DrC_00899
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00899 (1041 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P31409|VATB_DROME Vacuolar ATP synthase subunit B (V-ATP... 385 e-107 sp|P31401|VATB_MANSE Vacuolar ATP synthase subunit B (V-ATP... 384 e-106 sp|P31410|VATB_HELVI Vacuolar ATP synthase subunit B (V-ATP... 380 e-105 sp|P31408|VATB2_BOVIN Vacuolar ATP synthase subunit B, brai... 358 1e-98 sp|P62815|VATB2_RAT Vacuolar ATP synthase subunit B, brain ... 358 2e-98 sp|P21281|VATB2_HUMAN Vacuolar ATP synthase subunit B, brai... 358 2e-98 sp|P15313|VATB1_HUMAN Vacuolar ATP synthase subunit B, kidn... 357 3e-98 sp|P31407|VATB1_BOVIN Vacuolar ATP synthase subunit B, kidn... 353 4e-97 sp|P11593|VATB_NEUCR Vacuolar ATP synthase subunit B (V-ATP... 348 2e-95 sp|Q19626|VATB_CAEEL Probable vacuolar ATP synthase subunit... 338 2e-92
>sp|P31409|VATB_DROME Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 490 Score = 385 bits (990), Expect = e-107 Identities = 195/228 (85%), Positives = 211/228 (92%) Frame = +3 Query: 3 NSHEALKVHQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQR 182 N+ +A + H LAV+R++ISQPRLTYKTVSGVNGPLVILD VKFPK+AEIV+L LADGT R Sbjct: 2 NAQQAQREHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVR 61 Query: 183 SGQVLEVSGSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGG 362 SGQVLEVSGSKAVVQVFEGTSGIDAK+T CEFTGDILRTPVSEDMLGR+FNGSGKP D G Sbjct: 62 SGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKG 121 Query: 363 PEIMAEDFLDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEI 542 P I+AEDFLDIQGQ INP SRIYPEEMIQTGIS+IDVMNSIARGQKIPIFSA+GLPHNEI Sbjct: 122 PPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEI 181 Query: 543 AAQICRQAGLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 AAQICRQAGLV+LP KSVLDDH DNFAIVFAAMGVNMETARFF + F+ Sbjct: 182 AAQICRQAGLVKLPGKSVLDDHTDNFAIVFAAMGVNMETARFFKQDFE 229
Score = 168 bits (426), Expect = 2e-41
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 676 EDFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAE 855
+DF+E+GSMENVCLFLNLANDPTIERIITPR+ALT AE+LAYQCEKHVLVILTDM+SYAE
Sbjct: 226 QDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAE 285
Query: 856 ALREVSAAREEVPGRRGFPGYMYTDLAT 939
ALREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 286 ALREVSAAREEVPGRRGFPGYMYTDLAT 313
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 314 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 347
>sp|P31401|VATB_MANSE Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 384 bits (985), Expect = e-106 Identities = 193/225 (85%), Positives = 210/225 (93%) Frame = +3 Query: 12 EALKVHQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQ 191 +A K H LAV+R++ISQPRLTYKTVSGVNGPLVILD VKFPK++EIV+L LADGT RSGQ Sbjct: 9 QANKEHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTHRSGQ 68 Query: 192 VLEVSGSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEI 371 VLEVSGSKAVVQVFEGTSGIDAK+T CEFTGDILRTPVSEDMLGR+FNGSGKP D GP I Sbjct: 69 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 128 Query: 372 MAEDFLDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQ 551 +AEDFLDIQGQ INP SRIYPEEMIQTGIS+IDVMNSIARGQKIPIFSA+GLPHNEIAAQ Sbjct: 129 LAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQ 188 Query: 552 ICRQAGLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 ICRQAGLV++P KSVLDDH+DNFAIVFAAMGVNMETARFF + F+ Sbjct: 189 ICRQAGLVKIPGKSVLDDHEDNFAIVFAAMGVNMETARFFKQDFE 233
Score = 168 bits (426), Expect = 2e-41
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 676 EDFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAE 855
+DF+E+GSMENVCLFLNLANDPTIERIITPR+ALT AE+LAYQCEKHVLVILTDM+SYAE
Sbjct: 230 QDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAE 289
Query: 856 ALREVSAAREEVPGRRGFPGYMYTDLAT 939
ALREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 290 ALREVSAAREEVPGRRGFPGYMYTDLAT 317
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 318 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 351
>sp|P31410|VATB_HELVI Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 380 bits (977), Expect = e-105 Identities = 191/225 (84%), Positives = 210/225 (93%) Frame = +3 Query: 12 EALKVHQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQ 191 +A K H LAV+R++ISQPRL YKTVSGVNGPLVILD+VKFPK++EIV+L LADGT RSGQ Sbjct: 9 QAAKEHVLAVSRDFISQPRLIYKTVSGVNGPLVILDDVKFPKFSEIVQLRLADGTLRSGQ 68 Query: 192 VLEVSGSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEI 371 VLEVSG+KAVVQVFEGTSGIDAK+T CEFTGDILRTPVSEDMLGR+FNGSGKP D GP I Sbjct: 69 VLEVSGTKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 128 Query: 372 MAEDFLDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQ 551 +AEDFLDIQGQ INP SRIYPEEMIQTGIS+IDVMNSIARGQKIPIFSA+GLPHNEIAAQ Sbjct: 129 LAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQ 188 Query: 552 ICRQAGLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 ICRQAGLV++P KSVLDDH+DNFAIVFAAMGVNMETARFF + F+ Sbjct: 189 ICRQAGLVKIPGKSVLDDHEDNFAIVFAAMGVNMETARFFKQDFE 233
Score = 168 bits (426), Expect = 2e-41
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 676 EDFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAE 855
+DF+E+GSMENVCLFLNLANDPTIERIITPR+ALT AE+LAYQCEKHVLVILTDM+SYAE
Sbjct: 230 QDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAE 289
Query: 856 ALREVSAAREEVPGRRGFPGYMYTDLAT 939
ALREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 290 ALREVSAAREEVPGRRGFPGYMYTDLAT 317
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 318 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 351
>sp|P31408|VATB2_BOVIN Vacuolar ATP synthase subunit B, brain isoform (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 358 bits (919), Expect = 1e-98 Identities = 182/219 (83%), Positives = 199/219 (90%) Frame = +3 Query: 33 LAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQVLEVSGS 212 LAV+RNY+SQPRLTYKTVSGVNGPLVILD+VKFP+YAEIV LTL DGT+RSGQVLEVSGS Sbjct: 33 LAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGS 92 Query: 213 KAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIMAEDFLD 392 KAVVQVFEGTSGIDAK T+CEFTGDILRTPVSEDMLGR+FNGSGKP D GP ++AEDFLD Sbjct: 93 KAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLD 152 Query: 393 IQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQICRQAGL 572 I GQ INP RIYPEEMIQTGIS+ID MNSIARGQKIPIFSA+GLPHNEIAAQICRQAGL Sbjct: 153 IMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGL 212 Query: 573 VRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQR 689 V+ K V+D ++NFAIVFAAMGVNMETARFF F++ Sbjct: 213 VK-KSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFEQ 250
Score = 167 bits (423), Expect = 5e-41
Identities = 80/87 (91%), Positives = 87/87 (100%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+++GSM+NVCLFLNLANDPTIERIITPR+ALTTAE+LAYQCEKHVLVILTDM+SYAEA
Sbjct: 247 DFEQNGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 306
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 307 LREVSAAREEVPGRRGFPGYMYTDLAT 333
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 334 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 367
>sp|P62815|VATB2_RAT Vacuolar ATP synthase subunit B, brain isoform (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) sp|P62814|VATB2_MOUSE Vacuolar ATP synthase subunit B, brain isoform (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 358 bits (918), Expect = 2e-98 Identities = 182/218 (83%), Positives = 198/218 (90%) Frame = +3 Query: 33 LAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQVLEVSGS 212 LAV+RNY+SQPRLTYKTVSGVNGPLVILD+VKFP+YAEIV LTL DGT+RSGQVLEVSGS Sbjct: 33 LAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGS 92 Query: 213 KAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIMAEDFLD 392 KAVVQVFEGTSGIDAK T+CEFTGDILRTPVSEDMLGR+FNGSGKP D GP ++AEDFLD Sbjct: 93 KAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLD 152 Query: 393 IQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQICRQAGL 572 I GQ INP RIYPEEMIQTGIS+ID MNSIARGQKIPIFSA+GLPHNEIAAQICRQAGL Sbjct: 153 IMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGL 212 Query: 573 VRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 V+ K V+D ++NFAIVFAAMGVNMETARFF F+ Sbjct: 213 VK-KSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFE 249
Score = 168 bits (426), Expect = 2e-41
Identities = 81/87 (93%), Positives = 87/87 (100%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+E+GSM+NVCLFLNLANDPTIERIITPR+ALTTAE+LAYQCEKHVLVILTDM+SYAEA
Sbjct: 247 DFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 306
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 307 LREVSAAREEVPGRRGFPGYMYTDLAT 333
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 334 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 367
>sp|P21281|VATB2_HUMAN Vacuolar ATP synthase subunit B, brain isoform (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) (HO57) Length = 511 Score = 358 bits (918), Expect = 2e-98 Identities = 182/218 (83%), Positives = 198/218 (90%) Frame = +3 Query: 33 LAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQVLEVSGS 212 LAV+RNY+SQPRLTYKTVSGVNGPLVILD+VKFP+YAEIV LTL DGT+RSGQVLEVSGS Sbjct: 33 LAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGS 92 Query: 213 KAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIMAEDFLD 392 KAVVQVFEGTSGIDAK T+CEFTGDILRTPVSEDMLGR+FNGSGKP D GP ++AEDFLD Sbjct: 93 KAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLD 152 Query: 393 IQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQICRQAGL 572 I GQ INP RIYPEEMIQTGIS+ID MNSIARGQKIPIFSA+GLPHNEIAAQICRQAGL Sbjct: 153 IMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGL 212 Query: 573 VRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 V+ K V+D ++NFAIVFAAMGVNMETARFF F+ Sbjct: 213 VK-KSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFE 249
Score = 168 bits (426), Expect = 2e-41
Identities = 81/87 (93%), Positives = 87/87 (100%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+E+GSM+NVCLFLNLANDPTIERIITPR+ALTTAE+LAYQCEKHVLVILTDM+SYAEA
Sbjct: 247 DFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 306
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 307 LREVSAAREEVPGRRGFPGYMYTDLAT 333
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD
Sbjct: 334 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 367
>sp|P15313|VATB1_HUMAN Vacuolar ATP synthase subunit B, kidney isoform (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 357 bits (916), Expect = 3e-98 Identities = 181/230 (78%), Positives = 198/230 (86%) Frame = +3 Query: 15 ALKVHQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQV 194 A + H AVTRNYI+ PR+TY+TV VNGPLV+LD VKF +YAEIV TL DGTQRSGQV Sbjct: 21 AAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQV 80 Query: 195 LEVSGSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIM 374 LEV+G+KA+VQVFEGTSGIDA+ TTCEFTGDILRTPVSEDMLGR+FNGSGKP D GP +M Sbjct: 81 LEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVM 140 Query: 375 AEDFLDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQI 554 AEDFLDI GQ INP SRIYPEEMIQTGIS IDVMNSIARGQKIPIFSA+GLPHNEIAAQI Sbjct: 141 AEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQI 200 Query: 555 CRQAGLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQRTWING 704 CRQAGLV+ K+VLD H DNFAIVFAAMGVNMETARFF F++ G Sbjct: 201 CRQAGLVK-KSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMG 249
Score = 164 bits (416), Expect = 3e-40
Identities = 79/87 (90%), Positives = 86/87 (98%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+++G+M NVCLFLNLANDPTIERIITPR+ALTTAE+LAYQCEKHVLVILTDM+SYAEA
Sbjct: 241 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 300
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 301 LREVSAAREEVPGRRGFPGYMYTDLAT 327
Score = 72.0 bits (175), Expect = 3e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGR GSITQIPILTMPNDDITHPIPD
Sbjct: 328 IYERAGRVEGRGGSITQIPILTMPNDDITHPIPD 361
>sp|P31407|VATB1_BOVIN Vacuolar ATP synthase subunit B, kidney isoform (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 353 bits (906), Expect = 4e-97 Identities = 179/230 (77%), Positives = 197/230 (85%) Frame = +3 Query: 15 ALKVHQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQV 194 A + H AVTRNYI+ PR+TY+TV VNGPLV+LD VKF +YAEIV TL +GTQRSGQV Sbjct: 21 AAREHVQAVTRNYITHPRITYRTVCSVNGPLVVLDQVKFAQYAEIVNFTLPNGTQRSGQV 80 Query: 195 LEVSGSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIM 374 LEVSG+KA+VQVFEGTSGIDA+ TTCEFTGDILRTPVSEDMLGR+FNGSGKP D GP +M Sbjct: 81 LEVSGTKAIVQVFEGTSGIDAQKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVM 140 Query: 375 AEDFLDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQI 554 AEDFLDI GQ INP RIYPEEMI+TGIS IDVMNSIARGQKIPIFSA+GLPHNEIAAQI Sbjct: 141 AEDFLDINGQPINPHDRIYPEEMIETGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQI 200 Query: 555 CRQAGLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQRTWING 704 CRQAGLV+ K+VLD H DNFAIVFAAMGVNMETARFF F++ G Sbjct: 201 CRQAGLVK-KSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMG 249
Score = 164 bits (416), Expect = 3e-40
Identities = 79/87 (90%), Positives = 86/87 (98%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+++G+M NVCLFLNLANDPTIERIITPR+ALTTAE+LAYQCEKHVLVILTDM+SYAEA
Sbjct: 241 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 300
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 301 LREVSAAREEVPGRRGFPGYMYTDLAT 327
Score = 72.0 bits (175), Expect = 3e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGR GSITQIPILTMPNDDITHPIPD
Sbjct: 328 IYERAGRVEGRGGSITQIPILTMPNDDITHPIPD 361
>sp|P11593|VATB_NEUCR Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 513 Score = 348 bits (892), Expect = 2e-95 Identities = 192/337 (56%), Positives = 222/337 (65%), Gaps = 3/337 (0%) Frame = +3 Query: 39 VTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQVLEVSGSKA 218 V +Y PR+ Y TV GVNGPLVILDNVKFP+Y EIV LTL DGTQRSGQVLE G++A Sbjct: 6 VPSSYNVTPRIRYNTVGGVNGPLVILDNVKFPRYNEIVTLTLPDGTQRSGQVLEARGNRA 65 Query: 219 VVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIMAEDFLDIQ 398 VVQVFEGTSGID K T EFTG+ L+ VSEDMLGRIF+GSG+ D GP+++AE++LDI Sbjct: 66 VVQVFEGTSGIDVKKTKVEFTGESLKLGVSEDMLGRIFDGSGRAIDKGPKVLAEEYLDIN 125 Query: 399 GQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVR 578 G INP +R YP+EMI TGIS+ID MNSIARGQKIPIFSA+GLPHNEIAAQICRQAGLV+ Sbjct: 126 GSPINPYAREYPQEMISTGISAIDTMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVQ 185 Query: 579 ---LPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQRTWINGKRLLIFEFG**PXXX 749 + K V D H++NF+IVF AMGVN+ETARFF R F+ G+ L P Sbjct: 186 RQGITNKGVHDGHEENFSIVFGAMGVNLETARFFTRDFEENGSLGRTTLFLNLANDPTIE 245 Query: 750 XXXXXXXXXXXR*IFGLSV*KTRFGHTY*YDFIC*SFKRSIGCERRGSWA*RLSRIHVH* 929 + + K C + + Sbjct: 246 RIITPRLALTTAEYYAYQLEKHVLVILTDLSSYCDALREVSAAREEVPGRRGFPGYMYTD 305 Query: 930 FSYIYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040 S IYERAGRV GRNGSITQIPILTMPNDDITHPIPD Sbjct: 306 LSTIYERAGRVAGRNGSITQIPILTMPNDDITHPIPD 342
Score = 149 bits (375), Expect = 2e-35
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = +1
Query: 679 DFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAEA 858
DF+E+GS+ LFLNLANDPTIERIITPR+ALTTAEY AYQ EKHVLVILTD++SY +A
Sbjct: 222 DFEENGSLGRTTLFLNLANDPTIERIITPRLALTTAEYYAYQLEKHVLVILTDLSSYCDA 281
Query: 859 LREVSAAREEVPGRRGFPGYMYTDLAT 939
LREVSAAREEVPGRRGFPGYMYTDL+T
Sbjct: 282 LREVSAAREEVPGRRGFPGYMYTDLST 308
>sp|Q19626|VATB_CAEEL Probable vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) Length = 491 Score = 338 bits (866), Expect = 2e-92 Identities = 171/220 (77%), Positives = 194/220 (88%) Frame = +3 Query: 27 HQLAVTRNYISQPRLTYKTVSGVNGPLVILDNVKFPKYAEIVKLTLADGTQRSGQVLEVS 206 H+ A+ RNY + PRL Y+TV GVNGPLVIL++VKFP+++EIVK+TL DG++RSGQVLE+S Sbjct: 13 HKSAIIRNYNTNPRLIYQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEIS 72 Query: 207 GSKAVVQVFEGTSGIDAKHTTCEFTGDILRTPVSEDMLGRIFNGSGKPKDGGPEIMAEDF 386 +KAVVQVFEGTSGIDAK+T CEFTGDILRTPVSEDMLGRIFNGSGKP D GP ++AEDF Sbjct: 73 KNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDF 132 Query: 387 LDIQGQAINPSSRIYPEEMIQTGISSIDVMNSIARGQKIPIFSASGLPHNEIAAQICRQA 566 LDI GQ INP SRIYPEEMIQTGIS+IDVMNSIARGQKIPIFSASGLPHNEIAAQI RQ Sbjct: 133 LDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQG 192 Query: 567 GLVRLPEKSVLDDHQDNFAIVFAAMGVNMETARFFMRRFQ 686 GLV+LP++ Q NFAIVFAAMGVNMETARFF + F+ Sbjct: 193 GLVQLPDR---PHEQTNFAIVFAAMGVNMETARFFKQDFE 229
Score = 167 bits (424), Expect = 3e-41
Identities = 80/88 (90%), Positives = 88/88 (100%)
Frame = +1
Query: 676 EDFKEHGSMENVCLFLNLANDPTIERIITPRIALTTAEYLAYQCEKHVLVILTDMTSYAE 855
+DF+E+GSMENVCLFLNLANDPTIERIITPRIALT+AE+LAYQC+KHVLV+LTDM+SYAE
Sbjct: 226 QDFEENGSMENVCLFLNLANDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAE 285
Query: 856 ALREVSAAREEVPGRRGFPGYMYTDLAT 939
ALREVSAAREEVPGRRGFPGYMYTDLAT
Sbjct: 286 ALREVSAAREEVPGRRGFPGYMYTDLAT 313
Score = 72.4 bits (176), Expect = 2e-12
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3
Query: 939 IYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 1040
IYERAGRVEGR+GSITQIPILTMPNDDITHPIPD
Sbjct: 314 IYERAGRVEGRDGSITQIPILTMPNDDITHPIPD 347
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,095,699
Number of Sequences: 369166
Number of extensions: 2104612
Number of successful extensions: 6848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6704
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11244607825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
