Planaria EST Database

DrC_00968

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00968
         (811 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7RAH3|CDPK1_PLAYO  Calcium-dependent protein kinase 1          53   1e-06
sp|Q8ICR0|CDPK2_PLAF7  Calcium-dependent protein kinase 2 (P...    51   3e-06
sp|O15865|CDPK2_PLAFK  Calcium-dependent protein kinase 2 (P...    51   3e-06
sp|P62343|CDPK1_PLAFK  Calcium-dependent protein kinase 1 (P...    51   4e-06
sp|Q11179|YPC2_CAEEL  Putative serine/threonine-protein kina...    46   1e-04
sp|P29618|CDC21_ORYSA  Cell division control protein 2 homol...    45   2e-04
sp|Q9R0A5|NEK3_MOUSE  Serine/threonine-protein kinase Nek3 (...    45   2e-04
sp|Q06850|CDPK1_ARATH  Calcium-dependent protein kinase, iso...    44   4e-04
sp|P24100|CDC2A_ARATH  Cell division control protein 2 homol...    44   5e-04
sp|P23111|CDC2_MAIZE  Cell division control protein 2 homolo...    44   7e-04

>sp|Q7RAH3|CDPK1_PLAYO Calcium-dependent protein kinase 1
          Length = 535

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
 Frame = +3

Query: 432 KKIDQGQYGKIFLCYDEISRSTVAMKKCKL---------EANGKLENF-TGIINEIQVVS 581
           +K+  G YG++ LC ++   S  A+K  K          + N  +E F   I NEI ++ 
Sbjct: 61  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYNDDNKNIEKFHEEIYNEISLLK 120

Query: 582 LLMDHPNIIKIFDFYRDEKYF 644
            L DHPNIIK+FD + D+KYF
Sbjct: 121 SL-DHPNIIKLFDVFEDKKYF 140

>sp|Q8ICR0|CDPK2_PLAF7 Calcium-dependent protein kinase 2 (PfCDPK2)
          Length = 509

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 27/97 (27%), Positives = 55/97 (56%)
 Frame = +3

Query: 366 LLKEHLELCYVLIMSMENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLEN 545
           L +++L LC+   +  +   + +K+ QG YG ++   D+++    A+K+   E   +L+N
Sbjct: 55  LERKNLILCHSGKLE-DKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKE---EKKDRLKN 110

Query: 546 FTGIINEIQVVSLLMDHPNIIKIFDFYRDEKYFCVTM 656
                 EI+++  L DHPNI+K+++ Y ++ Y  + M
Sbjct: 111 INRFFQEIEIMKKL-DHPNIVKLYETYENDNYIYLIM 146

>sp|O15865|CDPK2_PLAFK Calcium-dependent protein kinase 2 (PfCDPK2)
          Length = 513

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 27/97 (27%), Positives = 55/97 (56%)
 Frame = +3

Query: 366 LLKEHLELCYVLIMSMENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLEN 545
           L +++L LC+   +  +   + +K+ QG YG ++   D+++    A+K+   E   +L+N
Sbjct: 55  LERKNLILCHSGKLE-DKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKE---EKKDRLKN 110

Query: 546 FTGIINEIQVVSLLMDHPNIIKIFDFYRDEKYFCVTM 656
                 EI+++  L DHPNI+K+++ Y ++ Y  + M
Sbjct: 111 INRFFQEIEIMKKL-DHPNIVKLYETYENDNYIYLIM 146

>sp|P62343|CDPK1_PLAFK Calcium-dependent protein kinase 1 (PfCPK) (PfCDPK1)
 sp|P62344|CDPK1_PLAF7 Calcium-dependent protein kinase 1
          Length = 524

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
 Frame = +3

Query: 432 KKIDQGQYGKIFLCYDEISRSTVAMK--------KCKLEANGKLENFTGIINEI-QVVSL 584
           +K+  G YG++ LC ++      A+K        K K     K+E    I  EI   +SL
Sbjct: 60  RKLGSGAYGEVLLCREKHGHGEKAIKVIKKSQFDKMKYSITNKIECDDKIHEEIYNEISL 119

Query: 585 L--MDHPNIIKIFDFYRDEKYF 644
           L  +DHPNIIK+FD + D+KYF
Sbjct: 120 LKSLDHPNIIKLFDVFEDKKYF 141

>sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C05D10.2 in chromosome III
          Length = 470

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = +3

Query: 414 ENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLENFTGIINEIQVVSLLMD 593
           E   +QK++ +G YG ++  YD+ SR TVA+KK   +A     +      E+  +     
Sbjct: 11  EKFDLQKRLGKGAYGIVWKAYDKRSRETVALKKI-FDAFRNPTDSQRTFREVMFLQEFGK 69

Query: 594 HPNIIKIFDFYR 629
           HPN+IK+++ +R
Sbjct: 70  HPNVIKLYNIFR 81

>sp|P29618|CDC21_ORYSA Cell division control protein 2 homolog 1
          Length = 294

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = +3

Query: 411 MENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLENFTGIINEIQVVSLL- 587
           ME    ++KI +G YG ++   D+++  T+A+KK +LE   +    T     I+ +SLL 
Sbjct: 1   MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTA----IREISLLK 56

Query: 588 -MDHPNIIKIFDFYRDEK 638
            M H NI+++ D    EK
Sbjct: 57  EMHHGNIVRLHDVIHSEK 74

>sp|Q9R0A5|NEK3_MOUSE Serine/threonine-protein kinase Nek3 (NimA-related protein kinase
           3)
          Length = 511

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 27/82 (32%), Positives = 41/82 (50%)
 Frame = +3

Query: 411 MENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLENFTGIINEIQVVSLLM 590
           M+N TV + I QG +G+  L   E S  T AMK+ +L     L++ T    +  V+   M
Sbjct: 1   MDNYTVLRVIGQGSFGRALLVLQESSNQTFAMKEIRL-----LKSDTQTSRKEAVLLAKM 55

Query: 591 DHPNIIKIFDFYRDEKYFCVTM 656
            HPNI+   + +  E Y  + M
Sbjct: 56  KHPNIVAFKESFEAEGYLYIVM 77

>sp|Q06850|CDPK1_ARATH Calcium-dependent protein kinase, isoform AK1 (CDPK)
          Length = 610

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +3

Query: 414 ENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKL---ENFTGIINEIQVVSL 584
           E  ++ +K+ QGQ+G  FLC ++ +    A   CK  A  KL   E+   +  EIQ++  
Sbjct: 148 EFYSLGRKLGQGQFGTTFLCVEKTTGKEFA---CKSIAKRKLLTDEDVEDVRREIQIMHH 204

Query: 585 LMDHPNIIKIFDFYRD 632
           L  HPN+I I   Y D
Sbjct: 205 LAGHPNVISIKGAYED 220

>sp|P24100|CDC2A_ARATH Cell division control protein 2 homolog A
          Length = 294

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +3

Query: 411 MENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLENFTGIINEIQVVSLL- 587
           M+     +KI +G YG ++   D+++  T+A+KK +LE   +    T     I+ +SLL 
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTA----IREISLLK 56

Query: 588 -MDHPNIIKIFDFYRDEK 638
            M H NI+K+ D    EK
Sbjct: 57  EMQHSNIVKLQDVVHSEK 74

>sp|P23111|CDC2_MAIZE Cell division control protein 2 homolog (p34cdc2)
          Length = 294

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +3

Query: 411 MENVTVQKKIDQGQYGKIFLCYDEISRSTVAMKKCKLEANGKLENFTGIINEIQVVSLL- 587
           ME     +KI +G YG ++   D+ +  T+A+KK +LE   +    T     I+ +SLL 
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTA----IREISLLK 56

Query: 588 -MDHPNIIKIFDFYRDEK 638
            M+H NI+++ D    EK
Sbjct: 57  EMNHGNIVRLHDVVHSEK 74

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,702,002
Number of Sequences: 369166
Number of extensions: 2032599
Number of successful extensions: 5868
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5831
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7715018400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00968

  1. Dr_sW_024_H06
  2. Dr_sW_007_I16