Planaria EST Database

DrC_00070

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00070
         (924 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q26636|CATL_SARPE  Cathepsin L precursor [Contains: Cathe...   325   1e-88
sp|Q95029|CATL_DROME  Cathepsin L precursor (Cysteine protei...   323   3e-88
sp|Q9GL24|CATL_CANFA  Cathepsin L precursor [Contains: Cathe...   318   2e-86
sp|P06797|CATL_MOUSE  Cathepsin L precursor (Major excreted ...   316   7e-86
sp|P07154|CATL_RAT  Cathepsin L precursor (Major excreted pr...   316   7e-86
sp|P25975|CATL_BOVIN  Cathepsin L precursor [Contains: Cathe...   315   1e-85
sp|P07711|CATL_HUMAN  Cathepsin L precursor (Major excreted ...   315   1e-85
sp|P25782|CYSP2_HOMAM  Digestive cysteine proteinase 2 precu...   313   3e-85
sp|Q28944|CATL_PIG  Cathepsin L precursor [Contains: Catheps...   313   4e-85
sp|O60911|CATL2_HUMAN  Cathepsin L2 precursor (Cathepsin V) ...   310   3e-84

>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 339

 Score =  325 bits (833), Expect = 1e-88
 Identities = 158/287 (55%), Positives = 202/287 (70%), Gaps = 9/287 (3%)
 Frame = +1

Query: 7   RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNA-------TGST 165
           RH+  I +HN  +  GK SY LGLNK+AD+ H EF          LR          G+T
Sbjct: 56  RHK--IAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT 113

Query: 166 FIAPENIKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQ 345
           +I P ++ ++PKSVDWR  G VT VKDQ  CGSCWAFS+TG+LEGQH RK GVL+S SEQ
Sbjct: 114 YIPPAHV-TVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQ 172

Query: 346 QLVDCSQSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTG 522
            LVDCS  +GN GC GGLMD AF YIK   GI++E SYPY   +  C +NKA + A  TG
Sbjct: 173 NLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTG 232

Query: 523 FIDIPQNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGY 702
           F+DIP+ +E  +  +VAT+GP+S+ IDAS  SFQ Y  G+Y+EP+C   +LDHGVL VGY
Sbjct: 233 FVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGY 292

Query: 703 GT-TNGRNFWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           GT  +G ++W+VKNSWGT+WG  GYI+M++++NNQCG+ATA+SYP V
Sbjct: 293 GTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339

>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
           L heavy chain; Cathepsin L light chain]
          Length = 341

 Score =  323 bits (829), Expect = 3e-88
 Identities = 159/283 (56%), Positives = 200/283 (70%), Gaps = 10/283 (3%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNAT--------GSTFIAP 177
           I +HN  +  GK S+ L +NK+ADL H EF          L            G TFI+P
Sbjct: 60  IAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISP 119

Query: 178 ENIKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVD 357
            ++ +LPKSVDWRT+G VT VKDQ  CGSCWAFS+TG+LEGQH RK+GVL+S SEQ LVD
Sbjct: 120 AHV-TLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVD 178

Query: 358 CSQSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDI 534
           CS  +GN GC GGLMD AF YIK   GI++E SYPY A +  C +NK  V A   GF DI
Sbjct: 179 CSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDI 238

Query: 535 PQNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYGT-T 711
           PQ +E  +A +VATVGP+S+ IDAS  SFQFY  G+Y+EPQC + +LDHGVL VG+GT  
Sbjct: 239 PQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDE 298

Query: 712 NGRNFWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           +G ++W+VKNSWGT+WG  G+I+M ++K NQCG+A+A+SYPLV
Sbjct: 299 SGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341

>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 333

 Score =  318 bits (814), Expect = 2e-86
 Identities = 158/278 (56%), Positives = 191/278 (68%), Gaps = 5/278 (1%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
           I+ HN EY  GKH + + +N F D+T+EEF  R + N    +               +PK
Sbjct: 59  IELHNREYSQGKHGFTMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKMFQEPLFAEIPK 116

Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
           SVDWR +GYVTPVK+Q  CGSCWAFS TG+LEGQ  RKTG L+S SEQ LVDCS++ GNE
Sbjct: 117 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNE 176

Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGE-CSYNKAKVVANCTGFIDIPQNNENL 555
           GC GGLMD AF Y+K   G++SE SYPY   + E C+Y      AN TGF+D+PQ  + L
Sbjct: 177 GCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKAL 236

Query: 556 LAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGY---GTTNGRNF 726
           + A VAT+GPIS+ IDA   SFQFYKSGIY +P CSS  LDHGVL VGY   GT +   F
Sbjct: 237 MKA-VATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKF 295

Query: 727 WIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           WIVKNSWG  WG NGY++M+KD+NN CG+ATAASYP V
Sbjct: 296 WIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333

>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
           proteinase) [Contains: Cathepsin L heavy chain;
           Cathepsin L light chain]
          Length = 334

 Score =  316 bits (809), Expect = 7e-86
 Identities = 158/278 (56%), Positives = 198/278 (71%), Gaps = 5/278 (1%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
           IQ HN EY  G+H +++ +N F D+T+EEF  + +      ++  G  F  P  +K +PK
Sbjct: 59  IQLHNGEYSNGQHGFSMEMNAFGDMTNEEFR-QVVNGYRHQKHKKGRLFQEPLMLK-IPK 116

Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
           SVDWR +G VTPVK+Q  CGSCWAFS +G LEGQ   KTG LIS SEQ LVDCS + GN+
Sbjct: 117 SVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQ 176

Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
           GC GGLMD+AF YIK+  G++SE SYPY A +G C Y     VAN TGF+DIPQ  + L+
Sbjct: 177 GCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALM 236

Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
            A VATVGPIS+ +DAS  S QFY SGIY EP CSS +LDHGVL VGYG     +N   +
Sbjct: 237 KA-VATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKY 295

Query: 727 WIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           W+VKNSWG+ WGM GYI+++KD++N CG+ATAASYP+V
Sbjct: 296 WLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333

>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
           protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
           Cathepsin L light chain]
          Length = 334

 Score =  316 bits (809), Expect = 7e-86
 Identities = 158/278 (56%), Positives = 195/278 (70%), Gaps = 5/278 (1%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
           IQ HN EY  GKH + + +N F D+T+EEF  + +      ++  G  F  P  ++ +PK
Sbjct: 59  IQLHNGEYSNGKHGFTMEMNAFGDMTNEEFR-QIVNGYRHQKHKKGRLFQEPLMLQ-IPK 116

Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
           +VDWR +G VTPVK+Q  CGSCWAFS +G LEGQ   KTG LIS SEQ LVDCS   GN+
Sbjct: 117 TVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQ 176

Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
           GC GGLMD+AF YIK+  G++SE SYPY A +G C Y     VAN TGF+DIPQ  + L+
Sbjct: 177 GCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKALM 236

Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
            A VATVGPIS+ +DAS  S QFY SGIY EP CSS  LDHGVL VGYG     +N   +
Sbjct: 237 KA-VATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKY 295

Query: 727 WIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           W+VKNSWG  WGM+GYI+++KD+NN CG+ATAASYP+V
Sbjct: 296 WLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333

>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 334

 Score =  315 bits (807), Expect = 1e-85
 Identities = 161/285 (56%), Positives = 197/285 (69%), Gaps = 7/285 (2%)
 Frame = +1

Query: 7   RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLI-LRNATGSTFIAPEN 183
           +++  I  HN EY  GKH++ + +N F D+T+EEF  R + N     ++  G  F  P  
Sbjct: 54  KNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKLFHEPLL 111

Query: 184 IKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCS 363
           +  +PKSVDW  +GYVTPVK+Q  CGSCWAFS TG+LEGQ  RKTG L+S SEQ LVDCS
Sbjct: 112 V-DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS 170

Query: 364 QSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANE-GECSYNKAKVVANCTGFIDIP 537
           ++ GN+GC GGLMD AF YIK   G++SE SYPY A +   C+Y      AN TGF+DIP
Sbjct: 171 RAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP 230

Query: 538 QNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG---- 705
           Q  + L+ A VATVGPIS+ IDA   SFQFYKSGIY +P CS   LDHGVL VGYG    
Sbjct: 231 QREKALMKA-VATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGT 289

Query: 706 TTNGRNFWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
            +N   FWIVKNSWG  WG NGY++M+KD+NN CG+ATAASYP V
Sbjct: 290 DSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334

>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
           Cathepsin L heavy chain; Cathepsin L light chain]
          Length = 333

 Score =  315 bits (806), Expect = 1e-85
 Identities = 157/278 (56%), Positives = 187/278 (67%), Gaps = 5/278 (1%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
           I+ HN EY  GKHS+ + +N F D+T EEF  R + N    R                P+
Sbjct: 59  IELHNQEYREGKHSFTMAMNAFGDMTSEEF--RQVMNGFQNRKPRKGKVFQEPLFYEAPR 116

Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
           SVDWR +GYVTPVK+Q  CGSCWAFS TG+LEGQ  RKTG LIS SEQ LVDCS   GNE
Sbjct: 117 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 176

Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
           GC GGLMDYAF Y++   G++SE SYPY A E  C YN    VAN TGF+DIP+  + L+
Sbjct: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALM 236

Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
            A VATVGPIS+ IDA   SF FYK GIY EP CSS  +DHGVL VGYG     ++   +
Sbjct: 237 KA-VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKY 295

Query: 727 WIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           W+VKNSWG  WGM GY++M+KD+ N CG+A+AASYP V
Sbjct: 296 WLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333

>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
          Length = 323

 Score =  313 bits (803), Expect = 3e-85
 Identities = 150/279 (53%), Positives = 199/279 (71%), Gaps = 1/279 (0%)
 Frame = +1

Query: 7   RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENI 186
           +++ YI++ N +Y+ G+ ++NL +NKF D+T EEF++  +   +  R+A  S F   +  
Sbjct: 46  QNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNA-VMKGNIPRRSAPVSVFYPKKET 104

Query: 187 KSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQ 366
                 VDWRT+G VTPVKDQ  CGSCWAFSTTGSLEGQH  KTG LIS +EQQLVDCS+
Sbjct: 105 GPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSR 164

Query: 367 SFGNEGCGGGLMDYAFAYIK-QYGIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQN 543
            +G +GC GG M+ AF YIK   GI++EA+YPY A +G C ++   V A C+G  +I   
Sbjct: 165 PYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASG 224

Query: 544 NENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYGTTNGRN 723
           +E  L  +V  +GPIS+ IDA+ +SFQFY SG+Y EP CS + LDH VLAVGYG+  G++
Sbjct: 225 SETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQD 284

Query: 724 FWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           FW+VKNSW TSWG  GYI+MS+++NN CG+AT ASYPLV
Sbjct: 285 FWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323

>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 334

 Score =  313 bits (802), Expect = 4e-85
 Identities = 156/279 (55%), Positives = 191/279 (68%), Gaps = 6/279 (2%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
           I+ HN EY  GKH +++ +N F D+T+EEF  R + N    +            +  +PK
Sbjct: 59  IELHNQEYSQGKHGFSMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKVFHESLVLEVPK 116

Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
           SVDWR +GYVT VK+Q  CGSCWAFS TG+LEGQ  RKTG L+S SEQ LVDCS+  GN+
Sbjct: 117 SVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQ 176

Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANE-GECSYNKAKVVANCTGFIDIPQNNENL 555
           GC GGLMD AF Y+K   G+++E SYPY   E   C+Y      AN TGF+DIPQ  + L
Sbjct: 177 GCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKAL 236

Query: 556 LAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRN 723
           + A VATVGPIS+ IDA  +SFQFYKSGIY +P CSS  LDHGVL VGYG     +N   
Sbjct: 237 MKA-VATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSK 295

Query: 724 FWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
           FWIVKNSWG  WG NGY++M+KD+NN CG++TAASYP V
Sbjct: 296 FWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334

>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
          Length = 334

 Score =  310 bits (795), Expect = 3e-84
 Identities = 155/280 (55%), Positives = 190/280 (67%), Gaps = 7/280 (2%)
 Frame = +1

Query: 22  IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRF--IPNKLILRNATGSTFIAPENIKSL 195
           I+ HN EY  GKH + + +N F D+T+EEF        N+   +   G  F  P  +  L
Sbjct: 59  IELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRK---GKVFREPLFL-DL 114

Query: 196 PKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFG 375
           PKSVDWR +GYVTPVK+Q+ CGSCWAFS TG+LEGQ  RKTG L+S SEQ LVDCS+  G
Sbjct: 115 PKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQG 174

Query: 376 NEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNEN 552
           N+GC GG M  AF Y+K+  G++SE SYPY A +  C Y     VAN TGF  +    E 
Sbjct: 175 NQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEK 234

Query: 553 LLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGR 720
            L  +VATVGPIS+ +DA  +SFQFYKSGIY EP CSS +LDHGVL VGYG     +N  
Sbjct: 235 ALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNS 294

Query: 721 NFWIVKNSWGTSWGMNGYIEMSKDKNNQCGVATAASYPLV 840
            +W+VKNSWG  WG NGY++++KDKNN CG+ATAASYP V
Sbjct: 295 KYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,668,200
Number of Sequences: 369166
Number of extensions: 2294099
Number of successful extensions: 6568
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5934
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9462723610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00070

  1. Dr_sW_002_N07
  2. Dr_sW_021_G08
  3. Dr_sW_006_K19