Planaria EST Database

DrC_01129

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01129
         (979 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P17980|PRS6A_HUMAN  26S protease regulatory subunit 6A (T...   562   e-160
sp|Q63569|PRS6A_RAT  26S protease regulatory subunit 6A (TAT...   562   e-160
sp|O42586|PR6AB_XENLA  26S protease regulatory subunit 6A-B ...   556   e-158
sp|O88685|PRS6A_MOUSE  26S protease regulatory subunit 6A (T...   555   e-158
sp|P46465|PRS6A_ORYSA  26S protease regulatory subunit 6A ho...   526   e-149
sp|O23894|PRS6A_BRACM  26S protease regulatory subunit 6A ho...   523   e-148
sp|P54776|PRS6A_LYCES  26S protease regulatory subunit 6A ho...   521   e-147
sp|O04019|PRS6A_ARATH  26S protease regulatory subunit 6A ho...   516   e-146
sp|O14126|PRS6A_SCHPO  26S protease regulatory subunit 6A         494   e-139
sp|O42587|PR6AA_XENLA  26S protease regulatory subunit 6A-A ...   493   e-139

>sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1)
            (Proteasome subunit P50)
          Length = 439

 Score =  562 bits (1448), Expect = e-160
 Identities = 278/316 (87%), Positives = 298/316 (94%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            IKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERPTE
Sbjct: 124  IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTE 183

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
            QYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQ
Sbjct: 184  QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            TK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGD
Sbjct: 244  TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 303

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARA
Sbjct: 304  REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HEDYM+ 
Sbjct: 364  RIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEG 423

Query: 902  ILEVQARKKTTLNYYA 949
            ILEVQA+KK  L YYA
Sbjct: 424  ILEVQAKKKANLQYYA 439

>sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1)
            (Spermatogenic cell/sperm-associated TAT-binding protein
            homolog SATA)
          Length = 439

 Score =  562 bits (1448), Expect = e-160
 Identities = 278/316 (87%), Positives = 298/316 (94%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            IKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERPTE
Sbjct: 124  IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTE 183

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
            QYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQ
Sbjct: 184  QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            TK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGD
Sbjct: 244  TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 303

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARA
Sbjct: 304  REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HEDYM+ 
Sbjct: 364  RIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEG 423

Query: 902  ILEVQARKKTTLNYYA 949
            ILEVQA+KK  L YYA
Sbjct: 424  ILEVQAKKKANLQYYA 439

>sp|O42586|PR6AB_XENLA 26S protease regulatory subunit 6A-B (TAT-binding protein 10)
            (TBP-10)
          Length = 404

 Score =  556 bits (1434), Expect = e-158
 Identities = 275/316 (87%), Positives = 296/316 (93%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            IKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERPTE
Sbjct: 89   IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTE 148

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
            QYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQ
Sbjct: 149  QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 208

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            TK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIG KRFDSEKAGD
Sbjct: 209  TKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGD 268

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGFQP   +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARA
Sbjct: 269  REVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 328

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAG+IALRRGA  + HEDYM+ 
Sbjct: 329  RIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEG 388

Query: 902  ILEVQARKKTTLNYYA 949
            ILEVQA+KK  L YYA
Sbjct: 389  ILEVQAKKKANLQYYA 404

>sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1)
          Length = 442

 Score =  555 bits (1430), Expect = e-158
 Identities = 275/316 (87%), Positives = 297/316 (93%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            IKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP ++DSRVKAMEVDERPTE
Sbjct: 127  IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTE 186

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
            QYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQ
Sbjct: 187  QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 246

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            TK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGD
Sbjct: 247  TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 306

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARA
Sbjct: 307  REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 366

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RIMQIHSRKMNV+ DVN+EELARCTDDFNGAQ KAVCVEAGMIALRRGA  + HED+M+ 
Sbjct: 367  RIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEG 426

Query: 902  ILEVQARKKTTLNYYA 949
            ILEVQA+KK  L YYA
Sbjct: 427  ILEVQAKKKANLQYYA 442

>sp|P46465|PRS6A_ORYSA 26S protease regulatory subunit 6A homolog (TAT-binding protein
            homolog 1) (TBP-1)
          Length = 429

 Score =  526 bits (1356), Expect = e-149
 Identities = 259/316 (81%), Positives = 292/316 (92%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            +KTSTRQT FLP+IGLV+P +LKPGDLVGVNKDSYLIL+ LP+E+DSRVKAMEVDE+PTE
Sbjct: 114  LKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTE 173

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
             Y+DIGGL+KQIQEL+EA+VLPMTHKDRF+ +GI+PPKGVLLYGPPGTGKTL+ARACAAQ
Sbjct: 174  DYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQ 233

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            T +TFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEK+P IIFIDE+DAIGTKRFDSE +GD
Sbjct: 234  TNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD 293

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGF  +  IKVIAATNR DILDPAL+RSGRLDRKIEFP P+EEARA
Sbjct: 294  REVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARA 353

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RI+QIHSRKMNV  DVNFEELAR TDDFNGAQ KAVCVEAGM+ALRR A  V HED+ + 
Sbjct: 354  RILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEG 413

Query: 902  ILEVQARKKTTLNYYA 949
            I++VQA+KK++LNYYA
Sbjct: 414  IIQVQAKKKSSLNYYA 429

>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog (TAT-binding protein
            homolog 1) (TBP-1)
          Length = 424

 Score =  523 bits (1348), Expect = e-148
 Identities = 257/316 (81%), Positives = 290/316 (91%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            +KTSTRQT FLP++GLV+P+ LKPGDLVGVNKDSYLIL+ LP+E+DSRVKAMEVDE+PTE
Sbjct: 109  LKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTE 168

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
             Y+DIGGL+KQIQEL+EA+VLPMTHK+RF+ +G++PPKGVLLYGPPGTGKTL+ARACAAQ
Sbjct: 169  DYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQ 228

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            T +TFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEKAP IIFIDE+DAIGTKRFDSE +GD
Sbjct: 229  TNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 288

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGF  +  IKVIAATNR DILDPAL+RSGRLDRKIEFP P EEARA
Sbjct: 289  REVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARA 348

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RI+QIHSRKMNV  DVNFEELAR TDDFNGAQ KAVCVEAGM+ALRR A  V HED+ + 
Sbjct: 349  RILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 408

Query: 902  ILEVQARKKTTLNYYA 949
            I++VQA+KK +LNYYA
Sbjct: 409  IIQVQAKKKASLNYYA 424

>sp|P54776|PRS6A_LYCES 26S protease regulatory subunit 6A homolog (TAT-binding protein
            homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1)
          Length = 423

 Score =  521 bits (1341), Expect = e-147
 Identities = 255/316 (80%), Positives = 289/316 (91%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            +KTSTRQT FLP++GLV+P+ LKPGDLVGVNKDSYLIL+ LP+E+DSRVKAMEVDE+PTE
Sbjct: 108  LKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTE 167

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
             Y DIGGL+KQIQEL+EA+VLPMTH++RF+ +G++PPKGVLLYGPPGTGKTL+ARACAAQ
Sbjct: 168  DYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQ 227

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            T +TFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEK+P IIFIDE+DAIGTKRFDSE +GD
Sbjct: 228  TNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD 287

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGF  +  IKVIAATNR DILDPAL+RSGRLDRKIEFP P EEARA
Sbjct: 288  REVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARA 347

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RI+QIHSRKMNV  DVNFEELAR TDDFNGAQ KAVCVEAGM+ALRR A  V HED+ + 
Sbjct: 348  RILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEG 407

Query: 902  ILEVQARKKTTLNYYA 949
            I++VQA+KK +LNYYA
Sbjct: 408  IIQVQAKKKASLNYYA 423

>sp|O04019|PRS6A_ARATH 26S protease regulatory subunit 6A homolog (TAT-binding protein
            homolog 1) (TBP-1)
          Length = 419

 Score =  516 bits (1329), Expect = e-146
 Identities = 254/316 (80%), Positives = 288/316 (91%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            +KTSTRQT FLP++GLV+P+ LKPGDLVGVNKDSYLIL+ LP+E+DSRVKAMEVDE+PTE
Sbjct: 104  LKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTE 163

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
             Y+DIGGL+KQIQEL+EA+VLPMTHK++F+ +GI+PPKGVLLYGPPGTGKTL+ARACAAQ
Sbjct: 164  DYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQ 223

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            T +TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GD
Sbjct: 224  TNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD 283

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGF  +  IKVIAATNR DILDPAL+RSGRLDRKIEFP P EEAR 
Sbjct: 284  REVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARG 343

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
            RI+QIHSRKMNV  DVNFEELAR TDDFNGAQ KAVCVEAGM+ALRR A  V HED+ + 
Sbjct: 344  RILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 403

Query: 902  ILEVQARKKTTLNYYA 949
            I++VQA+KK +LNYYA
Sbjct: 404  IIQVQAKKKASLNYYA 419

>sp|O14126|PRS6A_SCHPO 26S protease regulatory subunit 6A
          Length = 438

 Score =  494 bits (1271), Expect = e-139
 Identities = 242/316 (76%), Positives = 279/316 (88%)
 Frame = +2

Query: 2    IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
            IKTSTRQT FLP+IGLVEP EL PGDL+GVNKDSYLI++KLP+E+DSRVKAMEVDE+PTE
Sbjct: 123  IKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTE 182

Query: 182  QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
            +YSDIGGL KQI+EL EA+VLPM   D+F+ +G++PPKG L++GPPGTGKTLLARACAAQ
Sbjct: 183  RYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQ 242

Query: 362  TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
            + +TFLKLA PQLVQMFIGDG+KLVRDAF LAKEK+P IIFIDELDAIGTKRFDSEKAGD
Sbjct: 243  SNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGD 302

Query: 542  REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
            REVQRTMLELLNQLDGF  +  +KVIAATNRVD LDPALLRSGRLDRK+EFP PNEEAR 
Sbjct: 303  REVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARV 362

Query: 722  RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDYMDA 901
             I++IHSRKM +  D+N+EELAR TD++NGA  K+VCVEAGMIALR+G  ++ HE +MD 
Sbjct: 363  GILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDG 422

Query: 902  ILEVQARKKTTLNYYA 949
            ILEVQ RK  TL Y+A
Sbjct: 423  ILEVQMRKSKTLQYFA 438

>sp|O42587|PR6AA_XENLA 26S protease regulatory subunit 6A-A (TAT-binding protein 6)
           (TBP-6)
          Length = 405

 Score =  493 bits (1270), Expect = e-139
 Identities = 249/289 (86%), Positives = 266/289 (92%)
 Frame = +2

Query: 2   IKTSTRQTYFLPIIGLVEPNELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPTE 181
           IKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERPTE
Sbjct: 108 IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTE 167

Query: 182 QYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQ 361
           QYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQ
Sbjct: 168 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 227

Query: 362 TKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGD 541
           TK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGD
Sbjct: 228 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 287

Query: 542 REVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARA 721
           REVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARA
Sbjct: 288 REVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 347

Query: 722 RIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA 868
           RIMQIHSRKMNV+ DVN+EELARC         K   VEAGMIALRRGA
Sbjct: 348 RIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRRGA 396

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,233,890
Number of Sequences: 369166
Number of extensions: 2306189
Number of successful extensions: 9885
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9526
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10239770530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01129

  1. Dr_sW_028_H19
  2. Dr_sW_007_D16