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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00964
         (813 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8CGF7|TCRG1_MOUSE  Transcription elongation regulator 1 ...   130   3e-30
sp|O14776|TCRG1_HUMAN  Transcription elongation regulator 1 ...   130   3e-30
sp|P34600|YO61_CAEEL  Hypothetical protein ZK1098.1 in chrom...    49   1e-05
sp|Q9R1C7|FNBP3_MOUSE  Formin-binding protein 3 (Formin-bind...    46   1e-04
sp|O75400|FNBP3_HUMAN  Formin-binding protein 3 (Huntingtin ...    46   1e-04
sp|P49756|RBM25_HUMAN  Probable RNA-binding protein 25 (RNA-...    46   1e-04
sp|Q8WXA9|SFR12_HUMAN  Splicing factor, arginine/serine-rich...    45   2e-04
sp|Q8SX83|SPEN_DROME  Split ends protein                           44   5e-04
sp|P21127|CD2L1_HUMAN  PITSLRE serine/threonine-protein kina...    43   0.001
sp|P37709|TRHY_RABIT  Trichohyalin                                 43   0.001

>sp|Q8CGF7|TCRG1_MOUSE Transcription elongation regulator 1 (TATA box-binding
            protein-associated factor 2S) (Transcription factor
            CA150) (p144) (Formin-binding protein 28) (FBP 28)
          Length = 1100

 Score =  130 bits (328), Expect = 3e-30
 Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
 Frame = +3

Query: 264  VKQNYMILLKENKIYKIAHWTDAKKKIDSDQRYKAADSSK-REEWFKEFLKKNKTNSREN 440
            +K ++  LL  + +   + W+  K K++SD RYKA DSS  RE+ FK++++K   N   +
Sbjct: 797  IKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNL--D 854

Query: 441  SETKRDRERKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIK 620
            SE +++ ER+ R EAS+RERE+EV+++ S   ++ D+ER+ H + EA Q FK LL+D+++
Sbjct: 855  SEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVR 914

Query: 621  TSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKEHINSL 746
            +SD SW + +R LRKD RW +    LER  ++ +F EHI +L
Sbjct: 915  SSDVSWSDTRRTLRKDHRW-ESGSLLEREEKEKLFNEHIEAL 955

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETK---- 452
            +L E  +   + W     KI  D RY   +  +R++ F +++K      R   + K    
Sbjct: 671  MLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQA 730

Query: 453  RDRERKERQEASIRERE-------KEVKESLSTA---MRDRD-----------KERDYHL 569
            ++  +K  +EA    R        K  K+S   A   M+DR+           K+     
Sbjct: 731  KEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDS 790

Query: 570  KSEAEQL---FKVLLTDLIKTSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKEHIN 740
            K+  E++   F  LL++    S   W +VK  +  D R+  +       +R+ +FK++I 
Sbjct: 791  KTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSS---SMREDLFKQYIE 847

Query: 741  SL 746
             +
Sbjct: 848  KI 849

>sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 (TATA box-binding
            protein-associated factor 2S) (Transcription factor
            CA150)
          Length = 1098

 Score =  130 bits (328), Expect = 3e-30
 Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
 Frame = +3

Query: 264  VKQNYMILLKENKIYKIAHWTDAKKKIDSDQRYKAADSSK-REEWFKEFLKKNKTNSREN 440
            +K ++  LL  + +   + W+  K K++SD RYKA DSS  RE+ FK++++K   N   +
Sbjct: 795  IKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNL--D 852

Query: 441  SETKRDRERKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIK 620
            SE +++ ER+ R EAS+RERE+EV+++ S   ++ D+ER+ H + EA Q FK LL+D+++
Sbjct: 853  SEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVR 912

Query: 621  TSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKEHINSL 746
            +SD SW + +R LRKD RW +    LER  ++ +F EHI +L
Sbjct: 913  SSDVSWSDTRRTLRKDHRW-ESGSLLEREEKEKLFNEHIEAL 953

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETK---- 452
            +L E  +   + W     KI  D RY   +  +R++ F +++K      R   + K    
Sbjct: 669  MLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQA 728

Query: 453  RDRERKERQEASIRERE-------KEVKESLSTA---MRDRD-----------KERDYHL 569
            ++  +K  +EA    R        K  K+S   A   M+DR+           K+     
Sbjct: 729  KEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDS 788

Query: 570  KSEAEQL---FKVLLTDLIKTSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKEHIN 740
            K+  E++   F  LL++    S   W +VK  +  D R+  +       +R+ +FK++I 
Sbjct: 789  KTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSS---SMREDLFKQYIE 845

Query: 741  SL 746
             +
Sbjct: 846  KI 847

>sp|P34600|YO61_CAEEL Hypothetical protein ZK1098.1 in chromosome III
          Length = 724

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
 Frame = +3

Query: 264 VKQNYMILLKENKIYKIAHWTDAKKKIDSDQRYKAADS-SKREEWFKEFLKKNKTNSR-- 434
           ++  +  LLKE+ + K + WT  K KI+ D+ Y A ++  +RE  F  +  KN T+    
Sbjct: 581 LESEFRNLLKEHNVDKDSEWTVIKPKIEKDKAYLAMENDDERETAFNHY--KNGTSGTTA 638

Query: 435 -----ENSETKRDRERKERQ-------EASIREREKEVKESLSTAMRDRDKER 557
                E  + K+D+++K ++       E  IRE+EK+ K+  S   R  D+ER
Sbjct: 639 GSEILEKKKKKKDKKKKNKRSDNNSESEGEIREKEKKKKKKHSKEDRMDDEER 691

>sp|Q9R1C7|FNBP3_MOUSE Formin-binding protein 3 (Formin-binding protein 11) (FBP 11)
          Length = 953

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = +3

Query: 267 KQNYMILLKENKIYKIAHWTDAKKKIDSDQRYKA-ADSSKREEWFKEFLKKNKTNSRENS 443
           KQ +  LLKE ++   A W  A K I +D RY A A  S++++ F  +            
Sbjct: 393 KQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY------------ 440

Query: 444 ETKRDRERKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLF 593
             K   E++E++EA  R + KE KES    + + +K        +AEQ+F
Sbjct: 441 --KVQTEKEEKEEA--RSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMF 486

 Score = 33.1 bits (74), Expect = 0.93
 Identities = 22/77 (28%), Positives = 37/77 (48%)
 Frame = +3

Query: 330  AKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKE 509
            +KKK    + + A++ S   E  + + K     S+++ +  + R  K     S  EREK+
Sbjct: 837  SKKKRQRSESHSASERSSSAESERSYKK-----SKKHKKKSKKRRHKSDSPESDTEREKD 891

Query: 510  VKESLSTAMRDRDKERD 560
             KE      +DRD E+D
Sbjct: 892  KKE------KDRDSEKD 902

>sp|O75400|FNBP3_HUMAN Formin-binding protein 3 (Huntingtin yeast partner A)
           (Huntingtin-interacting protein HYPA/FBP11) (Fas-ligand
           associated factor 1) (NY-REN-6 antigen)
          Length = 957

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = +3

Query: 267 KQNYMILLKENKIYKIAHWTDAKKKIDSDQRYKA-ADSSKREEWFKEFLKKNKTNSRENS 443
           KQ +  LLKE ++   A W  A K I +D RY A A  S++++ F  +            
Sbjct: 397 KQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY------------ 444

Query: 444 ETKRDRERKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLF 593
             K   E++E++EA  R + KE KES    + + +K        +AEQ+F
Sbjct: 445 --KVQTEKEEKEEA--RSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMF 490

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = +3

Query: 333  KKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEV 512
            KK+  S+ R  +  SS  E       +++   S+++ +  + R  K     S  EREK+ 
Sbjct: 843  KKRQRSESRSASEHSSSAES------ERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDK 896

Query: 513  KESLSTAMRDRDKER 557
            KE    + +DR ++R
Sbjct: 897  KEKDRESEKDRTRQR 911

>sp|P49756|RBM25_HUMAN Probable RNA-binding protein 25 (RNA-binding motif protein 25)
           (RNA-binding region containing protein 7) (Protein S164)
          Length = 784

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
 Frame = +3

Query: 309 KIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRER---KERQ 479
           +I+ + D  KK++ +   K     +R+E  KE  ++ +   RE    +R+RER   +ER+
Sbjct: 221 EISKFRDTHKKLEEE---KGKKEKERQEIEKERRERERERERERERRERERERERERERE 277

Query: 480 EASIREREKE---VKESLSTAMRDRDKERD 560
           +   RERE+E    ++      RDRD+ERD
Sbjct: 278 KEKERERERERDRDRDRTKERDRDRDRERD 307

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
 Frame = +3

Query: 327 DAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENS-----ETKRDRER-KERQEAS 488
           D  K+ D D+  +      RE        K+++ SRE S     E +R+RER +ER+   
Sbjct: 293 DRTKERDRDRDRERDRDRDRER--SSDRNKDRSRSREKSRDRERERERERERERERERER 350

Query: 489 IREREKEVKESLSTAMRDRDKERD 560
            RERE+E +E      R++DK+RD
Sbjct: 351 ERERERE-REREREREREKDKKRD 373

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 19/70 (27%), Positives = 38/70 (54%)
 Frame = +3

Query: 378 SKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEVKESLSTAMRDRDKER 557
           SK  +  K+  ++     +E  E +++R  +ER+    RERE+E +E      R+R++E+
Sbjct: 223 SKFRDTHKKLEEEKGKKEKERQEIEKERRERERE----RERERERREREREREREREREK 278

Query: 558 DYHLKSEAEQ 587
           +   + E E+
Sbjct: 279 EKERERERER 288

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 24/104 (23%), Positives = 49/104 (47%)
 Frame = +3

Query: 276 YMILLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKR 455
           Y ++ KE+         + K+ + S +  K  D+ K+ E         +   +E    + 
Sbjct: 197 YPLITKED--INAIEMEEDKRDLISREISKFRDTHKKLE--------EEKGKKEKERQEI 246

Query: 456 DRERKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQ 587
           ++ER+ER+    RERE+  +E      R+R+KE++   + E ++
Sbjct: 247 EKERRERERERERERERREREREREREREREKEKERERERERDR 290

 Score = 33.1 bits (74), Expect = 0.93
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
 Frame = +3

Query: 288 LKENKIYKIAHWTDAKKKIDSDQRYKAADSSKRE-EWFKEFLKKNKTNSRENSETKRDRE 464
           L+E K  K     + +K+    +R +  +  +RE E  +E  ++ +       E +RDR+
Sbjct: 232 LEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRD 291

Query: 465 R---KERQEASIREREKEVKESLST-----AMRDRDKERDYHLKSEAEQ 587
           R   KER     RER+++     S+       R R+K RD   + E E+
Sbjct: 292 RDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERER 340

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
 Frame = +3

Query: 291 KENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLK-KNKTNSRENSETK---RD 458
           +  +I K     + +++ + ++R +  +  +  E  KE  + + +   R+   TK   RD
Sbjct: 242 ERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRD 301

Query: 459 RER-----KERQEASIREREK-EVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIK 620
           R+R     ++R+ +S R +++   +E      R+R++ER+   + E E+  +       +
Sbjct: 302 RDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE 361

Query: 621 TSDDSWKEVKRVLRKDARWSDISDKLERPLRD 716
              +  K+ KR   +D   +    KLER LR+
Sbjct: 362 REREREKDKKRDREEDEEDAYERRKLERKLRE 393

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
 Frame = +3

Query: 333 KKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENS-----ETKRDRER---------- 467
           + K  S  R K+ D  +  E  +E  ++ +   RE       E +R+RER          
Sbjct: 318 RNKDRSRSREKSRDRERERERERE-REREREREREREREREREREREREREKDKKRDREE 376

Query: 468 -------KERQEASIREREKEVKESLST-AMRDRDKERDYHLKSEAEQ 587
                  + + E  +RE+E   +E L    +R+R K R+Y  ++E E+
Sbjct: 377 DEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREE 424

>sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich
           splicing regulatory protein 86) (SRrp86) (Splicing
           regulatory protein 508) (SRrp508)
          Length = 508

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +3

Query: 327 DAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRER-KERQEASIRERE 503
           D ++KI   +R K  D  K  E  KE  K+ +    ++ + +R+++R K++++   RERE
Sbjct: 263 DTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERERE 322

Query: 504 KEVKESLSTAMRDRDKERDYHLKSEAEQ 587
           KE +       +DRDKE++     E E+
Sbjct: 323 KEHE-------KDRDKEKEKEQDKEKER 343

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 28/85 (32%), Positives = 45/85 (52%)
 Frame = +3

Query: 333 KKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEV 512
           KK+  S +R K+   S   +  K+  +K K   R     ++DRE KER+    RE+EKE 
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK---EKDRE-KEREREKEREKEKER 295

Query: 513 KESLSTAMRDRDKERDYHLKSEAEQ 587
            ++     +DRDKER+   + + E+
Sbjct: 296 GKN-----KDRDKEREKDREKDKEK 315

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +3

Query: 354 QRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEVKESLSTA 533
           +R ++  SS+     K   +K+  +    S  K+D++R++ ++     RE+E   S+  +
Sbjct: 382 RRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 441

Query: 534 MRDRD 548
             DRD
Sbjct: 442 SNDRD 446

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
 Frame = +3

Query: 348 SDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKR---DRER-KERQEASIREREKEVK 515
           S  R K + S  R         + K   R  S  K+    RER K R  +  R++ K+ +
Sbjct: 206 SHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTR 265

Query: 516 ESLSTAMR----DRDKERDYHLKSEAEQ 587
           E +    R    DR+KER+   + E E+
Sbjct: 266 EKIKEKERVKEKDREKEREREKEREKEK 293

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +3

Query: 330 AKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIRERE-- 503
           ++ K D  +  +    S+R E      ++  T+ R++S  +  +E+ E+   S++E+E  
Sbjct: 411 SRNKKDKKREKERDHISERRE------RERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHN 464

Query: 504 KEVKESLSTAMRDRDKER 557
           KE   S+S  + D+D  R
Sbjct: 465 KEPDSSVSKEVDDKDAPR 482

>sp|Q8SX83|SPEN_DROME Split ends protein
          Length = 5560

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
 Frame = +3

Query: 327  DAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREK 506
            D   K + +QR++     ++E+  K+  K+ +   RE  + K  +E +E+++   +E EK
Sbjct: 1912 DTADKAEKNQRHEKEKKERQEKREKDLRKQVE---REEKDRKAQQEEREKEDRKAKEEEK 1968

Query: 507  EVKESLSTAMRDRD-KERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSD 683
            E +E    A  DR+ KER+     E EQ  K      I+  D   KE +    +D R  +
Sbjct: 1969 E-REREKKAQEDREKKEREERELREKEQRDKEQKEKEIREKDLREKEQR---ERDNREKE 2024

Query: 684  ISDK--LERPLRDSIFKE 731
            + DK   E+ +R+   +E
Sbjct: 2025 LRDKDLREKEMREKEQRE 2042

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
 Frame = +3

Query: 291  KENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENS--ETKRDRE 464
            KE K  +     D +K+++ +++ + A   +RE+  ++  ++ K   RE    E +  +E
Sbjct: 1925 KEKKERQEKREKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKE 1984

Query: 465  RKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKE 644
            R+ER+     +R+KE KE        R+KE+      E E   K L    ++  +   KE
Sbjct: 1985 REERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKE 2044

Query: 645  VKRVLRKDARWSDISDK 695
            + R   KD R  +  +K
Sbjct: 2045 LHR--EKDQREREHREK 2059

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
 Frame = +3

Query: 291  KENKIYKIAHWTDAKKKIDSDQRYKAA-----DSSKREEWFKEFLKKNKTNSRENSETKR 455
            K  K  K A  +D +K   + Q  K+A     D S   +   +  +KN+ + +E  E + 
Sbjct: 1873 KIKKSDKNASSSDKRKNSSTSQSSKSATPRIEDDSSEADDTADKAEKNQRHEKEKKERQE 1932

Query: 456  DRERKERQEASIREREK----EVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKT 623
             RE+  R++    E+++    E +E      ++ +KER+   K++ ++  K      ++ 
Sbjct: 1933 KREKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREERELRE 1992

Query: 624  SDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKE 731
             +   KE K    K+ R  D+ +K +R  RD+  KE
Sbjct: 1993 KEQRDKEQK---EKEIREKDLREKEQRE-RDNREKE 2024

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
 Frame = +3

Query: 327  DAKKKIDSDQRYKAADSSKREEWFKEF----LKKNKTNSRENSETK-RDRERKERQEASI 491
            D +KK   ++  +  +   +E+  KE     L++ +   R+N E + RD++ +E++    
Sbjct: 1979 DREKKEREERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREK 2038

Query: 492  REREKEVKESLSTAMRDRD-KERDYHLKSEAEQLFKV 599
             +REKE+        R++D +ER++  K ++ +   V
Sbjct: 2039 EQREKELH-------REKDQREREHREKEQSRRAMDV 2068

>sp|P21127|CD2L1_HUMAN PITSLRE serine/threonine-protein kinase CDC2L1
           (Galactosyltransferase-associated protein kinase
           p58/GTA) (Cell division cycle 2-like protein kinase 1)
           (CLK-1) (CDK11) (p58 CLK-1)
          Length = 795

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
 Frame = +3

Query: 309 KIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDR----ERKER 476
           K A   + +++ +  +R++      R EW ++   K +  +RE+S  +RDR    ERK  
Sbjct: 120 KHARVKEKEREHERRKRHREEQDKARREWERQ---KRREMAREHSRRERDRLEQLERKRE 176

Query: 477 QEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTD 611
           +E  +RE++KE +E      R  ++ ++   + E     + +  D
Sbjct: 177 RERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED 221

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
 Frame = +3

Query: 288 LKENKIYKIAHWTDAKKKIDSDQRYKAADS--------SKREEWFKEFLKKNKTNSRENS 443
           LKE K+ +    +D +   DS+++  +A+S        S+ EE  +E  ++  + S E+ 
Sbjct: 265 LKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESE 324

Query: 444 ETKRDRERKER------QEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLF 593
           E + + E +E       +EAS +  E+  +E +S    D ++E + HL    E  F
Sbjct: 325 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMS---EDEERENENHLLVVPESRF 377

>sp|P37709|TRHY_RABIT Trichohyalin
          Length = 1407

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 29/128 (22%), Positives = 70/128 (54%)
 Frame = +3

Query: 333 KKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEV 512
           K++ + ++ Y+  +  +REE  K   ++ +   RE  E +++ + ++R+   +RE E+ +
Sbjct: 557 KRRQEREREYREEEKLQREEDEKRRRQERERQYRELEELRQEEQLRDRK---LREEEQLL 613

Query: 513 KESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDISD 692
           +E     +R +++ER      E EQL +    +L +  +   +E +++LR++ +  ++  
Sbjct: 614 QEREEERLRRQERERKLR---EEEQLLRQEEQELRQERERKLREEEQLLRREEQ--ELRQ 668

Query: 693 KLERPLRD 716
           + ER LR+
Sbjct: 669 ERERKLRE 676

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRE 464
            LL+E +  ++      +K  + +Q  +  +   R+E  ++  ++ +   RE  E +++RE
Sbjct: 612  LLQEREEERLRRQERERKLREEEQLLRQEEQELRQERERKLREEEQLLRREEQELRQERE 671

Query: 465  RKERQEAS-IREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWK 641
            RK R+E   ++ERE+E         R R +ER   L+ E EQL +    +L +  +   +
Sbjct: 672  RKLREEEQLLQEREEE---------RLRRQERARKLREE-EQLLRQEEQELRQERERKLR 721

Query: 642  EVKRVLRKDARWSDISDKLERPLRD 716
            E +++LR++ +   +  + +R LR+
Sbjct: 722  EEEQLLRREEQL--LRQERDRKLRE 744

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
 Frame = +3

Query: 330  AKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEAS-IREREK 506
            A+K  + +Q  +  +   R+E  ++F ++ +   RE  E +R+R+RK R+E   ++ERE+
Sbjct: 1213 ARKLREEEQLLRQEEQELRQERDRKFREEEQLLRREEQELRRERDRKFREEEQLLQEREE 1272

Query: 507  EVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDI 686
            E       A + R++E     + + EQ  +       +  D  ++  ++  R++      
Sbjct: 1273 ERLRRQERARKLREEEEQLLFEEQEEQRLR-------QERDRRYRAEEQFAREEK----- 1320

Query: 687  SDKLERPLR 713
            S +LER LR
Sbjct: 1321 SRRLERELR 1329

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +3

Query: 381  KREEWFKEFLKKNKTNSRENSETKRDRERKERQEAS-IREREKEVKESLSTAMRDRDKER 557
            +R+E  ++  ++ +   RE  E +R+R RK R+E   ++ERE+E         R R +ER
Sbjct: 928  RRQERERKLREEEQLLRREEQELRRERARKLREEEQLLQEREEE---------RLRRQER 978

Query: 558  DYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKEHI 737
               L+ E EQL +    +L +  D  ++E +++L++        ++L R  RD  F+E  
Sbjct: 979  ARKLREE-EQLLRREEQELRQERDRKFREEEQLLQERE-----EERLRRQERDRKFREEE 1032

Query: 738  NSL 746
              L
Sbjct: 1033 RQL 1035

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +3

Query: 381  KREEWFKEFLKKNKTNSRENSETKRDRERKERQEAS-IREREKEVKESLSTAMRDRDKER 557
            +R+E  ++  ++ +   RE  E +++R+RK R+E   ++ERE+E         R R +ER
Sbjct: 974  RRQERARKLREEEQLLRREEQELRQERDRKFREEEQLLQEREEE---------RLRRQER 1024

Query: 558  DYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDISDKLERPLRDSIFKE 731
            D   + E  QL +  L +  +   D    ++  +R++        +L R  RD  F+E
Sbjct: 1025 DRKFREEERQLRRQELEEQFRQERDRKFRLEEQIRQEKE----EKQLRRQERDRKFRE 1078

 Score = 38.1 bits (87), Expect = 0.029
 Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRE 464
            LL+E +  ++     A+K  + +Q  +  +   R+E  ++  ++ +   +E  E +++R+
Sbjct: 1176 LLQEREEERLRRQERARKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQELRQERD 1235

Query: 465  RKERQEASI---------REREKEVKESLSTAM-----RDRDKERDYHLKSEAEQL 590
            RK R+E  +         RER+++ +E           R R +ER   L+ E EQL
Sbjct: 1236 RKFREEEQLLRREEQELRRERDRKFREEEQLLQEREEERLRRQERARKLREEEEQL 1291

 Score = 37.7 bits (86), Expect = 0.038
 Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRE 464
            LL+E +  ++      +K  + +Q  +  +   R+E  ++  ++ +   +E  E +++R+
Sbjct: 828  LLQEREEERLRRQERERKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQELRQERD 887

Query: 465  RKERQEAS-IREREKEVKESLSTAMRDRDKERDYHLKSEAEQ 587
            RK R+E   +R+ E+E+++      RDR    +  L  E+E+
Sbjct: 888  RKLREEEQLLRQEEQELRQE-----RDRKLREEEQLLQESEE 924

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 23/104 (22%), Positives = 52/104 (50%)
 Frame = +3

Query: 285 LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRE 464
           LL+E +  ++     A+K  + +Q  +  +   R+E  ++  ++ +   RE    +++R+
Sbjct: 680 LLQEREEERLRRQERARKLREEEQLLRQEEQELRQERERKLREEEQLLRREEQLLRQERD 739

Query: 465 RKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFK 596
           RK R+E  + +  +E         R R +ER+  L+ E ++ F+
Sbjct: 740 RKLREEEQLLQESEE--------ERLRRQEREQQLRRERDRKFR 775

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 29/129 (22%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
 Frame = +3

Query: 345  DSDQRYKAADS---SKREEWFKEFLKKNKTNSRENSETKRDRERKERQ--EASIREREKE 509
            + D++++  +     + EE  +   ++ K    E    +R+ ER  RQ  E  +RE E+ 
Sbjct: 769  ERDRKFREEEQLLQEREEERLRRQERERKLREEEQLLQEREEERLRRQERERKLREEEQL 828

Query: 510  VKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDIS 689
            ++E     +R +++ER      E EQL +    +L +      +E +++LR++ +  ++ 
Sbjct: 829  LQEREEERLRRQERERKLR---EEEQLLRQEEQELRQERARKLREEEQLLRQEEQ--ELR 883

Query: 690  DKLERPLRD 716
             + +R LR+
Sbjct: 884  QERDRKLRE 892

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
 Frame = +3

Query: 333  KKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASI-REREKE 509
            +++I  ++  K     +R+  F+E  ++ +   RE  + +R+R+RK R+E  + +ERE+E
Sbjct: 1055 EEQIRQEKEEKQLRRQERDRKFREEEQQRRRQEREQ-QLRRERDRKFREEEQLLQEREEE 1113

Query: 510  VKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRKDARWSDIS 689
                     R R +ER   L+ E EQL +     L +  D  ++E +++L++        
Sbjct: 1114 ---------RLRRQERARKLREE-EQLLRREEQLLRQERDRKFREEEQLLQESEEERLRR 1163

Query: 690  DKLERPLRD 716
             + ER LR+
Sbjct: 1164 QERERKLRE 1172

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 22/72 (30%), Positives = 37/72 (51%)
 Frame = +3

Query: 345  DSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEVKESL 524
            + D+RY+A +   REE  K    + +    E    +R+RERK R+E   R++E+E +   
Sbjct: 1304 ERDRRYRAEEQFAREE--KSRRLERELRQEEEQRRRRERERKFREEQLRRQQEEEQRR-- 1359

Query: 525  STAMRDRDKERD 560
               +R+R    D
Sbjct: 1360 -RQLRERQFRED 1370

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 25/112 (22%), Positives = 58/112 (51%)
 Frame = +3

Query: 330  AKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKE 509
            A+K  + +Q  +  +   R+E  ++  ++ +   +E  E +++R+RK      +RE E+ 
Sbjct: 865  ARKLREEEQLLRQEEQELRQERDRKLREEEQLLRQEEQELRQERDRK------LREEEQL 918

Query: 510  VKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKEVKRVLRK 665
            ++ES    +R +++ER      E EQL +    +L +      +E +++L++
Sbjct: 919  LQESEEERLRRQERERKLR---EEEQLLRREEQELRRERARKLREEEQLLQE 967

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 32/144 (22%), Positives = 65/144 (45%)
 Frame = +3

Query: 285  LLKENKIYKIAHWTDAKKKIDSDQRYKAADSSKREEWFKEFLKKNKTNSRENSETKRDRE 464
            LL+E +  ++      +K  + +Q  +     + EE  +   ++ K    E    +R+ E
Sbjct: 780  LLQEREEERLRRQERERKLREEEQLLQ----EREEERLRRQERERKLREEEQLLQEREEE 835

Query: 465  RKERQEASIREREKEVKESLSTAMRDRDKERDYHLKSEAEQLFKVLLTDLIKTSDDSWKE 644
            R  RQE   RER+   +E L        ++       E EQL +    +L +  D   +E
Sbjct: 836  RLRRQE---RERKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQELRQERDRKLRE 892

Query: 645  VKRVLRKDARWSDISDKLERPLRD 716
             +++LR++ +  ++  + +R LR+
Sbjct: 893  EEQLLRQEEQ--ELRQERDRKLRE 914

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 26/118 (22%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
 Frame = +3

Query: 381  KREEWFKEFLKKNKTNSRENSETKRDRE----RKERQEASIREREKEVKESLSTAMRDRD 548
            +R+E  ++  ++     RE  +  ++RE    R++ +E  +RE E+ ++E     +R ++
Sbjct: 758  RRQEREQQLRRERDRKFREEEQLLQEREEERLRRQERERKLREEEQLLQEREEERLRRQE 817

Query: 549  KERDYHLKSEAEQLFKVLLTDLIKTSDDSWK--EVKRVLRKDARWSDISDKLERPLRD 716
            +ER      E EQL +    + ++  +   K  E +++LR++ +  ++  +  R LR+
Sbjct: 818  RERKLR---EEEQLLQEREEERLRRQERERKLREEEQLLRQEEQ--ELRQERARKLRE 870

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = +3

Query: 399 KEFLKKNKTNSRENSETKRDRERKERQEASIRERE----KEVKESLSTAMRDRDKERD-Y 563
           +EF+++ +   RE  E KR+   +E+Q    RE+     +E +E L    R R++ R+  
Sbjct: 198 EEFIEEEQLRRREQQELKRELREEEQQRRERREQHERALQEEEEQLLRQRRWREEpreQQ 257

Query: 564 HLKSEAEQL 590
            L+ E E++
Sbjct: 258 QLRRELEEI 266

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = +3

Query: 384 REEWFKEFLKKNKTNSRE-NSETKRDRERKERQEASIRERE-KEVKESLSTAMRDRDKER 557
           REE   +  K+ +   RE   E K  RE  E++    RER+ +E++E     +R  ++ R
Sbjct: 548 REEEELQREKRRQEREREYREEEKLQREEDEKRRRQERERQYRELEE-----LRQEEQLR 602

Query: 558 DYHLKSEAEQLFKVLLTDLIKTSDDSWK--EVKRVLRKDARWSDISDKLERPLRD 716
           D  L+ E EQL +    + ++  +   K  E +++LR++ +  ++  + ER LR+
Sbjct: 603 DRKLREE-EQLLQEREEERLRRQERERKLREEEQLLRQEEQ--ELRQERERKLRE 654

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 26/114 (22%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +3

Query: 381  KREEWFKEFLKKNKTNSRENSETKRDRERKERQEASIREREKEVKESLSTAMRDRDKERD 560
            +R+E  ++  ++ +   RE    +++R+RK       RE E+ ++ES    +R +++ER 
Sbjct: 1116 RRQERARKLREEEQLLRREEQLLRQERDRK------FREEEQLLQESEEERLRRQERERK 1169

Query: 561  YHLKSEAEQLFKVLLTDLIKTSDDSWK--EVKRVLRKDARWSDISDKLERPLRD 716
                 E EQL +    + ++  + + K  E +++LR++ +  ++  +  R LR+
Sbjct: 1170 LR---EEEQLLQEREEERLRRQERARKLREEEQLLRQEEQ--ELRQERARKLRE 1218

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,341,885
Number of Sequences: 369166
Number of extensions: 1203848
Number of successful extensions: 8246
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7186
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7763237265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_024_E23
2. Dr_sW_006_N18