Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_N07
(787 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 296 3e-80
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 296 4e-80
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 287 2e-77
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 287 3e-77
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 286 3e-77
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 285 1e-76
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 284 2e-76
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 284 2e-76
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 283 3e-76
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 279 7e-75
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 296 bits (759), Expect = 3e-80
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 9/269 (3%)
Frame = +1
Query: 7 RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNA-------TGST 165
RH+ I +HN + GK SY LGLNK+AD+ H EF LR G+T
Sbjct: 56 RHK--IAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT 113
Query: 166 FIAPENIKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQ 345
+I P ++ ++PKSVDWR G VT VKDQ CGSCWAFS+TG+LEGQH RK GVL+S SEQ
Sbjct: 114 YIPPAHV-TVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQ 172
Query: 346 QLVDCSQSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTG 522
LVDCS +GN GC GGLMD AF YIK GI++E SYPY + C +NKA + A TG
Sbjct: 173 NLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTG 232
Query: 523 FIDIPQNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGY 702
F+DIP+ +E + +VAT+GP+S+ IDAS SFQ Y G+Y+EP+C +LDHGVL VGY
Sbjct: 233 FVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGY 292
Query: 703 GT-TNGRNFWIVKNSWGTSWGMNGYIEMS 786
GT +G ++W+VKNSWGT+WG GYI+M+
Sbjct: 293 GTDESGMDYWLVKNSWGTTWGEQGYIKMA 321
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 296 bits (758), Expect = 4e-80
Identities = 147/264 (55%), Positives = 183/264 (69%), Gaps = 10/264 (3%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNAT--------GSTFIAP 177
I +HN + GK S+ L +NK+ADL H EF L G TFI+P
Sbjct: 60 IAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISP 119
Query: 178 ENIKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVD 357
++ +LPKSVDWRT+G VT VKDQ CGSCWAFS+TG+LEGQH RK+GVL+S SEQ LVD
Sbjct: 120 AHV-TLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVD 178
Query: 358 CSQSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDI 534
CS +GN GC GGLMD AF YIK GI++E SYPY A + C +NK V A GF DI
Sbjct: 179 CSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDI 238
Query: 535 PQNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYGT-T 711
PQ +E +A +VATVGP+S+ IDAS SFQFY G+Y+EPQC + +LDHGVL VG+GT
Sbjct: 239 PQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDE 298
Query: 712 NGRNFWIVKNSWGTSWGMNGYIEM 783
+G ++W+VKNSWGT+WG G+I+M
Sbjct: 299 SGEDYWLVKNSWGTTWGDKGFIKM 322
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 287 bits (735), Expect = 2e-77
Identities = 145/260 (55%), Positives = 172/260 (66%), Gaps = 5/260 (1%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
I+ HN EY GKHS+ + +N F D+T EEF R + N R P+
Sbjct: 59 IELHNQEYREGKHSFTMAMNAFGDMTSEEF--RQVMNGFQNRKPRKGKVFQEPLFYEAPR 116
Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
SVDWR +GYVTPVK+Q CGSCWAFS TG+LEGQ RKTG LIS SEQ LVDCS GNE
Sbjct: 117 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 176
Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
GC GGLMDYAF Y++ G++SE SYPY A E C YN VAN TGF+DIP+ + L+
Sbjct: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALM 236
Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
A VATVGPIS+ IDA SF FYK GIY EP CSS +DHGVL VGYG ++ +
Sbjct: 237 KA-VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKY 295
Query: 727 WIVKNSWGTSWGMNGYIEMS 786
W+VKNSWG WGM GY++M+
Sbjct: 296 WLVKNSWGEEWGMGGYVKMA 315
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 287 bits (734), Expect = 3e-77
Identities = 144/260 (55%), Positives = 175/260 (67%), Gaps = 5/260 (1%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
I+ HN EY GKH + + +N F D+T+EEF R + N + +PK
Sbjct: 59 IELHNREYSQGKHGFTMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKMFQEPLFAEIPK 116
Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
SVDWR +GYVTPVK+Q CGSCWAFS TG+LEGQ RKTG L+S SEQ LVDCS++ GNE
Sbjct: 117 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNE 176
Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGE-CSYNKAKVVANCTGFIDIPQNNENL 555
GC GGLMD AF Y+K G++SE SYPY + E C+Y AN TGF+D+PQ + L
Sbjct: 177 GCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKAL 236
Query: 556 LAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGY---GTTNGRNF 726
+ A VAT+GPIS+ IDA SFQFYKSGIY +P CSS LDHGVL VGY GT + F
Sbjct: 237 MKA-VATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKF 295
Query: 727 WIVKNSWGTSWGMNGYIEMS 786
WIVKNSWG WG NGY++M+
Sbjct: 296 WIVKNSWGPEWGWNGYVKMA 315
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 286 bits (733), Expect = 3e-77
Identities = 145/260 (55%), Positives = 181/260 (69%), Gaps = 5/260 (1%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
IQ HN EY G+H +++ +N F D+T+EEF + + ++ G F P +K +PK
Sbjct: 59 IQLHNGEYSNGQHGFSMEMNAFGDMTNEEFR-QVVNGYRHQKHKKGRLFQEPLMLK-IPK 116
Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
SVDWR +G VTPVK+Q CGSCWAFS +G LEGQ KTG LIS SEQ LVDCS + GN+
Sbjct: 117 SVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQ 176
Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
GC GGLMD+AF YIK+ G++SE SYPY A +G C Y VAN TGF+DIPQ + L+
Sbjct: 177 GCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALM 236
Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
A VATVGPIS+ +DAS S QFY SGIY EP CSS +LDHGVL VGYG +N +
Sbjct: 237 KA-VATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKY 295
Query: 727 WIVKNSWGTSWGMNGYIEMS 786
W+VKNSWG+ WGM GYI+++
Sbjct: 296 WLVKNSWGSEWGMEGYIKIA 315
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 285 bits (729), Expect = 1e-76
Identities = 138/261 (52%), Positives = 183/261 (70%), Gaps = 1/261 (0%)
Frame = +1
Query: 7 RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENI 186
+++ YI++ N +Y+ G+ ++NL +NKF D+T EEF++ + + R+A S F +
Sbjct: 46 QNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNA-VMKGNIPRRSAPVSVFYPKKET 104
Query: 187 KSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQ 366
VDWRT+G VTPVKDQ CGSCWAFSTTGSLEGQH KTG LIS +EQQLVDCS+
Sbjct: 105 GPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSR 164
Query: 367 SFGNEGCGGGLMDYAFAYIK-QYGIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQN 543
+G +GC GG M+ AF YIK GI++EA+YPY A +G C ++ V A C+G +I
Sbjct: 165 PYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASG 224
Query: 544 NENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYGTTNGRN 723
+E L +V +GPIS+ IDA+ +SFQFY SG+Y EP CS + LDH VLAVGYG+ G++
Sbjct: 225 SETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQD 284
Query: 724 FWIVKNSWGTSWGMNGYIEMS 786
FW+VKNSW TSWG GYI+MS
Sbjct: 285 FWLVKNSWATSWGDAGYIKMS 305
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 284 bits (727), Expect = 2e-76
Identities = 147/267 (55%), Positives = 181/267 (67%), Gaps = 7/267 (2%)
Frame = +1
Query: 7 RHEGYIQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLI-LRNATGSTFIAPEN 183
+++ I HN EY GKH++ + +N F D+T+EEF R + N ++ G F P
Sbjct: 54 KNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKLFHEPLL 111
Query: 184 IKSLPKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCS 363
+ +PKSVDW +GYVTPVK+Q CGSCWAFS TG+LEGQ RKTG L+S SEQ LVDCS
Sbjct: 112 V-DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS 170
Query: 364 QSFGNEGCGGGLMDYAFAYIKQY-GIESEASYPYTANE-GECSYNKAKVVANCTGFIDIP 537
++ GN+GC GGLMD AF YIK G++SE SYPY A + C+Y AN TGF+DIP
Sbjct: 171 RAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP 230
Query: 538 QNNENLLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG---- 705
Q + L+ A VATVGPIS+ IDA SFQFYKSGIY +P CS LDHGVL VGYG
Sbjct: 231 QREKALMKA-VATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGT 289
Query: 706 TTNGRNFWIVKNSWGTSWGMNGYIEMS 786
+N FWIVKNSWG WG NGY++M+
Sbjct: 290 DSNNNKFWIVKNSWGPEWGWNGYVKMA 316
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 284 bits (727), Expect = 2e-76
Identities = 144/260 (55%), Positives = 178/260 (68%), Gaps = 5/260 (1%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
IQ HN EY GKH + + +N F D+T+EEF + + ++ G F P ++ +PK
Sbjct: 59 IQLHNGEYSNGKHGFTMEMNAFGDMTNEEFR-QIVNGYRHQKHKKGRLFQEPLMLQ-IPK 116
Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
+VDWR +G VTPVK+Q CGSCWAFS +G LEGQ KTG LIS SEQ LVDCS GN+
Sbjct: 117 TVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQ 176
Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNENLL 558
GC GGLMD+AF YIK+ G++SE SYPY A +G C Y VAN TGF+DIPQ + L+
Sbjct: 177 GCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKALM 236
Query: 559 AASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRNF 726
A VATVGPIS+ +DAS S QFY SGIY EP CSS LDHGVL VGYG +N +
Sbjct: 237 KA-VATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKY 295
Query: 727 WIVKNSWGTSWGMNGYIEMS 786
W+VKNSWG WGM+GYI+++
Sbjct: 296 WLVKNSWGKEWGMDGYIKIA 315
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 283 bits (725), Expect = 3e-76
Identities = 143/261 (54%), Positives = 175/261 (67%), Gaps = 6/261 (2%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRFIPNKLILRNATGSTFIAPENIKSLPK 201
I+ HN EY GKH +++ +N F D+T+EEF R + N + + +PK
Sbjct: 59 IELHNQEYSQGKHGFSMAMNAFGDMTNEEF--RQVMNGFQNQKHKKGKVFHESLVLEVPK 116
Query: 202 SVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFGNE 381
SVDWR +GYVT VK+Q CGSCWAFS TG+LEGQ RKTG L+S SEQ LVDCS+ GN+
Sbjct: 117 SVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQ 176
Query: 382 GCGGGLMDYAFAYIKQY-GIESEASYPYTANE-GECSYNKAKVVANCTGFIDIPQNNENL 555
GC GGLMD AF Y+K G+++E SYPY E C+Y AN TGF+DIPQ + L
Sbjct: 177 GCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKAL 236
Query: 556 LAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGRN 723
+ A VATVGPIS+ IDA +SFQFYKSGIY +P CSS LDHGVL VGYG +N
Sbjct: 237 MKA-VATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSK 295
Query: 724 FWIVKNSWGTSWGMNGYIEMS 786
FWIVKNSWG WG NGY++M+
Sbjct: 296 FWIVKNSWGPEWGWNGYVKMA 316
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 279 bits (713), Expect = 7e-75
Identities = 140/262 (53%), Positives = 174/262 (66%), Gaps = 7/262 (2%)
Frame = +1
Query: 22 IQQHNLEYDLGKHSYNLGLNKFADLTHEEFSSRF--IPNKLILRNATGSTFIAPENIKSL 195
I+ HN EY GKH + + +N F D+T+EEF N+ + G F P + L
Sbjct: 59 IELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRK---GKVFREPLFL-DL 114
Query: 196 PKSVDWRTQGYVTPVKDQQSCGSCWAFSTTGSLEGQHKRKTGVLISFSEQQLVDCSQSFG 375
PKSVDWR +GYVTPVK+Q+ CGSCWAFS TG+LEGQ RKTG L+S SEQ LVDCS+ G
Sbjct: 115 PKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQG 174
Query: 376 NEGCGGGLMDYAFAYIKQY-GIESEASYPYTANEGECSYNKAKVVANCTGFIDIPQNNEN 552
N+GC GG M AF Y+K+ G++SE SYPY A + C Y VAN TGF + E
Sbjct: 175 NQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEK 234
Query: 553 LLAASVATVGPISIGIDASQASFQFYKSGIYDEPQCSSTSLDHGVLAVGYG----TTNGR 720
L +VATVGPIS+ +DA +SFQFYKSGIY EP CSS +LDHGVL VGYG +N
Sbjct: 235 ALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNS 294
Query: 721 NFWIVKNSWGTSWGMNGYIEMS 786
+W+VKNSWG WG NGY++++
Sbjct: 295 KYWLVKNSWGPEWGSNGYVKIA 316
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,304,385
Number of Sequences: 369166
Number of extensions: 1963361
Number of successful extensions: 5895
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5299
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)