Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_N01
(878 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01149|CO1A2_MOUSE Collagen alpha 2(I) chain precursor 131 2e-30
sp|P02466|CO1A2_RAT Collagen alpha 2(I) chain precursor 131 3e-30
sp|Q02788|CO6A2_MOUSE Collagen alpha 2(VI) chain precursor 129 8e-30
sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor 129 1e-29
sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor ... 128 2e-29
sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor 128 2e-29
sp|P02461|CO3A1_HUMAN Collagen alpha 1(III) chain precursor 127 3e-29
sp|P25940|CO5A3_HUMAN Collagen alpha 3(V) chain precursor 127 4e-29
sp|Q9JMH4|COHA1_MESAU Collagen alpha 1(XVII) chain (Bullous... 127 4e-29
sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain 127 4e-29
>sp|Q01149|CO1A2_MOUSE Collagen alpha 2(I) chain precursor
Length = 1372
Score = 131 bits (330), Expect = 2e-30
Identities = 99/286 (34%), Positives = 114/286 (39%), Gaps = 14/286 (4%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G+ G G QGPVGR GE G G G VG GP
Sbjct: 822 EGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGA------------------ 863
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGP---TGPIGIVXXXXXXXXXXX 354
PG AG QG G G G G RG+RG PGI G +GE GP +GP G
Sbjct: 864 PGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGV 923
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
G+ G+PG KGER G PG+IGP G G PG GS+GP
Sbjct: 924 NGAPGEAGRDGNPGSDGPPGRDGQPGHKGER------GYPGSIGPTGAAGAPGPHGSVGP 977
Query: 535 QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGN 714
GK GN+G G G +GP G VG G +RGLPG G G G
Sbjct: 978 AGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGHRGLPGLKGYSGLQGL 1037
Query: 715 P---------GPPGQVKVRNP--PDGSSGRYKRSTRAQSFGDINDA 819
P G PG V P P G SG + R+ G + A
Sbjct: 1038 PGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKDGRSGQPGPVGPA 1083
Score = 123 bits (309), Expect = 6e-28
Identities = 91/275 (33%), Positives = 107/275 (38%), Gaps = 20/275 (7%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G +G QGP G GE G G G GS GP
Sbjct: 366 KGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGP 425
Query: 184 PGKAGLQGPAGGNGPQGEAGERGD------RGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
PG G GPAG GP G+AG G+ RG PG GN+G G GP+G+
Sbjct: 426 PGNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGP 485
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
G G+PG+ GER G+ G+ G GP GN G G PG
Sbjct: 486 IGPAGPRGEAGNIGFPGPK---GPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGP 542
Query: 526 IGPQGKRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
G QG +G QGP G GL GP+G GE G+ GLPG G
Sbjct: 543 QGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEF---------GLPGPAGP 593
Query: 697 IGRPGNP------GPPGQVKVRNP-----PDGSSG 768
G G P GP G + R P PDG+ G
Sbjct: 594 RGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKG 628
Score = 122 bits (306), Expect = 1e-27
Identities = 90/276 (32%), Positives = 105/276 (38%), Gaps = 20/276 (7%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGR---KGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
PQGV+G G QGP G +G GP G G VG PG
Sbjct: 542 PQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERG--------------------- 580
Query: 172 XXXLPGKAGLQGPAGGNG------------PQGEAGERGDRGNPGIVGNMGERGPTGPIG 315
LPG+ GL GPAG G P G G RG G PG GN GE G G G
Sbjct: 581 ---LPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPG 637
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG 495
L G G G+ G R + G +G+PG G G
Sbjct: 638 SAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASG 697
Query: 496 NKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
++G+ GA G GP G RG+ G +GE G GPNG G G G
Sbjct: 698 DRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENG 757
Query: 676 LPGDIGDIGR--PGNP-GPPGQVKVRNP--PDGSSG 768
+ G G +G P P GPPG V R P G +G
Sbjct: 758 IVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTG 793
Score = 117 bits (294), Expect = 3e-26
Identities = 89/261 (34%), Positives = 102/261 (39%), Gaps = 3/261 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG+ G GI G G +GE G G+AG +G PGP
Sbjct: 869 PQGLLGAPGILGLPGSRGERGLPGIAGALGEPGP---LGISGPPGARGPPGAVGSPGVNG 925
Query: 181 LPGKAGLQGPAGGNGP---QGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PG+AG G G +GP G+ G +G+RG PG +G G G GP G V
Sbjct: 926 APGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSIGPTGAAGAPGPHGSVGPAGKHGNRG 985
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G G G KGE KG G PG G G +G PG G G
Sbjct: 986 EPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGHRGLPGLKGYSGLQGLPGLAGLHG 1045
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
QG G GP G G GP+G VG+DG RG G G G PG
Sbjct: 1046 DQGAPGPVGPAGPRGPAGPSGPVGKDGRSGQPGPVGPAGV------RGSQGSQGPAGPPG 1099
Query: 712 NPGPPGQVKVRNPPDGSSGRY 774
PGPPG PP S G Y
Sbjct: 1100 PPGPPG------PPGVSGGGY 1114
Score = 117 bits (292), Expect = 6e-26
Identities = 86/263 (32%), Positives = 101/263 (38%), Gaps = 6/263 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPI---GLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G EG +G+ G GR G IGP G AG +G PGP
Sbjct: 467 PSGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGERGHPGLAGARG 526
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G G QGP G G QG GE+G G PG G G G TG +G
Sbjct: 527 APGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVG------------ 574
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEP---GQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
L G+ G P G +GER G G+ G GP+G++G GAPG
Sbjct: 575 ------------KPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPG 622
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G +G+ G G G G GP G+ GE G GL GD G+ G
Sbjct: 623 PDGNKGEAGAVGAPGSAGASGPGGLPGERG------AAGIPGGKGEKGETGLRGDTGNTG 676
Query: 703 RPGNPGPPGQVKVRNPPDGSSGR 771
R G G PG V P S R
Sbjct: 677 RDGARGIPGAVGAPGPAGASGDR 699
Score = 116 bits (291), Expect = 7e-26
Identities = 81/256 (31%), Positives = 94/256 (36%), Gaps = 2/256 (0%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G GE G +G AGP G GP
Sbjct: 703 GAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPT 762
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G GP+G NGP G G RGD G PG+ G G G TGP G
Sbjct: 763 GSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPG----------------- 805
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
+ G G PG G+ ++G G G +G G G G PG +G +G
Sbjct: 806 ----------PSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPS 855
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G G G GP G++G G RGLPG G +G PG G
Sbjct: 856 GEPGTAGAPGTAGPQGLLGAPG---------ILGLPGSRGERGLPGIAGALGEPGPLGIS 906
Query: 727 GQVKVRNPPD--GSSG 768
G R PP GS G
Sbjct: 907 GPPGARGPPGAVGSPG 922
Score = 115 bits (288), Expect = 2e-25
Identities = 80/248 (32%), Positives = 89/248 (35%), Gaps = 6/248 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G GP GR G GP+G GP GSPGP
Sbjct: 38 RGPRGQRGPAGPRGRDGVDGPMGPPGPPGSPGPPGSPAPPGLTGNFAAQYSDKGVSSG-- 95
Query: 184 PGKAGLQGP------AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
PG GL GP G GPQG G G+ G PG G G RGP G G
Sbjct: 96 PGPMGLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGK 155
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
G G G KG + G+ G PG G G G PG G+
Sbjct: 156 PGRPGERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGT 215
Query: 526 IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G G RG G +G G GP G G DG G PG G++G
Sbjct: 216 PGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGP 275
Query: 706 PGNPGPPG 729
GNPGP G
Sbjct: 276 VGNPGPAG 283
Score = 113 bits (282), Expect = 8e-25
Identities = 83/256 (32%), Positives = 96/256 (37%), Gaps = 6/256 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G+ G G G G GP GL G G+ G
Sbjct: 623 PDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARG 682
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
+PG G GPAG +G +GEAG G G G G+ GERG GP G
Sbjct: 683 IPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG--------------- 727
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGP---VGNKGDPGAPGSIG 531
G G+PG KGE+ KG G G +GP VG G G G G
Sbjct: 728 ---------PNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPG 778
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P G RG+ GP G TG G G G G RG GD G +GR G
Sbjct: 779 PVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTG 838
Query: 712 N---PGPPGQVKVRNP 750
GPPG V + P
Sbjct: 839 ETGASGPPGFVGEKGP 854
Score = 112 bits (279), Expect = 2e-24
Identities = 86/272 (31%), Positives = 99/272 (36%), Gaps = 18/272 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G G +G GP G +G +GP+G AGP+GS GP
Sbjct: 226 GERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA------------------- 266
Query: 178 XLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVG------NMGERGPTGPIGIVXXXXXX 339
PG G GP G GP G AG RG+ G PG+ G N G G TG G
Sbjct: 267 --PGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGATGLPGVA 324
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPG---------QKGERFLKGIMGSPGTIGPV 492
G VGEPG KGE G G PG G
Sbjct: 325 GAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPPGPSGEE 384
Query: 493 GNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR 672
G +G PG GS GP G G +G G GL G +G G G +
Sbjct: 385 GKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGIRGPNGDA 444
Query: 673 GLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSG 768
G PG+ G +G G PG PG V P G G
Sbjct: 445 GRPGEPGLMGPRGLPGSPGNV----GPSGKEG 472
Score = 111 bits (278), Expect = 2e-24
Identities = 84/258 (32%), Positives = 97/258 (37%), Gaps = 2/258 (0%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G +G GP G G GP G GPVG+PGP
Sbjct: 248 PVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGN-- 305
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG GL G G G G AG G G GI G G G TG G+V
Sbjct: 306 -PGTNGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESG 364
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G+ G+ G GE G G PG G G++G PGA G G G
Sbjct: 365 NKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMG 424
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
GN+G G G+ GPNG G GE RGLPG G++G G G
Sbjct: 425 PPGNRGSTGPAGIRGPNGDAGRPGEPGLMGP------------RGLPGSPGNVGPSGKEG 472
Query: 721 PPG--QVKVRNPPDGSSG 768
P G + R P G +G
Sbjct: 473 PVGLPGIDGRPGPIGPAG 490
Score = 106 bits (264), Expect = 1e-22
Identities = 77/250 (30%), Positives = 93/250 (37%), Gaps = 9/250 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G G G QGP G GE GP G GP GSPG
Sbjct: 112 GAPGPQGFQGPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGAR 171
Query: 178 XLPGKAGL------QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
PG GL +G +G +G +G+ G +G +G PG G G G G G+
Sbjct: 172 GFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGER--- 228
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
G+VG PG G R G +G G GP+G+ G PG P
Sbjct: 229 ------------------------GRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFP 264
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
G+ GP+G+ G G G G GP G VG G +G G G
Sbjct: 265 GAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGATGLPGVA 324
Query: 700 GRPGNPGPPG 729
G PG PGP G
Sbjct: 325 GAPGLPGPRG 334
Score = 106 bits (264), Expect = 1e-22
Identities = 79/264 (29%), Positives = 94/264 (35%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +G G G G +G +GP G G G+PG P
Sbjct: 148 GEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEP 207
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G G +G GERG G PG G G G GP+G
Sbjct: 208 GAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAP 267
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G VG PG G +G +G PG GPVG G+PG G G +G
Sbjct: 268 GPKGEL---------GPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGAT 318
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G G GL GP G+ G G G PG G G GN G P
Sbjct: 319 GLPGVAGAPGLPGPRGIPGPAGAAGATGARGLV---------GEPGPAGSKGESGNKGEP 369
Query: 727 GQVKVRNPPDGSSGRYKRSTRAQS 798
G V + PP S KR + ++
Sbjct: 370 GSVGAQGPPGPSGEEGKRGSPGEA 393
Score = 92.8 bits (229), Expect = 1e-18
Identities = 77/263 (29%), Positives = 91/263 (34%), Gaps = 10/263 (3%)
Frame = +1
Query: 13 EGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGK 192
+G G +GP G++G GP G G G GP PG
Sbjct: 32 KGPTGDRGPRGQRGPAGPRGRDGVDGPMGP---------------------------PGP 64
Query: 193 AGLQGPAGGNGPQGEAG-------ERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G GP G P G G ++G PG +G MG RGP G
Sbjct: 65 PGSPGPPGSPAPPGLTGNFAAQYSDKGVSSGPGPMGLMGPRGPPGA-------------- 110
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
VG PG +G + G G PG GP G +G G+PG G
Sbjct: 111 ----------------------VGAPGPQGFQGPAGEPGEPGQTGPAGPRGPAGSPGKAG 148
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G G G GE G++GP G G G +G PG G G PG
Sbjct: 149 EDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPG 208
Query: 712 NP---GPPGQVKVRNPPDGSSGR 771
P G PGQ R P G GR
Sbjct: 209 APGENGTPGQAGARGLP-GERGR 230
Score = 30.8 bits (68), Expect = 5.2
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Frame = -1
Query: 521 PGAPGSPLF---------------PTGPIVPGEPIMPFKNLSPFCPGSPTLPSKXXXXXX 387
PG PG P F P V GEP P +N +P G+ LP +
Sbjct: 174 PGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGA 233
Query: 386 XXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPLSPI-LPTIPGFP 258
PG P G +GPVGP PI PGFP
Sbjct: 234 ------------PG-PAGARGSDGSVGPVGPAGPIGSAGPPGFP 264
>sp|P02466|CO1A2_RAT Collagen alpha 2(I) chain precursor
Length = 1372
Score = 131 bits (329), Expect = 3e-30
Identities = 97/277 (35%), Positives = 109/277 (39%), Gaps = 17/277 (6%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G+ G G QGPVGR GEIG G G G GP
Sbjct: 822 EGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGP------------------ 863
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGP---TGPIGIVXXXXXXXXXXX 354
PG AG QG G G G G RG+RG PGI G +GE GP GP G
Sbjct: 864 PGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGV 923
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
G+ G+PG KGER G PG IGP G G PG GS+GP
Sbjct: 924 NGAPGEAGRDGNPGSDGPPGRDGQPGHKGER------GYPGNIGPTGAAGAPGPHGSVGP 977
Query: 535 QGKRGNQGPKGETGLMGPNGVV------------GEDGEXXXXXXXXXXXXXXXXXNRGL 678
GK GN+G G G +GP G V G+ GE +GL
Sbjct: 978 AGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGLKGHNGLQGL 1037
Query: 679 PGDIGDIGRPGNPGPPGQVKVRNP--PDGSSGRYKRS 783
PG G G G PGP G R P P G G+ RS
Sbjct: 1038 PGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRS 1074
Score = 125 bits (314), Expect = 2e-28
Identities = 85/258 (32%), Positives = 101/258 (39%), Gaps = 15/258 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGR---KGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
PQGV+G G QGP G +G GP G AG VG PG
Sbjct: 542 PQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERG--------------------- 580
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGE------------RGDRGNPGIVGNMGERGPTGPIG 315
LPG+ GL GPAG G +G GE RG G PG GN GE G G G
Sbjct: 581 ---LPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPG 637
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG 495
L G++G PG+ G R G +G+PG G G
Sbjct: 638 SAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASG 697
Query: 496 NKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
++G+ GA G GP G RG+ G +GE G GPNG G G G
Sbjct: 698 DRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENG 757
Query: 676 LPGDIGDIGRPGNPGPPG 729
+ G G +G G GP G
Sbjct: 758 IVGPTGPVGAAGPSGPNG 775
Score = 124 bits (311), Expect = 3e-28
Identities = 88/272 (32%), Positives = 106/272 (38%), Gaps = 17/272 (6%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G QGP G GE G G G GS GP
Sbjct: 366 KGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGP 425
Query: 184 PGKAGLQGPAGGNGPQGEAGERGD------RGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
PG G GPAG GP G+AG G+ RG PG GN+G G GP+G+
Sbjct: 426 PGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGP 485
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
G G+PG+KG L G G+PG G G +G PG G
Sbjct: 486 IGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGV 545
Query: 526 IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G +G++G GP G GL GP+G GE G+ GLPG G G
Sbjct: 546 QGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEF---------GLPGPAGPRGE 596
Query: 706 PGNP------GPPGQVKVRNP-----PDGSSG 768
G P GP G + +R P PDG+ G
Sbjct: 597 RGPPGESGAAGPSGPIGIRGPSGAPGPDGNKG 628
Score = 118 bits (295), Expect = 2e-26
Identities = 80/248 (32%), Positives = 90/248 (36%), Gaps = 6/248 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G GP GR G GP+G GP G+PGP
Sbjct: 38 RGPRGQRGPAGPRGRDGVDGPVGPPGPPGAPGPPGPPGPPGLTGNFAAQYSDKGVSAG-- 95
Query: 184 PGKAGLQGP------AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXX 345
PG GL GP G GPQG G G+ G PG G G RGP GP G
Sbjct: 96 PGPMGLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGK 155
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGS 525
G G G +G L G+ G PG G G G PG G+
Sbjct: 156 PGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGT 215
Query: 526 IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G G RG G +G G GP G G DG G PG G++G
Sbjct: 216 PGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGP 275
Query: 706 PGNPGPPG 729
GNPGP G
Sbjct: 276 VGNPGPAG 283
Score = 116 bits (290), Expect = 9e-26
Identities = 86/270 (31%), Positives = 102/270 (37%), Gaps = 14/270 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G +G GP G G GP G GPVG+PGP
Sbjct: 248 PVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGP---------------AGPAGPRGEAG 292
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGP---TGPIGIVXXXXXXXXXX 351
LPG +G GP G G G G +G G PG+ G G GP GP+G
Sbjct: 293 LPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVG 352
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPV---------GNKG 504
G G PG GE +G G PG+ GP G++G
Sbjct: 353 EPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRG 412
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
PGA G G G GN+G G G+ GPNG G GE RGLPG
Sbjct: 413 LPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGP------------RGLPG 460
Query: 685 DIGDIGRPGNPGPPG--QVKVRNPPDGSSG 768
G++G G GP G + R P G +G
Sbjct: 461 SPGNVGPAGKEGPVGLPGIDGRPGPIGPAG 490
Score = 115 bits (289), Expect = 1e-25
Identities = 81/257 (31%), Positives = 94/257 (36%), Gaps = 2/257 (0%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G GE G +G AGP G GP
Sbjct: 703 GAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPT 762
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G GP+G NGP G AG RGD G PG+ G G G TGP G
Sbjct: 763 GPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPG----------------- 805
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
+ G G PG G+ ++G G G +G G G G PG G +G
Sbjct: 806 ----------PSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPS 855
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G G G G GP G++G G G PG +G G PG GPP
Sbjct: 856 GEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPP 915
Query: 727 GQVKVR--NPPDGSSGR 771
G V N G +GR
Sbjct: 916 GAVGSPGVNGAPGEAGR 932
Score = 115 bits (289), Expect = 1e-25
Identities = 91/268 (33%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G LGI GP G +G G +G G G+PG P
Sbjct: 898 GEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYP 957
Query: 187 GKAGLQGPAGGNGPQGE---AGERGDRGNPGI------VGNMGERGPTGPIGIVXXXXXX 339
G G G AG GP G AG+ G+RG PG VG +G RGP+GP GI
Sbjct: 958 GNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGI------- 1010
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGS---PGTIGPVGNKGDP 510
G GEPG KG R L G+ G G G G GD
Sbjct: 1011 -----------------------RGDKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQ 1047
Query: 511 GAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI 690
GAPG +GP G RG GP G G G +G G G RG G
Sbjct: 1048 GAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGV---------------RGSQGSQ 1092
Query: 691 GDIGRPGNPGPPGQVKVRNPPDGSSGRY 774
G G PG PGPPG PP S G Y
Sbjct: 1093 GPAGPPGPPGPPG------PPGVSGGGY 1114
Score = 114 bits (286), Expect = 3e-25
Identities = 84/261 (32%), Positives = 97/261 (37%), Gaps = 18/261 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G G +G GP G +G +GP+G AGP+GS GP
Sbjct: 226 GERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA------------------- 266
Query: 178 XLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVG------NMGERGPTGPIGIVXXXXXX 339
PG G GP G GP G AG RG+ G PG+ G N G G TG G
Sbjct: 267 --PGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVA 324
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPG---------QKGERFLKGIMGSPGTIGPV 492
G VGEPG KGE G G PG G
Sbjct: 325 GAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEE 384
Query: 493 GNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR 672
G +G PG PGS GP G G +G G GL G +G G G +
Sbjct: 385 GKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDA 444
Query: 673 GLPGDIGDIGRPGNPGPPGQV 735
G PG+ G +G G PG PG V
Sbjct: 445 GRPGEPGLMGPRGLPGSPGNV 465
Score = 114 bits (286), Expect = 3e-25
Identities = 86/272 (31%), Positives = 101/272 (37%), Gaps = 15/272 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPI---GLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G EG +G+ G GR G IGP G AG +G PGP
Sbjct: 467 PAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGE----------- 515
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G GL G G GP G G +G G G+ G GE+GP GP G
Sbjct: 516 ----KGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGP----- 566
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
G GE G+ GER L G G PG GP G +G PG G+ G
Sbjct: 567 -------------------SGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAG 607
Query: 532 PQGKRGNQGP---------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR---G 675
P G G +GP KGE G +G G G G + G
Sbjct: 608 PSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETG 667
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
L G+IG+ GR G G PG + P S R
Sbjct: 668 LRGEIGNPGRDGARGAPGAIGAPGPAGASGDR 699
Score = 114 bits (285), Expect = 4e-25
Identities = 87/270 (32%), Positives = 102/270 (37%), Gaps = 14/270 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G+ G+ G G G KGE G GL G +G+PG
Sbjct: 644 PGGLPGERGAAGIPGGKGEKGETGLRGEIGNPG---------------------RDGARG 682
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G GPAG +G +GEAG G G G G+ GERG GP G
Sbjct: 683 APGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG--------------- 727
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTI---GPVGNKGDPGAPGSIG 531
G G+PG KGE+ KG G G + GPVG G G G G
Sbjct: 728 ---------PNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPG 778
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P G RG+ GP G TG G G G G RG GD G +GR G
Sbjct: 779 PAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTG 838
Query: 712 N---PGPPGQVKVRNP--------PDGSSG 768
GPPG + P P G++G
Sbjct: 839 EIGASGPPGFAGEKGPSGEPGTTGPPGTAG 868
Score = 113 bits (283), Expect = 6e-25
Identities = 80/276 (28%), Positives = 103/276 (37%), Gaps = 8/276 (2%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGP---IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G +G+ G +GP G G +GP +G AGP G GP
Sbjct: 742 GAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRT 801
Query: 178 XLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
PG +G+ GP G G G+ G RG RG+ G VG GE G +GP G
Sbjct: 802 GPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTT 861
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+ G G G++G+ + G +G PG +G G G G PG++G
Sbjct: 862 GPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSP 921
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717
G G G G G G +G G DG+ PG G+ G PGN
Sbjct: 922 GVNGAPGEAGRDGNPGSDGPPGRDGQ---------------------PGHKGERGYPGNI 960
Query: 718 GPPGQVKVRNP-----PDGSSGRYKRSTRAQSFGDI 810
GP G P P G G A S G +
Sbjct: 961 GPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPV 996
Score = 106 bits (265), Expect = 7e-23
Identities = 86/288 (29%), Positives = 100/288 (34%), Gaps = 32/288 (11%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSP------------GPXXXXXXXXXXXXXX 144
P G G+ G GP G +G GP G AG G P GP
Sbjct: 122 PAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 181
Query: 145 XXXXXXXXXXXXL---PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIG 315
L PG G++G G G G G+ G RG PG G +G GP G G
Sbjct: 182 FKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARG 241
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG 495
G VG PG G +G G PG GPVG
Sbjct: 242 SDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVG 301
Query: 496 NKGDPGAPGSIGPQ---------------GKRGNQGPKGETGLMGPNGVVGEDGEXXXXX 630
G+PGA G G + G RG GP G G GP G+VGE G
Sbjct: 302 PPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKG 361
Query: 631 XXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPD--GSSG 768
+G PG G+ G+ G+PG PG PP GS G
Sbjct: 362 ETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPG 409
Score = 96.7 bits (239), Expect = 8e-20
Identities = 80/260 (30%), Positives = 94/260 (36%), Gaps = 7/260 (2%)
Frame = +1
Query: 13 EGDLGIQGPVGRKGEIGPIG---LAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G +GP G++G GP G + GPVG PGP
Sbjct: 32 KGPTGDRGPRGQRGPAGPRGRDGVDGPVGPPGP--------------------------- 64
Query: 184 PGKAGLQGPAGGNGPQGE-AGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G GP G G G A + D+G G MG GP GP
Sbjct: 65 PGAPGPPGPPGPPGLTGNFAAQYSDKGVSAGPGPMGLMGPRGP----------------- 107
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G VG PG +G + G G PG GP G++G G PG G G
Sbjct: 108 ----------------PGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDG 151
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP- 717
G G GE G++GP G G G +G PG G G PG P
Sbjct: 152 HPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPG 211
Query: 718 --GPPGQVKVRNPPDGSSGR 771
G PGQ R P G GR
Sbjct: 212 ENGTPGQAGARGLP-GERGR 230
Score = 78.2 bits (191), Expect = 3e-14
Identities = 60/194 (30%), Positives = 74/194 (38%), Gaps = 9/194 (4%)
Frame = +1
Query: 217 GNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXX 396
G+ +G G+RG RG G G G G GP+G
Sbjct: 28 GSVRKGPTGDRGPRGQRGPAGPRGRDGVDGPVG------------------------PPG 63
Query: 397 XXXLDGKVGEPGQKG-------ERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQ 555
G G PG G + KG+ PG +G +G +G PGA G+ GPQG +G
Sbjct: 64 PPGAPGPPGPPGPPGLTGNFAAQYSDKGVSAGPGPMGLMGPRGPPGAVGAPGPQGFQGPA 123
Query: 556 GPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQV 735
G GE G GP G G G RG+ G G G PG PG PG
Sbjct: 124 GEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFK 183
Query: 736 KVR--NPPDGSSGR 771
+R N DG G+
Sbjct: 184 GIRGHNGLDGLKGQ 197
Score = 30.8 bits (68), Expect = 5.2
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Frame = -1
Query: 521 PGAPGSPLF---------------PTGPIVPGEPIMPFKNLSPFCPGSPTLPSKXXXXXX 387
PG PG P F P V GEP P +N +P G+ LP +
Sbjct: 174 PGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGA 233
Query: 386 XXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPLSPI-LPTIPGFP 258
PG P G +GPVGP PI PGFP
Sbjct: 234 ------------PG-PAGARGSDGSVGPVGPAGPIGSAGPPGFP 264
>sp|Q02788|CO6A2_MOUSE Collagen alpha 2(VI) chain precursor
Length = 1029
Score = 129 bits (325), Expect = 8e-30
Identities = 88/266 (33%), Positives = 105/266 (39%), Gaps = 10/266 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +GD G +GP G GE G G G G+ G
Sbjct: 351 PPGCKGDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNG 410
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G++G GG GP+G GE G RG+PG G G GP G G
Sbjct: 411 APGSPGVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKG--------------- 455
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G+VG G KG+R L G G G +G G +G G PG GP+G
Sbjct: 456 ------DPGPEGPRGLAGEVGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRG 509
Query: 541 KRGNQGPKGETG-----LMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G GPKG+ G GP G GE GE +G PG GD G
Sbjct: 510 DSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPPGPEGGRGDFGL---KGTPGRKGDKGE 566
Query: 706 PGNPGPPGQVKVRNP-----PDGSSG 768
P +PGPPG+ R P P+G G
Sbjct: 567 PADPGPPGEPGPRGPRGIPGPEGEPG 592
Score = 117 bits (293), Expect = 4e-26
Identities = 85/261 (32%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G +GD GI+GP+G G G G G G G
Sbjct: 292 KGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGP 351
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
PG G G G +G GEAG G+RG+ G G+ G G GP G
Sbjct: 352 PGCKGDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNGA 411
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
G GEPG++G+ G G PG+ GP G KGDPG G G G+
Sbjct: 412 PGSPGVKGGKGGPGPRGPKGEPGRRGD---PGTKGGPGSDGPKGEKGDPGPEGPRGLAGE 468
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG--NP 717
G++G KG+ GL GP G G GE + G PG GD GRPG P
Sbjct: 469 VGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYP 528
Query: 718 GP---PGQVKVRNPPDGSSGR 771
GP PG+ PP GR
Sbjct: 529 GPRGTPGEKGEPGPPGPEGGR 549
Score = 95.1 bits (235), Expect = 2e-19
Identities = 65/199 (32%), Positives = 80/199 (40%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G +G+ G +G G KG G G G G PGP
Sbjct: 426 PRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGP------------EGPRGLAGEVGSKG 473
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G GL GP G G GE G++G RG+PG G G+ G GP G
Sbjct: 474 AKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKG-------------DP 520
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G+ G PG +G R G+ G+PG G G DPG PG GP+G
Sbjct: 521 GRPGFSYPGPRGTPGEKGEPGPPGPEGGRGDFGLKGTPGRKGDKGEPADPGPPGEPGPRG 580
Query: 541 KRGNQGPKGETGLMGPNGV 597
RG GP+GE G G G+
Sbjct: 581 PRGIPGPEGEPGPPGDPGL 599
Score = 94.4 bits (233), Expect = 4e-19
Identities = 67/201 (33%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G +G G G GE G++G +G+PGI G +G GP G G
Sbjct: 272 GYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGF---------------- 315
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA------PGSI 528
DG+ G PG G+ G G G IGP G KGDPG+ PG
Sbjct: 316 -----KGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGSRGPDGYPGEA 370
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRP 708
G G+RG+QG KG++G G G G+ G+ N G PG G G
Sbjct: 371 GSPGERGDQGAKGDSGRPGRRGPPGDPGD---------KGSKGYQGNNGAPGSPGVKGGK 421
Query: 709 GNPGPPGQVKVRNPPDGSSGR 771
G PGP G P G GR
Sbjct: 422 GGPGPRG-------PKGEPGR 435
Score = 77.0 bits (188), Expect = 6e-14
Identities = 49/139 (35%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPN 591
G +GEPG+ G+ KG G PG GP+G G G PG G +G+ G+ G KG GL G N
Sbjct: 281 GNMGEPGEPGQ---KGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKN 337
Query: 592 GVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI------------GDIGRPGNPGPPGQV 735
G G+ G+ G PG+ GD GRPG GPPG
Sbjct: 338 GTDGQKGKLGRIGPPGCKGDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPG-- 395
Query: 736 KVRNPPDGSSGRYKRSTRA 792
+P D S Y+ + A
Sbjct: 396 ---DPGDKGSKGYQGNNGA 411
>sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor
Length = 1804
Score = 129 bits (323), Expect = 1e-29
Identities = 91/266 (34%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVG---SPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
+G EG G QGPVG GE G G AGP+G PGP
Sbjct: 1042 KGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1101
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPG---IVGNMGERGPTGPIGIVXXXXXXXX 345
+ G GL GPAG G GE G++G+ G PG G+ GE GP GP G+
Sbjct: 1102 DGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGI 1161
Query: 346 XXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGP---VGNKGDPGA 516
+G G PG G L+G+ G PG G VG G PG
Sbjct: 1162 AGGDGEPGPRGQQGMFGQKGDEGARGFPGLPGPIGLQGLPGPPGEKGENGDVGPMGPPGP 1221
Query: 517 PGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
PG GPQG G GP+G G +G GVVG+ GE + GL G+ G+
Sbjct: 1222 PGPRGPQGPNGADGPQGPPGSIGSVGVVGDKGE---PGEAGNPGPPGEAGSGGLKGERGE 1278
Query: 697 IGRPGNPGPPGQVKVRNPP--DGSSG 768
G G PG G ++ PP DG G
Sbjct: 1279 KGEAGPPGAAGPAGIKGPPGDDGPKG 1304
Score = 122 bits (305), Expect = 2e-27
Identities = 88/266 (33%), Positives = 107/266 (40%), Gaps = 12/266 (4%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G+ G GP G GE GP GL GP G+PGP +
Sbjct: 629 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGPPGQPG---------------------IG 667
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G QGP G GPQGE G G +GNPG G G +GP GP G
Sbjct: 668 GIDGPQGPKGNMGPQGEPGPPGQQGNPGSQGLPGPQGPIGPPG---------------EK 712
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
DG G PG++G+ KG +G PG GP+G G G G+ G +G +
Sbjct: 713 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLK 772
Query: 547 GNQGPKGETGL------------MGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI 690
G++G KGE G G G VG GE G G+
Sbjct: 773 GSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEK 832
Query: 691 GDIGRPGNPGPPGQVKVRNPPDGSSG 768
G +G PG PG PG R P GS+G
Sbjct: 833 GKLGVPGLPGYPG----RQGPKGSTG 854
Score = 122 bits (305), Expect = 2e-27
Identities = 88/300 (29%), Positives = 116/300 (38%), Gaps = 9/300 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G G GPVG G+ GP G GP G G
Sbjct: 1296 PPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPG 1355
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PGK G G +G G QGE G +G+ G G G G GP GP G
Sbjct: 1356 PPGKRGPPGASGSEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVG 1415
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG KG+ KG G PG IG +G G+ G G G G
Sbjct: 1416 EQGLPGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1475
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G+ G KG+ G+ GP G +G G G GD G G PG PG
Sbjct: 1476 SQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPPG 1535
Query: 721 PPGQVKVRNPPDGSSGRYKRSTRA---------QSFGDINDALFEKVDKITNKIKKLRFP 873
PPG+V ++ P S + +R T + + D + +F ++ + I+ ++FP
Sbjct: 1536 PPGEV-IQPLPILSPKKTRRHTESIQGDAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFP 1594
Score = 121 bits (304), Expect = 2e-27
Identities = 91/268 (33%), Positives = 107/268 (39%), Gaps = 12/268 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G++G G KGE GP G AGP G GP
Sbjct: 1263 PPGEAGSGGLKGERGEKGEAGPPGAAGPAGIKGPPGDDGPKGNPGPVGFPGD-------- 1314
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G GPAG +G G+ GE GD G PG G GE GP GP G
Sbjct: 1315 -PGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGRQG 1373
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA------PG 522
G VG G G+ +G+ G P GPVG +G PGA PG
Sbjct: 1374 EKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIP---GPVGEQGLPGAAGQDGPPG 1430
Query: 523 SIGP------QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
+GP +G G++G KG GL+G G GE GE + G+PG
Sbjct: 1431 PLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGSQGSPGAKGDGGIPG 1490
Query: 685 DIGDIGRPGNPGPPGQVKVRNPPDGSSG 768
G IG PG PG PG + GSSG
Sbjct: 1491 PAGPIGPPGPPGLPGPAGPKG-NKGSSG 1517
Score = 119 bits (299), Expect = 8e-27
Identities = 87/263 (33%), Positives = 106/263 (40%), Gaps = 9/263 (3%)
Frame = +1
Query: 7 GVEGDLGIQG---PVGRKGE---IGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXX 168
G+ G +G+QG P G KGE +GP+G GP G GP
Sbjct: 1190 GLPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGVV 1249
Query: 169 XXXXLPGKAGLQGP---AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
PG+AG GP AG G +GE GE+G+ G PG G G +GP G G
Sbjct: 1250 GDKGEPGEAGNPGPPGEAGSGGLKGERGEKGEAGPPGAAGPAGIKGPPGDDGPKGNPGPV 1309
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
G+ G+PGQ G G G G GP G +G PGA
Sbjct: 1310 GFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGP---PGPSGEAGPPGPPGKRGPPGAS 1366
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
GS G QG++G +G G G G G VG G +GLPG G
Sbjct: 1367 GSEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQD 1426
Query: 700 GRPGNPGPPGQVKVRNPPDGSSG 768
G PG GPPG ++ P GS G
Sbjct: 1427 GPPGPLGPPGLPGLKGDP-GSKG 1448
Score = 117 bits (293), Expect = 4e-26
Identities = 86/261 (32%), Positives = 105/261 (40%), Gaps = 6/261 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G++G GP G G GP G AGP G PGP L
Sbjct: 793 KGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGP------------SGQAGEKGKLGVPGL 840
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGN---MGERGPTGPIGIVXXXXXXXXXXX 354
PG G QGP G G G G G++G GI G G+RGPTGP G
Sbjct: 841 PGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRG------------S 888
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSP---GTIGPVGNKGDPGAPGS 525
DG G PG++G + +G +G P G GP G G PG PG
Sbjct: 889 RGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQ 948
Query: 526 IGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
G G +G GP G G++GP G GE G +GLPG G G
Sbjct: 949 RGETGFQGKTGPPGPGGVVGPQGPTGETG---PIGERGHPGPPGPPGEQGLPGAAGKEGA 1005
Query: 706 PGNPGPPGQVKVRNPPDGSSG 768
G+PGP G + ++ P G G
Sbjct: 1006 KGDPGPQG-ISGKDGPAGIRG 1025
Score = 114 bits (285), Expect = 4e-25
Identities = 79/266 (29%), Positives = 97/266 (36%), Gaps = 24/266 (9%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G KG +GP G GP+G PGP
Sbjct: 728 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFK 787
Query: 187 GKAGLQG---------PAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXX 339
G GL+G P G +GP+G G G G+PG G GE+G G G+
Sbjct: 788 GDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 847
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
+ GK G GQ+G +G G+ G G G KG G
Sbjct: 848 GPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGD 907
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP------ 681
G GP G+RG QGP+G G GP G G G+ G P
Sbjct: 908 GPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTGPPGPGGVV 967
Query: 682 ---------GDIGDIGRPGNPGPPGQ 732
G IG+ G PG PGPPG+
Sbjct: 968 GPQGPTGETGPIGERGHPGPPGPPGE 993
Score = 112 bits (281), Expect = 1e-24
Identities = 90/292 (30%), Positives = 103/292 (35%), Gaps = 20/292 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGP---IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P+G G G GP G +G GP +G GP G PGP
Sbjct: 900 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTG 959
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERG------DRGNPGIVGNMGERGPTGPIGI----- 318
G G QGP G GP GE G G ++G PG G G +G GP GI
Sbjct: 960 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1019
Query: 319 -VXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKG---IMGSPGTIG 486
G VG PG++G G + G PG G
Sbjct: 1020 PAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQG 1079
Query: 487 PVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXX 666
P G G+ GAPG GPQG G G +G GL GP G G GE
Sbjct: 1080 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE---------DGDKGEIG 1130
Query: 667 NRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGRYKRSTRAQS--FGDIND 816
G G GD G G PGPPG P + G + R Q FG D
Sbjct: 1131 EPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGD 1182
Score = 110 bits (276), Expect = 4e-24
Identities = 81/261 (31%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G+ GD G +GP GR G G GL GP G+
Sbjct: 459 PSGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAIL 518
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
+ L+GP G G G G G G+ G G G+ GP GP G+
Sbjct: 519 QQARIALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPGPQGPRGVQGP----------- 567
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G+PG++G G G PG G G++G G PG G +G
Sbjct: 568 ----------------PGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGDKG 611
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD---IGRPG 711
RG +GP+G GL G +G+ GEDGE RGLPG+ G +G G
Sbjct: 612 HRGERGPQGPPGLPGDDGMRGEDGEIGP---------------RGLPGEAGPRGLLGPRG 656
Query: 712 NPGPPGQVKVR--NPPDGSSG 768
PGPPGQ + + P G G
Sbjct: 657 TPGPPGQPGIGGIDGPQGPKG 677
Score = 110 bits (274), Expect = 7e-24
Identities = 80/255 (31%), Positives = 97/255 (38%), Gaps = 12/255 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSP---------GPXXXXXXXXXXXXXXXXX 153
P G +G+ G QG G +G IGP G GP G P GP
Sbjct: 687 PPGQQGNPGSQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALG 746
Query: 154 XXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
PG G++G G G +G GE+G+ G PG G+MG +G G +G V
Sbjct: 747 PPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRG 806
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGE---PGQKGERFLKGIMGSPGTIGPVGNKG 504
GK+G PG G + KG G PG G G KG
Sbjct: 807 EDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 866
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
G G GP+G+RG GP+G G GP G G G RG G
Sbjct: 867 ARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG------TSGGDGPPGPPGERGPQG 920
Query: 685 DIGDIGRPGNPGPPG 729
G +G PG GPPG
Sbjct: 921 PQGPVGFPGPKGPPG 935
Score = 80.9 bits (198), Expect = 4e-15
Identities = 56/186 (30%), Positives = 70/186 (37%), Gaps = 9/186 (4%)
Frame = +1
Query: 199 LQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXX 378
++GP G GP G G G +G G+ G+ G+RGP G G+
Sbjct: 438 VEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRY 497
Query: 379 XXXXXXXXXLDGKVGEP---------GQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+ + + +G G+ G PG +G G+ G G G G
Sbjct: 498 GGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPG 557
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
PQG RG QGP G TG G G G DG GLPGD G G G
Sbjct: 558 PQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGDKGHRGERG 617
Query: 712 NPGPPG 729
GPPG
Sbjct: 618 PQGPPG 623
Score = 60.8 bits (146), Expect = 5e-09
Identities = 59/205 (28%), Positives = 71/205 (34%), Gaps = 25/205 (12%)
Frame = +1
Query: 232 GEAGERGDRGNPGIVG-NMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 408
G GE+G +G P +V M GP GP G
Sbjct: 418 GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPA----------------------------- 448
Query: 409 DGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG-------KRGNQGPKG 567
G +G PG +G G+ G PG GP G G PGA G GP G + G G KG
Sbjct: 449 -GLMGPPGLQGP---SGLPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKG 504
Query: 568 ET-----------------GLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
T L GP G +G G G PG G
Sbjct: 505 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPV---------------GGPGSTGA 549
Query: 697 IGRPGNPGPPGQVKVRNPPDGSSGR 771
G G+PGP G V+ PP G +G+
Sbjct: 550 KGESGDPGPQGPRGVQGPP-GPTGK 573
Score = 50.1 bits (118), Expect = 8e-06
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = +1
Query: 427 PGQKGER-FLKGIMGSPGTIGPVGNKGDPGA--PGSI--GPQGKRGNQGPKGETGLMGPN 591
PG E F + + G G G KG+P PG + GP G G G G GL GP+
Sbjct: 401 PGVPAETDFTETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPS 460
Query: 592 GVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
G+ G+ G+ G PG G G PG PG + R DGS G
Sbjct: 461 GLPGDPGDRGPP---------------GRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGP 505
Query: 772 YKRSTRAQS 798
+ AQ+
Sbjct: 506 TISAQEAQA 514
>sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor [Contains: Chondrocalcin]
Length = 1418
Score = 128 bits (321), Expect = 2e-29
Identities = 87/279 (31%), Positives = 108/279 (38%), Gaps = 23/279 (8%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGP------XXXXXXXXXXXXXXXXXXXX 162
P+G GD+G +GP G G+ G GL GP+G PGP
Sbjct: 694 PKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753
Query: 163 XXXXXXLPGKAGLQGPAGGN------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324
PG +G+ GP G + G QGEAG++GD G PG G G GP GP G+
Sbjct: 754 ERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTG 813
Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504
+G G PG G G G+ G GP G G
Sbjct: 814 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 873
Query: 505 DPGAPGSIGPQGKRGN---------QGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXX 657
+PG G GP G++G +GP G GL G G+VG G+
Sbjct: 874 EPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSG 933
Query: 658 XXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPP--DGSSG 768
+G PG GD G PG GPPG P +GS G
Sbjct: 934 EPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPG 972
Score = 122 bits (307), Expect = 1e-27
Identities = 89/261 (34%), Positives = 103/261 (39%), Gaps = 6/261 (2%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
QG+ G+ G G G KG+ G +G GP G+PG L
Sbjct: 680 QGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG---------------------L 718
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
G G GPAG NG +GE G G G+ G G GERG TGP G
Sbjct: 719 TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGT--------------- 763
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
DG+ G G++GE KG G+PG GP G G G G GP+G
Sbjct: 764 ------SGIAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGA 817
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP-- 717
RG QGP G TG G G VG G +G GD G GR G P
Sbjct: 818 RGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGL 877
Query: 718 ----GPPGQVKVRNPPDGSSG 768
GPPG+ K DG SG
Sbjct: 878 QGPAGPPGE-KGEPGDDGPSG 897
Score = 121 bits (304), Expect = 2e-27
Identities = 92/281 (32%), Positives = 109/281 (38%), Gaps = 26/281 (9%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G +G+ G GP GR GE G +G GP G PGP L
Sbjct: 68 RGDKGEKGAPGPRGRDGEPGTLGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQL 127
Query: 184 ---------PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXX 336
G G GPAG GPQG G G+ G PG+ G MG RGP GP G
Sbjct: 128 GVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPG------- 180
Query: 337 XXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGER---FLKGIMGSPGTIGPVGNKGD 507
DG+ G+PG+ GER +G G PGT G G KG
Sbjct: 181 --------------------KPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGH 220
Query: 508 PGAPGSIGPQGKRGNQGPKGETGL---------MGPNGVVGEDGEXXXXXXXXXXXXXXX 660
G PG G +G+ G G KGE+G MGP G+ GE G
Sbjct: 221 RGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQ 280
Query: 661 XXNRGLPGDIGDIGRPGNPGPPGQVKVRNP-----PDGSSG 768
G PG +G G PG PG PG P P+G+ G
Sbjct: 281 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQG 321
Score = 120 bits (301), Expect = 5e-27
Identities = 87/269 (32%), Positives = 100/269 (37%), Gaps = 12/269 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVG------------SPGPXXXXXXXXXXXXXX 144
P G G G G G KGE GP G GP G SPGP
Sbjct: 289 PVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPG 348
Query: 145 XXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324
PG G +GP G G G +G G PGI G GE+GP G G
Sbjct: 349 AKGSAGAPGIAGAPGFPGPRGPPDPQGATGPLGPKGQTGKPGIAGFKGEQGPKGEPGPA- 407
Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504
G G PG GE +G G PG +GP+G G
Sbjct: 408 -----------------------------GPQGAPGPAGEEGKRGARGEPGGVGPIGPPG 438
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
+ GAPG+ G G+ G GPKG G GP+G+ G G GLPG
Sbjct: 439 ERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKG---------ANGDPGRPGEPGLPG 489
Query: 685 DIGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
G GRPG+ GP G+V P G GR
Sbjct: 490 ARGLTGRPGDAGPQGKVGPSGAP-GEDGR 517
Score = 118 bits (296), Expect = 2e-26
Identities = 85/256 (33%), Positives = 97/256 (37%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G+ G+QGP G GE G G GP G+ GP
Sbjct: 868 PPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGER---- 923
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G GL GP+G G QG G GDRG PG VG G GP G G
Sbjct: 924 --GFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPG--------------- 966
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG+ G +KG G G +G G G PG+PG GP G
Sbjct: 967 ------------REGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTG 1014
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
K+G++G G G MGP+G G G RGL G G G G PG
Sbjct: 1015 KQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPG 1074
Query: 721 PPGQVKVRNPPDGSSG 768
PPG P G G
Sbjct: 1075 PPG-------PSGDQG 1083
Score = 115 bits (287), Expect = 2e-25
Identities = 81/252 (32%), Positives = 96/252 (38%), Gaps = 9/252 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G+ G G G KG G G+AG G PGP
Sbjct: 334 PAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPDPQGATGPLGPKGQTGKPGIAG 393
Query: 181 LPGKAGLQG------PAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
G+ G +G P G GP GE G+RG RG PG VG +G G G G
Sbjct: 394 FKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDG 453
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
+G G PG+ G +G+ G PG GP G G GAPG
Sbjct: 454 LAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPG 513
Query: 523 SIGPQGKRGNQGPKGETGLM---GPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
G G G QG +G+ G+M GP G GE G+ RGLPG G
Sbjct: 514 EDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGL------RGLPGKDG 567
Query: 694 DIGRPGNPGPPG 729
+ G G PGP G
Sbjct: 568 ETGAEGPPGPAG 579
Score = 115 bits (287), Expect = 2e-25
Identities = 85/266 (31%), Positives = 103/266 (38%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G G+ G G KG G G AG G PG
Sbjct: 523 PQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRG--------------------- 561
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
LPGK G G G GP G AGERG++G PG G G GP GP G
Sbjct: 562 LPGKDGETGAEGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPG---EGGKPGDQGVPG 618
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G+ G PG +G + +G+ G+PGT GP G G G PG+ GP G
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G G +G G+ GP G G+ GE RGL G IG G G G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG------GRGLTGPIGPPGPAGANG 732
Query: 721 PPGQVKVRNPPDGSSGRYKRSTRAQS 798
G+V P + R R ++
Sbjct: 733 EKGEVGPPGPAGSAGARGAPGERGET 758
Score = 113 bits (283), Expect = 6e-25
Identities = 81/243 (33%), Positives = 92/243 (37%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG+ G GI G G++GE G GL GP G PG
Sbjct: 904 PQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAG 963
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG+ G G G G G AG +GDRG G VG G GP G G
Sbjct: 964 EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAG 1023
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
+ G G G KGE G G G G G +G PG PG P G
Sbjct: 1024 AQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG---PSG 1080
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G GP G +G GP G VG G+ RG G+ G G PGNPG
Sbjct: 1081 DQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGP---RGRSGETGPAGPPGNPG 1137
Query: 721 PPG 729
PPG
Sbjct: 1138 PPG 1140
Score = 111 bits (278), Expect = 2e-24
Identities = 81/257 (31%), Positives = 93/257 (36%), Gaps = 15/257 (5%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G G QGP G G GP G GP G G P
Sbjct: 390 GIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFP 449
Query: 187 GKAGLQGPAGG---NGPQGEAGERGDRGNPG------------IVGNMGERGPTGPIGIV 321
G+ GL GP G GP G AG +G G+PG + G G+ GP G +G
Sbjct: 450 GQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVG-- 507
Query: 322 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNK 501
DG+ G PG +G R G+MG PG G G
Sbjct: 508 ----------------------PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEP 545
Query: 502 GDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP 681
G G G G G RG G GETG GP G G GE +G P
Sbjct: 546 GKAGEKGLPGAPGLRGLPGKDGETGAEGPPGPAGPAGE---------------RGEQGAP 590
Query: 682 GDIGDIGRPGNPGPPGQ 732
G G G PG PGPPG+
Sbjct: 591 GPSGFQGLPGPPGPPGE 607
Score = 110 bits (275), Expect = 5e-24
Identities = 83/258 (32%), Positives = 91/258 (35%), Gaps = 2/258 (0%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G QG G GE G G GP G PGP
Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGD-------------------- 184
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G+AG G AG GP G G RG G PG+ G G RG G G
Sbjct: 185 -DGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESG 243
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G+ G G G +G G PG GP G G G PG G G
Sbjct: 244 SPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPG 303
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
+G GP TG GP G G GE G+PG G G PG G
Sbjct: 304 AKGEAGP---TGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG 360
Query: 721 PPGQVKVRNPPD--GSSG 768
PG R PPD G++G
Sbjct: 361 APGFPGPRGPPDPQGATG 378
Score = 105 bits (261), Expect = 2e-22
Identities = 78/256 (30%), Positives = 98/256 (38%), Gaps = 12/256 (4%)
Frame = +1
Query: 1 PQGVEGDLG---------IQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXX 153
P+G GD G +G GR G+ GP G GP G+PG
Sbjct: 472 PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQ-- 529
Query: 154 XXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
PG G GP G NG G+AGE+G G PG+ G G+ G TG G
Sbjct: 530 ----------PGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAEGPPGPAG 579
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513
G+ G+PG +G + G G+PG +GP G +G PG
Sbjct: 580 PAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG---VPGEAGAPGLVGPRGERGFPG 636
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGL---PG 684
GS G QG +G +G G G GP G G G G+ G
Sbjct: 637 ERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKG 696
Query: 685 DIGDIGRPGNPGPPGQ 732
D GD+G G G PG+
Sbjct: 697 DRGDVGEKGPEGAPGK 712
Score = 104 bits (259), Expect = 4e-22
Identities = 82/268 (30%), Positives = 96/268 (35%), Gaps = 12/268 (4%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIG---------PIGLAGPVGSPGPXXXXXXXXXXXXXXXXXX 156
QGV G+ G G VG +GE G GL GP G PG
Sbjct: 614 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 673
Query: 157 XXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXX 336
+PG+ G G AG G +G+ GE+G G PG G G GP GP G
Sbjct: 674 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 733
Query: 337 XXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG---D 507
G+VG PG G +G G G GP G G
Sbjct: 734 K------------------------GEVGPPGPAGSAGARGAPGERGETGPPGTSGIAGP 769
Query: 508 PGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGD 687
PGA G G +G++G G KG+ G GP G G G G G
Sbjct: 770 PGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGF 829
Query: 688 IGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
G GR G PG G PP G SG+
Sbjct: 830 PGAAGRVGPPGSNGNPGPPGPP-GPSGK 856
Score = 102 bits (255), Expect = 1e-21
Identities = 82/259 (31%), Positives = 100/259 (38%), Gaps = 9/259 (3%)
Frame = +1
Query: 19 DLGIQGPVGRKGEIGPI-GLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKA 195
D+ GP G+KGE G I + GP G PGP
Sbjct: 27 DVRQPGPKGQKGEPGDIKDIVGPKGPPGP------------------------------- 55
Query: 196 GLQGPAGGNGPQGEAGERGDRGNP------GIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
QGPAG GP+G+ G++G++G P G G +G GP GP G
Sbjct: 56 --QGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTLGNPGPPGPPGPPGPPGLGGNFAAQ 113
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+ G +G G +G G G+PG G GN G+PG PG GP
Sbjct: 114 MAGGFDEKAGGAQLGVMQGPMGPMGPRGP---PGPAGAPGPQGFQGNPGEPGEPGVSGPM 170
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717
G RG GP G+ G G G G+ GE RG PG G G PG P
Sbjct: 171 GPRGPPGPPGKPGDDGEAGKPGKAGE------------------RGPPGPQGARGFPGTP 212
Query: 718 GPPGQVKVRNPP--DGSSG 768
G PG R P DG+ G
Sbjct: 213 GLPGVKGHRGYPGLDGAKG 231
Score = 91.3 bits (225), Expect = 3e-18
Identities = 62/192 (32%), Positives = 69/192 (35%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G G++G G G +G G GP GSPGP
Sbjct: 976 PPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAG 1035
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G G QGP G G GE GERG +G+ G G G GP GP G
Sbjct: 1036 ARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSG--------------- 1080
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG G G G PG IGP G +G G G GP G
Sbjct: 1081 ------DQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPG 1134
Query: 541 KRGNQGPKGETG 576
G GP G G
Sbjct: 1135 NPGPPGPPGPPG 1146
Score = 59.7 bits (143), Expect = 1e-08
Identities = 36/103 (34%), Positives = 42/103 (40%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G +G+ G G G KG G GL G G PGP
Sbjct: 1045 PRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSG 1104
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGP 309
G G+ GP G GP+G +GE G G PG G G GP GP
Sbjct: 1105 KDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGP 1147
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/101 (31%), Positives = 37/101 (36%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G++G G GP G +G GP G +GP G PGP P
Sbjct: 1068 GLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGP---------P 1118
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGP 309
G G G G GP G G G G PG +M GP
Sbjct: 1119 GPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGP 1159
>sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor
Length = 1838
Score = 128 bits (321), Expect = 2e-29
Identities = 90/266 (33%), Positives = 106/266 (39%), Gaps = 11/266 (4%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVG---SPGPXXXXXXXXXXXXXXXXXXXXXXXX 174
+G EG G GP G GE GP G AGP+G PGP
Sbjct: 1074 KGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1133
Query: 175 XXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERG------PTGPIGIVXXXXX 336
L G GL GPAG GP GE G++G+ G PG G+ G++G PTGP G +
Sbjct: 1134 DGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGP 1193
Query: 337 XXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA 516
G G PG G + L G G G G VG G PG
Sbjct: 1194 SGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGP 1253
Query: 517 PGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
PG GP G G GP+G G +G G VGE GE +G G+ G+
Sbjct: 1254 PGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGEKGE 1313
Query: 697 IGRPGNPGPPGQVKVRNPP--DGSSG 768
G G GPPG + PP DG G
Sbjct: 1314 SGPSGAAGPPGP---KGPPGDDGPKG 1336
Score = 123 bits (309), Expect = 6e-28
Identities = 85/254 (33%), Positives = 103/254 (40%), Gaps = 3/254 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G +G G VG KGE G G GP G GP
Sbjct: 1268 PQGPPGGIGNPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGE----------------- 1310
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G++G G AG GP+G G+ G +G+PG VG G+ GP G G
Sbjct: 1311 -KGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPA------------- 1356
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDP---GAPGSIG 531
G+ G PG KG+ G GSPG G G G P G PG G
Sbjct: 1357 -----------------GQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAG 1399
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P+G++G +G KGE GL GP G G G RG+PG +G+ G PG
Sbjct: 1400 PEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGL------RGIPGPVGEQGLPG 1453
Query: 712 NPGPPGQVKVRNPP 753
+PGP G PP
Sbjct: 1454 SPGPDGPPGPMGPP 1467
Score = 121 bits (303), Expect = 3e-27
Identities = 83/246 (33%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G G G GP+G GE G +G+ G G PG
Sbjct: 845 PKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG---RQGPKGSIGFPGFPGANGEKGGRG 901
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PGK G +G G GP+GE G RG G PG GN G GP GP G
Sbjct: 902 TPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPG------ERGPNGPQG 955
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
DG G PGQ+GE +G G PG G VG +G G G +G +G
Sbjct: 956 PTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERG 1015
Query: 541 KRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G GP GE GL G G G+ G +RGLPG +G +G G
Sbjct: 1016 HPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKG 1075
Query: 712 NPGPPG 729
N GPPG
Sbjct: 1076 NEGPPG 1081
Score = 119 bits (297), Expect = 1e-26
Identities = 84/254 (33%), Positives = 101/254 (39%), Gaps = 9/254 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G G GPVG G+ GP G GP G GP
Sbjct: 1328 PPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSG 1387
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGD---RGNPGIVGNMGERG------PTGPIGIVXXXX 333
PGK G GPAG G QGE G +G+ G PG G +G +G P G GI
Sbjct: 1388 PPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVG 1447
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513
L G G G+KG L G++G PG G G++G PG
Sbjct: 1448 EQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1507
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
GS GP+G++G GP G G GP G+ G G G G+ G
Sbjct: 1508 PQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGP---------TGPRGEAG 1558
Query: 694 DIGRPGNPGPPGQV 735
G PG PGPPG+V
Sbjct: 1559 HPGPPGPPGPPGEV 1572
Score = 117 bits (292), Expect = 6e-26
Identities = 88/263 (33%), Positives = 98/263 (37%), Gaps = 9/263 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +G G +G GP G GP+G PGP P
Sbjct: 1162 GEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFP 1221
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G GP GE GE GD G G G G RGP+G G
Sbjct: 1222 GPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV 1281
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG---APGSIGPQ 537
G+ G PG KGER KG G G GP G KG PG GS GP
Sbjct: 1282 GEKGEPGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPV 1341
Query: 538 GKRGNQGPKGETGLMG---PNGVVGEDGE---XXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
G G+ GP GE G G P G G+DGE RG PG G
Sbjct: 1342 GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPE 1401
Query: 700 GRPGNPGPPGQVKVRNPPDGSSG 768
GR G G G+ + PP G +G
Sbjct: 1402 GRQGEKGAKGEAGLEGPP-GKTG 1423
Score = 114 bits (286), Expect = 3e-25
Identities = 81/255 (31%), Positives = 103/255 (40%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
QG+ G G GP G KG +G GL G G+ GP
Sbjct: 729 QGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGY 788
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
PG G++G G G +G GE+G+ G PG G+MG +G G IG
Sbjct: 789 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 848
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
G +G PG+KG+ + G+ G PG GP G+ G PG PG+ G +G
Sbjct: 849 GGPNGDP---------GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGG 899
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGP 723
RG G G G GP G GE G G PG G+ G G GP
Sbjct: 900 RGTPGKPGPRGQRGPTGPRGERGPRGI---------------TGKPGPKGNSGGDGPAGP 944
Query: 724 PGQVKVRNPPDGSSG 768
PG+ + N P G +G
Sbjct: 945 PGE-RGPNGPQGPTG 958
Score = 114 bits (284), Expect = 5e-25
Identities = 85/275 (30%), Positives = 106/275 (38%), Gaps = 18/275 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+GV+G G G GR+G G G G G GP
Sbjct: 593 PRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAG--------------- 637
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
LPG+ G +G G +GP G G+ G+RG+ G VG G G GP G++
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPG 697
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGD------PGAPG 522
G+ G PGQ+G +G+ G G IGP G KG PG PG
Sbjct: 698 VTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPG 757
Query: 523 SIGPQGKRGNQGPKGE------------TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXX 666
+ GP G G +GP GE G GP GV G DG
Sbjct: 758 ADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPG 817
Query: 667 NRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
+G G GD G G PGP G+ + P+G GR
Sbjct: 818 FKGDMGIKGDRGEIGPPGPRGE----DGPEGPKGR 848
Score = 110 bits (274), Expect = 7e-24
Identities = 84/260 (32%), Positives = 95/260 (36%), Gaps = 5/260 (1%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +G+ G GP G GE GP G GP G PGP P
Sbjct: 931 GPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP---------------------P 969
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
GK GL G G G G G+ G G PG+VG G G TGP+G
Sbjct: 970 GKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGE---------------- 1013
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G G PG GE+ G PG G G KGDPG G G G
Sbjct: 1014 --------------RGHPGPPGPPGEQ------GLPGLAGKEGTKGDPGPAGLPGKDGPP 1053
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G +G G+ GL GP G +G G G G IG GRPG GPP
Sbjct: 1054 GLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPP 1113
Query: 727 GQVKVRNP-----PDGSSGR 771
G + P G +GR
Sbjct: 1114 GPAGEKGAPGEKGPQGPAGR 1133
Score = 108 bits (271), Expect = 1e-23
Identities = 87/285 (30%), Positives = 102/285 (35%), Gaps = 24/285 (8%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G GD G GP G G+ GP GL GP G PGP +
Sbjct: 661 GERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPG---------------------VT 699
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGI---------VGNMGERGPTGPIGIVXXXXXX 339
G G GP G GPQGE G G +GNPG +G GE+GP G G+
Sbjct: 700 GMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGAD 759
Query: 340 XXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP 519
G +G PG +G + GI G GT G G G PG
Sbjct: 760 GPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFK 819
Query: 520 GS---------IGPQGKRGNQGPKGETGLMGPNG------VVGEDGEXXXXXXXXXXXXX 654
G IGP G RG GP+G G GPNG GE G+
Sbjct: 820 GDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQ 879
Query: 655 XXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGRYKRSTR 789
+ G PG G G G G PG+ R + R +R R
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPR 924
Score = 107 bits (266), Expect = 6e-23
Identities = 82/259 (31%), Positives = 97/259 (37%), Gaps = 18/259 (6%)
Frame = +1
Query: 31 QGPVGRKGEIGPIGLAG---PVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGL 201
Q + +G GP+GL G PVG PG PG G
Sbjct: 552 QARLALRGPAGPMGLTGRPGPVGPPGSGGLKGE---------------------PGDVGP 590
Query: 202 QGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXX 381
QGP G GP G AG+ G RG G G G G TGP G
Sbjct: 591 QGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGP 650
Query: 382 XXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAP------------GS 525
DG+ G+ G+ G R L G G G +GP G G PG P G+
Sbjct: 651 SGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGN 710
Query: 526 IGPQGK---RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGD 696
+GPQG+ G QG G GL GP G +G GE G+PG G
Sbjct: 711 VGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLP---------GMPGADGP 761
Query: 697 IGRPGNPGPPGQVKVRNPP 753
G PG GPPG+ + PP
Sbjct: 762 PGHPGKEGPPGEKGGQGPP 780
Score = 103 bits (256), Expect = 8e-22
Identities = 88/274 (32%), Positives = 95/274 (34%), Gaps = 30/274 (10%)
Frame = +1
Query: 1 PQGVEGDLGIQGP---------VGRKGEIGP---IGLAGPVGSPGP-------------- 102
P G EG G+ GP VG GE GP GL G G PGP
Sbjct: 470 PPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGG 529
Query: 103 -XXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVG 279
L G AG G G GP G G G +G PG VG
Sbjct: 530 GDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVG 589
Query: 280 NMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKG 459
G RG GP G DG G PG+KG R G
Sbjct: 590 PQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPG 649
Query: 460 IMGSPGTIGPVGNKGDPGAPGSIGPQGK---RGNQGPKGETGLMGPNGVVGEDGEXXXXX 630
G PG G G +GD G G G GK RG GPKG G GP GV G DG+
Sbjct: 650 PSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGPPGPPGPPGVTGMDGQ----- 704
Query: 631 XXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQ 732
PG G++G G PGPPGQ
Sbjct: 705 ----------------PGPKGNVGPQGEPGPPGQ 722
Score = 94.0 bits (232), Expect = 5e-19
Identities = 67/207 (32%), Positives = 81/207 (39%), Gaps = 11/207 (5%)
Frame = +1
Query: 181 LPGKAGLQGPAGGNGPQ---------GEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
+ G G +GPAG GP G+ GERG G PG+ G G GP G + ++
Sbjct: 467 IEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRF 526
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG 513
++ G G G+ G PG +GP G+ G G
Sbjct: 527 GGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGP---MGLTGRPGPVGPPGSGGLKG 583
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
PG +GPQG RG QGP G G G G G DG GLPG+ G
Sbjct: 584 EPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643
Query: 694 DIGRPGNPGPPGQVKVRNPP--DGSSG 768
G PG GPPG PP DG G
Sbjct: 644 HRGDPGPSGPPG------PPGDDGERG 664
Score = 57.0 bits (136), Expect = 7e-08
Identities = 45/141 (31%), Positives = 52/141 (36%), Gaps = 25/141 (17%)
Frame = +1
Query: 406 LDGKVGEPGQKGERFL----------------KGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+ G GE GQKGE + G+ G PGT+GP G GDPG G G
Sbjct: 445 IGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRP 504
Query: 538 GKRGNQGPKGETGLM-------GPNGVVGEDGE--XXXXXXXXXXXXXXXXXNRGLPGDI 690
G G G G G M G G G G RG G +
Sbjct: 505 GLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPM 564
Query: 691 GDIGRPGNPGPPGQVKVRNPP 753
G GRPG GPPG ++ P
Sbjct: 565 GLTGRPGPVGPPGSGGLKGEP 585
Score = 30.4 bits (67), Expect = 6.8
Identities = 45/176 (25%), Positives = 48/176 (27%), Gaps = 6/176 (3%)
Frame = -1
Query: 767 PDDPSGGFLTLTCPGGPGFPGL--PISPISXXXXXXXXXXXXXXXXXXPAEPDSPSSPTT 594
P P G L PG PG+PG P I P PT
Sbjct: 857 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 916
Query: 593 PFGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFKNLSPFCPGSPTL 414
P G P P P P GP G P P PG L
Sbjct: 917 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGP--QGPTGFPGPKGPPGPPGKDGL 974
Query: 413 PSKXXXXXXXXXXXXXXXPDWPGCPLEPSGPTIPIGPVG----PLSPILPTIPGFP 258
P P PG + P GPT GP+G P P P G P
Sbjct: 975 PGHPGQRGETGFQGKTGPPGPPGV-VGPQGPTGETGPMGERGHPGPPGPPGEQGLP 1029
>sp|P02461|CO3A1_HUMAN Collagen alpha 1(III) chain precursor
Length = 1466
Score = 127 bits (320), Expect = 3e-29
Identities = 86/255 (33%), Positives = 100/255 (39%), Gaps = 12/255 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G LGI G G +G GP G+ GP GSPGP
Sbjct: 940 PPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQG 999
Query: 181 LPGKAGLQGPAG--GN----------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324
LPG AG G G GN G G G+RG+ G+PG G G GP GP+G
Sbjct: 1000 LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG 1059
Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504
G G+ G+ GER GI G G GN G
Sbjct: 1060 KSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGF---PGNPG 1116
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
PG+PG G QG G+ GP G G +GP+G G+DG RG G
Sbjct: 1117 APGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEG 1176
Query: 685 DIGDIGRPGNPGPPG 729
G G+PG PGPPG
Sbjct: 1177 SPGHPGQPGPPGPPG 1191
Score = 124 bits (311), Expect = 3e-28
Identities = 92/265 (34%), Positives = 101/265 (38%), Gaps = 8/265 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G G G KGE+GP G G G+PG
Sbjct: 334 PPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQ------------------- 374
Query: 181 LPGKAGLQGPAGG---NGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
G AG QGP G NG G GE G G PG G MG RGP GP G
Sbjct: 375 --GHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGA----------- 421
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+G GEPG +GER GI G PG G G G PG PG+ G
Sbjct: 422 ----NGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANG 477
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGED---GEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G G +G G G GPNG+ GE GE G+PG G G
Sbjct: 478 LPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRG 537
Query: 703 RPGNPGPPGQVKVRNPP--DGSSGR 771
PG+PG PG PP G SGR
Sbjct: 538 MPGSPGGPGSDGKPGPPGSQGESGR 562
Score = 116 bits (291), Expect = 7e-26
Identities = 89/264 (33%), Positives = 98/264 (37%), Gaps = 9/264 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G GI GP G GE G G GP G PG +
Sbjct: 783 GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVA 842
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERG---PTGPIGIVXXXXXXXXXXXX 357
G G GPAG GPQG GERG G PG G G RG P G G
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKD 902
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA------P 519
+ G G+ GQ GE+ G G PG GP+G G GA P
Sbjct: 903 GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962
Query: 520 GSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
G GP+G G QG KGE+G G NG+ GE G +GLPG G
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGP---------------QGLPGLAGTA 1007
Query: 700 GRPGNPGPPGQVKVRNPPDGSSGR 771
G PG G PG DG GR
Sbjct: 1008 GEPGRDGNPGS-------DGLPGR 1024
Score = 115 bits (287), Expect = 2e-25
Identities = 79/249 (31%), Positives = 92/249 (36%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G QGP G G+ GP G GP G+ GP P
Sbjct: 192 GSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGR------------P 239
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G+ GL GP G GP G G G +G+ G G GE+G TG G+
Sbjct: 240 GERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPM 299
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
L G G G G R G G PG G G G PGA G +GP G
Sbjct: 300 GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPP 726
G+ G G+ G GP G G G G PG G++G G PG P
Sbjct: 360 GSNGAPGQRGEPGPQGHAGAQGPPGPPGI------------NGSPGGKGEMGPAGIPGAP 407
Query: 727 GQVKVRNPP 753
G + R PP
Sbjct: 408 GLMGARGPP 416
Score = 115 bits (287), Expect = 2e-25
Identities = 82/260 (31%), Positives = 94/260 (36%), Gaps = 9/260 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G+ G G G G KGE GP G G G PG
Sbjct: 426 GLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER 485
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G +GPAG NG GE G G+RG PG G G G G G+
Sbjct: 486 GAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGP 545
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPG------TIGPVGNKGDPGAPGSI 528
G+ G PG G R G+MG PG G G +G PG PG
Sbjct: 546 GSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ 605
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLP---GDIGDI 699
GP GK G GP+G G GP G G+ G +GLP G G+
Sbjct: 606 GPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGL------------QGLPGTGGPPGEN 653
Query: 700 GRPGNPGPPGQVKVRNPPDG 759
G+PG PGP G P G
Sbjct: 654 GKPGEPGPKGDAGAPGAPGG 673
Score = 114 bits (286), Expect = 3e-25
Identities = 84/257 (32%), Positives = 96/257 (37%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G G GP G G GP G G G PGP
Sbjct: 604 PQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGP------------------------QG 639
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G G GP G NG GE G +GD G PG G G+ G G G
Sbjct: 640 LQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG +G +G +GSP GP G+KG+PG PG+ G G
Sbjct: 700 PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSP---GPKGDKGEPGGPGADGVPG 756
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
K G +GP G G GP G G+ GE RG PG+ G+ G PG G
Sbjct: 757 KDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGP------RGSPGERGETGPPGPAG 810
Query: 721 PPGQVKVRNPPDGSSGR 771
PG P G R
Sbjct: 811 FPGAPGQNGEPGGKGER 827
Score = 111 bits (278), Expect = 2e-24
Identities = 83/270 (30%), Positives = 101/270 (37%), Gaps = 14/270 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGP------IGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXX 162
P+G G +G GP G+ G+ G G+AGP GSPG
Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAG--------- 810
Query: 163 XXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXX 342
PG G G GG G +G GE+G+ G PG+ G G GP GP G
Sbjct: 811 ------FPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPG--------- 855
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPG--- 513
+ G+ G PG G G G PG G GN G PG
Sbjct: 856 ------------------PQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSG 897
Query: 514 APGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
+PG GP G GN G G G+ GP G G+ GE G+ G G
Sbjct: 898 SPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARG 957
Query: 694 DIGRPGNPGPPGQ-----VKVRNPPDGSSG 768
G PG PGP G VK + G++G
Sbjct: 958 LAGPPGMPGPRGSPGPQGVKGESGKPGANG 987
Score = 107 bits (268), Expect = 3e-23
Identities = 81/248 (32%), Positives = 91/248 (36%)
Frame = +1
Query: 10 VEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 189
V G G GP G G GP G +G GSPG PG
Sbjct: 166 VGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGE------------------PG 207
Query: 190 KAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXX 369
+AG GP G G G +G G G G G GERG GP GI
Sbjct: 208 QAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 267
Query: 370 XXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRG 549
G+ G PG KGE L G G+PG +GP G G+ G PG G G RG
Sbjct: 268 FDGRNGEK------GETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARG 321
Query: 550 NQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPG 729
N G +G G GP G G G G PG G G+ G PGP G
Sbjct: 322 NDGARGSDGQPGPPGPPGTAG------FPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQG 375
Query: 730 QVKVRNPP 753
+ PP
Sbjct: 376 HAGAQGPP 383
Score = 104 bits (259), Expect = 4e-22
Identities = 83/259 (32%), Positives = 100/259 (38%), Gaps = 3/259 (1%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G+ G GP G GP G G +G PGP
Sbjct: 553 PPGSQGESGRPGP---PGPSGPRGQPGVMGFPGP---------------------KGNDG 588
Query: 181 LPGKAGLQGPAGGNGPQ---GEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PGK G +G GG GPQ G+ GE G +G PG G G++G TGP G
Sbjct: 589 APGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPG------------ 636
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+GK GEPG KG+ G G G G G +G PG G+ G
Sbjct: 637 ---PQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPG 693
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
+G G GP+G G GP G G G G PG GD G PG
Sbjct: 694 LRGGAGPPGPEGGKGAAGPPGPPGAAG------TPGLQGMPGERGGLGSPGPKGDKGEPG 747
Query: 712 NPGPPGQVKVRNPPDGSSG 768
PG G V ++ P G +G
Sbjct: 748 GPGADG-VPGKDGPRGPTG 765
Score = 102 bits (255), Expect = 1e-21
Identities = 84/272 (30%), Positives = 95/272 (34%), Gaps = 17/272 (6%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPG-----------PXXXXXXXXXXXXXXXX 150
QG +G G GP G G G G+ G GSPG P
Sbjct: 102 QGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVK 161
Query: 151 XXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXX 330
PG AG GP G G G G G G G G G+ GP+GP G
Sbjct: 162 SGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPG----- 216
Query: 331 XXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDP 510
DG+ G PG+ GER G+ G PG GP G G P
Sbjct: 217 -------------PPGAIGPSGPAGKDGESGRPGRPGER---GLPGPPGIKGPAGIPGFP 260
Query: 511 GAPGSIGPQGKRGNQGP------KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNR 672
G G G G+ G +G KGE GL G NG G G R
Sbjct: 261 GMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGAR 320
Query: 673 GLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSG 768
G G G G+PG PGPPG P G+ G
Sbjct: 321 GNDGARGSDGQPGPPGPPGTAGFPGSP-GAKG 351
Score = 87.0 bits (214), Expect = 6e-17
Identities = 68/195 (34%), Positives = 76/195 (38%)
Frame = +1
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
P G QGP G GP G G GD PGI G G G GP GI
Sbjct: 99 PNGQGPQGPKGDPGPPGIPGRNGD---PGIPGQPGSPGSPGPPGI----CESCPTGPQNY 151
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
+ G G PG G G G PGT G G+ G PG G G G+
Sbjct: 152 SPQYDSYDVKSGVAVGGLAGYPGPAGP---PGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGP 723
G GP G G +GP+G G+DGE RGLPG G G G PG
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGE---------SGRPGRPGERGLPGPPGIKGPAGIPGF 259
Query: 724 PGQVKVRNPPDGSSG 768
PG +K DG +G
Sbjct: 260 PG-MKGHRGFDGRNG 273
Score = 62.4 bits (150), Expect = 2e-09
Identities = 53/192 (27%), Positives = 66/192 (34%), Gaps = 12/192 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G+ G+ G G AGP G+PGP +
Sbjct: 1047 GHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIK 1106
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G G G G G AG++G G+PG G G GP+GP G
Sbjct: 1107 GHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPG----------------- 1149
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSP------------GTIGPVGNKGDP 510
G +G PG +G R +G GSP G GP G
Sbjct: 1150 -------KDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPC--CGGV 1200
Query: 511 GAPGSIGPQGKR 546
GA G G++
Sbjct: 1201 GAAAIAGIGGEK 1212
Score = 58.5 bits (140), Expect = 2e-08
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 25/145 (17%)
Frame = +1
Query: 412 GKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG-----SIGPQ------------- 537
G G+PG G + G G PG G G+ G PG PG GPQ
Sbjct: 106 GPKGDPGPPG---IPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKS 162
Query: 538 -----GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G G GP G G GP G G G +G PG+ G G
Sbjct: 163 GVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGY------------QGPPGEPGQAG 210
Query: 703 RPGNPGPPGQVKVRNP--PDGSSGR 771
G PGPPG + P DG SGR
Sbjct: 211 PSGPPGPPGAIGPSGPAGKDGESGR 235
Score = 38.5 bits (88), Expect = 0.025
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 532 PQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
P +G QGPKG+ GP G+ G +G+ PG G G PG
Sbjct: 98 PPNGQGPQGPKGDP---GPPGIPGRNGD---------------------PGIPGQPGSPG 133
Query: 712 NPGPPG 729
+PGPPG
Sbjct: 134 SPGPPG 139
Score = 33.5 bits (75), Expect = 0.80
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 9/129 (6%)
Frame = -1
Query: 620 PDSPSSPTTP---FGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFK 450
P P++PT P GP P +PG PG P P +PG+P P
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKG--------------DPGPPGIPGRNGDPGIPGQPGSPGS 134
Query: 449 NLSP-FCPGSPTLPS----KXXXXXXXXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPLS- 288
P C PT P + +PG P+GP P GP G
Sbjct: 135 PGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPG----PAGPPGPPGPPGTSGH 190
Query: 287 PILPTIPGF 261
P P PG+
Sbjct: 191 PGSPGSPGY 199
Score = 32.3 bits (72), Expect = 1.8
Identities = 44/167 (26%), Positives = 50/167 (29%), Gaps = 6/167 (3%)
Frame = -1
Query: 767 PDDPSGGFLTLTCPGGPGFPGLPISPISXXXXXXXXXXXXXXXXXXPAEPDSPSSPTTP- 591
P P G PG PG PG P P +P SP SP P
Sbjct: 104 PQGPKGD------PGPPGIPGRNGDP------------------GIPGQPGSPGSPGPPG 139
Query: 590 ---FGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFPTGPIVPGEPIMPFKNLSPFCPGSP 420
P P + + G P GP PG P P + P PGSP
Sbjct: 140 ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGP--PGPPGPPGTSGHPGSPGSP 197
Query: 419 TLPSKXXXXXXXXXXXXXXXPDWPGCPLE--PSGPTIPIGPVGPLSP 285
PG P + PSGP P G +GP P
Sbjct: 198 GYQGP------------------PGEPGQAGPSGPPGPPGAIGPSGP 226
>sp|P25940|CO5A3_HUMAN Collagen alpha 3(V) chain precursor
Length = 1745
Score = 127 bits (319), Expect = 4e-29
Identities = 90/265 (33%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGP---VGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G +G+ G +GP G+ GE GP GL GP GSPGP
Sbjct: 576 PPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPG 635
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
PG+ G G G GPQG G G++G PG G G G GP+G
Sbjct: 636 EPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKG 695
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIG 531
+ G G G +GE+ KG G PG G VG KGD G PG+ G
Sbjct: 696 AQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPG 755
Query: 532 PQGKRGNQGPKGETGLMG---PNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
P+G+ G +GPKG+ G G P G GE G+ + G PG +G IG
Sbjct: 756 PRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIG 815
Query: 703 ---RPGNPGPPGQVKVRNPPDGSSG 768
+ G G PG R PP GS G
Sbjct: 816 EKGKSGKTGQPGLEGERGPP-GSRG 839
Score = 126 bits (316), Expect = 9e-29
Identities = 81/255 (31%), Positives = 105/255 (41%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G+ G GP G+ G GP+G GP G+ GP
Sbjct: 1039 KGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGP 1098
Query: 184 PGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXX 363
PG+ G++GPAG GP G G +G RG PG+ G G+ G G +G++
Sbjct: 1099 PGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGE 1158
Query: 364 XXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGK 543
G +G G G R +G GS GT G G G PGA G G +G
Sbjct: 1159 KGEVGDV---------GSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGD 1209
Query: 544 RGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGP 723
G+ GP G G+ GP G +GE G+ G G +G G PG+ GP
Sbjct: 1210 AGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGP 1269
Query: 724 PGQVKVRNPPDGSSG 768
PG V + DGS G
Sbjct: 1270 PGDPGV-SGIDGSPG 1283
Score = 120 bits (300), Expect = 7e-27
Identities = 86/260 (33%), Positives = 101/260 (38%), Gaps = 5/260 (1%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G+ GP G+ GE+GP+G GP G PGP
Sbjct: 911 GPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKE 970
Query: 187 GKAGLQG---PAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
G AGL+G P GG G G G +GD+G PG VG G G GP+G
Sbjct: 971 GPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPA------------ 1018
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
G +G PGQ G S G +GP G KG G G GP
Sbjct: 1019 ------------------GGIGLPGQSG---------SEGPVGPAGKKGSRGERGPPGPT 1051
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP 717
GK G GP G G G G GE+G+ ++G GD GD G PG P
Sbjct: 1052 GKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPG---------HKGSKGDKGDAGPPGQP 1102
Query: 718 GPPGQVKVRNPP--DGSSGR 771
G G PP DG+ GR
Sbjct: 1103 GIRGPAGHPGPPGADGAQGR 1122
Score = 118 bits (296), Expect = 2e-26
Identities = 85/247 (34%), Positives = 98/247 (39%), Gaps = 6/247 (2%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G +GP G KG GP G AGP G PGP L
Sbjct: 680 GPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRG---------------LQ 724
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G+ G +G G G +G+ G +GD+G PG G GE GP GP G
Sbjct: 725 GEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEK 784
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG------DPGAPGSI 528
G G PG G KG +G PG +GP+G KG PG G
Sbjct: 785 GKL------------GVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGER 832
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRP 708
GP G RG +G G TG GP G VG+DG +GLPG G G P
Sbjct: 833 GPPGSRGERGQPGATGQPGPKGDVGQDG------------APGIPGEKGLPGLQGPPGFP 880
Query: 709 GNPGPPG 729
G GPPG
Sbjct: 881 GPKGPPG 887
Score = 117 bits (294), Expect = 3e-26
Identities = 84/260 (32%), Positives = 101/260 (38%), Gaps = 12/260 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G+ G G++G G +G GP GL GP G PG
Sbjct: 492 PVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRG 551
Query: 181 LPGKAGLQGPAGGN---------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXX 333
G GL G G GP GE GERG G PG G GE GP G +G
Sbjct: 552 FDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPG 611
Query: 334 XXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFL---KGIMGSPGTIGPVGNKG 504
G G+ G G + L +G++G+PG GP GN G
Sbjct: 612 PTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPG 671
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
PG PGS GP G G++GP GE G GP G G G NRGL G
Sbjct: 672 IPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPG------YPGPRGVKGTSGNRGLQG 725
Query: 685 DIGDIGRPGNPGPPGQVKVR 744
+ G+ G G PG G V ++
Sbjct: 726 EKGEKGEDGFPGFKGDVGLK 745
Score = 116 bits (291), Expect = 7e-26
Identities = 81/266 (30%), Positives = 103/266 (38%), Gaps = 15/266 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGP---VGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P+G G G +GP G KG++G GL G G PGP
Sbjct: 765 PKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEK------- 817
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXX 351
GK+G G G G +G G RG+RG PG G G +G G G
Sbjct: 818 -----GKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPG 872
Query: 352 XXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSP------------GTIGPVG 495
DG+ G PGQ+GE +G G P G +GP+G
Sbjct: 873 LQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLG 932
Query: 496 NKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
+G PG PG G QG G +G +G G +GP G +G++G +G
Sbjct: 933 ERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGP---------KG 983
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNPP 753
PGD G G G+ GPPG V P
Sbjct: 984 GPGDPGPTGLKGDKGPPGPVGANGSP 1009
Score = 115 bits (288), Expect = 2e-25
Identities = 83/273 (30%), Positives = 102/273 (37%), Gaps = 17/273 (6%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGP---------------XXXXXXXXXXX 135
P+G GD G G G KG GP+G G G GP
Sbjct: 981 PKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKG 1040
Query: 136 XXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIG 315
+PG G GP G GP GE G++GD G PG G+ G++G GP G
Sbjct: 1041 SRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPG 1100
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG 495
G+ G PG G++ G+ G G IGP G
Sbjct: 1101 ------------QPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPG 1148
Query: 496 NKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
+G PG PG G G G+ GP G G GP G G +G RG
Sbjct: 1149 LQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERG 1208
Query: 676 LPGDIGDIGRPGNPGPPGQV--KVRNPPDGSSG 768
GD G G PG PGP G + K + P G++G
Sbjct: 1209 DAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAG 1241
Score = 111 bits (277), Expect = 3e-24
Identities = 78/251 (31%), Positives = 96/251 (38%), Gaps = 6/251 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGR---KGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXX 171
P G G G +GP G KG +GP GL G +G PG
Sbjct: 1236 PSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPG 1295
Query: 172 XXXLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGP---TGPIGIVXXXXXXX 342
G+ G GP G GP G G G G G G G GP TGP+G
Sbjct: 1296 PPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGA-------- 1347
Query: 343 XXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPG 522
G G G +G R + G +G PG +G G G PG G
Sbjct: 1348 ----------------------RGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLG 1385
Query: 523 SIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G G +G+ GPKGE G +G G++G GE ++GLPG G G
Sbjct: 1386 PSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKG------------DQGLPGVQGPPG 1433
Query: 703 RPGNPGPPGQV 735
G+PGPPG +
Sbjct: 1434 PKGDPGPPGPI 1444
Score = 110 bits (275), Expect = 5e-24
Identities = 78/250 (31%), Positives = 97/250 (38%), Gaps = 9/250 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G++G G +G G G GP G +G G+PGP
Sbjct: 1277 GIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPD 1336
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRG------NPGIVGNMGERGPTGPIGIVXXXXXXXXX 348
G G GP G GP G G G RG PG++G G+ GP GP+G
Sbjct: 1337 GPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLG----------- 1385
Query: 349 XXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI 528
L G G G+KG L G++G PG G G++G PG G
Sbjct: 1386 -------------PSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPP 1432
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDI---GDI 699
GP+G G GP G G GP GV G G+ ++G PG + GD
Sbjct: 1433 GPKGDPGPPGPIGSLGHPGPPGVAGPLGQ---------------KGSKGSPGSMGPRGDT 1477
Query: 700 GRPGNPGPPG 729
G G PGPPG
Sbjct: 1478 GPAGPPGPPG 1487
Score = 110 bits (274), Expect = 7e-24
Identities = 83/266 (31%), Positives = 102/266 (38%), Gaps = 15/266 (5%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G +G +G KG+ GP G AGP G GP
Sbjct: 1215 PPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGP-------------------------- 1248
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG+ G +G G G G+ G GD G GI G+ GE+G G +G
Sbjct: 1249 -PGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVG---------GPGPPG 1298
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGA---PGSIG 531
G +G G++GE KG G PG GP G G GA PG +G
Sbjct: 1299 ASGEPGAPGPPGKRGPSGHMGREGREGE---KGAKGEPGPDGPPGRTGPMGARGPPGRVG 1355
Query: 532 PQGKRGNQGPKGETGL------------MGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRG 675
P+G RG GP GE GL +GP+G+ G G+ G
Sbjct: 1356 PEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPG 1415
Query: 676 LPGDIGDIGRPGNPGPPGQVKVRNPP 753
G+ GD G PG GPPG PP
Sbjct: 1416 EAGEKGDQGLPGVQGPPGPKGDPGPP 1441
Score = 108 bits (269), Expect = 3e-23
Identities = 79/246 (32%), Positives = 95/246 (38%)
Frame = +1
Query: 31 QGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGP 210
Q + KG GP+GL G PGP LPG GL+G
Sbjct: 472 QTQLSMKGPPGPVGLTG---RPGPVG------------------------LPGHPGLKGE 504
Query: 211 AGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXX 390
G GPQG G +G G PG VG MG G G G+
Sbjct: 505 EGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQ 564
Query: 391 XXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGE 570
G+ G PG+ GER G+ G GP G G+PG G +GP RG+ GP G
Sbjct: 565 RGDFGHVGQPGPPGEDGER------GAEGPPGPTGQAGEPGPRGLLGP---RGSPGPTGR 615
Query: 571 TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNP 750
G+ G +G G G ++GLPG G IG PG GPPG +
Sbjct: 616 PGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGL 675
Query: 751 PDGSSG 768
P GS G
Sbjct: 676 P-GSDG 680
Score = 98.6 bits (244), Expect = 2e-20
Identities = 75/264 (28%), Positives = 91/264 (34%), Gaps = 21/264 (7%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G G G QG VG G GP G G G PGP
Sbjct: 391 EGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFA 450
Query: 184 PG---------------------KAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGP 300
G + ++GP G G G G G G+PG+ G G GP
Sbjct: 451 GGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGP 510
Query: 301 TGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGT 480
GP G+ L G G G +G L G+ G G
Sbjct: 511 QGPRGL------QGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQ 564
Query: 481 IGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXX 660
G G+ G PG PG G +G G GP G+ G GP G++G G
Sbjct: 565 RGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGID-- 622
Query: 661 XXNRGLPGDIGDIGRPGNPGPPGQ 732
G PG G++G PG PGPPGQ
Sbjct: 623 ----GAPGAKGNVGPPGEPGPPGQ 642
Score = 92.4 bits (228), Expect = 1e-18
Identities = 66/211 (31%), Positives = 84/211 (39%), Gaps = 6/211 (2%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G +G +GP GR G G G+ GPVG PG
Sbjct: 1338 PPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPG------------------------LLG 1373
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG+ G GP G +G G G+ G +G G +G +G GP G G
Sbjct: 1374 APGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAG--------------- 1418
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G G PG KG+ PG GP+G+ G PG PG GP G
Sbjct: 1419 ---------EKGDQGLPGVQGPPGPKGD---------PGPPGPIGSLGHPGPPGVAGPLG 1460
Query: 541 KRGNQ------GPKGETGLMGPNGVVGEDGE 615
++G++ GP+G+TG GP G G E
Sbjct: 1461 QKGSKGSPGSMGPRGDTGPAGPPGPPGAPAE 1491
Score = 87.4 bits (215), Expect = 5e-17
Identities = 66/204 (32%), Positives = 81/204 (39%), Gaps = 8/204 (3%)
Frame = +1
Query: 184 PGKAGLQGPAGGNGP---QGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXX 354
PG G+ GP+G GP G+ G G G PGI G G RGP G + ++
Sbjct: 397 PGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKG 456
Query: 355 XXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP 534
G PG G+ G PG +G G+ G G G+ GP
Sbjct: 457 PPVSFQQAQAQAVLQQTQLSMKGPPGP------VGLTGRPGPVGLPGHPGLKGEEGAEGP 510
Query: 535 QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGD---IGDIGR 705
QG RG QGP G G +G G G DG GLPG+ GD G
Sbjct: 511 QGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGH 570
Query: 706 PGNPGPPGQVKVRNP--PDGSSGR 771
G PGPPG+ R P G +G+
Sbjct: 571 VGQPGPPGEDGERGAEGPPGPTGQ 594
Score = 83.6 bits (205), Expect = 7e-16
Identities = 79/290 (27%), Positives = 96/290 (33%), Gaps = 33/290 (11%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P +E +GP G G P G+ GP G PGP
Sbjct: 381 PAVIEKGQQFEGPPGAPG---PQGVVGPSGPPGP-------------------------- 411
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIV---------------------------- 276
PG G GP G G G G G RG PG V
Sbjct: 412 -PGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVL 470
Query: 277 --GNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERF 450
+ +GP GP+G+ G G PG KGE
Sbjct: 471 QQTQLSMKGPPGPVGLTGRPGPV------------------------GLPGHPGLKGEEG 506
Query: 451 LKGIMGS---PGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXX 621
+G G G GP G G G PG+ G +G G+ GPKG+ G G G+ GE G+
Sbjct: 507 AEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRG 566
Query: 622 XXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSGR 771
RG G G G+ G PGP G + R P G +GR
Sbjct: 567 DFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSP-GPTGR 615
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/155 (29%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Frame = +1
Query: 412 GKVGEPG--QKGERFL--KGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGL 579
G GEP +KG++F G G G +GP G G PG PG GP G G G G G+
Sbjct: 376 GAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGI 435
Query: 580 MGPNGVV------------------GEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGR 705
GP G V + + GL G G +G
Sbjct: 436 RGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVGL 495
Query: 706 PGNPGPPGQVKVRNP--PDGSSGRYKRSTRAQSFG 804
PG+PG G+ P P G G + R G
Sbjct: 496 PGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMG 530
>sp|Q9JMH4|COHA1_MESAU Collagen alpha 1(XVII) chain (Bullous pemphigoid antigen 2) (180 kDa
bullous pemphigoid antigen 2)
Length = 1431
Score = 127 bits (319), Expect = 4e-29
Identities = 88/271 (32%), Positives = 111/271 (40%), Gaps = 17/271 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G +GD+G QGP G +G G G+ GP+G PGP
Sbjct: 573 GPKGDMGSQGPKGDRGLPGTAGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGLEGPM 632
Query: 187 GKAGLQGPAGGN--GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
G G GP G G +G AGE+G RG PG+ G++G RGP G G
Sbjct: 633 GPRGEPGPPGSGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSPG---PQGPPGSTGPQG 689
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G G G +GE+ +G+ G PG G G G+PGA G++GP G
Sbjct: 690 LRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMGPAG 749
Query: 541 KRGNQGPKGE---TGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPG 711
G QGP+GE TG+ G G+ G G+ + G PG G+ G PG
Sbjct: 750 PDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSPGRPGTKGEPGAPG 809
Query: 712 N------------PGPPGQVKVRNPPDGSSG 768
PGPPG PP G SG
Sbjct: 810 RVMTAEGSSTITVPGPPGPPGAMGPP-GPSG 839
Score = 105 bits (261), Expect = 2e-22
Identities = 88/278 (31%), Positives = 102/278 (36%), Gaps = 29/278 (10%)
Frame = +1
Query: 7 GVEGDLGI---QGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXX 177
G +GD GI QGP G G G +G GP GSPGP
Sbjct: 644 GEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSPGPQGPPGSTGPQGLRGEVGLPGVKGDK 703
Query: 178 XLPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXX 357
L G G +G G GP+G GE G RG PG VG G +G GP G
Sbjct: 704 GLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMGPAG---------PDGQQ 754
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI--- 528
L G G+PG+ G +G G PG+ G G KG+PGAPG +
Sbjct: 755 GPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSPGRPGTKGEPGAPGRVMTA 814
Query: 529 ------------GPQGKRGNQGPKGETGLMGPNGVV-------GEDGEXXXXXXXXXXXX 651
GP G G GP G G GP G+ GE G
Sbjct: 815 EGSSTITVPGPPGPPGAMGPPGPSGTPGPAGPAGLPGQTKAQRGEPGLAGDSFISSGSSI 874
Query: 652 XXXXXNRG--LPGDIGDIGRPGNPGP--PGQVKVRNPP 753
+G L G +G G G PGP PG R PP
Sbjct: 875 SEVLAAQGVDLRGPLGPPGPRGPPGPSIPGPPGPRGPP 912
Score = 99.0 bits (245), Expect = 2e-20
Identities = 69/202 (34%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Frame = +1
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G G +G G GP+G+ G G G PG +G+ G GP G G +
Sbjct: 568 LRGNPGPKGDMGSQGPKGDRGLPGTAGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRG 627
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDP---GAPGSIG 531
G+ G+ G GE+ +G+ G PG++GP G G P G PGS G
Sbjct: 628 LEGPMGPRGEPGPPG-SGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSPGPQGPPGSTG 686
Query: 532 PQGKRGN---QGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
PQG RG G KG+ GL GP G G+ GE RGLPG +G+ G
Sbjct: 687 PQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGV------RGLPGAVGEPG 740
Query: 703 RPGNPGPPGQVKVRNPPDGSSG 768
G GP G PDG G
Sbjct: 741 AKGAMGPAG-------PDGQQG 755
Score = 95.9 bits (237), Expect = 1e-19
Identities = 76/272 (27%), Positives = 96/272 (35%), Gaps = 21/272 (7%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG+ G++G+ G G KG GP G G G GP
Sbjct: 687 PQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGP---------------RGLTGEPGVRG 731
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
LPG G G G GP G G++G RG G+ G G RG GP
Sbjct: 732 LPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGP----------------- 774
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI---- 528
G+PG+ G +G G PG+ G G KG+PGAPG +
Sbjct: 775 -------------------SGDPGKPGVTGPQGPQGLPGSPGRPGTKGEPGAPGRVMTAE 815
Query: 529 --------GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
GP G G GP G +G GP G G G+ +
Sbjct: 816 GSSTITVPGPPGPPGAMGPPGPSGTPGPAGPAGLPGQTKAQRGEPGLAGDSFISSGSSIS 875
Query: 685 DI---------GDIGRPGNPGPPGQVKVRNPP 753
++ G +G PG GPPG + PP
Sbjct: 876 EVLAAQGVDLRGPLGPPGPRGPPGP-SIPGPP 906
Score = 79.3 bits (194), Expect = 1e-14
Identities = 78/280 (27%), Positives = 90/280 (32%), Gaps = 36/280 (12%)
Frame = +1
Query: 4 QGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXL 183
+G+ G G G G G GP GL G G PG
Sbjct: 769 RGLPGPSGDPGKPGVTGPQGPQGLPGSPGRPGTKGEPGAPGRVMTAEGSSTITVPGPPGP 828
Query: 184 PGKAGLQGPAGGNGPQGEAGERGD----RGNPGIVGN-----------------MGERGP 300
PG G GP+G GP G AG G RG PG+ G+ + RGP
Sbjct: 829 PGAMGPPGPSGTPGPAGPAGLPGQTKAQRGEPGLAGDSFISSGSSISEVLAAQGVDLRGP 888
Query: 301 TGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKG------ERFLKGI 462
GP G +G G PG G E F G
Sbjct: 889 LGPPG-----------PRGPPGPSIPGPPGPRGPPGEGVPGPPGLPGSFLTDSETFFSGP 937
Query: 463 MGSPGTIGPVGNKGDPGAPGSIGPQGKRGN---------QGPKGETGLMGPNGVVGEDGE 615
G PG GP G++GDPG PG+ G G + QGP G G GP G G+
Sbjct: 938 PGPPGPPGPKGDQGDPGVPGTPGIPGGHSHGESSSTTYRQGPPGPPGPPGPPGSFSSSGQ 997
Query: 616 XXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQV 735
G G PG PGPPG V
Sbjct: 998 DIQRYIAEYMQSDSIRTYLS-----GVQGPPGPPGPPGPV 1032
Score = 46.2 bits (108), Expect = 1e-04
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1
Query: 421 GEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGE 570
G PGQKGE G+PG G G G G PG GP+G++G++G KG+
Sbjct: 1373 GPPGQKGEA------GTPGPKGDRGLAGQRGPPGPPGPRGQKGDKGDKGD 1416
Score = 45.8 bits (107), Expect = 2e-04
Identities = 28/85 (32%), Positives = 35/85 (41%)
Frame = +1
Query: 61 GPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEA 240
GP G+ GP G PG +PG G +G AG GP+G+
Sbjct: 1334 GPPGVPGPQGPPG---ISKVFSAYSNVTQDLMDFFRTHGAIPGPPGQKGEAGTPGPKGDR 1390
Query: 241 GERGDRGNPGIVGNMGERGPTGPIG 315
G G RG PG G G++G G G
Sbjct: 1391 GLAGQRGPPGPPGPRGQKGDKGDKG 1415
Score = 45.4 bits (106), Expect = 2e-04
Identities = 30/92 (32%), Positives = 34/92 (36%)
Frame = +1
Query: 271 IVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERF 450
+ G G GP GP GI G+ G PG KG+R
Sbjct: 1332 VQGPPGVPGPQGPPGISKVFSAYSNVTQDLMDFFRTHGAIPGPPGQKGEAGTPGPKGDRG 1391
Query: 451 LKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
L G G PG GP G KGD G G G+R
Sbjct: 1392 LAGQRGPPGPPGPRGQKGDKGDKGDQVYTGRR 1423
Score = 42.7 bits (99), Expect = 0.001
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 484 GPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGE 615
GP G KG+ G PG G +G G +GP G G G G G+ G+
Sbjct: 1373 GPPGQKGEAGTPGPKGDRGLAGQRGPPGPPGPRGQKGDKGDKGD 1416
Score = 39.7 bits (91), Expect = 0.011
Identities = 71/313 (22%), Positives = 89/313 (28%), Gaps = 47/313 (15%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKG------------EIGPIGLAGPVGSPGPXXXXXXXXXXXXXX 144
P+G +GD G+ G G G GP G GP G PG
Sbjct: 946 PKGDQGDPGVPGTPGIPGGHSHGESSSTTYRQGPPGPPGPPGPPGSFSSSGQDIQRYIAE 1005
Query: 145 XXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEA----GERGDRGNPGIVGNMGERGPTGPI 312
+G+QGP G GP G GE D + + T
Sbjct: 1006 YMQSDSIRTYL-----SGVQGPPGPPGPPGPVITITGETFDYSQ--LASQVVSYLRTSGY 1058
Query: 313 GIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGE------------RFLK 456
G+ G G PG G+ R +
Sbjct: 1059 GVSLSSASSEDILAMLRRNDVWQFLRQHLVGPPGPPGPPGVGGDGSLLSLDYGELSRHIL 1118
Query: 457 GIMGSPG-TIGPVGNKGDPGAPGS-----------------IGPQGKRGNQGPKGETGLM 582
M S G + G G G PG PG+ IGP G G GP+G G+
Sbjct: 1119 NYMSSSGISFGHPGPPGPPGLPGTSYEELLTMLRGSDYRDIIGPPGPPGPPGPRGPPGVS 1178
Query: 583 GPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVR-NPPDG 759
+ + IG G PG GPPG +R N G
Sbjct: 1179 AALATYAAENSDNFRSELIGYLTSPDVRSF----IIGPPGPPGPQGPPGDSHLRDNYSWG 1234
Query: 760 SSGRYKRSTRAQS 798
SS +R T S
Sbjct: 1235 SSSSARRGTAYSS 1247
Score = 37.7 bits (86), Expect = 0.042
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 472 PGTIGPVGNKGDPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGE 606
PG G G G PG G G G+RG GP G G G G G+
Sbjct: 1372 PGPPGQKGEAGTPGPKGDRGLAGQRGPPGPPGPRGQKGDKGDKGD 1416
Score = 37.7 bits (86), Expect = 0.042
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 61 GPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEA 240
GP G G G+PGP G AG +GP G GP+G+
Sbjct: 1373 GPPGQKGEAGTPGPKGDR------------------------GLAGQRGPPGPPGPRGQK 1408
Query: 241 GERGDRGNPGIVG 279
G++GD+G+ G
Sbjct: 1409 GDKGDKGDQVYTG 1421
Score = 37.0 bits (84), Expect = 0.072
Identities = 54/235 (22%), Positives = 67/235 (28%), Gaps = 25/235 (10%)
Frame = +1
Query: 73 LAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQGPAGGNGPQGEAGERG 252
+ GP G PGP G+ G GG+ +G G
Sbjct: 1209 IIGPPGPPGPQGPPGDSHLRDNYSWGSSSSARRGTAYSSSVGMGGANGGSLGEGRTFGTG 1268
Query: 253 DRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPG 432
D G G + GP G G L +V E
Sbjct: 1269 DGGPYGT-----DIGPGGGYGAAAGGIYGTDGDSFRAGFTGDLDYNK----LAVRVSESM 1319
Query: 433 QKGERFLKG----IMGSPGTIGPVGNKG---------------------DPGAPGSIGPQ 537
Q+ + L+G + G PG GP G G PG G +
Sbjct: 1320 QR-QGLLQGMAYTVQGPPGVPGPQGPPGISKVFSAYSNVTQDLMDFFRTHGAIPGPPGQK 1378
Query: 538 GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
G+ G GPKG+ GL G G G G RG GD GD G
Sbjct: 1379 GEAGTPGPKGDRGLAGQRGPPGPPGP------------------RGQKGDKGDKG 1415
Score = 35.0 bits (79), Expect = 0.28
Identities = 23/85 (27%), Positives = 31/85 (36%)
Frame = +1
Query: 28 IQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQG 207
+QGP G G GP G++ + PG G +G
Sbjct: 1332 VQGPPGVPGPQGPPGISKVFSAYSNVTQDLMDFFRTHGAIPGPPGQKGEAGTPGPKGDRG 1391
Query: 208 PAGGNGPQGEAGERGDRGNPGIVGN 282
AG GP G G RG +G+ G G+
Sbjct: 1392 LAGQRGPPGPPGPRGQKGDKGDKGD 1416
Score = 33.5 bits (75), Expect = 0.80
Identities = 59/263 (22%), Positives = 72/263 (27%), Gaps = 50/263 (19%)
Frame = +1
Query: 187 GKAGLQGPAGGNGPQGE-------AGERGDRGNPGIVGNM----------GERGPTGPIG 315
G G GP G GP G A E D ++G + G GP GP G
Sbjct: 1161 GPPGPPGPPGPRGPPGVSAALATYAAENSDNFRSELIGYLTSPDVRSFIIGPPGPPGPQG 1220
Query: 316 IVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGT-IGPV 492
+ G G +G F G G GT IGP
Sbjct: 1221 PPGDSHLRDNYSWGSSSSARRGTAYSSSVGMGGANGGSLGEGRTFGTGDGGPYGTDIGPG 1280
Query: 493 GNKGDP-----GAPGSIGPQGKRGN---------------------------QGPKGETG 576
G G G G G G+ QGP G G
Sbjct: 1281 GGYGAAAGGIYGTDGDSFRAGFTGDLDYNKLAVRVSESMQRQGLLQGMAYTVQGPPGVPG 1340
Query: 577 LMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPD 756
GP G+ G PG G+ G PG G G R PP
Sbjct: 1341 PQGPPGISKVFSAYSNVTQDLMDFFRTHGAIPGPPGQKGEAGTPGPKGDRGLAGQRGPPG 1400
Query: 757 GSSGRYKRSTRAQSFGDINDALF 825
R ++ + GD D ++
Sbjct: 1401 PPGPRGQKGDK----GDKGDQVY 1419
Score = 32.3 bits (72), Expect = 1.8
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = +1
Query: 28 IQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKAGLQG 207
I GP G+KGE G GP G G L G+ G G
Sbjct: 1371 IPGPPGQKGEAGT---PGPKGDRG---------------------------LAGQRGPPG 1400
Query: 208 PAGGNGPQGEAGERGDR 258
P G G +G+ G++GD+
Sbjct: 1401 PPGPRGQKGDKGDKGDQ 1417
Score = 32.3 bits (72), Expect = 1.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGP 102
P G +G+ G GP KG+ G G GP G PGP
Sbjct: 1374 PPGQKGEAGTPGP---KGDRGLAGQRGPPGPPGP 1404
Score = 31.2 bits (69), Expect = 4.0
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = -1
Query: 521 PGAPGSPLFPTGPIVPGEPIMPFKNLSPFCPGSPTLPSKXXXXXXXXXXXXXXXPDWPGC 342
P P P P GP +PG P P PG P LP
Sbjct: 888 PLGPPGPRGPPGPSIPGPP-GPRGPPGEGVPGPPGLPGSFLTDSETFF------------ 934
Query: 341 PLEPSGPTIPIGPVGPL----SPILPTIPGFP 258
SGP P GP GP P +P PG P
Sbjct: 935 ----SGPPGPPGPPGPKGDQGDPGVPGTPGIP 962
>sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain
Length = 1049
Score = 127 bits (319), Expect = 4e-29
Identities = 90/268 (33%), Positives = 104/268 (38%), Gaps = 12/268 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G LGI G G +G GP G+ G GSPGP
Sbjct: 784 PPGAPGPLGIAGLTGARGLAGPPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQG 843
Query: 181 LPGKAGLQGPAG--GN----------GPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVX 324
LPG AG G G GN G G G+RG+ G+PG G G GP GP+G
Sbjct: 844 LPGLAGTAGEPGRDGNPGSDGLPGRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAG 903
Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKG 504
G G+ G+ GER G MG G G GN G
Sbjct: 904 KSGDRGETGPAGPSGAPGPAGSRGPPGPQGPRGDKGETGER---GAMGIKGHRGFPGNPG 960
Query: 505 DPGAPGSIGPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPG 684
PG+PG G QG G+ GP G G +GP+G G+DG NRG G
Sbjct: 961 APGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDG---ASGHPGPIGPPGPRGNRGERG 1017
Query: 685 DIGDIGRPGNPGPPGQVKVRNPPDGSSG 768
G G PG PGPPG P G+ G
Sbjct: 1018 SEGSPGHPGQPGPPGPPGAPGPCCGAGG 1045
Score = 114 bits (285), Expect = 4e-25
Identities = 86/261 (32%), Positives = 95/261 (36%), Gaps = 6/261 (2%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G G G G G G GP GSPGP P
Sbjct: 384 GSPGGPGSNGKPGPPGSQGETGRPGPPGSPGPRGQ------------------------P 419
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGI---VGNMGERGPTGPIGIVXXXXXXXXXXXX 357
G G GP G +G G+ GERG G PG G GE GP GP G
Sbjct: 420 GVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPP 479
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ 537
+GK GEPG KGE GI G G G G +G PGA G GP+
Sbjct: 480 GPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPR 539
Query: 538 GKRGNQGP---KGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRP 708
G G GP KG G GP G G G ++G PG G G P
Sbjct: 540 GGAGPPGPEGGKGAAGPPGPPGSAGTPGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAP 599
Query: 709 GNPGPPGQVKVRNPPDGSSGR 771
G GP G PP G +G+
Sbjct: 600 GKDGPRGPTGPIGPP-GPAGQ 619
Score = 114 bits (285), Expect = 4e-25
Identities = 93/284 (32%), Positives = 100/284 (35%), Gaps = 30/284 (10%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G GI GP G GE G G GP G PG
Sbjct: 627 GAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGAA 686
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGI---VXXXXXXXXXXXX 357
G AG GPAG GPQG GERG G PG G G RGP GP G
Sbjct: 687 GPAGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAPGKD 746
Query: 358 XXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVG------------NK 501
+ G G+ G GER G G PG GP+G
Sbjct: 747 GPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGARGLAGPP 806
Query: 502 GDPGAPGSIGPQG---KRGNQGPKGETGLMGP------------NGVVGEDGEXXXXXXX 636
G PGA GS GPQG + G GP G+ G GP G G DG
Sbjct: 807 GMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLP 866
Query: 637 XXXXXXXXXXNRGLPGDIGDIGRPGNPGPPGQVKVRNPPDGSSG 768
+RG G G G PG+PGPPG V P G SG
Sbjct: 867 GRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPV----GPAGKSG 906
Score = 113 bits (283), Expect = 6e-25
Identities = 76/252 (30%), Positives = 96/252 (38%), Gaps = 9/252 (3%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G +G+ G G G +G GP G+ GP G PG
Sbjct: 70 PSGKDGESGRPGRPGPRGFPGPPGMKGPAGMPG---FPGMKGHRGFDGRNGEKGEPGAPG 126
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G+ G+ G G GP G G G+RG PG+ G G RG G G
Sbjct: 127 LKGENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAG 186
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQ- 537
G G PGQ+GE +G G+PG GP G+ G PG G +GP
Sbjct: 187 FPGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAG 246
Query: 538 --------GKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIG 693
G RG GP G G+ G G GE G+ + G+ G G
Sbjct: 247 IPGAPGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKG 306
Query: 694 DIGRPGNPGPPG 729
+ G+ G+PG PG
Sbjct: 307 EDGKDGSPGEPG 318
Score = 112 bits (280), Expect = 1e-24
Identities = 79/244 (32%), Positives = 90/244 (36%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
PQG G G GP G G GP G G G PGP
Sbjct: 448 PQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGP------------------------QG 483
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
L G G GP G NG GE G +G+ G PGI G G+ G G G
Sbjct: 484 LQGLPGTSGPPGENGKPGEPGPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAG 543
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
G G PG +G + G G PG GP G+KG+PG+ G G G
Sbjct: 544 PPGPEGGKGAAGPPGPPGSAGTPGLQG---MPGERGGPGGPGPKGDKGEPGSSGVDGAPG 600
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
K G +GP G G GP G G+ GE RG G G G PG PG
Sbjct: 601 KDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPG 660
Query: 721 PPGQ 732
G+
Sbjct: 661 QNGE 664
Score = 110 bits (275), Expect = 5e-24
Identities = 79/258 (30%), Positives = 91/258 (35%), Gaps = 9/258 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G QGP G G+ GP G GP G+ GP P
Sbjct: 39 GAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGR---------------P 83
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G GP G GP G G G +G+ G G GE+G G G+
Sbjct: 84 GPRGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGEPGAPGLKGENGVPGEDGAPGPM 143
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGP---- 534
L G G G G R G G PG G G G PGA G +GP
Sbjct: 144 GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP 203
Query: 535 -----QGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDI 699
G+RG GP+G G GP G G DG PG G++
Sbjct: 204 GSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGS---------------------PGGKGEM 242
Query: 700 GRPGNPGPPGQVKVRNPP 753
G G PG PG + R PP
Sbjct: 243 GPAGIPGAPGLIGARGPP 260
Score = 110 bits (274), Expect = 7e-24
Identities = 76/243 (31%), Positives = 85/243 (34%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P G G G G G +G G G AGP G PGP
Sbjct: 31 PPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGR-------- 82
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G GP G GP G G G +G+ G G GE+G G G+
Sbjct: 83 -PGPRGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGEPGAPGLKGENGVPGEDGAPG 141
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
L G G G G R G G PG G G G PGA G +GP G
Sbjct: 142 PMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG 201
Query: 541 KRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNPG 720
G+ G G+ G GP G G G G+PG G IG G PG
Sbjct: 202 SPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGAPGLIGARGPPG 261
Query: 721 PPG 729
PPG
Sbjct: 262 PPG 264
Score = 107 bits (268), Expect = 3e-23
Identities = 83/268 (30%), Positives = 97/268 (36%), Gaps = 11/268 (4%)
Frame = +1
Query: 1 PQGVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXX 180
P+G +G+ G G G G+ GP G GP+G PGP
Sbjct: 583 PKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGA-------------- 628
Query: 181 LPGKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXX 360
PG G+ GP GG G +GE G G G PG G GE G G G
Sbjct: 629 -PGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGAAG 687
Query: 361 XXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQG 540
+ G+ G PG G G G G GP G+ G+PG PGS G G
Sbjct: 688 PAGGSGPAGPPGPQGVKGERGSPGGPGAA---GFPGGRGPPGPPGSNGNPGPPGSSGAPG 744
Query: 541 KRGNQGPKGET------GLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIG 702
K G GP G G+ GP G G GE GL G G G
Sbjct: 745 KDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGARGLAG 804
Query: 703 RPGNPGPPGQ-----VKVRNPPDGSSGR 771
PG PG G +K N G SG+
Sbjct: 805 PPGMPGARGSPGPQGIKGENGKPGPSGQ 832
Score = 103 bits (258), Expect = 5e-22
Identities = 82/256 (32%), Positives = 95/256 (37%), Gaps = 5/256 (1%)
Frame = +1
Query: 16 GDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLPGKA 195
G G GP G G GP G +G G+PG PG+
Sbjct: 15 GIAGYPGPAGPPGPPGPPGTSGHPGAPGAPGYQGP---------------------PGEP 53
Query: 196 GLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXXXXX 375
G GPAG GP G G G G G G G RG GP G+
Sbjct: 54 GQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPRGFPGPPGMKGPAGMPGFPGMKGHRGFD 113
Query: 376 XXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKRGNQ 555
G+ G PG KGE + G G+PG +GP G G+ G PG G G RGN
Sbjct: 114 GRNGEK------GEPGAPGLKGENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGND 167
Query: 556 GPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGN---PGPP 726
G +G G GP G G G + G PG G+ G G+ PGPP
Sbjct: 168 GARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAPGPP 227
Query: 727 GQVKVRNPP--DGSSG 768
G PP DGS G
Sbjct: 228 G------PPGSDGSPG 237
Score = 103 bits (257), Expect = 6e-22
Identities = 78/278 (28%), Positives = 88/278 (31%), Gaps = 18/278 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G G G G++GP G GP
Sbjct: 741 GAPGKDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGAR 800
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G AG G G G G G +G+ G PG G GERGP GP G+
Sbjct: 801 GLAGPPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNP 860
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
G GE G G G G PG +GP G GD G G GP G
Sbjct: 861 GSDGLPGRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAP 920
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGD------------- 687
G G +G G GP G GE GE G PG
Sbjct: 921 GPAGSRGPPGPQGPRGDKGETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPA 980
Query: 688 -----IGDIGRPGNPGPPGQVKVRNPPDGSSGRYKRST 786
+G G PG G G PP R +R +
Sbjct: 981 GPRGPVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGS 1018
Score = 103 bits (256), Expect = 8e-22
Identities = 80/255 (31%), Positives = 92/255 (36%), Gaps = 6/255 (2%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G +GE G G+AGP G G LP
Sbjct: 279 GKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANG---------------LP 323
Query: 187 GKAG------LQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXX 348
G AG +GPAG NG GE G GDRG PG P GP G+
Sbjct: 324 GAAGERGVPGFRGPAGANGLPGEKGPPGDRGGPG---------PAGPRGVA--------- 365
Query: 349 XXXXXXXXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSI 528
G+ G G G L+GI GSPG G G G PG+ G
Sbjct: 366 ---------------------GEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQGET 404
Query: 529 GPQGKRGNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRP 708
G G G+ GP+G+ G+MG G G DG G G+ G G P
Sbjct: 405 GRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPP 464
Query: 709 GNPGPPGQVKVRNPP 753
G GP G PP
Sbjct: 465 GPTGPSGDKGDTGPP 479
Score = 102 bits (255), Expect = 1e-21
Identities = 82/263 (31%), Positives = 93/263 (35%), Gaps = 8/263 (3%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G G G++GE GP G AG G PGP P
Sbjct: 198 GPAGSPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGA------P 251
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G +GP G G G G+RG G PG G G+ GP G G
Sbjct: 252 GLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGE---- 307
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSPGTIGPVGNKGDPGAPGSIGPQGKR 546
DGK G PG+ G L G G G G G G G PG GP G R
Sbjct: 308 --------------DGKDGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDR 353
Query: 547 GNQGPKGETGLMGPNGVVGEDGEXXXXXXXXXXXXXXXXXNRGLPGDIGDIGRPGNP--- 717
G GP G G+ G G G G G PG G+ GRPG P
Sbjct: 354 GGPGPAGPRGVAGEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQGETGRPGPPGSP 413
Query: 718 ---GPPGQVKVRNPP--DGSSGR 771
G PG + P DG+ G+
Sbjct: 414 GPRGQPGVMGFPGPKGNDGAPGK 436
Score = 61.6 bits (148), Expect = 3e-09
Identities = 51/182 (28%), Positives = 59/182 (32%), Gaps = 12/182 (6%)
Frame = +1
Query: 7 GVEGDLGIQGPVGRKGEIGPIGLAGPVGSPGPXXXXXXXXXXXXXXXXXXXXXXXXXXLP 186
G G G GP G+ G+ G G AGP G+PGP
Sbjct: 891 GHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAGSR------------------------ 926
Query: 187 GKAGLQGPAGGNGPQGEAGERGDRGNPGIVGNMGERGPTGPIGIVXXXXXXXXXXXXXXX 366
G G QGP G G GE G G +G+ G GN G G GP G
Sbjct: 927 GPPGPQGPRGDKGETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPV 986
Query: 367 XXXXXXXXXXXXXLDGKVGEPGQKGERFLKGIMGSP------------GTIGPVGNKGDP 510
G +G PG +G R +G GSP G GP G
Sbjct: 987 GPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAGGV 1046
Query: 511 GA 516
A
Sbjct: 1047 AA 1048
Score = 30.0 bits (66), Expect = 8.9
Identities = 39/127 (30%), Positives = 39/127 (30%), Gaps = 7/127 (5%)
Frame = -1
Query: 617 DSPSSPTTPFGPMRPVSXXXXXXXXXXXXPIEPGAPGSPLFP---TGPIVPGEPIMPFKN 447
D P PT P GP P E GAPG P GP GE P
Sbjct: 602 DGPRGPTGPIGPPGPAGQPGDKG--------ESGAPGVPGIAGPRGGPGERGEQGPPGPA 653
Query: 446 LSPFCPGSPTLPSKXXXXXXXXXXXXXXXPDWPGCPLEPSGPTIPIGPVGPL----SPIL 279
P PG P P G P SGP P GP G SP
Sbjct: 654 GFPGAPGQNGEPGAKGERGAPGEKGEGGPPGAAG-PAGGSGPAGPPGPQGVKGERGSPGG 712
Query: 278 PTIPGFP 258
P GFP
Sbjct: 713 PGAAGFP 719
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.310 0.145 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,152,185
Number of Sequences: 369166
Number of extensions: 1958375
Number of successful extensions: 70248
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15532
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)