Planaria EST Database

DrC_00897

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00897
         (720 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q64422|GNPI_MESAU  Glucosamine-6-phosphate isomerase (Glu...   322   6e-88
sp|P46926|GNPI_HUMAN  Glucosamine-6-phosphate isomerase (Glu...   320   2e-87
sp|Q5R8T8|GNPI_PONPY  Glucosamine-6-phosphate isomerase (Glu...   318   7e-87
sp|O88958|GNPI_MOUSE  Glucosamine-6-phosphate isomerase (Glu...   318   1e-86
sp|Q9XVJ2|GNPI_CAEEL  Probable glucosamine-6-phosphate isome...   279   5e-75
sp|O30564|NAGB_BORBU  Glucosamine-6-phosphate deaminase (Glu...   272   8e-73
sp|Q8REG1|NAGB_FUSNN  Glucosamine-6-phosphate deaminase (Glu...   264   2e-70
sp|Q9CMF4|NAGB_PASMU  Glucosamine-6-phosphate deaminase (Glu...   255   7e-68
sp|Q8A094|NAGB_BACTN  Glucosamine-6-phosphate deaminase (Glu...   255   1e-67
sp|Q87K60|NAGB_VIBPA  Glucosamine-6-phosphate deaminase (Glu...   254   1e-67

>sp|Q64422|GNPI_MESAU Glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate
           deaminase) (GNPDA) (GlcN6P deaminase) (Oscillin)
          Length = 289

 Score =  322 bits (825), Expect = 6e-88
 Identities = 160/234 (68%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I+ FNP  +K F             Y KLIEYYK G +SFKYV TFNMDEYV LPR HP
Sbjct: 23  RIIQFNPGPDKYFTMGLPTGSTPLGCYQKLIEYYKNGDLSFKYVKTFNMDEYVGLpreHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM+NNFFKHIDI+P N +IL+GNA +LQ EC+ FE+ I   GGIELFVGGIGPDG
Sbjct: 83  ESYHSFMWNNFFKHIDIHPENTHILDGNAADLQAECDAFEEKIRAAGGIELFVGGIGPDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           HVAFNEPGSSLVSRTRVKTLA +TI AN+RFF+ DL+KVPT ALTVGVGTVM+AREV+IL
Sbjct: 143 HVAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMDAREVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFVVMR-CNLRIKNEDCQIFK 701
           ITG+ KA AL+KAIEEGVNHMWTVSAFQQHP+T+FV      L +K +  + FK
Sbjct: 203 ITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>sp|P46926|GNPI_HUMAN Glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate
           deaminase) (GNPDA) (GlcN6P deaminase) (Oscillin)
          Length = 289

 Score =  320 bits (821), Expect = 2e-87
 Identities = 158/234 (67%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I+ FNP   K F             Y KLIEYYK G +SFKYV TFNMDEYV LPR+HP
Sbjct: 23  RIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM+NNFFKHIDI+P N +IL+GNA +LQ EC+ FE+ I   GGIELFVGGIGPDG
Sbjct: 83  ESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEPGSSLVSRTRVKTLA +TI AN+RFF+ +L+KVPT ALTVGVGTVM+AREV+IL
Sbjct: 143 HIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFVVMR-CNLRIKNEDCQIFK 701
           ITG+ KA AL+KAIEEGVNHMWTVSAFQQHP+T+FV      L +K +  + FK
Sbjct: 203 ITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>sp|Q5R8T8|GNPI_PONPY Glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate
           deaminase) (GNPDA) (GlcN6P deaminase) (Oscillin)
          Length = 289

 Score =  318 bits (816), Expect = 7e-87
 Identities = 157/234 (67%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I+ FNP   K F             Y KLIEYYK G + FKYV TFNMDEYV LPR+HP
Sbjct: 23  RIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLPFKYVKTFNMDEYVGLPRDHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM+NNFFKHIDI+P N +IL+GNA +LQ EC+ FE+ I   GGIELFVGGIGPDG
Sbjct: 83  ESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEPGSSLVSRTRVKTLA +TI AN+RFF+ +L+KVPT ALTVGVGTVM+AREV+IL
Sbjct: 143 HIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFVVMR-CNLRIKNEDCQIFK 701
           ITG+ KA AL+KAIEEGVNHMWTVSAFQQHP+T+FV      L +K +  + FK
Sbjct: 203 ITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>sp|O88958|GNPI_MOUSE Glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate
           deaminase) (GNPDA) (GlcN6P deaminase) (Oscillin)
          Length = 289

 Score =  318 bits (814), Expect = 1e-86
 Identities = 156/234 (66%), Positives = 186/234 (79%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I+ FNP  +K F             Y KLIEYYK G +SF+YV TFNMDEYV LPR+HP
Sbjct: 23  RIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDLSFQYVKTFNMDEYVGLPRDHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM++NFFKHIDI+P N +IL+GNA +LQ EC+ FE+ I   GGIELFVGGIGPDG
Sbjct: 83  ESYHSFMWDNFFKHIDIHPENTHILDGNAADLQAECDAFEEKIQAAGGIELFVGGIGPDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEPGSSLVSRTRVKTLA +TI AN+RFF+ DL+KVPT ALTVGVGTVM+A+EV+IL
Sbjct: 143 HIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMDAKEVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFVVMR-CNLRIKNEDCQIFK 701
           ITG+ KA AL+KAIEEGVNHMWTVSAFQQHP+T+FV      L +K +  + FK
Sbjct: 203 ITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>sp|Q9XVJ2|GNPI_CAEEL Probable glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate
           deaminase) (GNPDA) (GlcN6P deaminase)
          Length = 267

 Score =  279 bits (714), Expect = 5e-75
 Identities = 137/209 (65%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
 Frame = +3

Query: 78  MYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHPQSYHSFMFNNFFKHIDINPNNCYIL 257
           MY KLIE+Y AG ISF+ V TFNMDEYVDLPR+H +SYHSFMF+NFF+HIDINP N +IL
Sbjct: 47  MYKKLIEFYNAGVISFEKVKTFNMDEYVDLPRDHTESYHSFMFDNFFRHIDINPANIHIL 106

Query: 258 NGNATNLQVECEQFEKLISQHGGIELFVGGIGPDGHVAFNEPGSSLVSRTRVKTLAQETI 437
           +GN ++ + ECE++E+ I + GGI+LFVGGIGPDGH+AFNEPGSSL SRTR+KTL ++TI
Sbjct: 107 DGNTSDHEKECEEYERKIKESGGIDLFVGGIGPDGHIAFNEPGSSLASRTRIKTLNEDTI 166

Query: 438 QANSRFFENDLSKVPTNALTVGVGTVMEAREVLILITGSTKALALHKAIEEGVNHMWTVS 617
           QAN+RFF  D++KVPT ALTVGV TVM+AREV+ILITGS KALALH+AIE G++HM TVS
Sbjct: 167 QANARFFGGDITKVPTQALTVGVQTVMDAREVMILITGSHKALALHQAIECGISHMCTVS 226

Query: 618 AFQQHPKTIFVVMR-CNLRIKNEDCQIFK 701
           A Q H    F+      L +K +  + FK
Sbjct: 227 AMQMHRCATFIADEDATLELKVKTVKYFK 255

>sp|O30564|NAGB_BORBU Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate
           isomerase) (GNPDA) (GlcN6P deaminase)
          Length = 268

 Score =  272 bits (695), Expect = 8e-73
 Identities = 131/216 (60%), Positives = 160/216 (74%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I +F+P +   F            MY  LIE  K  +ISF+ V+TFNMDEY+ +  NHP
Sbjct: 23  KINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM+NNFF HIDI   N  ILNGNA+NL+ ECE++EK I   GGI LFVGGIGPDG
Sbjct: 83  ESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEPGSSL SRTR+KTL Q+TI ANSRFFE D++KVP NALTVG+GT+M+++EVLI+
Sbjct: 143 HIAFNEPGSSLTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLII 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFV 650
           + G  KA AL  AIE+GVNHMWT+SA Q H   I V
Sbjct: 203 VNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIV 238

>sp|Q8REG1|NAGB_FUSNN Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate
           isomerase) (GNPDA) (GlcN6P deaminase)
          Length = 274

 Score =  264 bits (674), Expect = 2e-70
 Identities = 129/237 (54%), Positives = 164/237 (69%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I +FNP+  K F            MY +LI++ K G ISFK V+TFNMDEYV LP+ HP
Sbjct: 22  KIKEFNPSPEKKFVLGLPTGSTPLQMYKRLIQFNKEGIISFKNVITFNMDEYVGLPKTHP 81

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           QSYH +M+NNFF HIDI+  N  ILNG A N + EC ++E+ I + GGI+LF+GG+G DG
Sbjct: 82  QSYHYYMYNNFFNHIDIDKENVNILNGMAKNYKEECRKYEEKILEVGGIDLFLGGVGVDG 141

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEPGSS  SRTR K L ++TI  NSRFF ND++KVP +ALTVGV T+M+A+EVLI+
Sbjct: 142 HIAFNEPGSSFKSRTREKQLTEDTIIVNSRFFNNDITKVPQSALTVGVSTIMDAKEVLIM 201

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFVVMRCNLRIKNEDCQIFKVSMY 713
           + G+ KA ALH  IEEG+NHMWT+SA Q H K I V          + C   KV+ Y
Sbjct: 202 VEGNNKARALHMGIEEGINHMWTISALQLHEKAIIVA-------DEDACAELKVATY 251

>sp|Q9CMF4|NAGB_PASMU Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate
           isomerase) (GNPDA) (GlcN6P deaminase)
          Length = 267

 Score =  255 bits (652), Expect = 7e-68
 Identities = 119/216 (55%), Positives = 155/216 (71%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I  F P E + F             Y  LIE YKAG++SFK+VVTFNMDEYV LP+ HP
Sbjct: 23  RINQFQPTEARPFVLGLPTGGTPLKTYEALIELYKAGEVSFKHVVTFNMDEYVGLPKEHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SYHSFM+ NFF H+DI   N  ILNGN  +   EC+++E+ I  +G I LF+GG+G DG
Sbjct: 83  ESYHSFMYKNFFDHVDIQEKNINILNGNTEDHDAECQRYEEKIKSYGKIHLFMGGVGVDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEP SSL SRTR+KTL ++T+ ANSRFF+ND++KVP  ALT+GVGT+++A EV+IL
Sbjct: 143 HIAFNEPASSLSSRTRIKTLTEDTLIANSRFFDNDVNKVPKYALTIGVGTLLDAEEVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFV 650
           +TG  KA AL  A+E  +NH+WTV+A Q H + I V
Sbjct: 203 VTGYNKAQALQAAVEGSINHLWTVTALQMHRRAIIV 238

>sp|Q8A094|NAGB_BACTN Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate
           isomerase) (GNPDA) (GlcN6P deaminase)
          Length = 270

 Score =  255 bits (651), Expect = 1e-67
 Identities = 123/211 (58%), Positives = 151/211 (71%)
 Frame = +3

Query: 18  NPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHPQSYHS 197
           NP   K F            MY  LI+  K G +SF+ VVTFNMDEYV LP+ HP+SY+S
Sbjct: 28  NPTPEKPFVLGCPTGSSPLGMYKALIDLNKKGIVSFQNVVTFNMDEYVGLPKEHPESYYS 87

Query: 198 FMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDGHVAFN 377
           FM+NNFF HIDI   N  ILNGNA +L  EC ++E+ I  +GGI+LF+GGIGPDGH+AFN
Sbjct: 88  FMWNNFFSHIDIKKENTNILNGNAPDLDAECARYEEKIKSYGGIDLFMGGIGPDGHIAFN 147

Query: 378 EPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLILITGST 557
           EPGSSL SRTR KTL  +TI ANSRFF+ND++KVP  ALTVGVGTV+ A+EV+I++ G  
Sbjct: 148 EPGSSLTSRTRQKTLTTDTIIANSRFFDNDINKVPKTALTVGVGTVLSAKEVMIIVNGHN 207

Query: 558 KALALHKAIEEGVNHMWTVSAFQQHPKTIFV 650
           KA AL+ A+E  +  MWT+SA Q H K I V
Sbjct: 208 KARALYHAVEGSITQMWTISALQMHEKGIIV 238

>sp|Q87K60|NAGB_VIBPA Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate
           isomerase) (GNPDA) (GlcN6P deaminase)
          Length = 266

 Score =  254 bits (650), Expect = 1e-67
 Identities = 119/216 (55%), Positives = 155/216 (71%)
 Frame = +3

Query: 3   QILDFNPNENKLFXXXXXXXXXXXXMYSKLIEYYKAGQISFKYVVTFNMDEYVDLPRNHP 182
           +I DF P   + F             Y  LIE Y+AG++SFK+VVTFNMDEY+ +P +HP
Sbjct: 23  RINDFKPTAERPFVLGLPTGGTPLATYKALIELYQAGEVSFKHVVTFNMDEYIGIPADHP 82

Query: 183 QSYHSFMFNNFFKHIDINPNNCYILNGNATNLQVECEQFEKLISQHGGIELFVGGIGPDG 362
           +SY SFM+NNFF HIDI   N  +LNGN  N + EC+++E  I  +G I LF+GG+G DG
Sbjct: 83  ESYRSFMYNNFFNHIDIQEENINLLNGNTDNHEAECKRYEDKIKSYGKINLFMGGVGNDG 142

Query: 363 HVAFNEPGSSLVSRTRVKTLAQETIQANSRFFENDLSKVPTNALTVGVGTVMEAREVLIL 542
           H+AFNEP SSL SRTR+KTL ++T  ANSRFF+ D+++VP  ALT+GVGT+++A EV+IL
Sbjct: 143 HIAFNEPASSLSSRTRIKTLTEDTRIANSRFFDGDINQVPKYALTIGVGTLLDAEEVMIL 202

Query: 543 ITGSTKALALHKAIEEGVNHMWTVSAFQQHPKTIFV 650
           +TG  KALAL  A+E  VNH+WTVSA Q HPK + V
Sbjct: 203 VTGHNKALALEAAVEGCVNHLWTVSALQLHPKAVIV 238

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,594,906
Number of Sequences: 369166
Number of extensions: 1494605
Number of successful extensions: 4276
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6413660220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00897

  1. Dr_sW_022_J21
  2. Dr_sW_027_N22