DrC_01086
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01086 (613 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q44776|MRAY_BORBU Phospho-N-acetylmuramoyl-pentapeptide-... 32 1.3 sp|Q5UZE6|SYA_HALMA Alanyl-tRNA synthetase (Alanine--tRNA l... 32 1.3 sp|P58851|Y939_METKA Hypothetical UPF0204 protein MK0939 32 1.7 sp|Q6QHT9|CP19A_ANGJA Cytochrome P450 19A1 (Aromatase) (CYP... 32 1.7 sp|Q82GV2|FBIC_STRAW FO synthase (7,8-didemethyl-8-hydroxy-... 32 1.7 sp|P15172|MYOD1_HUMAN Myoblast determination protein 1 (Myo... 30 6.3 sp|P70091|CP19A_ORENI Cytochrome P450 19A1 (Aromatase) (CYP... 30 6.3 sp|Q92087|CP19A_ORYLA Cytochrome P450 19A1 (Aromatase) (CYP... 29 8.3
>sp|Q44776|MRAY_BORBU Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) Length = 351 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -3 Query: 395 GGAHVSILRWPFHFTSGISLGIYEVKFGAF 306 GG HVS++ +PF + I LG++ + FG F Sbjct: 144 GGEHVSVIYFPFIKSFQIDLGLFYIPFGMF 173
>sp|Q5UZE6|SYA_HALMA Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) Length = 927 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 297 RSSKSSKFDFIYSQ*DS*GEMEWPPQNRYMCTSTWTI*TGYKIPNVGWTWL 449 R ++ + F+ + DS GE E NRY T+ + TGY + WTW+ Sbjct: 217 RGAELATLVFMSMEQDSDGEYEMKDGNRYSPMDTYIVDTGYGLER--WTWM 265
>sp|P58851|Y939_METKA Hypothetical UPF0204 protein MK0939 Length = 279 Score = 31.6 bits (70), Expect = 1.7 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = +1 Query: 187 ERRWENYHEHRCLPTLARRD-AIDFQREEDYMAFV-RKRDRPKAPNLTSYIP-NEIPEVK 357 ER +H L L D A + R+ D + F R R K P+LT ++P N PE K Sbjct: 43 ERDGVRFHLTAALGDLIEEDEARELARKFDVIVFASRHESRTKKPSLTVHVPGNPTPEAK 102 Query: 358 WNGHRRIDTC-APPHG 402 + G + ++ C A P G Sbjct: 103 FGG-KPLEVCTADPAG 117
>sp|Q6QHT9|CP19A_ANGJA Cytochrome P450 19A1 (Aromatase) (CYPXIX) (Estrogen synthetase) (P-450AROM) Length = 511 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +2 Query: 113 YQNTIILWANANLYVTKALLGTYLQKDAGKIIMSIDVYLH*QEEMRLIFNEKKITWLL 286 + N I LW Y KAL G LQ+ + S D +L EE+ + + I LL Sbjct: 148 FNNNIELWKKVRTYFAKALTGPGLQRTVAICVASTDSHLDQLEELTDLSGQVDILNLL 205
>sp|Q82GV2|FBIC_STRAW FO synthase (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) Length = 861 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = +1 Query: 241 RDAIDFQREEDYMAFVRKRDRPKAPNLTSYIPNEIPEV-KWNGHRRIDTCAPPHGQFKPG 417 R+ +D +D +A+VR + T +P+ P V W +R+ AP G Sbjct: 144 REWLDAHGYDDTIAYVRAISI-RILEETGLLPHLNPGVMSWTDFQRLKPVAPSMGMMLET 202 Query: 418 TKFPMWDGPGYYGYYHEALDRHSAGEFRTL 507 T +W PG G +H + D+ A R L Sbjct: 203 TATRLWSEPG--GPHHGSPDKEPAVRLRVL 230
>sp|P15172|MYOD1_HUMAN Myoblast determination protein 1 (Myogenic factor 3) (Myf-3) Length = 319 Score = 29.6 bits (65), Expect = 6.3 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Frame = +1 Query: 70 DAYSKYSKQSDKVMIPEYNYP-MGERKSLCYEGAAWYIPSERRWENYHEHRCLPTLARRD 246 DA S S SD +M +Y+ P G R+ CYEGA Y+E P + Sbjct: 197 DASSPRSNCSDGMM--DYSGPPSGARRRNCYEGA-----------YYNEAPSEPRPGKSA 243 Query: 247 AIDFQREEDYMAFVRKR---DRPKAPN-LTSYIPNEIPEVKWNGHRRIDTCAPPHGQ 405 A+ DY++ + +R + P AP L + +P+E P RR + AP G+ Sbjct: 244 AVS---SLDYLSSIVERISTESPAAPALLLADVPSESPP------RRQEAAAPSEGE 291
>sp|P70091|CP19A_ORENI Cytochrome P450 19A1 (Aromatase) (CYPXIX) (Estrogen synthetase) (P-450AROM) Length = 522 Score = 29.6 bits (65), Expect = 6.3 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 113 YQNTIILWANANLYVTKALLGTYLQKDAGKIIMSIDVYL 229 + N + LW Y KAL G LQ+ + SI +L Sbjct: 148 FNNNVTLWKKIRTYFAKALTGPNLQQTVDVCVSSIQAHL 186
>sp|Q92087|CP19A_ORYLA Cytochrome P450 19A1 (Aromatase) (CYPXIX) (Estrogen synthetase) (P-450AROM) Length = 518 Score = 29.3 bits (64), Expect = 8.3 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 113 YQNTIILWANANLYVTKALLGTYLQKDAGKIIMSIDVYL 229 + N + LW Y TKAL G LQ+ + S +L Sbjct: 148 FNNNVALWKKIRTYFTKALTGPNLQQTVEVCVTSTQTHL 186
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,377,023
Number of Sequences: 369166
Number of extensions: 1785341
Number of successful extensions: 4247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4246
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4797864890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
