Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_L12
(279 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 112 3e-25
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 110 1e-24
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 109 2e-24
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 109 2e-24
sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L hea... 109 2e-24
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 108 5e-24
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 107 7e-24
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 107 9e-24
sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precu... 106 1e-23
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 106 2e-23
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 112 bits (280), Expect = 3e-25
Identities = 49/69 (71%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -2
Query: 272 GIYNEPDCSSTQLDHGVLVVGYGT-EDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGI 96
G+YNEP+C LDHGVLVVGYGT E G +YWLVKNSWGT WG GYIKM+++ NNQCGI
Sbjct: 271 GVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330
Query: 95 ATKASYPLV 69
AT +SYP V
Sbjct: 331 ATASSYPTV 339
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 110 bits (275), Expect = 1e-24
Identities = 52/74 (70%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDGYIKMSKDAN 111
KSGIY EPDCSS LDHGVLVVGYG E + S YWLVKNSWG WG +GY+K++KD N
Sbjct: 261 KSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKN 320
Query: 110 NQCGIATKASYPLV 69
N CGIAT ASYP V
Sbjct: 321 NHCGIATAASYPNV 334
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 109 bits (272), Expect = 2e-24
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYG---TEDGSNYWLVKNSWGTVWGIDGYIKMSKDANN 108
KSGIY +PDCSS LDHGVLVVGYG T+ + +W+VKNSWG WG +GY+KM+KD NN
Sbjct: 261 KSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNN 320
Query: 107 QCGIATKASYPLV 69
CGIAT ASYP V
Sbjct: 321 HCGIATAASYPTV 333
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 109 bits (272), Expect = 2e-24
Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = -2
Query: 275 SGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDGYIKMSKDANN 108
SGIY EP+CSS LDHGVLVVGYG E + YWLVKNSWG WG+DGYIK++KD NN
Sbjct: 261 SGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNN 320
Query: 107 QCGIATKASYPLV 69
CG+AT ASYP+V
Sbjct: 321 HCGLATAASYPIV 333
>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
chain]
Length = 217
Score = 109 bits (272), Expect = 2e-24
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSN-YWLVKNSWGTVWGIDGYIKMSKDANNQC 102
KSGIY +PDCSS LDHGVLVVGYG E +N +W+VKNSWG WG GY+KM+KD NN C
Sbjct: 147 KSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHC 206
Query: 101 GIATKASYPLV 69
GIAT ASYP V
Sbjct: 207 GIATAASYPTV 217
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 108 bits (269), Expect = 5e-24
Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDGYIKMSKDAN 111
KSGIY +PDCSS LDHGVLVVGYG E + S +W+VKNSWG WG +GY+KM+KD N
Sbjct: 261 KSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQN 320
Query: 110 NQCGIATKASYPLV 69
N CGI+T ASYP V
Sbjct: 321 NHCGISTAASYPTV 334
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 107 bits (268), Expect = 7e-24
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 4/74 (5%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDGYIKMSKDAN 111
K GIY EPDCSS +DHGVLVVGYG E D + YWLVKNSWG WG+ GY+KM+KD
Sbjct: 260 KEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR 319
Query: 110 NQCGIATKASYPLV 69
N CGIA+ ASYP V
Sbjct: 320 NHCGIASAASYPTV 333
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 107 bits (267), Expect = 9e-24
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -2
Query: 275 SGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGI 96
SG+Y EP CS + LDH VL VGYG+E G ++WLVKNSW T WG GYIKMS++ NN CGI
Sbjct: 255 SGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGI 314
Query: 95 ATKASYPLV 69
AT ASYPLV
Sbjct: 315 ATVASYPLV 323
>sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precursor
Length = 322
Score = 106 bits (265), Expect = 1e-23
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = -2
Query: 275 SGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGI 96
+G+Y EP CSS+QLDH VL VGYG+E G ++WLVKNSW T WG GYIKM+++ NN CGI
Sbjct: 254 TGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313
Query: 95 ATKASYPLV 69
AT A YP V
Sbjct: 314 ATDACYPTV 322
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 106 bits (264), Expect = 2e-23
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
Frame = -2
Query: 278 KSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDGYIKMSKDAN 111
KSGIY +PDCS LDHGVLVVGYG E + + +W+VKNSWG WG +GY+KM+KD N
Sbjct: 261 KSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQN 320
Query: 110 NQCGIATKASYPLV 69
N CGIAT ASYP V
Sbjct: 321 NHCGIATAASYPTV 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,506,605
Number of Sequences: 369166
Number of extensions: 669128
Number of successful extensions: 2077
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 68,354,980
effective HSP length: 62
effective length of database: 56,901,410
effective search space used: 1707042300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)