Planaria EST Database

DrC_00958

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00958
         (822 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P8G1|ILF2_XENTR  Interleukin enhancer-binding factor 2 ...   283   5e-76
sp|Q9CXY6|ILF2_MOUSE  Interleukin enhancer-binding factor 2 ...   276   5e-74
sp|Q9VG73|ILF2_DROME  Interleukin enhancer-binding factor 2 ...   275   8e-74
sp|Q6NZ06|ILF2_BRARE  Interleukin enhancer-binding factor 2 ...   273   5e-73
sp|Q7TP98|ILF2_RAT  Interleukin enhancer-binding factor 2 (L...   242   8e-64
sp|Q9Z1X4|ILF3_MOUSE  Interleukin enhancer-binding factor 3        65   2e-10
sp|Q9JIL3|ILF3_RAT  Interleukin enhancer-binding factor 3          65   2e-10
sp|Q12906|ILF3_HUMAN  Interleukin enhancer-binding factor 3 ...    65   3e-10
sp|Q6NXA4|ILF3_BRARE  Interleukin enhancer-binding factor 3 ...    62   2e-09
sp|Q9CDW7|RL22_LACLA  50S ribosomal protein L22                    33   0.72 

>sp|Q6P8G1|ILF2_XENTR Interleukin enhancer-binding factor 2 homolog
          Length = 388

 Score =  283 bits (723), Expect = 5e-76
 Identities = 141/272 (51%), Positives = 186/272 (68%)
 Frame = +3

Query: 6   ALVTQLSTIMDELIINPAAFEAAQFEELRLVGSYKKGTMLTGQNIADAVIIFKTLPTKEA 185
           +LVT+++ ++D LI+ P  FE  Q EE+R VGSYKKGTM TG N+AD V+I K LPT EA
Sbjct: 75  SLVTKINNVIDNLIVAPGNFEV-QIEEVRQVGSYKKGTMSTGHNVADLVVILKILPTLEA 133

Query: 186 IQAFKDYLVEKMRNSDLANARFLTSDVRTYGFEIMTPGCSLRILVATMPINLKKLDSQLH 365
           + A    +VE +R  D A    LT      GFEI +   +++IL+ T+P NL+KLD +LH
Sbjct: 134 VSALGIKVVETLRTQDPAEV--LTMLTNETGFEISSADATVKILITTVPPNLRKLDPELH 191

Query: 366 LDTKVIQGSLAAVRHIRWFEDNAGHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYA 545
           LD KV+Q +LAA+RH RWFE+NA H++             R+ GFE L+PWI+DLL HYA
Sbjct: 192 LDIKVLQSALAAIRHARWFEENASHSTVKVLIRLLKDLRSRFPGFEPLTPWILDLLGHYA 251

Query: 546 ILNNPTNNALPIHQAFKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCC 725
           ++NNPT   L ++ ++KR  Q+L+AGLFLPGS GI DPCE G  R+HT MTLE QD VC 
Sbjct: 252 VMNNPTRQPLALNVSYKRCLQMLAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQDMVCY 311

Query: 726 TAQTLLRVLCHGGYKEILGYSDRRINFATDMS 821
           TAQTL+R+L HGG+++ILG        AT+MS
Sbjct: 312 TAQTLVRILSHGGFRKILGLEGDASALATEMS 343

>sp|Q9CXY6|ILF2_MOUSE Interleukin enhancer-binding factor 2 (Nuclear factor of activated
           T-cells 45 kDa)
 sp|Q12905|ILF2_HUMAN Interleukin enhancer-binding factor 2 (Nuclear factor of activated
           T-cells 45 kDa)
 sp|Q5RFJ1|ILF2_PONPY Interleukin enhancer-binding factor 2
          Length = 390

 Score =  276 bits (706), Expect = 5e-74
 Identities = 137/272 (50%), Positives = 186/272 (68%)
 Frame = +3

Query: 6   ALVTQLSTIMDELIINPAAFEAAQFEELRLVGSYKKGTMLTGQNIADAVIIFKTLPTKEA 185
           +LVT+++ ++D LI+ P  FE  Q EE+R VGSYKKGTM TG N+AD V+I K LPT EA
Sbjct: 76  SLVTKINNVIDNLIVAPGTFEV-QIEEVRQVGSYKKGTMTTGHNVADLVVILKILPTLEA 134

Query: 186 IQAFKDYLVEKMRNSDLANARFLTSDVRTYGFEIMTPGCSLRILVATMPINLKKLDSQLH 365
           + A  + +VE +R  D +    LT      GFEI +   +++IL+ T+P NL+KLD +LH
Sbjct: 135 VAALGNKVVESLRAQDPSEV--LTMLTNETGFEISSSDATVKILITTVPPNLRKLDPELH 192

Query: 366 LDTKVIQGSLAAVRHIRWFEDNAGHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYA 545
           LD KV+Q +LAA+RH RWFE+NA  ++             R+ GFE L+PWI+DLL HYA
Sbjct: 193 LDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPLTPWILDLLGHYA 252

Query: 546 ILNNPTNNALPIHQAFKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCC 725
           ++NNPT   L ++ A++R  Q+L+AGLFLPGS GI DPCE G  R+HT MTLE QD VC 
Sbjct: 253 VMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQDMVCY 312

Query: 726 TAQTLLRVLCHGGYKEILGYSDRRINFATDMS 821
           TAQTL+R+L HGG+++ILG        A+++S
Sbjct: 313 TAQTLVRILSHGGFRKILGQEGDASYLASEIS 344

>sp|Q9VG73|ILF2_DROME Interleukin enhancer-binding factor 2 homolog
          Length = 396

 Score =  275 bits (704), Expect = 8e-74
 Identities = 137/262 (52%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
 Frame = +3

Query: 9   LVTQLSTIMDELIINPAAFEAAQFEELRLVGSYKKGTMLTGQNIADAVIIFKTLPTKEAI 188
           LVT++  ++D L++ P      Q EE+R VGS+KKGT+LTG N+AD V+I KTLPTKEA+
Sbjct: 77  LVTKVQAVLDNLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAV 136

Query: 189 QAFKDY----LVEKMRNSDLANARFLTSDVRTYGFEIMTPGCSLRILVATMPINLKKLDS 356
            A        L   M+   L      T  +   GF+I      +RIL+AT+P NL+KL+ 
Sbjct: 137 DALAKKVEADLKASMKTEVLTKGDQHTVQIHERGFDIANVHAKVRILIATLPQNLRKLEP 196

Query: 357 QLHLDTKVIQGSLAAVRHIRWFEDNAGHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLA 536
           ++HLD K++Q  LAA+RH RWFE+NA H+S            +R++ F  LS W++DL+A
Sbjct: 197 EIHLDHKLMQSHLAAIRHTRWFEENAHHSSIKVLIRILKDLTRRFDAFSPLSAWMLDLIA 256

Query: 537 HYAILNNPTNNALPIHQAFKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDE 716
           H AI+NNP+  ALPI+ AF+RVFQLLSAGLFLPGSAGI DP E G +R+HT+MTLE QD 
Sbjct: 257 HLAIMNNPSRQALPINLAFRRVFQLLSAGLFLPGSAGITDPTEPGHIRVHTAMTLEQQDV 316

Query: 717 VCCTAQTLLRVLCHGGYKEILG 782
            C T+QTLLRVL HGGYK ILG
Sbjct: 317 CCYTSQTLLRVLAHGGYKHILG 338

>sp|Q6NZ06|ILF2_BRARE Interleukin enhancer-binding factor 2 homolog
          Length = 387

 Score =  273 bits (697), Expect = 5e-73
 Identities = 137/273 (50%), Positives = 186/273 (68%), Gaps = 1/273 (0%)
 Frame = +3

Query: 6   ALVTQLSTIMDELIINPAAFEAAQFEELRLVGSYKKGTMLTGQNIADAVIIFKTLPTKEA 185
           +LVT+++ ++D LI+ P  FE  Q EE+R VGSYKKGTM  G N+AD V+I K LPT EA
Sbjct: 76  SLVTKINNVIDNLIVAPGNFEV-QIEEVRQVGSYKKGTMTAGHNVADLVVILKILPTLEA 134

Query: 186 IQAFKDYLVEKMRNSDLANA-RFLTSDVRTYGFEIMTPGCSLRILVATMPINLKKLDSQL 362
           + A  + +VE +R  D +     LT++    GFEI +   +++IL+ T+P NL+KLD +L
Sbjct: 135 VAALGNKVVETLRTQDPSEVLSMLTNET---GFEISSADATVKILITTVPPNLRKLDPEL 191

Query: 363 HLDTKVIQGSLAAVRHIRWFEDNAGHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHY 542
           HLD KV+Q +LAA+RH RWFE+NA  ++             R+ GFE L+PWI+DLL H 
Sbjct: 192 HLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDIRVRFPGFEPLTPWILDLLGHS 251

Query: 543 AILNNPTNNALPIHQAFKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVC 722
           A++N+P+   LP++ A++R  Q+L+AGLFLPGS GI DPCE G  R+HT MTLE QD VC
Sbjct: 252 AVMNHPSRQPLPLNVAYRRCLQMLAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQDMVC 311

Query: 723 CTAQTLLRVLCHGGYKEILGYSDRRINFATDMS 821
            TAQTL+RVL HGGY++ILG         T+MS
Sbjct: 312 FTAQTLVRVLSHGGYRKILGLEGDASYLTTEMS 344

>sp|Q7TP98|ILF2_RAT Interleukin enhancer-binding factor 2 (Liver regeneration-related
           protein LRRG031)
          Length = 463

 Score =  242 bits (618), Expect = 8e-64
 Identities = 122/249 (48%), Positives = 159/249 (63%)
 Frame = +3

Query: 75  QFEELRLVGSYKKGTMLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANARFL 254
           Q EE+R VGSYKKGTM TG N+AD V+I K LPT                        FL
Sbjct: 193 QIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT------------------------FL 228

Query: 255 TSDVRTYGFEIMTPGCSLRILVATMPINLKKLDSQLHLDTKVIQGSLAAVRHIRWFEDNA 434
           T      GFEI +   +++IL+ T+P NL+KLD +LHLD KV+Q +LAA+RH RWFE+NA
Sbjct: 229 TMLTNETGFEISSSDATVKILITTVPPNLRKLDPELHLDIKVLQSALAAIRHARWFEENA 288

Query: 435 GHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYAILNNPTNNALPIHQAFKRVFQLL 614
             ++             R+ GFE L+PWI+DLL HYA++NNPT   L ++ A++R  Q+L
Sbjct: 289 SQSTVKVLIRLLKDLRIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQIL 348

Query: 615 SAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCCTAQTLLRVLCHGGYKEILGYSDR 794
           +AGLFLPGS GI DPCE G  R+HT MTLE QD VC TAQTL+R+L HGG+++ILG    
Sbjct: 349 AAGLFLPGSVGITDPCESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGD 408

Query: 795 RINFATDMS 821
               A+++S
Sbjct: 409 ASYLASEIS 417

>sp|Q9Z1X4|ILF3_MOUSE Interleukin enhancer-binding factor 3
          Length = 898

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
 Frame = +3

Query: 96  VGSYKKGTMLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANARFLTS--DVR 269
           VG   KG +L G    + V++ K  PT   +    D L  ++          L S  D  
Sbjct: 95  VGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAA 154

Query: 270 TYGFEIMTPGCSLRILVATMPINLKKLDSQLH------------LDTKVIQGSLAAVRHI 413
                   P  SL I + T P+  ++++  L             LD +    +LA++RH 
Sbjct: 155 IVIKNTKEPPLSLTIHL-TSPVVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHA 213

Query: 414 RWFEDNA-GHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYAILNNPTNNALPIHQA 590
           +WF+  A G  S             R   +  L  W ++LL   +I     N  +   +A
Sbjct: 214 KWFQARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEA 271

Query: 591 FKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCCTAQTLLRVLCHGGYK 770
            +RV + L++G+ +P  +GI DPCE+        +  + ++++  +AQ  LR+   G   
Sbjct: 272 LRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLH 331

Query: 771 EILG 782
           ++LG
Sbjct: 332 KVLG 335

>sp|Q9JIL3|ILF3_RAT Interleukin enhancer-binding factor 3
          Length = 897

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
 Frame = +3

Query: 96  VGSYKKGTMLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANARFLTS--DVR 269
           VG   KG +L G    + V++ K  PT   +    D L  ++          L S  D  
Sbjct: 95  VGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAA 154

Query: 270 TYGFEIMTPGCSLRILVATMPINLKKLDSQLH------------LDTKVIQGSLAAVRHI 413
                   P  SL I + T P+  ++++  L             LD +    +LA++RH 
Sbjct: 155 IVIKNTKEPPLSLTIHL-TSPVVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHA 213

Query: 414 RWFEDNA-GHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYAILNNPTNNALPIHQA 590
           +WF+  A G  S             R   +  L  W ++LL   +I     N  +   +A
Sbjct: 214 KWFQARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEA 271

Query: 591 FKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCCTAQTLLRVLCHGGYK 770
            +RV + L++G+ +P  +GI DPCE+        +  + ++++  +AQ  LR+   G   
Sbjct: 272 LRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLH 331

Query: 771 EILG 782
           ++LG
Sbjct: 332 KVLG 335

>sp|Q12906|ILF3_HUMAN Interleukin enhancer-binding factor 3 (Nuclear factor of activated
           T-cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding
           protein 76) (DRBP76) (Translational control protein 80)
           (TCP80) (Nuclear factor associated with dsRNA) (NFAR)
           (M-phase phosphoprotein 4) (MPP4)
          Length = 894

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
 Frame = +3

Query: 96  VGSYKKGTMLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANARFLTS--DVR 269
           VG   KG +L G    + V++ K  PT   +    D L  ++          L S  D  
Sbjct: 95  VGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKVADNLAIQLAAVTEDKYEILQSVDDAA 154

Query: 270 TYGFEIMTPGCSLRILVATMPINLKKLDSQLH------------LDTKVIQGSLAAVRHI 413
                   P  SL I + T P+  ++++  L             LD +    +LA++RH 
Sbjct: 155 IVIKNTKEPPLSLTIHL-TSPVVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHA 213

Query: 414 RWFEDNA-GHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYAILNNPTNNALPIHQA 590
           +WF+  A G  S             R   +  L  W ++LL   +I     N  +   +A
Sbjct: 214 KWFQARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEA 271

Query: 591 FKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCCTAQTLLRVLCHGGYK 770
            +RV + L++G+ +P  +GI DPCE+        +  + ++++  +AQ  LR+   G   
Sbjct: 272 LRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLH 331

Query: 771 EILG 782
           ++LG
Sbjct: 332 KVLG 335

>sp|Q6NXA4|ILF3_BRARE Interleukin enhancer-binding factor 3 homolog
          Length = 833

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 16/245 (6%)
 Frame = +3

Query: 96  VGSYKKGTMLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANARFLTSDVRTY 275
           VG   KG +L G    + V++ K  PT   ++   D L  +++         +   +R  
Sbjct: 96  VGLVAKGLLLKGDLDLELVLLCKEKPTITLLKKVSDNLAVQLKQLVTEEKYDVKPCIRDA 155

Query: 276 GFEIMT---PGCSLRILVATMPINLKKLDSQLH------------LDTKVIQGSLAAVRH 410
              I     P  +L I + T P+  ++++ Q              LD +    +LA++RH
Sbjct: 156 TIVIKNAKEPPLTLTIHL-TSPLVREEVEKQAAGETLSVIDPPDVLDRQKCLTALASLRH 214

Query: 411 IRWFEDNA-GHTSXXXXXXXXXXXXQRYEGFEALSPWIIDLLAHYAILNNPTNNALPIHQ 587
            +WF+  A G  S             R   +  L  W ++LL   AI     N  +   +
Sbjct: 215 AKWFQARANGLRSCVIVIRILRDLCARVPTWSPLRGWPLELLCEKAI--GTGNRPMGAGE 272

Query: 588 AFKRVFQLLSAGLFLPGSAGIIDPCEQGRVRLHTSMTLEHQDEVCCTAQTLLRVLCHGGY 767
           A +RV + L++G+ +   +GI DPCE+      + +  + ++++  +AQ  LR+   G  
Sbjct: 273 ALRRVLECLASGILMADGSGICDPCEKELTDAISHVDRQQREDITQSAQHALRLSAFGQL 332

Query: 768 KEILG 782
            ++LG
Sbjct: 333 HKVLG 337

>sp|Q9CDW7|RL22_LACLA 50S ribosomal protein L22
          Length = 115

 Score = 33.5 bits (75), Expect = 0.72
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 120 MLTGQNIADAVIIFKTLPTKEAIQAFKDYLVEKMRNSDLANA 245
           ++ G+ +ADA+ I K  PTK A++      VE + NS +ANA
Sbjct: 27  LIRGKRVADAIAILKFTPTKAAVE------VENVLNSAIANA 62

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,294,577
Number of Sequences: 369166
Number of extensions: 1684723
Number of successful extensions: 3530
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3521
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00958

  1. Dr_sW_024_D19
  2. Dr_sW_002_E20