Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_N04
(770 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99M04|LIAS_MOUSE Lipoic acid synthetase, mitochondrial ... 393 e-109
sp|O43766|LIAS_HUMAN Lipoic acid synthetase, mitochondrial ... 388 e-107
sp|O13642|LIPA_SCHPO Probable lipoic acid synthetase, mitoc... 348 1e-95
sp|P32875|LIP5_YEAST Lipoic acid synthetase, mitochondrial ... 341 1e-93
sp|Q9HN78|LIPA_HALSA Probable lipoyl synthase (Lipoic acid ... 287 2e-77
sp|Q4JBV4|LIPA_SULAC Probable lipoyl synthase (Lipoic acid ... 262 7e-70
sp|Q9RWA4|LIPA_DEIRA Lipoyl synthase (Lipoic acid synthase)... 257 3e-68
sp|Q97U63|LIPA_SULSO Probable lipoyl synthase (Lipoic acid ... 251 2e-66
sp|Q6L1L7|LIPA_PICTO Probable lipoyl synthase (Lipoic acid ... 241 1e-63
sp|Q9Y9E3|LIPA_AERPE Probable lipoyl synthase (Lipoic acid ... 235 1e-61
>sp|Q99M04|LIAS_MOUSE Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
synthase) (mLIP1)
Length = 373
Score = 393 bits (1009), Expect = e-109
Identities = 186/255 (72%), Positives = 217/255 (85%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
N++ L +LRNL+LHTVCEEARCPNIGECWGGGE TATATIML+GDTCTRGC+FCSVKT
Sbjct: 88 NYNKLKNTLRNLSLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKT 147
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
+R PP D NEP NTA A+A+WGLDYVVLTSVDRDD+ DGG+ H A+TV +K+RNP IL
Sbjct: 148 ARNPPPLDANEPDNTAKAIAEWGLDYVVLTSVDRDDVADGGAEHIAKTVSCLKERNPKIL 207
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VECLTPDF+GDL+ VE + SGLDVYAHNVETV LQR VRD RANF+QSL VL+HAK
Sbjct: 208 VECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLRHAKEV 267
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
+ +V+KTS+MLGLGETD++V TLK LR VDCLT+GQY+QPTKRHLKV+EYV P+KF
Sbjct: 268 QPDVVSKTSIMLGLGETDEQVYATLKALRAADVDCLTLGQYMQPTKRHLKVEEYVTPEKF 327
Query: 724 KYWETMGNKLGFLYT 768
KYWE +GN+LGFLYT
Sbjct: 328 KYWEKVGNELGFLYT 342
>sp|O43766|LIAS_HUMAN Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
synthase) (HUSSY-01)
Length = 372
Score = 388 bits (996), Expect = e-107
Identities = 180/255 (70%), Positives = 214/255 (83%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
N++ L +LRNLNLHTVCEEARCPNIGECWGGGE TATATIML+GDTCTRGC+FCSVKT
Sbjct: 89 NYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKT 148
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
+R PP D +EP NTA A+A+WGLDYVVLTSVDRDD+ DGG+ H A+TV +K+RNP IL
Sbjct: 149 ARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDRDDMPDGGAEHIAKTVSYLKERNPKIL 208
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VECLTPDF+GDLK +E + SGLDVYAHNVETV LQ VRD R NF+QSL VLKHAK
Sbjct: 209 VECLTPDFRGDLKAIEKVALSGLDVYAHNVETVPELQSKVRDPRVNFDQSLRVLKHAKKV 268
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
+ +++KTS+MLGLGE D++V T+K LRE VDCLT+GQY+QPT+RHLKV+EY+ P+KF
Sbjct: 269 QPDVISKTSIMLGLGENDEQVYATMKALREADVDCLTLGQYMQPTRRHLKVEEYITPEKF 328
Query: 724 KYWETMGNKLGFLYT 768
KYWE +GN+LGF YT
Sbjct: 329 KYWEKVGNELGFHYT 343
>sp|O13642|LIPA_SCHPO Probable lipoic acid synthetase, mitochondrial precursor (Lip-syn)
(Lipoate synthetase)
Length = 370
Score = 348 bits (892), Expect = 1e-95
Identities = 165/254 (64%), Positives = 199/254 (78%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
NF+ + LR +LHTVCEEA+CPNIGECWGG + ATATIML+GDTCTRGC+FCSVKT
Sbjct: 83 NFNRIKHDLRGSHLHTVCEEAKCPNIGECWGGKDKSRATATIMLMGDTCTRGCRFCSVKT 142
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
SR P DPNEP NTA A+ QW L Y+VLTSVDRDDL D G+NH A+T+++IK++ P+IL
Sbjct: 143 SRRPGPLDPNEPENTAEAIKQWNLGYIVLTSVDRDDLTDLGANHIAKTIQKIKEKAPHIL 202
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VE LTPDF G + VE + SGLDV+AHNVETV+ L FVRD RA + QSL+VLKH K
Sbjct: 203 VEALTPDFSGRMDLVEIVAKSGLDVFAHNVETVEELTPFVRDRRATYRQSLSVLKHVKKT 262
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
L+TKTS+MLGLGETD E++ TLK L E VD +T GQY++PTKRHLKV+EYVHP KF
Sbjct: 263 CPHLITKTSIMLGLGETDAEILTTLKDLLEHNVDVVTFGQYMRPTKRHLKVQEYVHPKKF 322
Query: 724 KYWETMGNKLGFLY 765
+YW+ + KLGFLY
Sbjct: 323 EYWKEVAEKLGFLY 336
>sp|P32875|LIP5_YEAST Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate
synthase)
Length = 414
Score = 341 bits (874), Expect = 1e-93
Identities = 161/254 (63%), Positives = 198/254 (77%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
N+ L ++ L L TVCEEARCPNIGECWGG + ATATIMLLGDTCTRGC+FCSVKT
Sbjct: 133 NYHKLKGDVKELGLSTVCEEARCPNIGECWGGKDKSKATATIMLLGDTCTRGCRFCSVKT 192
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
+RTP PDP EP NTA A+ +WGL YVVLT+VDRDDL+DGG+NH AETV++IK++ PN L
Sbjct: 193 NRTPSKPDPMEPENTAEAIKRWGLGYVVLTTVDRDDLVDGGANHLAETVRKIKQKAPNTL 252
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VE L+ DF+GDLK V+ + GLDVYAHN+ETV+SL VRD RA + QSL+VL+ AK
Sbjct: 253 VETLSGDFRGDLKMVDIMAQCGLDVYAHNLETVESLTPHVRDRRATYRQSLSVLERAKAT 312
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
L+TKTS+MLGLGETD+++ TLK LR I D +T GQY++PTKRH+KV EYV P+KF
Sbjct: 313 VPSLITKTSIMLGLGETDEQITQTLKDLRNIQCDVVTFGQYMRPTKRHMKVVEYVKPEKF 372
Query: 724 KYWETMGNKLGFLY 765
YW+ ++GFLY
Sbjct: 373 DYWKERALEMGFLY 386
>sp|Q9HN78|LIPA_HALSA Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 311
Score = 287 bits (735), Expect = 2e-77
Identities = 143/254 (56%), Positives = 189/254 (74%), Gaps = 1/254 (0%)
Frame = +1
Query: 7 FSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKTS 186
F+++ ++LR+ +LHTVCEEA CPN+GECW G + TAT ML+GD C+RGC FC VKT
Sbjct: 20 FTDIKETLRDNDLHTVCEEASCPNMGECWSGRDGP-GTATFMLMGDRCSRGCNFCDVKTG 78
Query: 187 RTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNILV 366
P DP+EP N A ++A+ GLDYVVLTSVDRDDL D G+ HFA T++EIK+R+P+ILV
Sbjct: 79 GMEPL-DPDEPANVAESVAEIGLDYVVLTSVDRDDLDDQGAGHFARTIREIKERDPSILV 137
Query: 367 ECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLYK 546
E L PDF+G+ V+ I+D+G DV AHN+ETV Q VRD RA +EQSL+VL++ +
Sbjct: 138 EVLIPDFQGEKSLVQKIIDAGPDVIAHNIETVARRQVPVRDRRAGYEQSLSVLEYV-TRE 196
Query: 547 SGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKFK 726
S + TKTS+MLG+GE D EV TL LRE GVD +T+GQY+QP++ HL V +YVHP KF+
Sbjct: 197 SDIYTKTSIMLGVGEYDHEVYQTLGDLREAGVDVVTLGQYLQPSRSHLDVADYVHPQKFE 256
Query: 727 YWETMG-NKLGFLY 765
W+ + ++ GFLY
Sbjct: 257 TWQRVAESEFGFLY 270
>sp|Q4JBV4|LIPA_SULAC Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 286
Score = 262 bits (670), Expect = 7e-70
Identities = 129/254 (50%), Positives = 182/254 (71%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
NF L++ + + TVCEEA CPNI ECWG G TAT M++GD CTRGC+FC VK
Sbjct: 12 NFKKLSRIVSEKGISTVCEEALCPNIMECWGSG-----TATFMIMGDICTRGCRFCYVKK 66
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
+ P D EP+ A A+ + GLDYVV+TSVDRDDL DGG++HF++ VK +K+ NP+++
Sbjct: 67 GK-PVLLDHEEPIKVAEAVREMGLDYVVITSVDRDDLADGGASHFSQVVKAVKEMNPDVI 125
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VE LTPDF G+ + VE ++ SG+DV+AHNVETV+SL VRD RA++EQSL VL +AK
Sbjct: 126 VEVLTPDFMGNKELVEKVIGSGVDVFAHNVETVRSLTPLVRDARASYEQSLRVLSYAK-- 183
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
+V K+S++LGLGE+ +EV++T+K LR +GVD L + QY++P+ + L+VK+ + +++
Sbjct: 184 --NVVKKSSILLGLGESLEEVVETMKDLRNVGVDILVLSQYMRPSIKQLEVKKRYNMEEY 241
Query: 724 KYWETMGNKLGFLY 765
K E + LGF Y
Sbjct: 242 KELEKIAYSLGFSY 255
>sp|Q9RWA4|LIPA_DEIRA Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 331
Score = 257 bits (656), Expect = 3e-68
Identities = 130/252 (51%), Positives = 170/252 (67%)
Frame = +1
Query: 7 FSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKTS 186
F+ + K ++ LHTVCEEA CPNIGECW G TAT ML+G CTR C+FC+V T
Sbjct: 44 FTEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHICTRACRFCAVDTG 98
Query: 187 RTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNILV 366
D +EP + A ++ L YVVLTSVDRDDL DGG+ HFA+TVK IK+ NP V
Sbjct: 99 NPMGKLDLDEPRSVADSVRLMDLKYVVLTSVDRDDLPDGGAYHFAKTVKAIKEVNPQTRV 158
Query: 367 ECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLYK 546
E LTPDF G+ CV+ ++DSG+D YA N+ETV+ L VRD RA+++++L+VL HAK +
Sbjct: 159 EALTPDFGGNTACVDLVLDSGVDTYAQNLETVRRLTHPVRDIRASYDRTLSVLAHAKQAR 218
Query: 547 SGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKFK 726
++TKTSLMLGLGET +E+ + + R GVD LT GQY++PT HL V+ Y+ P +F
Sbjct: 219 PDVITKTSLMLGLGETREEIREAMADCRAAGVDVLTFGQYLRPTMHHLPVERYISPAEFD 278
Query: 727 YWETMGNKLGFL 762
G +LGFL
Sbjct: 279 EIREEGMQLGFL 290
>sp|Q97U63|LIPA_SULSO Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 285
Score = 251 bits (641), Expect = 2e-66
Identities = 122/252 (48%), Positives = 176/252 (69%)
Frame = +1
Query: 4 NFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKT 183
NF + + ++ ++ TVCEEA CPNI ECWG G TAT M++G CTRGC+FC V
Sbjct: 14 NFKRVAEIVKKKSIATVCEEALCPNIMECWGSG-----TATFMIMGSICTRGCRFCYVLK 68
Query: 184 SRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNIL 363
+ P D EP A A+ + LDYVV+TSVDRDDL DGG+ HFA VK +K+ NP I+
Sbjct: 69 GKPSPLDD-EEPKRVAEAVKEMELDYVVITSVDRDDLSDGGAQHFANVVKTVKELNPGII 127
Query: 364 VECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLY 543
VE LTPDF+G++ V+ ++D+G+DV+AHNVETV+ L VRD RA++EQSLNVLK+A+
Sbjct: 128 VEVLTPDFRGNIDAVKKVIDAGVDVFAHNVETVRRLTPIVRDPRASYEQSLNVLKYAE-- 185
Query: 544 KSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKF 723
++ K+S++LGLGET E+++T++ LR +GV L + QY++P+++ L+VK+ ++F
Sbjct: 186 --NVIKKSSILLGLGETWDEIVETMRDLRSVGVSILVLSQYMRPSRKQLEVKKRYTLEEF 243
Query: 724 KYWETMGNKLGF 759
K E + +GF
Sbjct: 244 KELEEIAYSMGF 255
>sp|Q6L1L7|LIPA_PICTO Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 286
Score = 241 bits (616), Expect = 1e-63
Identities = 124/253 (49%), Positives = 170/253 (67%)
Frame = +1
Query: 7 FSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVKTS 186
++ + +L NL+TVCEEA CPNI ECW G TAT M++G C+RGC+FC+V
Sbjct: 18 YTFIKSTLSARNLYTVCEEAHCPNIAECWESG-----TATFMIMGSNCSRGCRFCAVTHG 72
Query: 187 RTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNILV 366
R P DP EP ++ LDYVV+TSVDRDDL D GS+HFA ++ +K + I +
Sbjct: 73 RMLPL-DPMEPEKVYESVKMMNLDYVVITSVDRDDLPDKGSSHFAAVIRRLK--DLKIKI 129
Query: 367 ECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKLYK 546
E L PDF G K ++ I+D DV AHN+ETV+ L + VRD RA ++QSLNVL++ K +
Sbjct: 130 EVLIPDFSGVHKFIDKIIDERPDVIAHNIETVRRLTKTVRDPRAGYDQSLNVLRYVKS-R 188
Query: 547 SGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDKFK 726
S ++TK+S+MLGLGETD EVI+TL L + GVD +T+GQY++PTK+ L+VKEY ++FK
Sbjct: 189 SNIITKSSIMLGLGETDDEVIETLHDLHDAGVDIVTIGQYLRPTKKQLEVKEYSPMERFK 248
Query: 727 YWETMGNKLGFLY 765
E +GF +
Sbjct: 249 NLEESAYSIGFSF 261
>sp|Q9Y9E3|LIPA_AERPE Probable lipoyl synthase (Lipoic acid synthase) (Lipoate synthase)
(Lipoyl-acyl-carrier protein synthase) (Sulfur insertion
protein lipA) (Lip-syn)
Length = 295
Score = 235 bits (599), Expect = 1e-61
Identities = 122/255 (47%), Positives = 167/255 (65%)
Frame = +1
Query: 1 NNFSNLTKSLRNLNLHTVCEEARCPNIGECWGGGENKTATATIMLLGDTCTRGCKFCSVK 180
+++ + + + L + TVCE A CPNI CWG G TAT M++GDTCTRGC+FC VK
Sbjct: 16 DSYVKVARLVAGLGVATVCEGALCPNIFTCWGEG-----TATFMIMGDTCTRGCRFCYVK 70
Query: 181 TSRTPPAPDPNEPLNTAIALAQWGLDYVVLTSVDRDDLIDGGSNHFAETVKEIKKRNPNI 360
P DP EP A+A+ GLDYV LTSVDRDDL DGG++HFA TV+ IK+ P+
Sbjct: 71 KG-VPEPLDPLEPYKVALAVDALGLDYVTLTSVDRDDLPDGGASHFAATVRAIKRLRPDT 129
Query: 361 LVECLTPDFKGDLKCVETIVDSGLDVYAHNVETVKSLQRFVRDHRANFEQSLNVLKHAKL 540
+VE L PDF+G + V + SGL+V AHN+ETV+ L VRD RA + QSL VL+ AK
Sbjct: 130 IVEALIPDFQGVEEHVRLVAASGLEVLAHNIETVERLTPLVRDRRAGYRQSLRVLEIAK- 188
Query: 541 YKSGLVTKTSLMLGLGETDQEVIDTLKTLREIGVDCLTVGQYIQPTKRHLKVKEYVHPDK 720
+ G+VTK+S++LGLGE EVI+ ++ LR +GVD L + QY +P+++ L V + +
Sbjct: 189 -EEGVVTKSSILLGLGEDKSEVIEAMRDLRSVGVDILVLSQYYRPSRKQLPVAKRYSLSE 247
Query: 721 FKYWETMGNKLGFLY 765
F+ G ++GF Y
Sbjct: 248 FRELAEKGLRMGFAY 262
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,480,740
Number of Sequences: 369166
Number of extensions: 1712800
Number of successful extensions: 6409
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6075
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7163732800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)