Planaria EST Database

DrC_00882

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00882
         (974 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68Y62|CPT1A_HORSE  Carnitine O-palmitoyltransferase I, m...   224   4e-58
sp|P97742|CPT1A_MOUSE  Carnitine O-palmitoyltransferase I, m...   223   6e-58
sp|P50416|CPT1A_HUMAN  Carnitine O-palmitoyltransferase I, m...   223   8e-58
sp|Q92523|CPT1B_HUMAN  Carnitine O-palmitoyltransferase I, m...   221   3e-57
sp|Q8HY46|CPT1B_PIG  Carnitine O-palmitoyltransferase I, mit...   219   7e-57
sp|P32198|CPT1A_RAT  Carnitine O-palmitoyltransferase I, mit...   217   3e-56
sp|Q924X2|CPT1B_MOUSE  Carnitine O-palmitoyltransferase I, m...   214   3e-55
sp|Q63704|CPT1B_RAT  Carnitine O-palmitoyltransferase I, mit...   213   9e-55
sp|Q8TCG5|CPT1C_HUMAN  Carnitine O-palmitoyltransferase I, m...   186   7e-47
sp|Q8BGD5|CPT1C_MOUSE  Carnitine O-palmitoyltransferase I, m...   183   7e-46

>sp|Q68Y62|CPT1A_HORSE Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (CPT
            I) (CPTI-L) (Carnitine palmitoyltransferase 1A)
          Length = 776

 Score =  224 bits (570), Expect = 4e-58
 Identities = 108/183 (59%), Positives = 138/183 (75%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTRLFR+GRTETVRSCS+E    +L++ D       K+  F+ A+E HQ 
Sbjct: 583  GKFCLTYEASMTRLFREGRTETVRSCSSESCNFVLAMVDPTQTVKQKLRLFKIASEKHQH 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            LYR AMTG G+DRHLFC++V+ K+L + S FL++ LSEPW+LSTSQTP  Q +  DL R 
Sbjct: 643  LYRLAMTGSGIDRHLFCLYVVSKYLAVDSPFLKEVLSEPWRLSTSQTPQQQVELFDLERN 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            P+++S+GGGFGPVADDGYGVSYI+ GE+ + FHISSKFS  ET+S +F   L ++M DI 
Sbjct: 703  PEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSSPETDSHRFGKHLKQAMNDIM 762

Query: 867  DLF 875
             LF
Sbjct: 763  ALF 765

>sp|P97742|CPT1A_MOUSE Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (CPT
            I) (CPTI-L) (Carnitine palmitoyltransferase 1A)
          Length = 773

 Score =  223 bits (568), Expect = 6e-58
 Identities = 107/183 (58%), Positives = 134/183 (73%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTRLFR+GRTETVRSC+ E    +L++ D       +   F+ A E HQ 
Sbjct: 583  GKFCLTYEASMTRLFREGRTETVRSCTTESCNFVLAMMDPTTTAEQRFKLFKIACEKHQH 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            LYR AMTG G+DRHLFC++V+ K+L + S FL++ LSEPW+LSTSQTP  Q +  D  +Y
Sbjct: 643  LYRLAMTGAGIDRHLFCLYVVSKYLAVDSPFLKEVLSEPWRLSTSQTPQQQVELFDFEKY 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            PD++S GGGFGPVADDGYGVSYII GE+ + FHISSKFS  ET+S +F   L ++M DI 
Sbjct: 703  PDYVSCGGGFGPVADDGYGVSYIIVGENFIHFHISSKFSSPETDSHRFGKHLRQAMMDII 762

Query: 867  DLF 875
             LF
Sbjct: 763  TLF 765

>sp|P50416|CPT1A_HUMAN Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (CPT
            I) (CPTI-L) (Carnitine palmitoyltransferase 1A)
          Length = 773

 Score =  223 bits (567), Expect = 8e-58
 Identities = 105/183 (57%), Positives = 139/183 (75%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTRLFR+GRTETVRSC+ E  + + ++ D       ++  F+ A+E HQ 
Sbjct: 583  GKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQH 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            +YR AMTG G+DRHLFC++V+ K+L ++S FL++ LSEPW+LSTSQTP  Q +  DL   
Sbjct: 643  MYRLAMTGSGIDRHLFCLYVVSKYLAVESPFLKEVLSEPWRLSTSQTPQQQVELFDLENN 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            P+++S+GGGFGPVADDGYGVSYI+ GE+ + FHISSKFSC ET+S +F   L ++MTDI 
Sbjct: 703  PEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPETDSHRFGRHLKEAMTDII 762

Query: 867  DLF 875
             LF
Sbjct: 763  TLF 765

>sp|Q92523|CPT1B_HUMAN Carnitine O-palmitoyltransferase I, mitochondrial muscle isoform (CPT
            I) (CPTI-M) (Carnitine palmitoyltransferase 1B)
            (Carnitine palmitoyltransferase I like protein)
          Length = 772

 Score =  221 bits (562), Expect = 3e-57
 Identities = 102/187 (54%), Positives = 139/187 (74%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTR+FR+GRTETVRSC++E +  + ++ + +         F+KAA+ HQ 
Sbjct: 583  GKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQN 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            +YR AMTG G+DRHLFC++++ K+L + S FL + LSEPW+LSTSQ P  Q +  D  ++
Sbjct: 643  MYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQH 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            P+ + AGGGFGPVADDGYGVSY+IAGE+ +FFHISSKFS  ETN+++F   + K++ DI 
Sbjct: 703  PNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIA 762

Query: 867  DLFMTEK 887
            DLF   K
Sbjct: 763  DLFQVPK 769

>sp|Q8HY46|CPT1B_PIG Carnitine O-palmitoyltransferase I, mitochondrial muscle isoform (CPT
            I) (CPTI-M) (Carnitine palmitoyltransferase 1B)
          Length = 772

 Score =  219 bits (559), Expect = 7e-57
 Identities = 103/188 (54%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILS-IEDKNIPNTTKILHFRKAAEHHQ 503
            GKFC TYE+SMTR+FR+GRTETVRSC+ E +  + + +E + +    + L FRKAA+ HQ
Sbjct: 583  GKFCLTYEASMTRMFREGRTETVRSCTRESTAFVQAMVEGRRVKADLQDL-FRKAAQKHQ 641

Query: 504  KLYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTR 683
             +YR AMTG G+DRHLFC++V+ K+L + S FL + LSEPW+LSTSQ    Q +  D  +
Sbjct: 642  NMYRLAMTGAGIDRHLFCLYVVSKYLGVSSPFLAEVLSEPWRLSTSQIAQFQIRMFDPNK 701

Query: 684  YPDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDI 863
            YP+ + AGGGFGPVADDGYGVSY+IAGE+ +FFH+SSKFS  ETN+++F   + +++ D+
Sbjct: 702  YPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHVSSKFSSSETNAQRFGNHIRQALLDL 761

Query: 864  KDLFMTEK 887
             DLF   K
Sbjct: 762  ADLFQVPK 769

>sp|P32198|CPT1A_RAT Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (CPT
            I) (CPTI-L) (Carnitine palmitoyltransferase 1A)
          Length = 773

 Score =  217 bits (553), Expect = 3e-56
 Identities = 105/183 (57%), Positives = 133/183 (72%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTRLFR+GRTETVRSC+ E    + ++ D       ++  F+ A E HQ 
Sbjct: 583  GKFCLTYEASMTRLFREGRTETVRSCTMESCNFVQAMMDPKSTAEQRLKLFKIACEKHQH 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            LYR AMTG G+DRHLFC++V+ K+L + S FL++ LSEPW+LSTSQTP  Q +  D  + 
Sbjct: 643  LYRLAMTGAGIDRHLFCLYVVSKYLAVDSPFLKEVLSEPWRLSTSQTPQQQVELFDFEKN 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            PD++S GGGFGPVADDGYGVSYII GE+ + FHISSKFS  ET+S +F   L ++M DI 
Sbjct: 703  PDYVSCGGGFGPVADDGYGVSYIIVGENFIHFHISSKFSSPETDSHRFGKHLRQAMMDII 762

Query: 867  DLF 875
             LF
Sbjct: 763  TLF 765

>sp|Q924X2|CPT1B_MOUSE Carnitine O-palmitoyltransferase I, mitochondrial muscle isoform (CPT
            I) (CPTI-M) (Carnitine palmitoyltransferase 1B)
          Length = 772

 Score =  214 bits (545), Expect = 3e-55
 Identities = 101/187 (54%), Positives = 135/187 (72%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTR+FR+GRTETVRSC+ E +  + ++   +         FRKA+E HQ 
Sbjct: 583  GKFCLTYEASMTRMFREGRTETVRSCTNESAAFVQAMMKGSHKKQDLQDLFRKASEKHQN 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            +YR AMTG G+DRHLFC++++ K+L + S FL + LSEPW LSTSQ P  Q    D  +Y
Sbjct: 643  MYRLAMTGAGIDRHLFCLYIVSKYLGVSSPFLAEVLSEPWSLSTSQIPQFQICMFDPKQY 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            P+ + AGGGFGPVADDGYGVSY+IAGE+ +FFHISSK+S  ETN+++F   + +++ DI 
Sbjct: 703  PNHLGAGGGFGPVADDGYGVSYMIAGENTMFFHISSKYSSSETNAQRFGNHIRQALLDIA 762

Query: 867  DLFMTEK 887
            +LF   K
Sbjct: 763  ELFKISK 769

>sp|Q63704|CPT1B_RAT Carnitine O-palmitoyltransferase I, mitochondrial muscle isoform (CPT
            I) (CPTI-M) (Carnitine palmitoyltransferase 1B)
            (Carnitine palmitoyltransferase I-like protein)
          Length = 772

 Score =  213 bits (541), Expect = 9e-55
 Identities = 100/187 (53%), Positives = 135/187 (72%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            GKFC TYE+SMTR+FR+GRTETVRSC++E +  + ++   +         FRKA+E HQ 
Sbjct: 583  GKFCLTYEASMTRMFREGRTETVRSCTSESTAFVRAMMTGSHKKQDLQDLFRKASEKHQN 642

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            +YR AMTG G+DRHLFC++++ K+L ++S FL++ LSEPW LSTSQ P  Q    D  +Y
Sbjct: 643  MYRLAMTGAGIDRHLFCLYIVSKYLGVRSPFLDEVLSEPWSLSTSQIPQFQICMFDPKQY 702

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            P+ + AGGGFGPVAD GYGVSY+IAGE+ +FFH+SSK S  ETN+ +F   + +++ DI 
Sbjct: 703  PNHLGAGGGFGPVADHGYGVSYMIAGENTMFFHVSSKLSSSETNALRFGNHIRQALLDIA 762

Query: 867  DLFMTEK 887
            DLF   K
Sbjct: 763  DLFKISK 769

>sp|Q8TCG5|CPT1C_HUMAN Carnitine O-palmitoyltransferase I, mitochondrial brain isoform
            (Carnitine palmitoyltransferase 1C) (CPT IC)
          Length = 803

 Score =  186 bits (473), Expect = 7e-47
 Identities = 88/183 (48%), Positives = 125/183 (68%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            G+FC TYES+MTRLF +GRTETVRSC+ E    + ++EDK   +   +  FR A + HQ 
Sbjct: 580  GQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQA 639

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            L + AM+G+GVDRHLF ++++ +FL+++S FL +  SE W+LSTSQ P+ Q    D+  Y
Sbjct: 640  LLKAAMSGQGVDRHLFALYIVSRFLHLQSPFLTQVHSEQWQLSTSQIPVQQMHLFDVHNY 699

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            PD++S+GGGFGP  D GYGVSYI  G+  + FHISSK S  +T+S +    +  ++ D+ 
Sbjct: 700  PDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHIEDALLDVA 759

Query: 867  DLF 875
             LF
Sbjct: 760  SLF 762

>sp|Q8BGD5|CPT1C_MOUSE Carnitine O-palmitoyltransferase I, mitochondrial brain isoform
            (Carnitine palmitoyltransferase 1C) (CPT IC)
          Length = 798

 Score =  183 bits (464), Expect = 7e-46
 Identities = 86/183 (46%), Positives = 126/183 (68%)
 Frame = +3

Query: 327  GKFCQTYESSMTRLFRDGRTETVRSCSAEVSEAILSIEDKNIPNTTKILHFRKAAEHHQK 506
            G+FC TYES+MTRLF +GRTETVRSC+ E  + + ++++K        L FR A + HQ 
Sbjct: 579  GQFCLTYESAMTRLFLEGRTETVRSCTREACQFVRAMDNKETDQHCLAL-FRVAVDKHQA 637

Query: 507  LYREAMTGKGVDRHLFCMFVICKFLNIKSEFLEKALSEPWKLSTSQTPLGQTKQLDLTRY 686
            L + AM+G+G+DRHLF ++++ + L+++S FL +  S+ W LSTSQ P+ QT  +D+  Y
Sbjct: 638  LLKAAMSGQGIDRHLFALYIMSRLLHMQSPFLTQVQSQQWLLSTSQVPVQQTHLIDVHNY 697

Query: 687  PDFISAGGGFGPVADDGYGVSYIIAGEDRLFFHISSKFSCKETNSEKFAGSLLKSMTDIK 866
            PD++S+GGGFGP  D GYG+SYI  GE+ + FHISSK S  ET+S +    +  ++ D+ 
Sbjct: 698  PDYVSSGGGFGPAHDHGYGISYIFMGENAITFHISSKKSSTETDSHRLGQHIENALLDVA 757

Query: 867  DLF 875
             LF
Sbjct: 758  SLF 760

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,624,469
Number of Sequences: 369166
Number of extensions: 2015531
Number of successful extensions: 4950
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4909
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10191921135
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00882

  1. Dr_sW_022_D12
  2. Dr_sW_022_O10