Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_G07
(559 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltran... 173 3e-43
sp|Q9D2G2|ODO2_MOUSE Dihydrolipoyllysine-residue succinyltr... 172 7e-43
sp|Q90512|ODO2_FUGRU Dihydrolipoyllysine-residue succinyltr... 171 1e-42
sp|Q01205|ODO2_RAT Dihydrolipoyllysine-residue succinyltran... 170 2e-42
sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltr... 170 2e-42
sp|O94681|ODO2_SCHPO Probable dihydrolipoyllysine-residue s... 153 2e-37
sp|P20708|ODO2_AZOVI Dihydrolipoyllysine-residue succinyltr... 149 3e-36
sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltr... 148 8e-36
sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltr... 148 8e-36
sp|P07016|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltr... 147 1e-35
>sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex) (E2)
(E2K) (E2o) (PE2o)
Length = 455
Score = 173 bits (438), Expect = 3e-43
Identities = 85/104 (81%), Positives = 93/104 (89%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE+ I ELGE+AR +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+HA R
Sbjct: 345 IERTISELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDR 404
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PVAV GKVEIRPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 405 PVAVGGKVEIRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 448
>sp|Q9D2G2|ODO2_MOUSE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex) (E2)
(E2K)
Length = 454
Score = 172 bits (435), Expect = 7e-43
Identities = 84/104 (80%), Positives = 93/104 (89%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE+ I ELGE+AR +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+HA R
Sbjct: 344 IERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIFDR 403
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PVAV GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 404 PVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 447
>sp|Q90512|ODO2_FUGRU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex) (E2)
(E2K)
Length = 409
Score = 171 bits (433), Expect = 1e-42
Identities = 84/104 (80%), Positives = 92/104 (88%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE+ I LGE+AR +LA+EDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H QR
Sbjct: 299 IERTINALGEKARNNELAVEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFQR 358
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PVAVDGK EIRPMMY+ALTYDHRLVDGREAV FLRKIK+ +EDP
Sbjct: 359 PVAVDGKAEIRPMMYVALTYDHRLVDGREAVTFLRKIKAAVEDP 402
>sp|Q01205|ODO2_RAT Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex) (E2)
(E2K)
Length = 454
Score = 170 bits (431), Expect = 2e-42
Identities = 83/104 (79%), Positives = 92/104 (88%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE+ I ELGE+AR +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H R
Sbjct: 344 IERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDR 403
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PVAV GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 404 PVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 447
>sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex) (E2)
(E2K)
Length = 453
Score = 170 bits (431), Expect = 2e-42
Identities = 82/104 (78%), Positives = 92/104 (88%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE+ I ELGE+AR +LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILG+H R
Sbjct: 343 IERTITELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDR 402
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PVA+ GKVE+RPMMY+ALTYDHRL+DGREAV FLRKIK+ +EDP
Sbjct: 403 PVAIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDP 446
>sp|O94681|ODO2_SCHPO Probable dihydrolipoyllysine-residue succinyltransferase component
of 2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (E2) (Probable dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex)
Length = 452
Score = 153 bits (387), Expect = 2e-37
Identities = 73/104 (70%), Positives = 87/104 (83%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE I LG +AR G+LAIEDM GTFTISNGG+FGSL GTPIIN PQ+A+LG+HA ++R
Sbjct: 343 IESAIATLGSKARAGKLAIEDMASGTFTISNGGIFGSLYGTPIINLPQTAVLGLHAIKER 402
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PV ++G+V RPMMYLALTYDHR+VDGREAV FLR +K +IEDP
Sbjct: 403 PVVINGQVVPRPMMYLALTYDHRMVDGREAVTFLRLVKEYIEDP 446
>sp|P20708|ODO2_AZOVI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex (E2)
(Dihydrolipoamide succinyltransferase component of
2-oxoglutarate dehydrogenase complex)
Length = 399
Score = 149 bits (377), Expect = 3e-36
Identities = 70/104 (67%), Positives = 88/104 (84%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE GI E G++A+ G+L IE+M GGTFTISNGGVFGSL+ TPI+NPPQ+AILG+H Q+R
Sbjct: 289 IEGGINEFGKKAKAGKLTIEEMTGGTFTISNGGVFGSLLSTPIVNPPQTAILGMHKIQER 348
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
P+AV+G+V I PMMYLAL+YDHRL+DG+EAV FL +K +EDP
Sbjct: 349 PMAVNGQVVILPMMYLALSYDHRLIDGKEAVTFLVTMKDLLEDP 392
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex (E2)
(Dihydrolipoamide succinyltransferase component of
2-oxoglutarate dehydrogenase complex)
Length = 409
Score = 148 bits (374), Expect = 8e-36
Identities = 71/104 (68%), Positives = 87/104 (83%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IEK I L E+ R G+L +ED+ GG FTI+NGGVFGSLM TPIINPPQSAILG+HA ++R
Sbjct: 299 IEKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKER 358
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
P+A++G+V IRPMMYLAL+YDHRL+DGRE+V FL IK +EDP
Sbjct: 359 PIALNGQVVIRPMMYLALSYDHRLIDGRESVGFLVTIKELLEDP 402
>sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
precursor (E2) (Dihydrolipoamide succinyltransferase
component of 2-oxoglutarate dehydrogenase complex)
Length = 463
Score = 148 bits (374), Expect = 8e-36
Identities = 70/104 (67%), Positives = 84/104 (80%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IE I L +AR G+L +EDM GGTFTISNGGVFGSL GTPIIN PQ+A+LG+H ++R
Sbjct: 354 IENEIVRLSHKARDGKLTLEDMTGGTFTISNGGVFGSLYGTPIINSPQTAVLGLHGVKER 413
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
PV V+G++ RPMMYLALTYDHRL+DGREAV FL+ +K IEDP
Sbjct: 414 PVTVNGQIVSRPMMYLALTYDHRLLDGREAVTFLKTVKELIEDP 457
>sp|P07016|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex (E2)
(Dihydrolipoamide succinyltransferase component of
2-oxoglutarate dehydrogenase complex)
Length = 405
Score = 147 bits (372), Expect = 1e-35
Identities = 72/104 (69%), Positives = 86/104 (82%)
Frame = +1
Query: 1 IEKGIFELGERARLGQLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGIHATQQR 180
IEK I EL + R G+L +ED+ GG FTI+NGGVFGSLM TPIINPPQSAILG+HA + R
Sbjct: 295 IEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDR 354
Query: 181 PVAVDGKVEIRPMMYLALTYDHRLVDGREAVLFLRKIKSFIEDP 312
P+AV+G+VEI PMMYLAL+YDHRL+DGRE+V FL IK +EDP
Sbjct: 355 PMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDP 398
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,330,135
Number of Sequences: 369166
Number of extensions: 1338475
Number of successful extensions: 3740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3980545740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)