Planaria EST Database

DrC_00946

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00946
         (853 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99M04|LIAS_MOUSE  Lipoic acid synthetase, mitochondrial ...   422   e-118
sp|O43766|LIAS_HUMAN  Lipoic acid synthetase, mitochondrial ...   417   e-116
sp|O13642|LIPA_SCHPO  Probable lipoic acid synthetase, mitoc...   367   e-101
sp|P32875|LIP5_YEAST  Lipoic acid synthetase, mitochondrial ...   360   4e-99
sp|Q9HN78|LIPA_HALSA  Probable lipoyl synthase (Lipoic acid ...   303   5e-82
sp|Q9RWA4|LIPA_DEIRA  Lipoyl synthase (Lipoic acid synthase)...   273   3e-73
sp|Q4JBV4|LIPA_SULAC  Probable lipoyl synthase (Lipoic acid ...   262   8e-70
sp|Q97U63|LIPA_SULSO  Probable lipoyl synthase (Lipoic acid ...   252   1e-66
sp|Q6L1L7|LIPA_PICTO  Probable lipoyl synthase (Lipoic acid ...   248   2e-65
sp|Q8ERL8|LIPA_OCEIH  Lipoyl synthase (Lipoic acid synthase)...   245   1e-64

>sp|Q99M04|LIAS_MOUSE Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
           synthase) (mLIP1)
          Length = 373

 Score =  422 bits (1085), Expect = e-118
 Identities = 200/279 (71%), Positives = 233/279 (83%)
 Frame = +3

Query: 15  SIKRVKGEHLHLPEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENK 194
           ++KR KGE L LP WLK  IP G N++ L  +LRNL+LHTVCEEARCPNIGECWGGGE  
Sbjct: 64  NLKRQKGERLRLPPWLKTKIPMGKNYNKLKNTLRNLSLHTVCEEARCPNIGECWGGGEYA 123

Query: 195 TATATIMLLGDTCTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDD 374
           TATATIML+GDTCTRGC+FCSVKT+R PP  D NEP NTA A+A+WGLDYVVLTSVDRDD
Sbjct: 124 TATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPDNTAKAIAEWGLDYVVLTSVDRDD 183

Query: 375 LIDGGSNHFAETVKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSL 554
           + DGG+ H A+TV  +K+RNP ILVECLTPDF+GDL+ VE +  SGLDVYAHNVETV  L
Sbjct: 184 VADGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPEL 243

Query: 555 QRFVRDHRANFEQSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCL 734
           QR VRD RANF+QSL VL+HAK  +  +V+KTS+MLGLGETD++V  TLK LR   VDCL
Sbjct: 244 QRKVRDPRANFDQSLRVLRHAKEVQPDVVSKTSIMLGLGETDEQVYATLKALRAADVDCL 303

Query: 735 TVGQYIQPTKRHLKVKEYVHPDKFKYWETMGNKLGFLYT 851
           T+GQY+QPTKRHLKV+EYV P+KFKYWE +GN+LGFLYT
Sbjct: 304 TLGQYMQPTKRHLKVEEYVTPEKFKYWEKVGNELGFLYT 342

>sp|O43766|LIAS_HUMAN Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
           synthase) (HUSSY-01)
          Length = 372

 Score =  417 bits (1072), Expect = e-116
 Identities = 194/279 (69%), Positives = 230/279 (82%)
 Frame = +3

Query: 15  SIKRVKGEHLHLPEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENK 194
           ++KR KGE L LP WLK  IP G N++ L  +LRNLNLHTVCEEARCPNIGECWGGGE  
Sbjct: 65  NLKRQKGERLRLPPWLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYA 124

Query: 195 TATATIMLLGDTCTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDD 374
           TATATIML+GDTCTRGC+FCSVKT+R PP  D +EP NTA A+A+WGLDYVVLTSVDRDD
Sbjct: 125 TATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDRDD 184

Query: 375 LIDGGSNHFAETVKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSL 554
           + DGG+ H A+TV  +K+RNP ILVECLTPDF+GDLK +E +  SGLDVYAHNVETV  L
Sbjct: 185 MPDGGAEHIAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGLDVYAHNVETVPEL 244

Query: 555 QRFVRDHRANFEQSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCL 734
           Q  VRD R NF+QSL VLKHAK  +  +++KTS+MLGLGE D++V  T+K LRE  VDCL
Sbjct: 245 QSKVRDPRVNFDQSLRVLKHAKKVQPDVISKTSIMLGLGENDEQVYATMKALREADVDCL 304

Query: 735 TVGQYIQPTKRHLKVKEYVHPDKFKYWETMGNKLGFLYT 851
           T+GQY+QPT+RHLKV+EY+ P+KFKYWE +GN+LGF YT
Sbjct: 305 TLGQYMQPTRRHLKVEEYITPEKFKYWEKVGNELGFHYT 343

>sp|O13642|LIPA_SCHPO Probable lipoic acid synthetase, mitochondrial precursor (Lip-syn)
           (Lipoate synthetase)
          Length = 370

 Score =  367 bits (942), Expect = e-101
 Identities = 173/270 (64%), Positives = 208/270 (77%)
 Frame = +3

Query: 39  HLHLPEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIML 218
           H  LP WLK  +P G NF+ +   LR  +LHTVCEEA+CPNIGECWGG +   ATATIML
Sbjct: 67  HKRLPSWLKTKVPLGTNFNRIKHDLRGSHLHTVCEEAKCPNIGECWGGKDKSRATATIML 126

Query: 219 LGDTCTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNH 398
           +GDTCTRGC+FCSVKTSR P   DPNEP NTA A+ QW L Y+VLTSVDRDDL D G+NH
Sbjct: 127 MGDTCTRGCRFCSVKTSRRPGPLDPNEPENTAEAIKQWNLGYIVLTSVDRDDLTDLGANH 186

Query: 399 FAETVKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHR 578
            A+T+++IK++ P+ILVE LTPDF G +  VE +  SGLDV+AHNVETV+ L  FVRD R
Sbjct: 187 IAKTIQKIKEKAPHILVEALTPDFSGRMDLVEIVAKSGLDVFAHNVETVEELTPFVRDRR 246

Query: 579 ANFEQSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQP 758
           A + QSL+VLKH K     L+TKTS+MLGLGETD E++ TLK L E  VD +T GQY++P
Sbjct: 247 ATYRQSLSVLKHVKKTCPHLITKTSIMLGLGETDAEILTTLKDLLEHNVDVVTFGQYMRP 306

Query: 759 TKRHLKVKEYVHPDKFKYWETMGNKLGFLY 848
           TKRHLKV+EYVHP KF+YW+ +  KLGFLY
Sbjct: 307 TKRHLKVQEYVHPKKFEYWKEVAEKLGFLY 336

>sp|P32875|LIP5_YEAST Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
           synthase)
          Length = 414

 Score =  360 bits (923), Expect = 4e-99
 Identities = 170/267 (63%), Positives = 207/267 (77%)
 Frame = +3

Query: 48  LPEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGD 227
           LP WLK  IPKG N+  L   ++ L L TVCEEARCPNIGECWGG +   ATATIMLLGD
Sbjct: 120 LPRWLKVPIPKGTNYHKLKGDVKELGLSTVCEEARCPNIGECWGGKDKSKATATIMLLGD 179

Query: 228 TCTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAE 407
           TCTRGC+FCSVKT+RTP  PDP EP NTA A+ +WGL YVVLT+VDRDDL+DGG+NH AE
Sbjct: 180 TCTRGCRFCSVKTNRTPSKPDPMEPENTAEAIKRWGLGYVVLTTVDRDDLVDGGANHLAE 239

Query: 408 TVKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANF 587
           TV++IK++ PN LVE L+ DF+GDLK V+ +   GLDVYAHN+ETV+SL   VRD RA +
Sbjct: 240 TVRKIKQKAPNTLVETLSGDFRGDLKMVDIMAQCGLDVYAHNLETVESLTPHVRDRRATY 299

Query: 588 EQSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKR 767
            QSL+VL+ AK     L+TKTS+MLGLGETD+++  TLK LR I  D +T GQY++PTKR
Sbjct: 300 RQSLSVLERAKATVPSLITKTSIMLGLGETDEQITQTLKDLRNIQCDVVTFGQYMRPTKR 359

Query: 768 HLKVKEYVHPDKFKYWETMGNKLGFLY 848
           H+KV EYV P+KF YW+    ++GFLY
Sbjct: 360 HMKVVEYVKPEKFDYWKERALEMGFLY 386

>sp|Q9HN78|LIPA_HALSA Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 311

 Score =  303 bits (775), Expect = 5e-82
 Identities = 150/267 (56%), Positives = 196/267 (73%), Gaps = 1/267 (0%)
 Frame = +3

Query: 51  PEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDT 230
           PEWLK   P G  F+++ ++LR+ +LHTVCEEA CPN+GECW G +    TAT ML+GD 
Sbjct: 7   PEWLKMRPPSGERFTDIKETLRDNDLHTVCEEASCPNMGECWSGRDGP-GTATFMLMGDR 65

Query: 231 CTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAET 410
           C+RGC FC VKT    P  DP+EP N A ++A+ GLDYVVLTSVDRDDL D G+ HFA T
Sbjct: 66  CSRGCNFCDVKTGGMEPL-DPDEPANVAESVAEIGLDYVVLTSVDRDDLDDQGAGHFART 124

Query: 411 VKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFE 590
           ++EIK+R+P+ILVE L PDF+G+   V+ I+D+G DV AHN+ETV   Q  VRD RA +E
Sbjct: 125 IREIKERDPSILVEVLIPDFQGEKSLVQKIIDAGPDVIAHNIETVARRQVPVRDRRAGYE 184

Query: 591 QSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRH 770
           QSL+VL++    +S + TKTS+MLG+GE D EV  TL  LRE GVD +T+GQY+QP++ H
Sbjct: 185 QSLSVLEYV-TRESDIYTKTSIMLGVGEYDHEVYQTLGDLREAGVDVVTLGQYLQPSRSH 243

Query: 771 LKVKEYVHPDKFKYWETMG-NKLGFLY 848
           L V +YVHP KF+ W+ +  ++ GFLY
Sbjct: 244 LDVADYVHPQKFETWQRVAESEFGFLY 270

>sp|Q9RWA4|LIPA_DEIRA Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 331

 Score =  273 bits (699), Expect = 3e-73
 Identities = 138/265 (52%), Positives = 179/265 (67%)
 Frame = +3

Query: 51  PEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDT 230
           PEWLK +IP G  F+ + K ++   LHTVCEEA CPNIGECW  G     TAT ML+G  
Sbjct: 31  PEWLKVTIPTGQVFTEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHI 85

Query: 231 CTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAET 410
           CTR C+FC+V T       D +EP + A ++    L YVVLTSVDRDDL DGG+ HFA+T
Sbjct: 86  CTRACRFCAVDTGNPMGKLDLDEPRSVADSVRLMDLKYVVLTSVDRDDLPDGGAYHFAKT 145

Query: 411 VKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFE 590
           VK IK+ NP   VE LTPDF G+  CV+ ++DSG+D YA N+ETV+ L   VRD RA+++
Sbjct: 146 VKAIKEVNPQTRVEALTPDFGGNTACVDLVLDSGVDTYAQNLETVRRLTHPVRDIRASYD 205

Query: 591 QSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRH 770
           ++L+VL HAK  +  ++TKTSLMLGLGET +E+ + +   R  GVD LT GQY++PT  H
Sbjct: 206 RTLSVLAHAKQARPDVITKTSLMLGLGETREEIREAMADCRAAGVDVLTFGQYLRPTMHH 265

Query: 771 LKVKEYVHPDKFKYWETMGNKLGFL 845
           L V+ Y+ P +F      G +LGFL
Sbjct: 266 LPVERYISPAEFDEIREEGMQLGFL 290

>sp|Q4JBV4|LIPA_SULAC Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 286

 Score =  262 bits (670), Expect = 8e-70
 Identities = 129/254 (50%), Positives = 182/254 (71%)
 Frame = +3

Query: 87  NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 266
           NF  L++ +    + TVCEEA CPNI ECWG G     TAT M++GD CTRGC+FC VK 
Sbjct: 12  NFKKLSRIVSEKGISTVCEEALCPNIMECWGSG-----TATFMIMGDICTRGCRFCYVKK 66

Query: 267 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 446
            + P   D  EP+  A A+ + GLDYVV+TSVDRDDL DGG++HF++ VK +K+ NP+++
Sbjct: 67  GK-PVLLDHEEPIKVAEAVREMGLDYVVITSVDRDDLADGGASHFSQVVKAVKEMNPDVI 125

Query: 447 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 626
           VE LTPDF G+ + VE ++ SG+DV+AHNVETV+SL   VRD RA++EQSL VL +AK  
Sbjct: 126 VEVLTPDFMGNKELVEKVIGSGVDVFAHNVETVRSLTPLVRDARASYEQSLRVLSYAK-- 183

Query: 627 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 806
              +V K+S++LGLGE+ +EV++T+K LR +GVD L + QY++P+ + L+VK+  + +++
Sbjct: 184 --NVVKKSSILLGLGESLEEVVETMKDLRNVGVDILVLSQYMRPSIKQLEVKKRYNMEEY 241

Query: 807 KYWETMGNKLGFLY 848
           K  E +   LGF Y
Sbjct: 242 KELEKIAYSLGFSY 255

>sp|Q97U63|LIPA_SULSO Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 285

 Score =  252 bits (643), Expect = 1e-66
 Identities = 122/258 (47%), Positives = 179/258 (69%)
 Frame = +3

Query: 69  SIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCK 248
           ++ +  NF  + + ++  ++ TVCEEA CPNI ECWG G     TAT M++G  CTRGC+
Sbjct: 8   AVYENENFKRVAEIVKKKSIATVCEEALCPNIMECWGSG-----TATFMIMGSICTRGCR 62

Query: 249 FCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKK 428
           FC V   +  P  D  EP   A A+ +  LDYVV+TSVDRDDL DGG+ HFA  VK +K+
Sbjct: 63  FCYVLKGKPSPLDD-EEPKRVAEAVKEMELDYVVITSVDRDDLSDGGAQHFANVVKTVKE 121

Query: 429 RNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVL 608
            NP I+VE LTPDF+G++  V+ ++D+G+DV+AHNVETV+ L   VRD RA++EQSLNVL
Sbjct: 122 LNPGIIVEVLTPDFRGNIDAVKKVIDAGVDVFAHNVETVRRLTPIVRDPRASYEQSLNVL 181

Query: 609 KHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEY 788
           K+A+     ++ K+S++LGLGET  E+++T++ LR +GV  L + QY++P+++ L+VK+ 
Sbjct: 182 KYAE----NVIKKSSILLGLGETWDEIVETMRDLRSVGVSILVLSQYMRPSRKQLEVKKR 237

Query: 789 VHPDKFKYWETMGNKLGF 842
              ++FK  E +   +GF
Sbjct: 238 YTLEEFKELEEIAYSMGF 255

>sp|Q6L1L7|LIPA_PICTO Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 286

 Score =  248 bits (633), Expect = 2e-65
 Identities = 127/262 (48%), Positives = 174/262 (66%)
 Frame = +3

Query: 63  KRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRG 242
           K  +P G  ++ +  +L   NL+TVCEEA CPNI ECW  G     TAT M++G  C+RG
Sbjct: 9   KVKLPSGERYTFIKSTLSARNLYTVCEEAHCPNIAECWESG-----TATFMIMGSNCSRG 63

Query: 243 CKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEI 422
           C+FC+V   R  P  DP EP     ++    LDYVV+TSVDRDDL D GS+HFA  ++ +
Sbjct: 64  CRFCAVTHGRMLPL-DPMEPEKVYESVKMMNLDYVVITSVDRDDLPDKGSSHFAAVIRRL 122

Query: 423 KKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLN 602
           K  +  I +E L PDF G  K ++ I+D   DV AHN+ETV+ L + VRD RA ++QSLN
Sbjct: 123 K--DLKIKIEVLIPDFSGVHKFIDKIIDERPDVIAHNIETVRRLTKTVRDPRAGYDQSLN 180

Query: 603 VLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVK 782
           VL++ K  +S ++TK+S+MLGLGETD EVI+TL  L + GVD +T+GQY++PTK+ L+VK
Sbjct: 181 VLRYVKS-RSNIITKSSIMLGLGETDDEVIETLHDLHDAGVDIVTIGQYLRPTKKQLEVK 239

Query: 783 EYVHPDKFKYWETMGNKLGFLY 848
           EY   ++FK  E     +GF +
Sbjct: 240 EYSPMERFKNLEESAYSIGFSF 261

>sp|Q8ERL8|LIPA_OCEIH Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
           (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
           protein lipA) (Lip-syn)
          Length = 314

 Score =  245 bits (626), Expect = 1e-64
 Identities = 124/268 (46%), Positives = 177/268 (66%)
 Frame = +3

Query: 39  HLHLPEWLKRSIPKGNNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIML 218
           H+  P+WLK  I    ++ NL K +R+  L+TVCEEARCPN+ ECW    ++  TAT M+
Sbjct: 7   HVRKPDWLKTRINTNKSYRNLKKLMRDNRLNTVCEEARCPNLHECW----SERKTATFMI 62

Query: 219 LGDTCTRGCKFCSVKTSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNH 398
           LGDTCTRGC+FC+VKT   P   D  EP   A ++   GL +VV+T+V RDDL DGG+  
Sbjct: 63  LGDTCTRGCRFCAVKTG-LPNELDWGEPERVADSVTVMGLKHVVVTAVARDDLNDGGAAV 121

Query: 399 FAETVKEIKKRNPNILVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHR 578
           FAETV+ I+++NP   +E L  D KGD + + T++DSG D++ HN+ETV+ L + VR  R
Sbjct: 122 FAETVRAIRRKNPGCTIEILPSDMKGDYESLHTLMDSGPDIFNHNIETVRRLTKRVR-AR 180

Query: 579 ANFEQSLNVLKHAKLYKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQP 758
           A +++SL +L+  K       TK+S+M+GLGE   E+I  +  L    VD +T+GQY+QP
Sbjct: 181 AMYDRSLELLRRVKEIAPNTPTKSSIMVGLGEEKDEIIQAMDDLLAHNVDIVTLGQYLQP 240

Query: 759 TKRHLKVKEYVHPDKFKYWETMGNKLGF 842
           TK+HL+V  Y HPD+F+  + +  + GF
Sbjct: 241 TKKHLEVVRYYHPDEFEELKNIALEKGF 268

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,925,717
Number of Sequences: 369166
Number of extensions: 1924579
Number of successful extensions: 7026
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6691
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00946

  1. Dr_sW_023_P03
  2. Dr_sW_023_N04