Planaria EST Database

DrC_01004

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01004
         (327 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q26636|CATL_SARPE  Cathepsin L precursor [Contains: Cathe...   137   1e-32
sp|Q9GL24|CATL_CANFA  Cathepsin L precursor [Contains: Cathe...   135   2e-32
sp|O60911|CATL2_HUMAN  Cathepsin L2 precursor (Cathepsin V) ...   134   8e-32
sp|Q10991|CATL_SHEEP  Cathepsin L [Contains: Cathepsin L hea...   134   8e-32
sp|P25975|CATL_BOVIN  Cathepsin L precursor [Contains: Cathe...   132   2e-31
sp|Q28944|CATL_PIG  Cathepsin L precursor [Contains: Catheps...   131   5e-31
sp|P07711|CATL_HUMAN  Cathepsin L precursor (Major excreted ...   129   2e-30
sp|Q95029|CATL_DROME  Cathepsin L precursor (Cysteine protei...   129   2e-30
sp|P13277|CYSP1_HOMAM  Digestive cysteine proteinase 1 precu...   129   2e-30
sp|P25782|CYSP2_HOMAM  Digestive cysteine proteinase 2 precu...   128   4e-30

>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 339

 Score =  137 bits (344), Expect = 1e-32
 Identities = 62/87 (71%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGT-EDGNNYWLVKNSWGTVW 178
           P+SVAIDAS+ SFQLY  G+YNEP+C    LDHGVLVVGYGT E G +YWLVKNSWGT W
Sbjct: 253 PVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTW 312

Query: 179 GINGYIKMSKDANNQCGIATKASYPLV 259
           G  GYIKM+++ NNQCGIAT +SYP V
Sbjct: 313 GEQGYIKMARNQNNQCGIATASSYPTV 339

>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 333

 Score =  135 bits (341), Expect = 2e-32
 Identities = 63/89 (70%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYG---TEDGNNYWLVKNSWGT 172
           PISVAIDA + SFQ YKSGIY +PDCSS  LDHGVLVVGYG   T+  N +W+VKNSWG 
Sbjct: 245 PISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGP 304

Query: 173 VWGINGYIKMSKDANNQCGIATKASYPLV 259
            WG NGY+KM+KD NN CGIAT ASYP V
Sbjct: 305 EWGWNGYVKMAKDQNNHCGIATAASYPTV 333

>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
          Length = 334

 Score =  134 bits (336), Expect = 8e-32
 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGNN----YWLVKNSWG 169
           PISVA+DA + SFQ YKSGIY EPDCSS  LDHGVLVVGYG E  N+    YWLVKNSWG
Sbjct: 245 PISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWG 304

Query: 170 TVWGINGYIKMSKDANNQCGIATKASYPLV 259
             WG NGY+K++KD NN CGIAT ASYP V
Sbjct: 305 PEWGSNGYVKIAKDKNNHCGIATAASYPNV 334

>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
           chain]
          Length = 217

 Score =  134 bits (336), Expect = 8e-32
 Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGNN-YWLVKNSWGTVW 178
           PISVAIDA + SFQ YKSGIY +PDCSS  LDHGVLVVGYG E  NN +W+VKNSWG  W
Sbjct: 131 PISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEW 190

Query: 179 GINGYIKMSKDANNQCGIATKASYPLV 259
           G  GY+KM+KD NN CGIAT ASYP V
Sbjct: 191 GNKGYVKMAKDQNNHCGIATAASYPTV 217

>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 334

 Score =  132 bits (332), Expect = 2e-31
 Identities = 62/90 (68%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE----DGNNYWLVKNSWG 169
           PISVAIDA + SFQ YKSGIY +PDCS   LDHGVLVVGYG E    + N +W+VKNSWG
Sbjct: 245 PISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWG 304

Query: 170 TVWGINGYIKMSKDANNQCGIATKASYPLV 259
             WG NGY+KM+KD NN CGIAT ASYP V
Sbjct: 305 PEWGWNGYVKMAKDQNNHCGIATAASYPTV 334

>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 334

 Score =  131 bits (329), Expect = 5e-31
 Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE----DGNNYWLVKNSWG 169
           PISVAIDA + SFQ YKSGIY +PDCSS  LDHGVLVVGYG E    + + +W+VKNSWG
Sbjct: 245 PISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWG 304

Query: 170 TVWGINGYIKMSKDANNQCGIATKASYPLV 259
             WG NGY+KM+KD NN CGI+T ASYP V
Sbjct: 305 PEWGWNGYVKMAKDQNNHCGISTAASYPTV 334

>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
           Cathepsin L heavy chain; Cathepsin L light chain]
          Length = 333

 Score =  129 bits (325), Expect = 2e-30
 Identities = 61/90 (67%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE----DGNNYWLVKNSWG 169
           PISVAIDA + SF  YK GIY EPDCSS  +DHGVLVVGYG E    D N YWLVKNSWG
Sbjct: 244 PISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWG 303

Query: 170 TVWGINGYIKMSKDANNQCGIATKASYPLV 259
             WG+ GY+KM+KD  N CGIA+ ASYP V
Sbjct: 304 EEWGMGGYVKMAKDRRNHCGIASAASYPTV 333

>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
           L heavy chain; Cathepsin L light chain]
          Length = 341

 Score =  129 bits (325), Expect = 2e-30
 Identities = 58/87 (66%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGT-EDGNNYWLVKNSWGTVW 178
           P+SVAIDAS+ SFQ Y  G+YNEP C +  LDHGVLVVG+GT E G +YWLVKNSWGT W
Sbjct: 255 PVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTW 314

Query: 179 GINGYIKMSKDANNQCGIATKASYPLV 259
           G  G+IKM ++  NQCGIA+ +SYPLV
Sbjct: 315 GDKGFIKMLRNKENQCGIASASSYPLV 341

>sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precursor
          Length = 322

 Score =  129 bits (324), Expect = 2e-30
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGNNYWLVKNSWGTVWG 181
           PISVAIDAS+ SFQ Y +G+Y EP CSS+QLDH VL VGYG+E G ++WLVKNSW T WG
Sbjct: 237 PISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWG 296

Query: 182 INGYIKMSKDANNQCGIATKASYPLV 259
            +GYIKM+++ NN CGIAT A YP V
Sbjct: 297 ESGYIKMARNRNNNCGIATDACYPTV 322

>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
          Length = 323

 Score =  128 bits (322), Expect = 4e-30
 Identities = 58/86 (67%), Positives = 67/86 (77%)
 Frame = +2

Query: 2   PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGNNYWLVKNSWGTVWG 181
           PISV IDA++ SFQ Y SG+Y EP CS + LDH VL VGYG+E G ++WLVKNSW T WG
Sbjct: 238 PISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWG 297

Query: 182 INGYIKMSKDANNQCGIATKASYPLV 259
             GYIKMS++ NN CGIAT ASYPLV
Sbjct: 298 DAGYIKMSRNRNNNCGIATVASYPLV 323

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,859,743
Number of Sequences: 369166
Number of extensions: 798069
Number of successful extensions: 2336
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 68,354,980
effective HSP length: 77
effective length of database: 54,130,385
effective search space used: 1678041935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01004

  1. Dr_sW_025_G07
  2. Dr_sW_015_L12