DrC_01145
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01145 (1361 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9ULK4|CRSP3_HUMAN CRSP complex subunit 3 (Cofactor requ... 75 6e-13 sp|Q10669|SUR2_CAEEL Protein sur-2 58 6e-08 sp|P57441|SYN_BUCAI Asparaginyl-tRNA synthetase (Asparagine... 38 0.078 sp|Q8FNF4|HRCA_COREF Heat-inducible transcription repressor... 32 4.3 sp|P58954|GR22F_DROME Putative gustatory receptor 22f 31 7.3 sp|Q8NNB3|HRCA_CORGL Heat-inducible transcription repressor... 31 7.3 sp|Q9PK92|PKND_CHLMU Serine/threonine-protein kinase pknD 31 9.5
>sp|Q9ULK4|CRSP3_HUMAN CRSP complex subunit 3 (Cofactor required for Sp1 transcriptional activation subunit 3) (Transcriptional coactivator CRSP130) (Vitamin D3 receptor-interacting protein complex 130 kDa component) (DRIP130) (Activator-recruited cofactor 130 kDa component) (ARC130) Length = 1368 Score = 74.7 bits (182), Expect = 6e-13 Identities = 36/124 (29%), Positives = 71/124 (57%), Gaps = 1/124 (0%) Frame = +3 Query: 909 LCLWHSMWSHANMTQITNCVNYVREFIRPFIESEGQFLLTCHMCGPLMYPLQTDKTGKLI 1088 L L H++W H+++ Q++ ++ E + P +++E Q L H+ GP + Q ++T +I Sbjct: 1209 LALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMI 1268 Query: 1089 ELVAELYNCLAQVPK-TIPIVHSDTIADLMYHIKYIYVGHGVLEYVKERMPYFEEELRAK 1265 E+ Y+ L V + + + + D I D +YH+KY++ G V E V++ + + L+ + Sbjct: 1269 EIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLR 1328 Query: 1266 LKFI 1277 L+FI Sbjct: 1329 LRFI 1332
Score = 56.2 bits (134), Expect = 2e-07
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Frame = +2
Query: 56 DNWCQIHFALHEKLPEILVNSGSKNQI---------ILPQYYNHLLLRLIPVFELIISSL 208
++W H H+K PE L G Q+ LP Y+ ++ LR +PVF+++I
Sbjct: 915 NDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRF 974
Query: 209 VHFPQVAIKMSNFFKIASQLFKFHSYPLYFCYSLIRSQIMWGPENRQLLQFIIYHI---L 379
+ V+ + L+KFH P+ + Y+ + M + L + +++ I L
Sbjct: 975 LELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIGSL 1034
Query: 380 QEHQSSGRYFTTTGWRLLTCSVSDIDHDKKTAE---ICRELMSKIHSVFLTFGKIGIPYK 550
++++ G + T L C+++ + + + CR L+ ++ V GK P+
Sbjct: 1035 KDNRPQGWCLSDT---YLKCAMNAREENPWVPDDTYYCR-LIGRL--VDTMAGKSPGPFP 1088
Query: 551 N--WRQDQSSSAQSHVVYAAVIELMLCGSKPQIVVDSIVTV 667
N WR ++ + +H ++ +ELM + V ++++ V
Sbjct: 1089 NCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNV 1129
>sp|Q10669|SUR2_CAEEL Protein sur-2 Length = 1587 Score = 58.2 bits (139), Expect = 6e-08 Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 11/207 (5%) Frame = +2 Query: 86 HEKLPEI----LVNS-GSKNQIILPQYYNHLLLRLIPVFELIISSLVHFPQVAIKMS-NF 247 H+ PE LV S S + + +P YY L+ RL+P+ + + V Q K++ Sbjct: 979 HDAFPEFEACELVRSYDSSSNVHMPTYYGCLIERLLPIMDQYLH--VALEQQGYKLNPQI 1036 Query: 248 FKIASQLFKFHSYPLYFCYSLIRSQ--IMWGPENRQLLQFIIYHILQEHQSSGRYFTTTG 421 + S L+KFH+ P++F YS++ + +M GP+ + + I + H Sbjct: 1037 LQSVSMLYKFHAMPIHFMYSVLFTSHGLMSGPDAKSFVLAFATQIEECH----------- 1085 Query: 422 WRLLTCSVSDIDHDKKTAE-ICRELMSKIHSVFLTFGKIGIPY--KNWRQDQSSSAQSHV 592 LT + +H K + E + EL+ ++ S L F P+ K+W+ + S + Sbjct: 1086 ---LTEAFEKFNHQKSSREQLIMELIDRM-SASLDFILTPPPFVAKDWKIAELSPG-AQT 1140 Query: 593 VYAAVIELMLCGSKPQIVVDSIVTVCQ 673 +Y A IELM P+ +V +++ V Q Sbjct: 1141 LYLACIELMASPHSPETLVAAMINVMQ 1167
>sp|P57441|SYN_BUCAI Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 37.7 bits (86), Expect = 0.078 Identities = 20/66 (30%), Positives = 34/66 (51%) Frame = +2 Query: 632 KPQIVVDSIVTVCQEQRGGSKFQEYINIFGLYDGFIFKGISSICNSSIFKNYY*SGCEMS 811 K I+V+S++TVC R + + +YDG F I I N+++ NYY ++ Sbjct: 11 KDDIIVNSLITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTL-PNYYKEILHLT 69 Query: 812 RICSII 829 CS++ Sbjct: 70 TGCSVM 75
>sp|Q8FNF4|HRCA_COREF Heat-inducible transcription repressor hrcA Length = 342 Score = 32.0 bits (71), Expect = 4.3 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 371 HILQEHQSSGRYFTTTGWRLLTCSVSDI 454 +I+QEH SSGR T G+RL S+ DI Sbjct: 57 YIVQEHASSGRVPTEKGYRLFVDSIHDI 84
>sp|P58954|GR22F_DROME Putative gustatory receptor 22f Length = 378 Score = 31.2 bits (69), Expect = 7.3 Identities = 36/165 (21%), Positives = 77/165 (46%), Gaps = 4/165 (2%) Frame = +3 Query: 735 LFSKEYRQYATHQFSKIIIDPVVKCQEFVRLFF---IDFLQDDWDSSKIHP-DNQIGDLQ 902 L SK+ R+Y + + ++ ++ Q V FF + L + W S+ + N++ L+ Sbjct: 69 LASKQRRKYNAFERNPLLEKIYMQFQ--VTTFFTISVLLLMNVWKSNTVRKIANELLTLE 126 Query: 903 VQLCLWHSMWSHANMTQITNCVNYVREFIRPFIESEGQFLLTCHMCGPLMYPLQTDKTGK 1082 Q+ ++ + NC N+ I+ + + GQF+++ + C Q + K Sbjct: 127 GQV---------KDLLTLKNCPNFNCFVIKKHVAAIGQFVISIYFC-----LCQENSYPK 172 Query: 1083 LIELVAELYNCLAQVPKTIPIVHSDTIADLMYHIKYIYVGHGVLE 1217 +++++ CL V + I+H T L+Y +Y+++ + LE Sbjct: 173 ILKILC----CLPSVGLQLIIMHFHTEIILVY--RYVWLVNETLE 211
>sp|Q8NNB3|HRCA_CORGL Heat-inducible transcription repressor hrcA Length = 341 Score = 31.2 bits (69), Expect = 7.3 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 374 ILQEHQSSGRYFTTTGWRLLTCSVSDI 454 I+QEH SSGR T G+RL S+ DI Sbjct: 57 IVQEHASSGRVPTERGYRLFVDSIHDI 83
>sp|Q9PK92|PKND_CHLMU Serine/threonine-protein kinase pknD Length = 934 Score = 30.8 bits (68), Expect = 9.5 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 21/118 (17%) Frame = +3 Query: 699 KSILIFSGCMMALFSKEYRQ--------------YATHQFS-KIIIDPVVKCQEFVRLFF 833 + +++F + AL ++EYRQ YA FS + ID VK F Sbjct: 735 EELVLFVQGLAALQNREYRQAKEFISAVPFALQLYALDLFSLQAFIDEEVKV-------F 787 Query: 834 IDFLQDDWDSSKIHPDNQIGDLQVQLCLWHSMWSHA------NMTQITNCVNYVREFI 989 DFLQD ++S+ + +Q+ LW+ A N Q + Y F+ Sbjct: 788 SDFLQDIYNSASAEDHKHVLVYMIQVSLWNQDLKQAYELLSKNFPQDKGLIEYSEAFV 845
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,965,032
Number of Sequences: 369166
Number of extensions: 3308881
Number of successful extensions: 7508
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7501
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16033069410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
