DrC_00100
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00100 (747 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P59282|P25B_HUMAN Protein p25-beta 66 1e-10 sp|Q9BW30|CG38_HUMAN Protein CGI-38 65 1e-10 sp|Q9CRB6|CG38_MOUSE Protein CGI-38 homolog 63 7e-10 sp|Q7TQD2|P25A_MOUSE Tubulin polymerization-promoting prote... 60 5e-09 sp|Q27957|P25A_BOVIN Tubulin polymerization-promoting prote... 58 3e-08 sp|O94811|P25A_HUMAN Tubulin polymerization-promoting prote... 56 9e-08 sp|P91127|YBYK_CAEEL Hypothetical protein C32E8.3 in chromo... 53 8e-07 sp|Q9VV43|Y4893_DROME Hypothetical protein CG4893 52 2e-06 sp|P32350|KNS1_YEAST Protein kinase KNS1 32 1.8 sp|O46409|APOA4_PIG Apolipoprotein A-IV precursor (Apo-AIV)... 31 4.0
>sp|P59282|P25B_HUMAN Protein p25-beta Length = 170 Score = 65.9 bits (159), Expect = 1e-10 Identities = 50/149 (33%), Positives = 66/149 (44%), Gaps = 5/149 (3%) Frame = +3 Query: 168 FLEFCESTKKGSTTATDKTIKKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGF 344 F F ES+ G T +K K+C D + KT T+ DVDI F K + + F F Sbjct: 12 FAAFGESSSSG-TEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQF 70 Query: 345 ENFLDKFFIPAYAKSCKKDAAAISDEVKKKIIS----NGPKAHGATKASKDGATERLTDV 512 + + + K+ DEV + I P GATKA+ GA +RLTD Sbjct: 71 KEAVKEL-------GQKRFKGKSPDEVLENIYGLMEGKDPATTGATKATTVGAVDRLTDT 123 Query: 513 KGYTGARKEAFDAETXXXXXXEGREYLVD 599 YTG KE FD E+ GRE + D Sbjct: 124 SKYTGTHKELFD-ESGKGKGIAGREEMTD 151
>sp|Q9BW30|CG38_HUMAN Protein CGI-38 Length = 176 Score = 65.5 bits (158), Expect = 1e-10 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = +3 Query: 219 KTIKKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGFENFLDKFFIPAYAKSCK 395 K K+C D K+ K+ T DVDI F K G + +++ F+ L++ + K Sbjct: 33 KNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELATKRFKGKSK 92 Query: 396 KDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKEAFDAETXXXXXX 575 ++A D + + + P G TKA GA +RLTD YTG+ KE FD E+ Sbjct: 93 EEAF---DAICQLVAGKEPANVGVTKAKTGGAVDRLTDTSRYTGSHKERFD-ESGKGKGI 148 Query: 576 EGREYLVDE 602 GR+ ++D+ Sbjct: 149 AGRQDILDD 157
>sp|Q9CRB6|CG38_MOUSE Protein CGI-38 homolog Length = 176 Score = 63.2 bits (152), Expect = 7e-10 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Frame = +3 Query: 219 KTIKKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGFENFLDKFFIPAYAKSCK 395 K K+C D K+ K T DVDI F K + +++ F+ L++ + K Sbjct: 33 KNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKSK 92 Query: 396 KDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKEAFDAETXXXXXX 575 ++A D + + I P G TKA GA +RLTD YTG+ KE FD E+ Sbjct: 93 EEAF---DAICQLIAGKEPANIGVTKAKTGGAVDRLTDTSKYTGSHKERFD-ESGKGKGI 148 Query: 576 EGREYLVDE 602 GR+ ++D+ Sbjct: 149 AGRQDILDD 157
>sp|Q7TQD2|P25A_MOUSE Tubulin polymerization-promoting protein (TPPP) Length = 218 Score = 60.5 bits (145), Expect = 5e-09 Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Frame = +3 Query: 198 GSTTATDKTI-----KKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGFENFLD 359 G T AT K + K+C D + K T DVDI F K G + + F F+ L+ Sbjct: 61 GDTRATGKEMHGKNWSKLCKDCHVIDGKNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 120 Query: 360 KFFIPAYAKSCKKDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKE 539 + + ++A EV + I P G TKA RLTD +TG+ KE Sbjct: 121 ELAKKRFKDKSSEEAVR---EVHRLIEGRAPVISGVTKAVSSPTVSRLTDTSKFTGSHKE 177 Query: 540 AFDAETXXXXXXEGREYLVDE 602 FD ++ GR LVDE Sbjct: 178 RFD-QSGKGKGKAGRVDLVDE 197
>sp|Q27957|P25A_BOVIN Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) Length = 218 Score = 57.8 bits (138), Expect = 3e-08 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 1/129 (0%) Frame = +3 Query: 219 KTIKKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGFENFLDKFFIPAYAKSCK 395 K K+C D ++ ++ T DVDI F K G + + F F+ L++ A + Sbjct: 73 KNWSKLCRDCQVIDGRSVTVTDVDIVFSKIKGKSCRTITFEQFKEALEEL---AKKRFKD 129 Query: 396 KDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKEAFDAETXXXXXX 575 K A EV K I P G TKA RLTD +TG+ KE FD + Sbjct: 130 KSAEEAVREVHKLIEGKAPIISGVTKAISSPTVSRLTDTSKFTGSHKERFD-PSGRGKGR 188 Query: 576 EGREYLVDE 602 GR LVDE Sbjct: 189 AGRVDLVDE 197
>sp|O94811|P25A_HUMAN Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25) Length = 219 Score = 56.2 bits (134), Expect = 9e-08 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 1/129 (0%) Frame = +3 Query: 219 KTIKKICTDAKLYT-KTFTANDVDIEFRKCIGNQKKDVDFAGFENFLDKFFIPAYAKSCK 395 K K+C D ++ + T DVDI F K G + + F F+ L++ + Sbjct: 74 KNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKRFKDKSS 133 Query: 396 KDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKEAFDAETXXXXXX 575 ++A EV + I P G TKA RLTD +TG+ KE FD + Sbjct: 134 EEAVR---EVHRLIEGKAPIISGVTKAISSPTVSRLTDTTKFTGSHKERFD-PSGKGKGK 189 Query: 576 EGREYLVDE 602 GR LVDE Sbjct: 190 AGRVDLVDE 198
>sp|P91127|YBYK_CAEEL Hypothetical protein C32E8.3 in chromosome I Length = 180 Score = 53.1 bits (126), Expect = 8e-07 Identities = 48/127 (37%), Positives = 57/127 (44%), Gaps = 5/127 (3%) Frame = +3 Query: 189 TKKGSTTATDKTIK---KICTDAK-LYTKTFTANDVDIEFRKCIGNQKKDVDFAGFENFL 356 TK G+ TAT+ T K K DA L K T I F K G +KK F + L Sbjct: 22 TKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKK-ATFDETKKVL 80 Query: 357 DKFFIPAYAKSCKKDAAAISDEVKKKIIS-NGPKAHGATKASKDGATERLTDVKGYTGAR 533 F A+ KK D + +K+ P GA KA+ G RLTD YTGA Sbjct: 81 -AFVAEDRARQSKKPIQDELDAITEKLAKLEAPSVGGAAKANAAGVYSRLTDHTKYTGAH 139 Query: 534 KEAFDAE 554 KE FDAE Sbjct: 140 KERFDAE 146
>sp|Q9VV43|Y4893_DROME Hypothetical protein CG4893 Length = 192 Score = 52.0 bits (123), Expect = 2e-06 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%) Frame = +3 Query: 141 IKMSDMKTVFLEFCESTKKG---STTATDKTIKKICTDAKLYTKTFTANDVDIEFRKCIG 311 + SD F +F +S G + + +DK +K+ AK+ K T D I F+K Sbjct: 35 VSFSDQFKAFSKFGDSKSDGKLITLSQSDKWMKQ----AKVIDKKITTTDTGIHFKKF-- 88 Query: 312 NQKKDVDFAGFENFLDKFFIPAYAKSCKKDAAAISDEVKKKIISNGPKAHGATKASKDGA 491 + + + + FLD AK+ K + + E+K+K+ S G + A K A Sbjct: 89 -KAMKISLSDYNKFLDDL-----AKTKKVELS----EIKQKLASCGAPGVVSVSAGKAAA 138 Query: 492 T-ERLTDVKGYTGARKEAFDAETXXXXXXEGREYLVD 599 +RLTD YTG+ KE FDA + GR +VD Sbjct: 139 AVDRLTDTSKYTGSHKERFDA-SGKGKGIAGRRNVVD 174
>sp|P32350|KNS1_YEAST Protein kinase KNS1 Length = 737 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +3 Query: 129 NHNNIKMSDMKTVFLEFCESTKKGSTTATDKTIKKI 236 N IK D KT+ L++ E K+G T T+K++K++ Sbjct: 588 NSTVIKHFDRKTLSLQWPEKNKRGDTITTEKSMKRV 623
>sp|O46409|APOA4_PIG Apolipoprotein A-IV precursor (Apo-AIV) (ApoA-IV) Length = 382 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/61 (22%), Positives = 31/61 (50%) Frame = +3 Query: 363 FFIPAYAKSCKKDAAAISDEVKKKIISNGPKAHGATKASKDGATERLTDVKGYTGARKEA 542 F + A+ K +A +DE+++K++ HG K + +G + L +++ + + E Sbjct: 243 FQMKKQAEELKAKISANADELRQKLVPVAENVHGHLKGNTEGLQKSLLELRSHLDQQVEE 302 Query: 543 F 545 F Sbjct: 303 F 303
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,096,354
Number of Sequences: 369166
Number of extensions: 1260005
Number of successful extensions: 3692
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3691
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6776504000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
