjct: 243 GPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAV 302
Query: 700 GRPGNPGPPGQVKVRNPP--EGSSG 768
G PG GP G V PP +GSSG
Sbjct: 303 GSPGPAGPRGPVGPHGPPGKDGSSG 327
Score = 110 bits (275), Expect = 1e-23
Identities = 84/264 (31%), Positives = 92/264 (34%), Gaps = 21/264 (7%)
Frame = +1
Query: 1 PQGVEGD---------------LGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXX 135
PQGV+G+ G+ GP G G GP G +G G GP
Sbjct: 28 PQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPAGNSGSPG 87
Query: 136 XXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIG 315
G G QGP G GP G AG G RG G G G RG GP G
Sbjct: 88 NPGVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQG 147
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG 495
I G+ G G G G GSPG G G
Sbjct: 148 IKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQPGRDGSPGGKGDRG 207
Query: 496 NKGDPGAPGS------IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
G PGAPG+ GP G G G +GETG GP+G G G
Sbjct: 208 ENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKG 267
Query: 658 XXXNRGLPGDIGDIGRPGNPGPPG 729
RG G G G PGNPGPPG
Sbjct: 268 ETGERGSNGIKGHRGFPGNPGPPG 291
Score = 107 bits (268), Expect = 7e-23
Identities = 80/249 (32%), Positives = 90/249 (36%), Gaps = 6/249 (2%)
Frame = +1
Query: 43 GRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGN 222
G KGE GP G AGP G GP PG G++G G
Sbjct: 3 GEKGEGGPPGAAGPPGGSGPAGP------------------------PGPQGVKGERGSP 38
Query: 223 GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXX 402
G G AG G RG PG GN G GP GP G
Sbjct: 39 GGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPA------------------ 80
Query: 403 XLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGL- 579
G G PG G KG G PG GP G +G PG+PG +G G G +G G G+
Sbjct: 81 ---GNSGSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMP 137
Query: 580 -----MGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVR 744
GP G+ GE G+ G PG G+ GR GNPG GQ
Sbjct: 138 GPRGSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQPGRD 197
Query: 745 NPPEGSSGR 771
P G R
Sbjct: 198 GSPGGKGDR 206
Score = 70.9 bits (172), Expect = 9e-12
Identities = 47/123 (38%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +1
Query: 427 PGQKGERFLKGIMGSPGTIGPV---------GNKGDPGAPGSIGPQGKRGNQGPKGETGL 579
PG+KGE G G PG GP G +G PG PG+ G G RG GP G G
Sbjct: 2 PGEKGEGGPPGAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGN 61
Query: 580 MGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEG 759
GP G G G+ N G+ G GD G+PG GPPG + PP G
Sbjct: 62 PGPPGPSGAPGK---DGPPGPAGNSGSPGNPGVAGPKGDAGQPGEKGPPG---AQGPP-G 114
Query: 760 SSG 768
S G
Sbjct: 115 SPG 117
Score = 60.1 bits (144), Expect = 2e-08
Identities = 40/102 (39%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 469 SPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXX 648
+PG G G G G PG GP G G QG KGE G G G G G
Sbjct: 1 APGEKGEGGPPGAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPG------------ 48
Query: 649 XXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNP--PEGSSG 768
RGLPG G+ G PG PGP G P P G+SG
Sbjct: 49 ------GRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPAGNSG 84
>sp|P02461|CO3A1_HUMAN Collagen alpha 1(III) chain precursor Length = 1466 Score = 169 bits (429), Expect = 2e-41 Identities = 160/538 (29%), Positives = 210/538 (39%), Gaps = 33/538 (6%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G G LGI G G +G GP G+ GP GSPGP Sbjct: 940 PPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQG 999 Query: 181 LPGKAGLQGPAG--GN----------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324 LPG AG G G GN G G G+RG+ G+PG G G GP GP+G Sbjct: 1000 LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG 1059 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504 G G+ G+ GER GI G G GN G Sbjct: 1060 KSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGF---PGNPG 1116 Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684 PG+PG G QG G+ GP G G +GP+G G+DG NRG G Sbjct: 1117 APGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDG---TSGHPGPIGPPGPRGNRGERG 1173 Query: 685 DIGDIGRPGNPGPPGQVKVRNPPEGSSGR--------YKRSTRAQSFGD------IN-DA 819 G G PG PGPPG P G G K A +GD IN D Sbjct: 1174 SEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAPYYGDEPMDFKINTDE 1233 Query: 820 LFEKVDKITNKIKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEV 999 + + + +I+ L P G K+ A R C D+K G Y++DPN+G D+I+V Sbjct: 1234 IMTSLKSVNGQIESLISPDGSRKNPA-RNCRDLKFCHPELKSGEYWVDPNQGCKLDAIKV 1292 Query: 1000 ECIFSEEDEVKTCLSSVKQLGGLYNYKKPMKGETN--WQNSLRLEGALTRA---PDLHSM 1164 C + +TC+S+ ++ E W ++G + P+L Sbjct: 1293 FC---NMETGETCISANPLNVPRKHWWTDSSAEKKHVWFGE-SMDGGFQFSYGNPELPED 1348 Query: 1165 YVDHTQMNFLRMQNSKSYQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSK 1344 +D Q+ FLR+ +S++ Q I + C S+ Y D K A LM Sbjct: 1349 VLD-VQLAFLRLLSSRASQNITYHCKNSIAYMD---QASGNVKKALKLM----------- 1393 Query: 1345 GERLGPNEGYMDKRVYKNEFGRAIFNVTIEYDGCMYRT-PGSSSKFKLETTELSMLPI 1515 G NEG +K E G + F T+ DGC T S + F+ T + LPI Sbjct: 1394 ----GSNEG-----EFKAE-GNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLPI 1441
Score = 125 bits (313), Expect = 4e-28
Identities = 92/265 (34%), Positives = 102/265 (38%), Gaps = 8/265 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G G G KGE+GP G G G+PG
Sbjct: 334 PPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQ------------------- 374
Query: 181 LPGKAGLQGPAGG---NGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G AG QGP G NG G GE G G PG G MG RGP GP G
Sbjct: 375 --GHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGA----------- 421
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+G GEPG +GER GI G PG G G G PG PG+ G
Sbjct: 422 ----NGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANG 477
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGED---GEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G G +G G G GPNG+ GE GE G+PG G G
Sbjct: 478 LPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRG 537
Query: 703 RPGNPGPPGQVKVRNPP--EGSSGR 771
PG+PG PG PP +G SGR
Sbjct: 538 MPGSPGGPGSDGKPGPPGSQGESGR 562
Score = 118 bits (295), Expect = 5e-26
Identities = 105/341 (30%), Positives = 119/341 (34%), Gaps = 30/341 (8%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G GI GP G GE G G GP G PG +
Sbjct: 783 GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVA 842
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERG---PTGPIGIVXXXXXXXXXXXX 357
G G GPAG GPQG GERG G PG G G RG P G G
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKD 902
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA------P 519
+ G G+ GQ GE+ G G PG GP+G G GA P
Sbjct: 903 GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGE---------------------DGEXXXXXXX 636
G GP+G G QG KGE+G G NG+ GE DG
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLP 1022
Query: 637 XXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGRYKRSTRAQSFGDIND 816
+RG G G G PG+PGPPG V P G SG S A G
Sbjct: 1023 GRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPV----GPAGKSGDRGESGPAGPAGAPGP 1078
Query: 817 ALFEKVDKITNKIKKLRFPTGLNKDSATRTCADIKSHRKSP 939
A + + P G ++ R A IK HR P
Sbjct: 1079 A-------GSRGAPGPQGPRGDKGETGERGAAGIKGHRGFP 1112
Score = 115 bits (287), Expect = 4e-25
Identities = 79/249 (31%), Positives = 92/249 (36%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G QGP G G+ GP G GP G+ GP P
Sbjct: 192 GSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGR------------P 239
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G+ GL GP G GP G G G +G+ G G GE+G TG G+
Sbjct: 240 GERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPM 299
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
L G G G G R G G PG G G G PGA G +GP G
Sbjct: 300 GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G+ G G+ G GP G G G G PG G++G G PG P
Sbjct: 360 GSNGAPGQRGEPGPQGHAGAQGPPGPPGI------------NGSPGGKGEMGPAGIPGAP 407
Query: 727 GQVKVRNPP 753
G + R PP
Sbjct: 408 GLMGARGPP 416
Score = 114 bits (286), Expect = 6e-25
Identities = 82/260 (31%), Positives = 94/260 (36%), Gaps = 9/260 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G G G G KGE GP G G G PG
Sbjct: 426 GLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER 485
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G +GPAG NG GE G G+RG PG G G G G G+
Sbjct: 486 GAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGP 545
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPG------TIGPVGNKGDPGAPGSI 528
G+ G PG G R G+MG PG G G +G PG PG
Sbjct: 546 GSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ 605
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP---GDIGDI 699
GP GK G GP+G G GP G G+ G +GLP G G+
Sbjct: 606 GPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGL------------QGLPGTGGPPGEN 653
Query: 700 GRPGNPGPPGQVKVRNPPEG 759
G+PG PGP G P G
Sbjct: 654 GKPGEPGPKGDAGAPGAPGG 673
Score = 114 bits (285), Expect = 7e-25
Identities = 84/257 (32%), Positives = 96/257 (37%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G G GP G G GP G G G PGP
Sbjct: 604 PQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGP------------------------QG 639
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G G GP G NG GE G +GD G PG G G+ G G G
Sbjct: 640 LQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG +G +G +GSP GP G+KG+PG PG+ G G
Sbjct: 700 PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSP---GPKGDKGEPGGPGADGVPG 756
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
K G +GP G G GP G G+ GE RG PG+ G+ G PG G
Sbjct: 757 KDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGP------RGSPGERGETGPPGPAG 810
Query: 721 PPGQVKVRNPPEGSSGR 771
PG P G R
Sbjct: 811 FPGAPGQNGEPGGKGER 827
Score = 111 bits (278), Expect = 5e-24
Identities = 83/270 (30%), Positives = 101/270 (37%), Gaps = 14/270 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGP------IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXX 162
P+G G +G GP G+ G+ G G+AGP GSPG
Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAG--------- 810
Query: 163 XXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
PG G G GG G +G GE+G+ G PG+ G G GP GP G
Sbjct: 811 ------FPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPG--------- 855
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG--- 513
+ G+ G PG G G G PG G GN G PG
Sbjct: 856 ------------------PQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSG 897
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
+PG GP G GN G G G+ GP G G+ GE G+ G G
Sbjct: 898 SPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARG 957
Query: 694 DIGRPGNPGPPGQ-----VKVRNPPEGSSG 768
G PG PGP G VK + G++G
Sbjct: 958 LAGPPGMPGPRGSPGPQGVKGESGKPGANG 987
Score = 109 bits (272), Expect = 2e-23
Identities = 87/267 (32%), Positives = 98/267 (36%), Gaps = 11/267 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGP-----XXXXXXXXXXXXXXXXXXXXX 165
PQG +GD G G GR G+ G G G GSPGP
Sbjct: 104 PQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSG 163
Query: 166 XXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
L G G GP G GP G +G G G+PG G GE G GP G
Sbjct: 164 VAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSG---------- 213
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
DG+ G PG+ GER G+ G PG GP G G PG G
Sbjct: 214 -----PPGPPGAIGPSGPAGKDGESGRPGRPGER---GLPGPPGIKGPAGIPGFPGMKGH 265
Query: 526 IGPQGKRGNQGP------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGD 687
G G+ G +G KGE GL G NG G G RG G
Sbjct: 266 RGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGA 325
Query: 688 IGDIGRPGNPGPPGQVKVRNPPEGSSG 768
G G+PG PGPPG P G+ G
Sbjct: 326 RGSDGQPGPPGPPGTAGFPGSP-GAKG 351
Score = 108 bits (269), Expect = 5e-23
Identities = 82/253 (32%), Positives = 97/253 (38%)
Frame = +1
Query: 10 VEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 189
V G G GP G G GP G +G GSPG PG
Sbjct: 166 VGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGE------------------PG 207
Query: 190 KAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXX 369
+AG GP G G G +G G G G G GERG GP GI
Sbjct: 208 QAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 267
Query: 370 XXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRG 549
G+ G PG KGE L G G+PG +GP G G+ G PG G G RG
Sbjct: 268 FDGRNGEK------GETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARG 321
Query: 550 NQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPG 729
N G +G G GP G G G + G G++G G PG+ G PG
Sbjct: 322 NDGARGSDGQPGPPGPPGTAG---------------FPGSPGAKGEVGPAGSPGSNGAPG 366
Query: 730 QVKVRNPPEGSSG 768
Q + P+G +G
Sbjct: 367 Q-RGEPGPQGHAG 378
Score = 105 bits (261), Expect = 5e-22
Identities = 83/259 (32%), Positives = 100/259 (38%), Gaps = 3/259 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G+ G GP G GP G G +G PGP
Sbjct: 553 PPGSQGESGRPGP---PGPSGPRGQPGVMGFPGP---------------------KGNDG 588
Query: 181 LPGKAGLQGPAGGNGPQ---GEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PGK G +G GG GPQ G+ GE G +G PG G G++G TGP G
Sbjct: 589 APGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPG------------ 636
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+GK GEPG KG+ G G G G G +G PG G+ G
Sbjct: 637 ---PQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPG 693
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
+G G GP+G G GP G G G G PG GD G PG
Sbjct: 694 LRGGAGPPGPEGGKGAAGPPGPPGAAG------TPGLQGMPGERGGLGSPGPKGDKGEPG 747
Query: 712 NPGPPGQVKVRNPPEGSSG 768
PG G V ++ P G +G
Sbjct: 748 GPGADG-VPGKDGPRGPTG 765
Score = 86.3 bits (212), Expect = 2e-16
Identities = 68/200 (34%), Positives = 76/200 (38%), Gaps = 5/200 (2%)
Frame = +1
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
P G QGP G GP G G GD PGI G G G GP GI
Sbjct: 99 PNGQGPQGPKGDPGPPGIPGRNGD---PGIPGQPGSPGSPGPPGI----CESCPTGPQNY 151
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
+ G G PG G G G PGT G G+ G PG G G G+
Sbjct: 152 SPQYDSYDVKSGVAVGGLAGYPGPAGP---PGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGP 723
G GP G G +GP+G G+DGE RGLPG G G G PG
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGE---------SGRPGRPGERGLPGPPGIKGPAGIPGF 259
Query: 724 PGQ-----VKVRNPPEGSSG 768
PG RN +G +G
Sbjct: 260 PGMKGHRGFDGRNGEKGETG 279
Score = 57.0 bits (136), Expect = 1e-07
Identities = 46/145 (31%), Positives = 53/145 (36%), Gaps = 25/145 (17%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG-----SIGPQ------------- 537
G G+PG G + G G PG G G+ G PG PG GPQ
Sbjct: 106 GPKGDPGPPG---IPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKS 162
Query: 538 -----GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G G GP G G GP G G G +G PG+ G G
Sbjct: 163 GVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGY------------QGPPGEPGQAG 210
Query: 703 RPGNPGPPGQVKVRNP--PEGSSGR 771
G PGPPG + P +G SGR
Sbjct: 211 PSGPPGPPGAIGPSGPAGKDGESGR 235
Score = 38.5 bits (88), Expect = 0.052
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P +G QGPKG+ GP G+ G +G+ PG G G PG
Sbjct: 98 PPNGQGPQGPKGDP---GPPGIPGRNGD---------------------PGIPGQPGSPG 133
Query: 712 NPGPPG 729
+PGPPG
Sbjct: 134 SPGPPG 139
Score = 33.5 bits (75), Expect = 1.7
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 9/129 (6%)
Frame = -3
Query: 620 PDSPSSPTTP---FGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFK 450
P P++PT P GP P +PG PG P P +PG+P P
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKG--------------DPGPPGIPGRNGDPGIPGQPGSPGS 134
Query: 449 NLSP-FCPGSPTLPS----KXXXXXXXXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPLS- 288
P C PT P + +PG P+GP P GP G
Sbjct: 135 PGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPG----PAGPPGPPGPPGTSGH 190
Query: 287 PILPTIPGF 261
P P PG+
Sbjct: 191 PGSPGSPGY 199
Score = 32.3 bits (72), Expect = 3.7
Identities = 44/167 (26%), Positives = 50/167 (29%), Gaps = 6/167 (3%)
Frame = -3
Query: 767 PDDPSGGFLTLTCPGGPGFPGLPISPISXXXXXXXXXXXXXXXXXXPAEPDSPSSPTTP- 591
P P G PG PG PG P P +P SP SP P
Sbjct: 104 PQGPKGD------PGPPGIPGRNGDP------------------GIPGQPGSPGSPGPPG 139
Query: 590 ---FGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFKNLSPFCPGSP 420
P P + + G P GP PG P P + P PGSP
Sbjct: 140 ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGP--PGPPGPPGTSGHPGSPGSP 197
Query: 419 TLPSKXXXXXXXXXXXXXXXPDWPGCPLE--PSGPTIPIGPVGPLSP 285
PG P + PSGP P G +GP P
Sbjct: 198 GYQGP------------------PGEPGQAGPSGPPGPPGAIGPSGP 226
>sp|O46392|CO1A2_CANFA Collagen alpha 2(I) chain precursor Length = 1366 Score = 169 bits (429), Expect = 2e-41 Identities = 156/537 (29%), Positives = 213/537 (39%), Gaps = 34/537 (6%) Frame = +1 Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186 G G+ G+ G G GE GP+G+AGP G+ GP P Sbjct: 877 GSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGAVGAPGVNGA---------------P 921 Query: 187 GKAGLQGPAGGNGP---QGEAGERGDRGNPGIVGNMGE------RGPTGPIGIVXXXXXX 339 G+AG G G +GP G+AG +G+RG PG +G +G GP GP G Sbjct: 922 GEAGRDGNPGNDGPPGRDGQAGHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEP 981 Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGS---PGTIGPVGNKGDP 510 + G GEPG+KG R L G+ G G G G GD Sbjct: 982 GPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGLAGQHGDQ 1041 Query: 511 GAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI 690 GAPGS+GP G RG GP G G G G G G RG G Sbjct: 1042 GAPGSVGPAGPRGPAGPSGPAGKDGRTGQPGTVGPAGI---------------RGSQGSQ 1086 Query: 691 GDIGRPGNPGPPGQVKVRNPPEGSSGRYK--------RSTRAQSFGDINDALFE---KVD 837 G G PG PGPPG PP S G Y R+ + +S + +E + Sbjct: 1087 GPAGPPGPPGPPG------PPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATLK 1140 Query: 838 KITNKIKKLRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVECIFSE 1017 + N+I+ L P G K+ A RTC D++ G Y+IDPN+G D+I+V C FS Sbjct: 1141 SLNNQIETLLTPEGSRKNPA-RTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST 1199 Query: 1018 EDEVKTCLSSVKQLGGLYNYKKPMK-------GET---NWQNSLRLEGALTRAPDLHSMY 1167 + TC+ + + N+ + K GET Q +EG T+ Sbjct: 1200 GE---TCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNVEGVTTKEM------ 1250 Query: 1168 VDHTQMNFLRMQNSKSYQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKG 1347 TQ+ F+R+ + + Q I + C S+ Y D E K A +L Sbjct: 1251 --ATQLAFMRLLANHASQNITYHCKNSIAYMD---EETGNLKKAVIL------------- 1292 Query: 1348 ERLGPNEGYMDKRVYKNEFGRAIFNVTIEYDGCMYRT-PGSSSKFKLETTELSMLPI 1515 +G D + G + F T+ DGC +T + + +T + S LPI Sbjct: 1293 ------QGSNDVELVAE--GNSRFTYTVLVDGCSKKTNEWRKTIIEYKTNKPSRLPI 1341
Score = 125 bits (314), Expect = 3e-28
Identities = 87/264 (32%), Positives = 105/264 (39%), Gaps = 8/264 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGR---KGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
PQGV+G G QGP G +G GP G AG VG PG
Sbjct: 536 PQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPG 595
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G AG GP G GP G G G++G PG++G G G +GP G+
Sbjct: 596 ES---GAAGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGGL---------PG 643
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
L G++G PG+ G R G MG+PG G G++G+ G G G
Sbjct: 644 ERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAMGAPGPAGATGDRGEAGPAGPAG 703
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR-- 705
P G RG G +GE G GPNG G G G G G IG
Sbjct: 704 PAGPRGTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPIGSAG 763
Query: 706 PGNP-GPPGQVKVRNP--PEGSSG 768
P P GPPG R P G++G
Sbjct: 764 PSGPNGPPGPAGSRGDGGPPGATG 787
Score = 119 bits (299), Expect = 2e-26
Identities = 88/269 (32%), Positives = 105/269 (39%), Gaps = 14/269 (5%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G QGP G GE G G G GS GP
Sbjct: 360 KGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGP 419
Query: 184 PGKAGLQGPAGGNGPQGEAGERGD------RGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
PG G GPAG GP G++G G+ RG PG GN+G G GP+G+
Sbjct: 420 PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP 479
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
G G+PG+ G++ G+ G+ G GP GN G G PG
Sbjct: 480 IGPAGARGEPGNIGFPGPK---GPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGP 536
Query: 526 IGPQGKRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI-- 690
G QG +G QGP G GL GP G GE G+ RGLPG+
Sbjct: 537 QGVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGK---------------PGERGLPGEFGL 581
Query: 691 -GDIGRPGNPGPPGQVKVRNP--PEGSSG 768
G G G GPPG+ P P GS G
Sbjct: 582 PGPAGPRGERGPPGESGAAGPSGPIGSRG 610
Score = 116 bits (291), Expect = 2e-25
Identities = 85/272 (31%), Positives = 103/272 (37%), Gaps = 15/272 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGP---VGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G EG +G+ G GR G IGP G G +G PGP
Sbjct: 461 PAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGD----------- 509
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G AGL G G GP G G +G G G+ G GE+GP GP G
Sbjct: 510 ----KGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPA---- 561
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G GE G+ GER L G G PG GP G +G PG G+ G
Sbjct: 562 --------------------GTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAG 601
Query: 532 PQGKRGNQGP---------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR---G 675
P G G++GP KGE G++G G G G + G
Sbjct: 602 PSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGGLPGERGAAGIPGGKGEKGETG 661
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGR 771
L G+IG+ GR G G PG + P + R
Sbjct: 662 LRGEIGNPGRDGARGAPGAMGAPGPAGATGDR 693
Score = 116 bits (291), Expect = 2e-25
Identities = 82/257 (31%), Positives = 94/257 (36%), Gaps = 2/257 (0%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G GE G +G AGP G GP
Sbjct: 697 GPAGPAGPAGPRGTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPT 756
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G GP+G NGP G AG RGD G PG G G G TGP G
Sbjct: 757 GPIGSAGPSGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPG----------------- 799
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
+ G G PG G+ L+G G G +G G G G PG G +G
Sbjct: 800 ----------PSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPPGFTGEKGPS 849
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G G G GP G++G G + G PG +G G PG GPP
Sbjct: 850 GEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPP 909
Query: 727 GQVKVR--NPPEGSSGR 771
G V N G +GR
Sbjct: 910 GAVGAPGVNGAPGEAGR 926
Score = 115 bits (289), Expect = 3e-25
Identities = 87/274 (31%), Positives = 99/274 (36%), Gaps = 24/274 (8%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G+ G G G G GPIG GP G PGP
Sbjct: 584 PAGPRGERGPPGESGAAGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGG--- 640
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPG------------------IVGNMGERGPTG 306
LPG+ G G GG G +GE G RG+ GNPG G+ GE GP G
Sbjct: 641 LPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAMGAPGPAGATGDRGEAGPAG 700
Query: 307 PIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTI- 483
P G G G+PG KGER KG G G +
Sbjct: 701 PAGPAGPRGTPGERGEVGPAGPNGFAGPA------GAAGQPGAKGERGTKGPKGENGPVG 754
Query: 484 --GPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
GP+G+ G G G GP G RG+ GP G TG G G G G
Sbjct: 755 PTGPIGSAGPSGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAG 814
Query: 658 XXXNRGLPGDIGDIGRPGN---PGPPGQVKVRNP 750
RG GD G +GR G GPPG + P
Sbjct: 815 KEGLRGPRGDQGPVGRTGETGASGPPGFTGEKGP 848
Score = 115 bits (288), Expect = 3e-25
Identities = 89/261 (34%), Positives = 102/261 (39%), Gaps = 6/261 (2%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G G +G GP G +G +GP+G AGP+GS GP
Sbjct: 220 GERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA------------------- 260
Query: 178 XLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
PG G GP G GP G AG RG+ G PG+ G +G G G G+
Sbjct: 261 --PGPKGEIGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVA 318
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+ G VG G G R GI+G PG G G G+ G PGS G Q
Sbjct: 319 GAPGLPGPRG------IPGPVGAAGATGAR---GIVGEPGPAGSKGESGNKGEPGSAGAQ 369
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717
G GP GE G GPNG G G +RGLPG G G G P
Sbjct: 370 GP---PGPSGEEGKRGPNGEAGSAG------PSGPPGLRGSPGSRGLPGADGPAGVMGPP 420
Query: 718 GP---PGQVKVRNPPEGSSGR 771
GP G VR P G SGR
Sbjct: 421 GPRGATGPAGVRG-PNGDSGR 440
Score = 114 bits (286), Expect = 6e-25
Identities = 80/249 (32%), Positives = 89/249 (35%), Gaps = 6/249 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G +GP G G G G+ GP G PGP
Sbjct: 34 PTGDRGPRGERGPPGPPGRDGDDGIPGPPGPPGPPGPPGLGGNFAAQYDGKGVGLG---- 89
Query: 181 LPGKAGLQGP------AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
PG GL GP +G GPQG G G+ G PG G G RGP GP G
Sbjct: 90 -PGPMGLMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHPG 148
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
G G G +G L G+ G PG G G G PG G
Sbjct: 149 KPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENG 208
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
+ G G RG G +G G GP G G DG G PG G+IG
Sbjct: 209 TPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIG 268
Query: 703 RPGNPGPPG 729
GNPGP G
Sbjct: 269 PVGNPGPAG 277
Score = 107 bits (266), Expect = 1e-22
Identities = 82/269 (30%), Positives = 95/269 (35%), Gaps = 3/269 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G G+ G G GR GE +GP G G G+PG
Sbjct: 137 PPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPG 196
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PG G G G G +G GERG G PG G G G GP+G
Sbjct: 197 VKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPG 256
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G VG PG G +G +G PG GPVG G+PGA G G
Sbjct: 257 FPGAPGPKGEI---------GPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNPGANGLTG 307
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
+G G G G GL GP G+ G G G PG G G G
Sbjct: 308 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIV---------GEPGPAGSKGESG 358
Query: 712 NPGPPGQVKVRNPPEGSSGRYKRSTRAQS 798
N G PG + PP S KR ++
Sbjct: 359 NKGEPGSAGAQGPPGPSGEEGKRGPNGEA 387
Score = 106 bits (264), Expect = 2e-22
Identities = 78/241 (32%), Positives = 86/241 (35%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G QGP G GE G G AG G PGP P
Sbjct: 106 GAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGH------------------P 147
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
GK G G G GPQG G G G PG G G G G G
Sbjct: 148 GKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGEN 207
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G+VG PG G R G +G G GP+G+ G PG PG+ GP+G+
Sbjct: 208 GTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEI 267
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G G G GP G VG G +G G G G PG PGP
Sbjct: 268 GPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPR 327
Query: 727 G 729
G
Sbjct: 328 G 328
Score = 89.7 bits (221), Expect = 2e-17
Identities = 66/198 (33%), Positives = 73/198 (36%), Gaps = 3/198 (1%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G +GP G GP G G GD G PG G G GP G G
Sbjct: 33 GPTGDRGPRGERGPPGPPGRDGDDGIPGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGP 92
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG +G + G G PG GP G +G PG PG G G
Sbjct: 93 MGLMGPRGPP-----GASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHP 147
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP--- 717
G G GE G++GP G G G +G PG G G PG P
Sbjct: 148 GKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGEN 207
Query: 718 GPPGQVKVRNPPEGSSGR 771
G PGQ R P G GR
Sbjct: 208 GTPGQTGARGLP-GERGR 224
Score = 88.6 bits (218), Expect = 4e-17
Identities = 64/190 (33%), Positives = 74/190 (38%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G GPVG G+ G G GP GS GP
Sbjct: 956 PVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKG 1015
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G GL+G G G G AG+ GD+G PG VG G RGP GP G
Sbjct: 1016 PRGLPGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGK----------- 1064
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
DG+ G+PG G GI GS G+ GP G G PG PG GP G
Sbjct: 1065 ----------------DGRTGQPGTVGPA---GIRGSQGSQGPAGPPGPPGPPGPPGPSG 1105
Query: 541 KRGNQGPKGE 570
+ G +G+
Sbjct: 1106 GGYDFGYEGD 1115
Score = 37.0 bits (84), Expect = 0.15
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 535 QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGN 714
+G G++GP+GE G GP G G+D G+PG G PG
Sbjct: 32 KGPTGDRGPRGERGPPGPPGRDGDD---------------------GIPGPPGP---PGP 67
Query: 715 PGPPG 729
PGPPG
Sbjct: 68 PGPPG 72
Score = 33.9 bits (76), Expect = 1.3
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 16/104 (15%)
Frame = -3
Query: 521 PGAPGSPLF---------------PTGPIVPGEPIMPFKNLSPFCPGSPTLPSKXXXXXX 387
PG PG P F P P V GEP P +N +P G+ LP +
Sbjct: 168 PGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGA 227
Query: 386 XXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPLSPI-LPTIPGFP 258
PG P G +GPVGP PI PGFP
Sbjct: 228 ------------PG-PAGARGSDGSVGPVGPAGPIGSAGPPGFP 258
>sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor Length = 1464 Score = 169 bits (428), Expect = 2e-41 Identities = 151/522 (28%), Positives = 202/522 (38%), Gaps = 17/522 (3%) Frame = +1 Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180 P G G+ G GP+G G GP G +G G+PG Sbjct: 987 PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPG 1046 Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360 PG G GP G G G+ GE G G G VG G RGP GP G Sbjct: 1047 APGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPAGARGPAGPQG--------------- 1091 Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540 G+ G+ G KG R G+ G PG G G +G GA G GP+G Sbjct: 1092 ---------PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRG 1142 Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720 G+ G G+ GL G G +G G RG GD G +G PG PG Sbjct: 1143 PPGSAGAPGKDGLNGLPGPIGPPGP------------------RGRTGDAGPVGPPGPPG 1184 Query: 721 PPGQVK----------VRNPPEGSS---GRYKRSTRAQSFGDINDALFEKVDKITNKIKK 861 PPG + PP+ + GRY R+ A D + + + ++ +I+ Sbjct: 1185 PPGPPGPPSAGFDFSFLPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIEN 1244 Query: 862 LRFPTGLNKDSATRTCADIKSHRKSPIDGSYYIDPNEGSGKDSIEVEC-IFSEEDEVKTC 1038 +R P G K+ A RTC D+K G Y+IDPN+G D+I+V C + + E V Sbjct: 1245 IRSPEGSRKNPA-RTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPT 1303 Query: 1039 LSSVKQLGGLYNYKKPMKGETNWQNSLRLEGALTRAPDLHSMYVD-HTQMNFLRMQNSKS 1215 SV Q Y K P W +G S D Q+ FLR+ ++++ Sbjct: 1304 QPSVAQ-KNWYISKNPKDKRHVWFGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEA 1362 Query: 1216 YQEIEFLCDQSVIYGDSELSEENKFKFATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYK 1395 Q I + C SV Y D + T + K L KG + Sbjct: 1363 SQNITYHCKNSVAYMDQQ--------------TGNLKKALLLKG----------SNEIEI 1398 Query: 1396 NEFGRAIFNVTIEYDGCMYRTPGSSSKFKLE--TTELSMLPI 1515 G + F ++ DGC T G+ K +E TT+ S LPI Sbjct: 1399 RAEGNSRFTYSVTVDGCTSHT-GAWGKTVIEYKTTKTSRLPI 1439
Score = 124 bits (310), Expect = 9e-28
Identities = 86/256 (33%), Positives = 99/256 (38%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G +G G +GE GP G G VG PGP
Sbjct: 894 PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGA-------- 945
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G QG AG G G G+RG+RG PG+ G GE G GP G
Sbjct: 946 -PGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGA---SGERGPPGPMG 1001
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG+ G KG G G GP G G PGAPG +GP G
Sbjct: 1002 PPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAG 1061
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
K G++G G G GP G G G +RG+ G G G G PG
Sbjct: 1062 KSGDRGETGPAGPAGPVGPAGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPG 1121
Query: 721 PPGQVKVRNPPEGSSG 768
PPG + P G+SG
Sbjct: 1122 PPGSPGEQG-PSGASG 1136
Score = 123 bits (309), Expect = 1e-27
Identities = 83/249 (33%), Positives = 97/249 (38%), Gaps = 6/249 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G GD G +G G G+ G GL GP+G PGP
Sbjct: 741 PKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPG 800
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+ G GPAG GP G G+ G +G PG G G+ GP GP G
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPI------- 853
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERF------LKGIMGSPGTIGPVGNKGDPGAPG 522
G VG PG KG R G G+ G +GP G G+ G PG
Sbjct: 854 -----------------GNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPG 896
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
GP GK G +GP+GETG G G VG G +G PG G G
Sbjct: 897 PPGPAGKEGGKGPRGETGPAGRPGEVGPPG------------PPGPAGEKGSPGADGPAG 944
Query: 703 RPGNPGPPG 729
PG PGP G
Sbjct: 945 APGTPGPQG 953
Score = 118 bits (295), Expect = 5e-26
Identities = 85/257 (33%), Positives = 99/257 (38%), Gaps = 15/257 (5%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAG---PVGSPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
+G G +G+QGP G GE G G G P G PGP
Sbjct: 448 KGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGP 507
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPG---IVGNMGERGPTGPIGIVXXXXXXXX 345
G+ G GPAG G GEAG G+ G PG + G+ G GP G G
Sbjct: 508 A---GERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGR 564
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA--- 516
G GEPG+ GER G+ G PG +GP G G+ GA
Sbjct: 565 PGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGER---GVPGPPGAVGPAGKDGEAGAQGP 621
Query: 517 PGSIGPQGKRGNQGPKGETGLM------GPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGL 678
PG GP G+RG QGP G G GP G G+ GE RG
Sbjct: 622 PGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGF 681
Query: 679 PGDIGDIGRPGNPGPPG 729
PG+ G G PG GP G
Sbjct: 682 PGERGVQGPPGPAGPRG 698
Score = 117 bits (293), Expect = 9e-26
Identities = 89/266 (33%), Positives = 96/266 (36%), Gaps = 12/266 (4%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL- 183
G G G GP GR G G GL GP G PGP
Sbjct: 118 GPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISV 177
Query: 184 ------PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
G GL GP G GPQG G G+ G PG G MG RGP GP G
Sbjct: 178 PGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPG---KNGDDGE 234
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP-- 519
L G G PG KG R G+ G+ G GP G KG+PG+P
Sbjct: 235 AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGE 294
Query: 520 -GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
G+ G G RG G +G G GP G G DG G PG G
Sbjct: 295 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGA---------------AGPPGPTGP 339
Query: 697 IGRPGNPGPPGQVKVRNP--PEGSSG 768
G PG PG G P P GS G
Sbjct: 340 AGPPGFPGAVGAKGEAGPQGPRGSEG 365
Score = 114 bits (286), Expect = 6e-25
Identities = 85/261 (32%), Positives = 100/261 (38%), Gaps = 5/261 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGP---VGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G +G+ G G G G++GP GL G G+PGP
Sbjct: 282 PAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG 341
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PG G +G AG GP+G G +G RG PG G G GP G G
Sbjct: 342 PPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGA----------- 390
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G G PG G R G G G GP GN G+PGAPGS G
Sbjct: 391 -------DGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKG 443
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G +G GP G+ GP G GE+G+ GLPG G+ G PG
Sbjct: 444 DTGAKGEPGP---VGVQGPPGPAGEEGKRGARGEPGP---------TGLPGPPGERGGPG 491
Query: 712 NPGPPGQVKVRNP--PEGSSG 768
+ G PG V P P G G
Sbjct: 492 SRGFPGADGVAGPKGPAGERG 512
Score = 113 bits (283), Expect = 1e-24
Identities = 87/274 (31%), Positives = 99/274 (36%), Gaps = 23/274 (8%)
Frame = +1
Query: 16 GDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKA 195
G + + GP+G G P GL GP G+PGP PG+
Sbjct: 173 GGISVPGPMGPSG---PRGLPGPPGAPGPQGFQGPPGE------------------PGEP 211
Query: 196 GLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGP---------IGIVXXXXXXXXX 348
G GP G GP G G+ GD G G G GERGP GP G+
Sbjct: 212 GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS 271
Query: 349 XXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI 528
G+ G PGQ G R L G G PG GP G +G+ GA G+
Sbjct: 272 GLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAA 331
Query: 529 GPQGKRGNQGP---------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGL- 678
GP G G GP KGE G GP G G G N G
Sbjct: 332 GPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGAD 391
Query: 679 --PGDIGDIGRPGNPGPPGQVKVRNP--PEGSSG 768
PG G G PG G PG R P P+G G
Sbjct: 392 GQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGG 425
Score = 113 bits (283), Expect = 1e-24
Identities = 78/249 (31%), Positives = 89/249 (35%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +G G GP G +GE GP G G G PGP
Sbjct: 617 GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGAR 676
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G+ G G G GP G AG RG G PG G G+ G G G
Sbjct: 677 GERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAA 736
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG+ G R L G +G PG G G+KG+ G G GP G R
Sbjct: 737 GLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR 796
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G +GE G GP G G G G G+ GD G G+ GPP
Sbjct: 797 GAPGDRGEPGPPGPAGFAGPPG---------------ADGQPGAKGEPGDAGAKGDAGPP 841
Query: 727 GQVKVRNPP 753
G PP
Sbjct: 842 GPAGPAGPP 850
Score = 112 bits (279), Expect = 4e-24
Identities = 82/257 (31%), Positives = 98/257 (38%), Gaps = 9/257 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KGE GP+G+ GP PGP P
Sbjct: 434 GEPGAPGSKGDTGAKGEPGPVGVQGP---PGPAGEEGKRGARGEPGPTGLPGPPGERGGP 490
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G GP+G AGERG G G G+ GE G G G+
Sbjct: 491 GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPD 550
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGN------KGDPGAPGSI 528
DG+ G PG G R G+MG PG G G +G PG PG++
Sbjct: 551 GKTGPPGPAGQ---DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAV 607
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI---GDI 699
GP GK G G +G G GP G GE G +GLPG G+
Sbjct: 608 GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF------------QGLPGPAGPPGEA 655
Query: 700 GRPGNPGPPGQVKVRNP 750
G+PG G PG + P
Sbjct: 656 GKPGEQGVPGDLGAPGP 672
Score = 108 bits (270), Expect = 4e-23
Identities = 83/258 (32%), Positives = 96/258 (37%), Gaps = 2/258 (0%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G+ G G KG G G AG G PGP
Sbjct: 570 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKD---------------- 613
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+AG QGP G GP GE GE+G G+PG G G GP G G
Sbjct: 614 --GEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG------KPGEQGVPG 665
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G+ G G G +G G+PG G G+ G PGAPGS G G
Sbjct: 666 DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPG 725
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G G +G GL GP G G+ G RGL G IG G G PG
Sbjct: 726 LQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV------RGLTGPIGPPGPAGAPG 779
Query: 721 PPGQVKVRNP--PEGSSG 768
G+ P P G+ G
Sbjct: 780 DKGESGPSGPAGPTGARG 797
Score = 92.4 bits (228), Expect = 3e-18
Identities = 66/202 (32%), Positives = 76/202 (37%), Gaps = 7/202 (3%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGI----VXXXXXXXXXXX 354
G G GP G GP G G G G PG+ G G GP GP G+
Sbjct: 112 GPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKS 171
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
L G G PG +G + G G PG GP+G +G PG PG G
Sbjct: 172 TGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGD 231
Query: 535 QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGN 714
G+ G G GE G GP G G G +G G G G PG+
Sbjct: 232 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS 291
Query: 715 P---GPPGQVKVRNPPEGSSGR 771
P G PGQ+ R P G GR
Sbjct: 292 PGENGAPGQMGPRGLP-GERGR 312
Score = 59.7 bits (143), Expect = 2e-08
Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Frame = +1
Query: 406 LDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGN----------- 552
++G G+ G +G R G G G G G G PG PG GP G GN
Sbjct: 110 VEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDE 169
Query: 553 -----------QGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
GP G GL GP G G G RG PG G
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKN 229
Query: 700 GRPGNPGPPGQVKVRNP--PEGSSG 768
G G G PG+ R P P+G+ G
Sbjct: 230 GDDGEAGKPGRPGERGPPGPQGARG 254
Score = 53.1 bits (126), Expect = 2e-06
Identities = 38/104 (36%), Positives = 41/104 (39%)
Frame = +1
Query: 421 GEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVV 600
G G KG+ G G G GP G G PG PG GP G G GP G G P
Sbjct: 109 GVEGPKGDT---GPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSY 165
Query: 601 GEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQ 732
G D + RGLPG G G G GPPG+
Sbjct: 166 GYDEKSTGGISVPGPMGPSGP--RGLPGPPGAPGPQGFQGPPGE 207
Score = 48.1 bits (113), Expect = 7e-05
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = +1
Query: 478 TIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
T G G KGD G G GP G G G G+ GL GP G G G
Sbjct: 107 TTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYG 166
Query: 658 XXXNR----GLPGDIGDIGRPGNPGPPG 729
+PG +G G G PGPPG
Sbjct: 167 YDEKSTGGISVPGPMGPSGPRGLPGPPG 194
Score = 45.8 bits (107), Expect = 3e-04
Identities = 35/103 (33%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Frame = +1
Query: 472 PGTIGPVGNKGDPGAPGSIGP--QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXX 645
PG P G GS P Q G +GPKG+TG GP G G G
Sbjct: 82 PGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRD--------- 132
Query: 646 XXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPEGSSGRY 774
G+PG G G PG PGPPG P G G +
Sbjct: 133 ---------GIPGQPGLPGPPGPPGPPG-------PPGLGGNF 159
Score = 33.1 bits (74), Expect = 2.2
Identities = 47/166 (28%), Positives = 51/166 (30%), Gaps = 9/166 (5%)
Frame = -3
Query: 728 PGGPGFPGLPISPISXXXXXXXXXXXXXXXXXXPAEPDSPSSPTTPFGPMRPVSXXXXXX 549
PG PG PG P+ P PA P+ P P G
Sbjct: 1048 PGAPGAPG-PVGPAGKSGDRGETGPAGPAGPVGPAGARGPAGPQGPRGDKGETGEQGDRG 1106
Query: 548 XXXXXXPI----EPGAPGSP--LFPTGPIVPGEPIMPFKNLSPFCPGSPTLPSKXXXXXX 387
PG PGSP P+G P P P PGS P K
Sbjct: 1107 IKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP--------PGSAGAPGKDGLNGL 1158
Query: 386 XXXXXXXXXPDWPGCPLEPSGP---TIPIGPVGPLSPILPTIPGFP 258
PG P+ P GP T GPVGP P P PG P
Sbjct: 1159 ------------PG-PIGPPGPRGRTGDAGPVGPPGP--PGPPGPP 1189
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,428,429
Number of Sequences: 369166
Number of extensions: 3306965
Number of successful extensions: 72984
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18080
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18325966995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
Cluster detail
