Planaria EST Database

DrC_00106

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00106
         (1088 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q13042|CDC16_HUMAN  Cell division cycle protein 16 homolo...   234   3e-61
sp|Q8R349|CDC16_MOUSE  Cell division cycle protein 16 homolo...   231   3e-60
sp|P41889|CUT9_SCHPO  20S cyclosome/APC complex protein cut9...   159   2e-38
sp|P09798|CDC16_YEAST  Anaphase promoting complex subunit CD...   154   4e-37
sp|Q13099|IFT88_HUMAN  Intraflagellar transport 88 homolog (...    55   4e-07
sp|P38042|CDC27_YEAST  Anaphase promoting complex subunit CD...    55   4e-07
sp|O94556|CUT23_SCHPO  20S cyclosome/APC complex protein cut...    54   6e-07
sp|Q58208|Y798_METJA  Hypothetical protein MJ0798                  53   1e-06
sp|O82039|SPY_PETHY  Probable UDP-N-acetylglucosamine--pepti...    51   7e-06
sp|Q58823|YE28_METJA  Hypothetical protein MJ1428                  50   1e-05

>sp|Q13042|CDC16_HUMAN Cell division cycle protein 16 homolog (CDC16Hs) (Anaphase promoting
            complex subunit 6) (APC6) (Cyclosome subunit 6)
          Length = 620

 Score =  234 bits (597), Expect = 3e-61
 Identities = 124/358 (34%), Positives = 214/358 (59%), Gaps = 2/358 (0%)
 Frame = +3

Query: 9    LHSGNMLSANEAQIFLSSLDYSEIGNEKIAQLIKARYEDMFNIECETGKEHKLPMVDNIL 188
            L S +ML+A E +  L SL  S++ NE+  +L++  +E+    +     E  +P   + L
Sbjct: 170  LTSHHMLTAQEEKELLESLPLSKLCNEE-QELLRFLFENKLK-KYNKPSETVIPESVDGL 227

Query: 189  DEHYSNILNSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKLNNELFSF 368
             E+   +++ A R+Y N  FK  Y+LT  +++ DP + +C+ +H+  L EL   NELF  
Sbjct: 228  QENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYL 287

Query: 369  ASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFI-KATEIEKFFGYAWLAIGHTYSIQ 545
            +  L+D YP    SW+A+GCY L+ G+ N   ++++ KAT +EK +G AW+A GH+++++
Sbjct: 288  SHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE 347

Query: 546  KKSDQARAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDPYFWNE 725
             + DQA AAY +A Q ++G H+P+LYI LEY L NN+ L+  +  +A+ +   DP+  +E
Sbjct: 348  SEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHE 407

Query: 726  KGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLS-EFWEPLFNNIGHCFLKLGDYDKSLDF 902
             G ++F++  +  + K+FL+A E  K   N ++ + WEPL NN+GH   KL  Y ++LD+
Sbjct: 408  VGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDY 467

Query: 903  FRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKTLIKL 1076
             R+AL   P N +T +++   ++  G+   A +Y    LG+  ++ FS  +L   I++
Sbjct: 468  HRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEM 525

>sp|Q8R349|CDC16_MOUSE Cell division cycle protein 16 homolog (Anaphase promoting complex
            subunit 6) (APC6) (Cyclosome subunit 6)
          Length = 620

 Score =  231 bits (589), Expect = 3e-60
 Identities = 123/358 (34%), Positives = 214/358 (59%), Gaps = 2/358 (0%)
 Frame = +3

Query: 9    LHSGNMLSANEAQIFLSSLDYSEIGNEKIAQLIKARYEDMFNIECETGKEHKLPMVDNIL 188
            L S +ML+A E +  L SL  +++  E+  +L++  +E+    +     E  +P   + L
Sbjct: 170  LTSHHMLTAQEEKELLDSLPLNKLCAEE-QELLRFVFENKLK-KYNKPSETVIPESVDGL 227

Query: 189  DEHYSNILNSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKLNNELFSF 368
             E+   +++ A R+Y N  FK  Y+LT ++++ DP + NC+ +H+  L EL   NELF  
Sbjct: 228  QENLDVVVSLAERHYYNCDFKMCYKLTSTVMEKDPFHANCLPVHIGTLVELNKANELFYL 287

Query: 369  ASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFI-KATEIEKFFGYAWLAIGHTYSIQ 545
            +  L+D YP    SW+A+GCY L+ G+ N   ++++ KAT +EK +G AW+A GH+++++
Sbjct: 288  SHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE 347

Query: 546  KKSDQARAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDPYFWNE 725
             + DQA AAY +A Q ++G H+P+LYI LEY L NN+ L+  +  +A+ +   DP+  +E
Sbjct: 348  SEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFGQALSIAPEDPFVIHE 407

Query: 726  KGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLS-EFWEPLFNNIGHCFLKLGDYDKSLDF 902
             G ++F++  +  + K+FL+A E  K   N ++ + WEPL NN+GH   KL  Y ++LD+
Sbjct: 408  VGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDY 467

Query: 903  FRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKTLIKL 1076
             R+AL   P N +T +++   ++  G+   A +Y    LG+  ++ FS  +L   I++
Sbjct: 468  HRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEM 525

>sp|P41889|CUT9_SCHPO 20S cyclosome/APC complex protein cut9 (Cell untimely torn protein 9)
          Length = 671

 Score =  159 bits (401), Expect = 2e-38
 Identities = 102/366 (27%), Positives = 184/366 (50%), Gaps = 7/366 (1%)
 Frame = +3

Query: 6    KLHSGNMLSANEAQIFLSSLDYSEIGNEKIAQLIKARYEDMFNIECETGKEHKLPMVD-- 179
            +L S ++L+A+E    +  L+YS    E  A  +++ Y    N   +T  E +L   +  
Sbjct: 239  QLVSNHLLTADEEWDLVLKLNYSTYSKEDAA-FLRSLYMLKLN---KTSHEDELRRAEDY 294

Query: 180  ----NILDEHYSNILNSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKL 347
                N L++    +L  A   +  ++F     +T  IL+ DP+N +   LH+A L E   
Sbjct: 295  LSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGE 354

Query: 348  NNELFSFASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIG 527
             N+L+  ++ L+D +P+K  +W A+G Y L     + A + F K++ ++  FG AW+   
Sbjct: 355  KNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFA 414

Query: 528  HTYSIQKKSDQARAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHD 707
            H+++I+ + DQA +AY +A +  +G+H+P L++ +++    N  L+  YLQ +  +  +D
Sbjct: 415  HSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD 474

Query: 708  PYFWNEKGYLSFKHKNYSDSLKFFLNA-YEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDY 884
            P   NE G ++F   +   ++  F NA    KK + N   + W   + N+GH + KL  Y
Sbjct: 475  PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSN--EKPWAATWANLGHAYRKLKMY 532

Query: 885  DKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKT 1064
            D ++D   + L    N+     ++AL Y  K     A  +L   L I  N + +  LLK 
Sbjct: 533  DAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKR 592

Query: 1065 LIKLNA 1082
             ++ N+
Sbjct: 593  ALEENS 598

>sp|P09798|CDC16_YEAST Anaphase promoting complex subunit CDC16 (Cell division control
            protein 16)
          Length = 840

 Score =  154 bits (389), Expect = 4e-37
 Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 2/361 (0%)
 Frame = +3

Query: 3    QKLHSGNMLSANEAQIFLSSLDYSEIGNEK--IAQLIKARYEDMFNIECETGKEHKLPMV 176
            + L S N+L+  E      SLD+ E G +K  +  L K       N E  T K +++   
Sbjct: 397  EMLLSKNLLTPQEEWDLFDSLDFKEFGEDKEIMKNLYKINLSKYINTEDIT-KSNEILAK 455

Query: 177  DNILDEHYSNILNSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKLNNE 356
            D  L ++   + +     Y   KF +  EL +++L++D  N N +  ++  L EL   N+
Sbjct: 456  DYKLADNVDVVRSKVDICYTQCKFNECLELCETVLENDEFNTNILPAYIGCLYELSNKNK 515

Query: 357  LFSFASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIGHTY 536
            LF  +  L + +P    +W+++  Y +     + A + + K++ ++  F  AWL   HTY
Sbjct: 516  LFLLSHRLAETFPKSAITWFSVATYYMSLDRISEAQKYYSKSSILDPSFAAAWLGFAHTY 575

Query: 537  SIQKKSDQARAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDPYF 716
            +++ + DQA  AY +A++   G H+P L++ +++   N+  L+ +Y   A  +  +DP  
Sbjct: 576  ALEGEQDQALTAYSTASRFFPGMHLPKLFLGMQFMAMNSLNLAESYFVLAYDICPNDPLV 635

Query: 717  WNEKGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSL 896
             NE G + FK   +  + K+   A E  K + +  S     +  N+GH + KL + + ++
Sbjct: 636  LNEMGVMYFKKNEFVKAKKYLKKALEVVK-DLDPSSRTTISIQLNLGHTYRKLNENEIAI 694

Query: 897  DFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKTLIKL 1076
              FR  L K   N     SL   Y +   + +A ++L + L +  NN  +  LLK  ++L
Sbjct: 695  KCFRCVLEKNDKNSEIHCSLGYLYLKTKKLQKAIDHLHKSLYLKPNNSSATALLKNALEL 754

Query: 1077 N 1079
            N
Sbjct: 755  N 755

>sp|Q13099|IFT88_HUMAN Intraflagellar transport 88 homolog (Tetratricopeptide repeat protein
            10) (TPR repeat protein 10) (Recessive polycystic kidney
            disease protein Tg737 homolog)
          Length = 824

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 63/308 (20%), Positives = 115/308 (37%), Gaps = 39/308 (12%)
 Frame = +3

Query: 210  LNSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAIL-------------TELKLN 350
            +N A  Y     + +A E+ K + K D    +    +++ L              ++ +N
Sbjct: 419  INKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVN 478

Query: 351  NELFSFASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIGH 530
            ++ ++ A+       +K  + +A G Y      Y  AL+     TE       A   IG 
Sbjct: 479  SDRYNPAA-----LTNKGNTVFANGDYEKAAEFYKEALRNDSSCTE-------ALYNIGL 526

Query: 531  TYSIQKKSDQARAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDP 710
            TY    + D+A   +   +  +R S   L  IA  Y L  N   +I +L + + V   DP
Sbjct: 527  TYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDP 586

Query: 711  YFWNEKGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSL---------SEFWEPLFN----- 848
               ++ G L  +  + S + +++  +Y         +         ++FWE         
Sbjct: 587  QVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERA 646

Query: 849  ------------NIGHCFLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSE 992
                         +  CF + G+Y K+LD ++    K P N   L  L       G + +
Sbjct: 647  SLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDLG-LKD 705

Query: 993  AQNYLERV 1016
            AQ Y  ++
Sbjct: 706  AQEYARKL 713


 Score = 37.4 bits (85), Expect = 0.076
 Identities = 28/136 (20%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
 Frame = +3

Query: 624  IALEYSLDNNTCLSINYLQEAMK--VGSHDPYFWNEKGYLSFKHKNYSDSLKFFLNAYEA 797
            +A +YS++     ++N  Q  +K  + S+        G +  K +NYS ++KF+  A + 
Sbjct: 203  LASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQ 262

Query: 798  KKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARK 977
              +    +      +  NIG  F++ G Y  +++ +   +   PN     N L + Y   
Sbjct: 263  VPSVNKQMRI---KIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGYN-LTICYFAI 318

Query: 978  GDVSEAQNYLERVLGI 1025
            GD  + +   ++++ +
Sbjct: 319  GDREKMKKAFQKLITV 334


 Score = 35.0 bits (79), Expect = 0.38
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = +3

Query: 849  NIGHCFLKLGDYDKSLDFFRKALGKKPN-----NPTTLNSLALAYARKGDVSEAQNYLER 1013
            N+G+ +LK  +Y K++ F+R AL + P+         + ++ + + + G  S+A N  E 
Sbjct: 238  NMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEH 297

Query: 1014 VLGIDDN 1034
            ++ +  N
Sbjct: 298  IMSMAPN 304

>sp|P38042|CDC27_YEAST Anaphase promoting complex subunit CDC27 (Cell division control
           protein 27) (Anaphase promoting complex subunit 3)
          Length = 758

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 26/74 (35%), Positives = 43/74 (58%)
 Frame = +3

Query: 363 SFASGLIDNYPDKKESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIGHTYSI 542
           + A+GL+D  P+K E+W  IG    +  +++ A++ F KAT+++  F YA+   GH +S 
Sbjct: 527 NLANGLMDTMPNKPETWCCIGNLLSLQKDHDAAIKAFEKATQLDPNFAYAYTLQGHEHSS 586

Query: 543 QKKSDQARAAYCSA 584
              SD A+  Y  A
Sbjct: 587 NDSSDSAKTCYRKA 600

>sp|O94556|CUT23_SCHPO 20S cyclosome/APC complex protein cut23 (Anaphase promoting factor
            component 8) (Cell untimely torn protein 23)
          Length = 565

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 7/286 (2%)
 Frame = +3

Query: 231  YNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKLNNELFSFA--SGLIDNYPDKK 404
            Y++  F +A  L ++IL +DP+  + +  +  +L  L+  ++L   A  +  ID +  + 
Sbjct: 281  YDSRDFDEAESLFENILTNDPYRLDDMDTYSNVLFVLENKSKLGFLAQVASSIDKF--RP 338

Query: 405  ESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIGHTYSIQKKSDQARAAYCSA 584
            E+   IG Y  +   +  A+  F +A ++ + +  AW  +GH Y   K +  A  +Y  A
Sbjct: 339  ETCSIIGNYYSLLSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLA 398

Query: 585  NQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDPYFWNEKGYLSFKHKNYSD 764
                R  +     +   Y + +    ++ Y Q A  +  +D   W   G    K     +
Sbjct: 399  VDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRPYDQRMWQALGNCYEKIDRPQE 458

Query: 765  SLKFFLNAYEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSLDFFRKALGKKPN--NP 938
            ++K +  A    +   + L          +G+ + +L D + +   +++ +  +    +P
Sbjct: 459  AIKSYKRALLGSQTNSSILV--------RLGNLYEELQDLNSAASMYKQCIKTEETEISP 510

Query: 939  TTLNS---LALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKTL 1067
             T+ +   LA     K +  EA+ YL  VL  D     ++ LL+ L
Sbjct: 511  ETIKARIWLARWELGKKNYREAELYLSEVLNGDLELEEAKALLREL 556

>sp|Q58208|Y798_METJA Hypothetical protein MJ0798
          Length = 334

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 39/189 (20%), Positives = 88/189 (46%)
 Frame = +3

Query: 453  NLALQQFIKATEIEKFFGYAWLAIGHTYSIQKKSDQARAAYCSANQAIRGSHIPLLYIAL 632
            +LA++ F KA+E ++    A   +G +Y +   +  +   Y      +  + +  L    
Sbjct: 152  DLAIKYFEKASEKDRNNYKALFGLGKSYYLMSDNKNS-IKYFEKVLELNPNDVEALEYLG 210

Query: 633  EYSLDNNTCLSINYLQEAMKVGSHDPYFWNEKGYLSFKHKNYSDSLKFFLNAYEAKKNEF 812
            E   + +   +INY ++A+++   D     +  +  FK K Y  +LK+F  A +   N F
Sbjct: 211  ELYYEEDCEKAINYFKKALELKPDDIDLILKVAFTYFKLKKYKHALKYFEKALKLNPNVF 270

Query: 813  NSLSEFWEPLFNNIGHCFLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSE 992
                   E ++ ++G  ++ LG+ +K+++ F K       +      +AL Y   G++ +
Sbjct: 271  E-----LEQIYESMGRIYIYLGEDEKAIECFEKLKEINLYHYEIYEIIALTYEEVGNIEK 325

Query: 993  AQNYLERVL 1019
            A+ + ++++
Sbjct: 326  AKEFYKKLV 334


 Score = 40.0 bits (92), Expect = 0.012
 Identities = 29/113 (25%), Positives = 51/113 (45%)
 Frame = +3

Query: 723  EKGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSLDF 902
            +KGY   K      ++K+F  A E  +N + +L          +G  +  + D   S+ +
Sbjct: 140  KKGYALLKLYKRDLAIKYFEKASEKDRNNYKALF--------GLGKSYYLMSDNKNSIKY 191

Query: 903  FRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLK 1061
            F K L   PN+   L  L   Y  + D  +A NY ++ L +  +++   L+LK
Sbjct: 192  FEKVLELNPNDVEALEYLGELYYEE-DCEKAINYFKKALELKPDDI--DLILK 241


 Score = 39.7 bits (91), Expect = 0.015
 Identities = 26/101 (25%), Positives = 46/101 (45%)
 Frame = +3

Query: 732  YLSFKHKNYSDSLKFFLNAYEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSLDFFRK 911
            YL   +KN   S+K+F    E   N+  +L    E  +           D +K++++F+K
Sbjct: 180  YLMSDNKN---SIKYFEKVLELNPNDVEALEYLGELYYEE---------DCEKAINYFKK 227

Query: 912  ALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDN 1034
            AL  KP++   +  +A  Y +      A  Y E+ L ++ N
Sbjct: 228  ALELKPDDIDLILKVAFTYFKLKKYKHALKYFEKALKLNPN 268

>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SPINDLY (PhSPY)
          Length = 932

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 18/282 (6%)
 Frame = +3

Query: 228  YYNNAKFKKAYELTKSILKDDPHNPNCITLHVAILTELKLNNELFSFASGLIDNYPD--K 401
            Y +  +  +A E  +  LK DP           +LT++  + +L   +   I  Y +  K
Sbjct: 126  YKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLKLAGNSQEGIQKYYEAIK 185

Query: 402  KESWYAIGCYSLVTG-----NYNLALQQFIKATEIEKFFGYAWLAIGHTYSIQKKSDQAR 566
             +S YA   Y+L         Y++AL  + KA      +  A+  +G  Y  +   + A 
Sbjct: 186  IDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAI 245

Query: 567  AAY-----CSANQAIRGSH--IPLLYIALEYSLDNNTCLSINYLQEAMKVGSHDPYFWNE 725
            A Y      S N  I  ++  I L  +  +  L+ +    + Y ++A+       Y W+ 
Sbjct: 246  ACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALY------YNWHY 299

Query: 726  KGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLSEFWEP----LFNNIGHCFLKLGDYDKS 893
               +      Y + LKF +         F  L+  + P      NN+G  +    + DK+
Sbjct: 300  ADAMYNLGVAYGEMLKFDMAIV------FYELAFHFNPHCAEACNNLGVIYKDRDNLDKA 353

Query: 894  LDFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVL 1019
            ++ ++ AL  KPN   +LN+L + Y  +G +  A + +E+ +
Sbjct: 354  VECYQMALTIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAI 395


 Score = 41.6 bits (96), Expect = 0.004
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
 Frame = +3

Query: 489  IEKFFGYAWLAIGHTYSIQKKSDQARAAYCSANQAIR---GSHIPLLYIALEYSLDNNTC 659
            ++K  G     IG    +Q ++   R A+ S  +AI+    +   L +  + Y  +    
Sbjct: 75   LQKDSGSIESLIGKGICLQMQN-MGRLAFESFAEAIKLDPQNACALTHCGILYKDEGRLV 133

Query: 660  LSINYLQEAMKVGSHDPYFWNEKGYLSFKHKNYSDSLKFFLNAYEA--KKNEFNSLSEFW 833
             +    Q+A+K    DP +      L+    +   SLK   N+ E   K  E   +   +
Sbjct: 134  EAAESYQKALKA---DPSYKPAAECLAIVLTDIGTSLKLAGNSQEGIQKYYEAIKIDSHY 190

Query: 834  EPLFNNIGHCFLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLER 1013
             P + N+G  + ++  YD +L+ + KA  ++P       ++ + Y  +GD+  A    ER
Sbjct: 191  APAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYER 250

Query: 1014 VLGIDDN 1034
             L +  N
Sbjct: 251  CLAVSPN 257

>sp|Q58823|YE28_METJA Hypothetical protein MJ1428
          Length = 567

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 30/299 (10%)
 Frame = +3

Query: 213  NSATRYYNNAKFKKAYELTKSILKDDPHNPNCITLHVAI---LTELKLNNELFSFASGLI 383
            N A   Y+  K+  A E     LK  P N     L   I     E+ L  +    AS  I
Sbjct: 53   NLAYALYHLEKYDSALEAINEALKISPSNIYFAYLKGLIHYKRGEIILAYKYLKKASEKI 112

Query: 384  DNYPDKKESWYAIGCYSLVTGNYNLALQQFIKATEIEKFFGYAWLAIGHTYSIQKKSDQA 563
             N    +E +  +G  S+  G Y  AL+ ++K+ ++                    S   
Sbjct: 113  KN----EELFEILGDISVKYGRYEEALKYYLKSYKMAN------------------SKNL 150

Query: 564  RAAYCSANQAIRGSHIPLLYIALEYSLDNNTCLSINYLQEAMK--VGSHDPYFWNEKGYL 737
             A + +    +    I   Y A    L  N       + E M+  V + + Y     G  
Sbjct: 151  NALFKAGKIYLLFGDIDKAYDAFNEILQQNPSHECKKIVECMENVVNAINSYEDLNNGLT 210

Query: 738  SFKHKNYSDSLKFFLNAYEAKKNEFNS------LSEFWEP-------------LFNNI-- 854
              K+K+Y  +LK F    +  +N   S      ++E +E              +FN    
Sbjct: 211  MIKNKDYIGALKIFNKVLQIDENSDISYYYKSVIAEIFEEYKKALEYIDKSISIFNRSLY 270

Query: 855  ----GHCFLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVL 1019
                G    KLGD + +++ + KA+     NP     LA+ Y RKG++ ++ N+ ++VL
Sbjct: 271  YAKKGDILYKLGDEEGAIEAYNKAIKLNSQNPYAYFGLAILYYRKGELEKSSNFFDKVL 329


 Score = 41.2 bits (95), Expect = 0.005
 Identities = 29/112 (25%), Positives = 54/112 (48%)
 Frame = +3

Query: 750  KNYSDSLKFFLNAYEAKKNEFNSLSEFWEPLFNNIGHCFLKLGDYDKSLDFFRKALGKKP 929
            K Y +++K+  N    + +     S +W       G+ + KLG+Y  + + F  AL   P
Sbjct: 360  KYYHEAMKYVDNLINLENS-----SRWWYVK----GYIYYKLGNYKDAYESFMNALRVNP 410

Query: 930  NNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLFSQLLLKTLIKLNAK 1085
             + +TL SLA+   + G + EA     ++L I ++  F+  +   L KL ++
Sbjct: 411  KDISTLKSLAIVLEKSGKIDEAITTYTKILKIVNSLQFTCEIDNILEKLRSR 462


 Score = 33.1 bits (74), Expect = 1.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 864  FLKLGDYDKSLDFFRKALGKKPNNPTTLNSLALAYARKGDVSEAQNYLERVLGIDDNNLF 1043
            +L  G YDK+++ + KAL KK  NP    +LA A         A   +   L I  +N++
Sbjct: 24   YLDEGIYDKAVECYLKALEKKNTNPIDWFNLAYALYHLEKYDSALEAINEALKISPSNIY 83


 Score = 33.1 bits (74), Expect = 1.4
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +3

Query: 672 YLQEAMKVGSH------DPYFWNEKGYLSFKHKNYSDSLKFFLNAYEAKKNEFNSLSEFW 833
           Y  EAMK   +         +W  KGY+ +K  NY D+ + F+NA      + ++L    
Sbjct: 361 YYHEAMKYVDNLINLENSSRWWYVKGYIYYKLGNYKDAYESFMNALRVNPKDISTL---- 416

Query: 834 EPLFNNIGHCFLKLGDYDKSLDFFRKAL 917
                ++     K G  D+++  + K L
Sbjct: 417 ----KSLAIVLEKSGKIDEAITTYTKIL 440

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,267,957
Number of Sequences: 369166
Number of extensions: 2211352
Number of successful extensions: 6252
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6183
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 11916165000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00106

  1. Dr_sW_003_L14
  2. Dr_sW_017_J21
  3. Dr_sW_017_I22