Planaria EST Database


DrC_00931

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00931
         (974 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JMD3|PCTL_MOUSE  PCTP-like protein (PCTP-L) (StAR-relat...   230   5e-60
sp|Q9Y365|PCTL_HUMAN  PCTP-like protein (PCTP-L) (StAR-relat...   226   6e-59
sp|Q8K031|STAR8_MOUSE  StAR-related lipid transfer protein 8...    61   5e-09
sp|Q92502|STAR8_HUMAN  StAR-related lipid transfer protein 8...    61   5e-09
sp|Q99NB7|CACH1_RAT  Cytoplasmic acetyl-CoA hydrolase 1 (CAC...    57   6e-08
sp|Q8R1R3|STAR7_MOUSE  StAR-related lipid transfer protein 7...    54   5e-07
sp|P53808|PPCT_MOUSE  Phosphatidylcholine transfer protein (...    54   5e-07
sp|Q9NQZ5|STAR7_HUMAN  StAR-related lipid transfer protein 7...    54   9e-07
sp|Q9DBK0|CACH1_MOUSE  Cytoplasmic acetyl-CoA hydrolase 1 (C...    52   3e-06
sp|P53809|PPCT_RAT  Phosphatidylcholine transfer protein (PC...    50   7e-06
>sp|Q9JMD3|PCTL_MOUSE PCTP-like protein (PCTP-L) (StAR-related lipid transfer protein 10)
           (StARD10) (START domain-containing protein 10)
           (Serologically defined colon cancer antigen 28 homolog)
          Length = 291

 Score =  230 bits (586), Expect = 5e-60
 Identities = 107/239 (44%), Positives = 148/239 (61%), Gaps = 1/239 (0%)
 Frame = +1

Query: 10  FMSICDNHDGWSIEVNKPDLQIWCKAAP-DSDFKIVKLKSNLKDVGAGVMYDVLHDPDYR 186
           F S C+   GW++  +K  + +W +A   D     +K +    DV A  +YDVLHD +YR
Sbjct: 33  FRSECEAEVGWNLTYSKAGVSVWVQAVEMDRTLHKIKCRMECCDVPAETLYDVLHDIEYR 92

Query: 187 KVWDRGMIKSKDICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQTPTEYIIFNHSVFH 366
           K WD  +I++ DI  +  N D+GYY+ R P P KNRD +T RSWL    +YII N+SV H
Sbjct: 93  KKWDSNVIETFDIARLTVNADVGYYSWRCPKPLKNRDVITLRSWLPMGADYIIMNYSVKH 152

Query: 367 KEMPPQKSFIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVM 546
            + PP+K  +RA+S  TGYLI+      CV+TY+AQ DP+G LP W VNK++Q++APK M
Sbjct: 153 PKYPPRKDLVRAVSIQTGYLIQSTGPKSCVITYLAQVDPKGSLPKWVVNKSSQFLAPKAM 212

Query: 547 TRLLKAALKYPAWKKKHNPDLKPWLYPEQLQLPRINFDHIITTPDFQDNTLDESEVTET 723
            ++ KA +KYP WK+KH P  KPWL+PEQ  LP +    +          +DES VTE+
Sbjct: 213 KKMYKACIKYPEWKQKHQPHFKPWLHPEQSPLPSLALSELSVQHADSLENIDESAVTES 271
>sp|Q9Y365|PCTL_HUMAN PCTP-like protein (PCTP-L) (StAR-related lipid transfer protein 10)
           (StARD10) (START domain-containing protein 10)
           (Serologically defined colon cancer antigen 28) (Antigen
           NY-CO-28)
          Length = 291

 Score =  226 bits (577), Expect = 6e-59
 Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 1/239 (0%)
 Frame = +1

Query: 10  FMSICDNHDGWSIEVNKPDLQIWCKAAP-DSDFKIVKLKSNLKDVGAGVMYDVLHDPDYR 186
           F S C+   GW++  ++  + +W +A   D     +K +    DV A  +YDVLHD +YR
Sbjct: 33  FRSECEAEVGWNLTYSRAGVSVWVQAVEMDRTLHKIKCRMECCDVPAETLYDVLHDIEYR 92

Query: 187 KVWDRGMIKSKDICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQTPTEYIIFNHSVFH 366
           K WD  +I++ DI  +  N D+GYY+ R P P KNRD +T RSWL    +YII N+SV H
Sbjct: 93  KKWDSNVIETFDIARLTVNADVGYYSWRCPKPLKNRDVITLRSWLPMGADYIIMNYSVKH 152

Query: 367 KEMPPQKSFIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVM 546
            + PP+K  +RA+S  TGYLI+      CV+TY+AQ DP+G LP W VNK++Q++APK M
Sbjct: 153 PKYPPRKDLVRAVSIQTGYLIQSTGPKSCVITYLAQVDPKGSLPKWVVNKSSQFLAPKAM 212

Query: 547 TRLLKAALKYPAWKKKHNPDLKPWLYPEQLQLPRINFDHIITTPDFQDNTLDESEVTET 723
            ++ KA LKYP WK+KH P  KPWL+PEQ  LP +    +          +DES V E+
Sbjct: 213 KKMYKACLKYPEWKQKHLPHFKPWLHPEQSPLPSLALSELSVQHADSLENIDESAVAES 271
>sp|Q8K031|STAR8_MOUSE StAR-related lipid transfer protein 8 (StARD8) (START
            domain-containing protein 8)
          Length = 851

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
 Frame = +1

Query: 37   GWSIEVNKPDLQIWCKAAPDSD-FKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIK 213
            GW+        ++ C+ APD    ++ K  + +    A V++ VL +   R +WD  +++
Sbjct: 665  GWTNVPGPQHTELACRKAPDGHPLRMWKASTEVAAPPAVVLHRVLRE---RALWDEDLLR 721

Query: 214  SKDICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQT-PTEYIIFNHSVFHKEMPPQKS 390
            ++ +  + P  ++ +Y   S  P   RDFV  R W    P    +        E P  +S
Sbjct: 722  AQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPES 781

Query: 391  FIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAW 504
             +RA+   + YL+ P       LT++ + D RG+ P W
Sbjct: 782  GVRALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDW 819
>sp|Q92502|STAR8_HUMAN StAR-related lipid transfer protein 8 (StARD8) (START
            domain-containing protein 8)
          Length = 1023

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
 Frame = +1

Query: 37   GWSIEVNKPDLQIWCKAAPDSD-FKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIK 213
            GW         ++ C+ APD    ++ K  + +    A V++ VL +   R +WD  +++
Sbjct: 837  GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRE---RALWDEDLLR 893

Query: 214  SKDICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQT-PTEYIIFNHSVFHKEMPPQKS 390
            ++ +  + P  ++ +Y   S  P   RDFV  R W    P    +        E P  +S
Sbjct: 894  AQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPES 953

Query: 391  FIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAW 504
             +RA+   + YL+ P       LT++ + D RG+ P W
Sbjct: 954  GVRALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDW 991
>sp|Q99NB7|CACH1_RAT Cytoplasmic acetyl-CoA hydrolase 1 (CACH-1) (rACH) (Acyl-CoA
           thioesterase 12)
          Length = 556

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
 Frame = +1

Query: 37  GWSIEVNKPDLQIWCKAAPDSDFKIVKLKSNLKDVG--AGVMYDVLHDPDYRKVWDRGMI 210
           GW I      ++I+     + D   VK++   K VG  A V Y +L D   R +WD   I
Sbjct: 368 GWEITTTLEKIKIY--TLEEQDAISVKVE---KQVGSPARVAYHLLSDFTKRPLWDPHYI 422

Query: 211 KSKDICMINPNNDIGYYALRSPPPFKNRDFV---TQRSWLQTPTEYIIFNHSVFHKEMPP 381
             + I  ++ ++ I Y         K +DFV   +QR  L+    YI+   SV    +PP
Sbjct: 423 SCEVIDQVSEDDQIYYITCSVVNGDKPKDFVVLVSQRKPLKDDNTYIVALMSVVLPSVPP 482

Query: 382 QKSFIRAISQLTGYLIRPLENNGCVLTYVAQ 474
              +IR+     G+LI+P++++ C + Y+ Q
Sbjct: 483 SPQYIRSQVICAGFLIQPVDSSSCTVAYLNQ 513
>sp|Q8R1R3|STAR7_MOUSE StAR-related lipid transfer protein 7 (StARD7) (START
           domain-containing protein 7)
          Length = 295

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
 Frame = +1

Query: 25  DNHDGWSIEVNKPDLQIWCKAAPDSDFKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRG 204
           D  + W + ++K   ++W +    +     ++     DV     ++V  D +YRK WD  
Sbjct: 61  DKEEPWEMVMDKKHFKLWRRPITGTHLYQYRVFGTYTDVTPRQFFNVQLDTEYRKKWDAL 120

Query: 205 MIKSKDICM-INPNNDIGYYALRSPPPFKNRDFVTQRSWL--QTPTEYIIFNHSVFHKEM 375
           +IK + I       +++ ++    P P  +RD+V  R +   Q     ++ + +V H  +
Sbjct: 121 VIKLEVIERDAVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNVMVLVSRAVEHPSV 180

Query: 376 PPQKSFIRAISQLTGYLIRP---LENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVM 546
           P    F+R  S  +  +IRP    + NG         +P+   P + V+       P  +
Sbjct: 181 PESPEFVRVRSYESQMVIRPHKSFDENGFDYLLTYSDNPQTVFPRYCVSWMVSSGMPDFL 240

Query: 547 TRLLKAALK 573
            +L  A LK
Sbjct: 241 EKLHMATLK 249
>sp|P53808|PPCT_MOUSE Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid
           transfer protein 2) (StARD2) (START domain-containing
           protein 2)
          Length = 214

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 4/183 (2%)
 Frame = +1

Query: 40  WSIEVNKPDLQIWCKAAPDSDFKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIKSK 219
           W + V    + I+      S     K+   L+     ++ DV  D DYRK WD+ + +  
Sbjct: 30  WQLLVEASGITIYRLLDQPSGLYEYKVFGVLEGCSPALLTDVYMDLDYRKQWDQYVKELY 89

Query: 220 DICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQTPTE----YIIFNHSVFHKEMPPQK 387
           +    +    + Y+ ++ P P  NRD+V  R       +    Y++   S+   + P + 
Sbjct: 90  E--KESDEQMVAYWEVKYPFPLSNRDYVYTRQRRDLDVDRRKIYVVLAQSISAPQFPEKS 147

Query: 388 SFIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVMTRLLKAA 567
             IR         I      G  +      +P G++P+W +N A +   P  +  ++KA 
Sbjct: 148 GVIRVKQYKQSLAIESDGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGVPNFLKDMVKAC 207

Query: 568 LKY 576
             Y
Sbjct: 208 QNY 210
>sp|Q9NQZ5|STAR7_HUMAN StAR-related lipid transfer protein 7 (StARD7) (START
           domain-containing protein 7) (GTT1 protein)
          Length = 295

 Score = 53.5 bits (127), Expect = 9e-07
 Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
 Frame = +1

Query: 40  WSIEVNKPDLQIWCKAAPDSDFKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIKSK 219
           W + ++K   ++W +    +     ++     DV     ++V  D +YRK WD  +IK +
Sbjct: 66  WEMVMDKKHFKLWRRPITGTHLYQYRVFGTYTDVTPRQFFNVQLDTEYRKKWDALVIKLE 125

Query: 220 DICM-INPNNDIGYYALRSPPPFKNRDFVTQRSWL--QTPTEYIIFNHSVFHKEMPPQKS 390
            I   +   +++ ++    P P  +RD+V  R +   Q     ++ + +V H  +P    
Sbjct: 126 VIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNMMVLVSRAVEHPSVPESPE 185

Query: 391 FIRAISQLTGYLIRP---LENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVMTRLLK 561
           F+R  S  +  +IRP    + NG         +P+   P + V+       P  + +L  
Sbjct: 186 FVRVRSYESQMVIRPHKSFDENGFDYLLTYSDNPQTVFPRYCVSWMVSSGMPDFLEKLHM 245

Query: 562 AALK 573
           A LK
Sbjct: 246 ATLK 249
>sp|Q9DBK0|CACH1_MOUSE Cytoplasmic acetyl-CoA hydrolase 1 (CACH-1) (mCACH-1) (Acyl-CoA
           thioesterase 12)
          Length = 556

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
 Frame = +1

Query: 37  GWSIEVNKPDLQIWCKAAPDS-DFKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIK 213
           GW I      ++I+     D+   K+ KL  +     A + Y +L D   R +WD   I 
Sbjct: 368 GWEITTTLEKIKIYTLEEQDAISVKVEKLVGS----PAHIAYHLLSDLTKRPLWDPHYIS 423

Query: 214 SKDICMINPNNDIGYYALRSPPPFKNRDFV---TQRSWLQTPTEYIIFNHSVFHKEMPPQ 384
            + I  ++ ++ I Y         K +DFV   ++R  L+    Y +   SV    +P  
Sbjct: 424 CEVIDQVSEDDQIYYITCSVVNGDKPKDFVVLVSRRKPLKDNNTYTVALRSVVLPSVPSS 483

Query: 385 KSFIRAISQLTGYLIRPLENNGCVLTYVAQ 474
             +IR+     G+LI+ +++N C +TY+ Q
Sbjct: 484 PQYIRSEVICAGFLIQAVDSNSCTVTYLNQ 513
>sp|P53809|PPCT_RAT Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid
           transfer protein 2) (StARD2) (START domain-containing
           protein 2)
          Length = 214

 Score = 50.4 bits (119), Expect = 7e-06
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 4/183 (2%)
 Frame = +1

Query: 40  WSIEVNKPDLQIWCKAAPDSDFKIVKLKSNLKDVGAGVMYDVLHDPDYRKVWDRGMIKSK 219
           W + V    + I+      +     K+   L+     ++ DV  D DYRK WD+ + +  
Sbjct: 30  WQLLVEASGITIYRLLDQSTGLYEYKVFGVLESCIPSLLADVYMDLDYRKKWDQYVKELY 89

Query: 220 DICMINPNNDIGYYALRSPPPFKNRDFVTQRSWLQTPTE----YIIFNHSVFHKEMPPQK 387
           +         + Y+ ++ P P  NRD+V  R       +    Y++   ++   + P + 
Sbjct: 90  EKSF--DGQMVAYWEVKYPFPLSNRDYVYTRQRRDLDVDGRKIYVVLAQNISVPQFPEKS 147

Query: 388 SFIRAISQLTGYLIRPLENNGCVLTYVAQCDPRGKLPAWAVNKATQYVAPKVMTRLLKAA 567
             IR         I      G  +      +P G++P+W +N A +   P  +  ++KA 
Sbjct: 148 GVIRVKQYKQSLAIESDGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGVPSFLKDMVKAC 207

Query: 568 LKY 576
             Y
Sbjct: 208 QNY 210
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,000,358
Number of Sequences: 369166
Number of extensions: 2458765
Number of successful extensions: 5535
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5520
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10191921135
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00931

  1. Dr_sW_023_I19
  2. Dr_sW_004_F15