Planaria EST Database

DrC_00896

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00896
         (1024 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9N0F1|ODO2_PIG  Dihydrolipoyllysine-residue succinyltran...   309   7e-84
sp|Q90512|ODO2_FUGRU  Dihydrolipoyllysine-residue succinyltr...   307   3e-83
sp|P36957|ODO2_HUMAN  Dihydrolipoyllysine-residue succinyltr...   307   3e-83
sp|Q9D2G2|ODO2_MOUSE  Dihydrolipoyllysine-residue succinyltr...   306   5e-83
sp|Q01205|ODO2_RAT  Dihydrolipoyllysine-residue succinyltran...   305   1e-82
sp|O94681|ODO2_SCHPO  Probable dihydrolipoyllysine-residue s...   268   1e-71
sp|P19262|ODO2_YEAST  Dihydrolipoyllysine-residue succinyltr...   263   5e-70
sp|P07016|ODO2_ECOLI  Dihydrolipoyllysine-residue succinyltr...   262   1e-69
sp|Q92J43|ODO2_RICCN  Dihydrolipoyllysine-residue succinyltr...   259   7e-69
sp|Q9ZDY4|ODO2_RICPR  Dihydrolipoyllysine-residue succinyltr...   259   7e-69

>sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex) (E2)
           (E2K) (E2o) (PE2o)
          Length = 455

 Score =  309 bits (792), Expect = 7e-84
 Identities = 160/225 (71%), Positives = 185/225 (82%), Gaps = 2/225 (0%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E R KMNRMR RIA+RLK AQNTCAMLTTFNE DMS I ++R +++EAF KKH +KLGFM
Sbjct: 224 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQDMRARHKEAFLKKHNLKLGFM 283

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX--SVAVATPKGLVVPVLRDVQSMGFA 462
           SAF+K +A ALQ+QPVVNAV                SVAVATP+GLVVPV+R+V++M +A
Sbjct: 284 SAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYA 343

Query: 463 EIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQ 642
           +IE+ I ELGE+AR  +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+HA   
Sbjct: 344 DIERTISELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVD 403

Query: 643 RPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           RPVAV GKVEIRPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 404 RPVAVGGKVEIRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 448

>sp|Q90512|ODO2_FUGRU Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex) (E2)
           (E2K)
          Length = 409

 Score =  307 bits (787), Expect = 3e-83
 Identities = 160/225 (71%), Positives = 182/225 (80%), Gaps = 2/225 (0%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E RVKM+RMR+RIA+RLK AQNTCAMLTTFNE DMS I  +R  +++AF KKH +KLGFM
Sbjct: 178 ESRVKMSRMRLRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRTLHKDAFLKKHSIKLGFM 237

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX--SVAVATPKGLVVPVLRDVQSMGFA 462
           SAF+K AA AL DQP VNAV                SVAVATPKGLVVPV+R+V++M FA
Sbjct: 238 SAFVKAAAHALTDQPAVNAVIDGATNEIVYRDYVDISVAVATPKGLVVPVIRNVETMNFA 297

Query: 463 EIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQ 642
           +IE+ I  LGE+AR  +LA+EDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H   Q
Sbjct: 298 DIERTINALGEKARNNELAVEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFQ 357

Query: 643 RPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           RPVAVDGK EIRPMMY+ALTYDHRLVDGREAV FLRKIK+ +EDP
Sbjct: 358 RPVAVDGKAEIRPMMYVALTYDHRLVDGREAVTFLRKIKAAVEDP 402

>sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex) (E2)
           (E2K)
          Length = 453

 Score =  307 bits (787), Expect = 3e-83
 Identities = 158/225 (70%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E R KMNRMR RIA+RLK AQNTCAMLTTFNE DMS I  +R +++EAF KKH +KLGFM
Sbjct: 222 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFM 281

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX--SVAVATPKGLVVPVLRDVQSMGFA 462
           SAF+K +A ALQ+QPVVNAV                SVAVATP+GLVVPV+R+V++M FA
Sbjct: 282 SAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFA 341

Query: 463 EIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQ 642
           +IE+ I ELGE+AR  +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H    
Sbjct: 342 DIERTITELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFD 401

Query: 643 RPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           RPVA+ GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 402 RPVAIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 446

>sp|Q9D2G2|ODO2_MOUSE Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex) (E2)
           (E2K)
          Length = 454

 Score =  306 bits (785), Expect = 5e-83
 Identities = 158/225 (70%), Positives = 184/225 (81%), Gaps = 2/225 (0%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E R KMNRMR RIA+RLK AQNTCAMLTTFNE DMS I  +R ++++AF KKH +KLGFM
Sbjct: 223 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFM 282

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX--SVAVATPKGLVVPVLRDVQSMGFA 462
           SAF+K +A ALQ+QPVVNAV                SVAVATP+GLVVPV+R+V++M +A
Sbjct: 283 SAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYA 342

Query: 463 EIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQ 642
           +IE+ I ELGE+AR  +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+HA   
Sbjct: 343 DIERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIFD 402

Query: 643 RPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           RPVAV GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 403 RPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 447

>sp|Q01205|ODO2_RAT Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex) (E2)
           (E2K)
          Length = 454

 Score =  305 bits (781), Expect = 1e-82
 Identities = 157/225 (69%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E R KMNRMR RIA+RLK AQNTCAMLTTFNE DMS I  +R ++++AF KKH +KLGFM
Sbjct: 223 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFM 282

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX--SVAVATPKGLVVPVLRDVQSMGFA 462
           SAF+K +A ALQ+QPVVNAV                SVAVATP+GLVVPV+R+V++M +A
Sbjct: 283 SAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYA 342

Query: 463 EIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQ 642
           +IE+ I ELGE+AR  +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H    
Sbjct: 343 DIERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFD 402

Query: 643 RPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           RPVAV GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 403 RPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 447

>sp|O94681|ODO2_SCHPO Probable dihydrolipoyllysine-residue succinyltransferase component
           of 2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (E2) (Probable dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex)
          Length = 452

 Score =  268 bits (686), Expect = 1e-71
 Identities = 136/227 (59%), Positives = 166/227 (73%), Gaps = 4/227 (1%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E RVKMNRMR+RIAERLK +QN  A LTTFNECDMSA++ +RKKY++   K+ GVK+GFM
Sbjct: 220 EDRVKMNRMRLRIAERLKESQNRAASLTTFNECDMSAVVALRKKYKDEILKETGVKIGFM 279

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXX----SVAVATPKGLVVPVLRDVQSMG 456
           S F K    A++  P +N                    S+AVATPKGLV PV+R+ +SM 
Sbjct: 280 SFFSKACTQAMKQIPAINGSIEGEGKGDTLVYRDFCDLSIAVATPKGLVTPVIRNAESMS 339

Query: 457 FAEIEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHAT 636
             EIE  I  LG +AR G+LAIEDM  GTFTISNGG+FGSL GTPIIN PQ+A+LG+HA 
Sbjct: 340 LLEIESAIATLGSKARAGKLAIEDMASGTFTISNGGIFGSLYGTPIINLPQTAVLGLHAI 399

Query: 637 QQRPVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           ++RPV ++G+V  RPMMYLALTYDHR+VDGREAV FLR +K +IEDP
Sbjct: 400 KERPVVINGQVVPRPMMYLALTYDHRMVDGREAVTFLRLVKEYIEDP 446

>sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (E2) (Dihydrolipoamide succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex)
          Length = 463

 Score =  263 bits (673), Expect = 5e-70
 Identities = 133/223 (59%), Positives = 160/223 (71%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E RVKMNRMR+RIAERLK +QNT A LTTFNE DMSA++ +RK Y++   KK G K GFM
Sbjct: 235 ETRVKMNRMRLRIAERLKESQNTAASLTTFNEVDMSALMEMRKLYKDEIIKKTGTKFGFM 294

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXXSVAVATPKGLVVPVLRDVQSMGFAEI 468
             F K   LA +D P VN                SVAVATPKGLV PV+R+ +S+   +I
Sbjct: 295 GLFSKACTLAAKDIPAVNGAIEGDQIVYRDYTDISVAVATPKGLVTPVVRNAESLSVLDI 354

Query: 469 EKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQRP 648
           E  I  L  +AR G+L +EDM GGTFTISNGGVFGSL GTPIIN PQ+A+LG+H  ++RP
Sbjct: 355 ENEIVRLSHKARDGKLTLEDMTGGTFTISNGGVFGSLYGTPIINSPQTAVLGLHGVKERP 414

Query: 649 VAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           V V+G++  RPMMYLALTYDHRL+DGREAV FL+ +K  IEDP
Sbjct: 415 VTVNGQIVSRPMMYLALTYDHRLLDGREAVTFLKTVKELIEDP 457

>sp|P07016|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex (E2)
           (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 405

 Score =  262 bits (670), Expect = 1e-69
 Identities = 132/223 (59%), Positives = 169/223 (75%)
 Frame = +1

Query: 109 EQRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFM 288
           E+RV M R+R R+AERL  A+N+ AMLTTFNE +M  I+++RK+Y EAF+K+HG++LGFM
Sbjct: 176 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFM 235

Query: 289 SAFLKGAALALQDQPVVNAVXXXXXXXXXXXXXXSVAVATPKGLVVPVLRDVQSMGFAEI 468
           S ++K    AL+  P VNA               S+AV+TP+GLV PVLRDV ++G A+I
Sbjct: 236 SFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADI 295

Query: 469 EKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQRP 648
           EK I EL  + R G+L +ED+ GG FTI+NGGVFGSLM TPIINPPQSAILG+HA + RP
Sbjct: 296 EKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRP 355

Query: 649 VAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
           +AV+G+VEI PMMYLAL+YDHRL+DGRE+V FL  IK  +EDP
Sbjct: 356 MAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDP 398

>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex (E2)
           (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 395

 Score =  259 bits (663), Expect = 7e-69
 Identities = 130/222 (58%), Positives = 166/222 (74%)
 Frame = +1

Query: 112 QRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFMS 291
           QRV+M+R+R  IA+RLK +QNT A+LTTFNE DMS +I +R +Y+E F+KKH VKLGFMS
Sbjct: 167 QRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHAVKLGFMS 226

Query: 292 AFLKGAALALQDQPVVNAVXXXXXXXXXXXXXXSVAVATPKGLVVPVLRDVQSMGFAEIE 471
            F+K    AL+  P VNA                VAV T +GLVVPV+RD   MGFAE+E
Sbjct: 227 FFVKATIEALKLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGLVVPVVRDADKMGFAEVE 286

Query: 472 KGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQRPV 651
           K I  L ++AR G+L++ D+ GGTF+ISNGGV+GSL+ TPIINPPQS ILG+H T++R V
Sbjct: 287 KTIGILAKQAREGKLSMADLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAV 346

Query: 652 AVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
            +DGK+EIRPMMY+AL+YDHR++DG+E V FL KIK  IE+P
Sbjct: 347 VIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKQLIENP 388

>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
           2-oxoglutarate dehydrogenase complex (E2)
           (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 401

 Score =  259 bits (663), Expect = 7e-69
 Identities = 127/222 (57%), Positives = 168/222 (75%)
 Frame = +1

Query: 112 QRVKMNRMRIRIAERLKAAQNTCAMLTTFNECDMSAIINIRKKYQEAFQKKHGVKLGFMS 291
           QRV+M+R+R  IA+RLK +QNT A+LTTFNE DMS +I +R +Y+E F+KKH VKLGFMS
Sbjct: 173 QRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHTVKLGFMS 232

Query: 292 AFLKGAALALQDQPVVNAVXXXXXXXXXXXXXXSVAVATPKGLVVPVLRDVQSMGFAEIE 471
            F+K    AL+  P +NA                VAV T +GLVVPV+RD   MGFA++E
Sbjct: 233 FFVKATIEALKLIPSINAEIDGDDLLYKNYYDIGVAVGTDQGLVVPVVRDADKMGFADVE 292

Query: 472 KGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQRPV 651
           + I +L ++AR G+L++ D+ GGTF+ISNGGV+GSL+ TPIINPPQS ILG+H T++R V
Sbjct: 293 QAIGDLAKKAREGKLSMSDLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAV 352

Query: 652 AVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 777
            +DGK+EIRPMMY+AL+YDHR++DG+E V FL KIK+ IE+P
Sbjct: 353 VIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKNLIENP 394

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,513,858
Number of Sequences: 369166
Number of extensions: 2430579
Number of successful extensions: 6740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6692
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10957511455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00896

  1. Dr_sW_022_J13
  2. Dr_sW_009_G07