Planaria EST Database

DrC_00850

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00850
         (585 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11348|DHPR_RAT  Dihydropteridine reductase (HDHPR) (Quin...   166   3e-41
sp|Q8BVI4|DHPR_MOUSE  Dihydropteridine reductase (HDHPR) (Qu...   164   1e-40
sp|P09417|DHPR_HUMAN  Dihydropteridine reductase (HDHPR) (Qu...   164   1e-40
sp|Q8MJ30|DHPR_PIG  Dihydropteridine reductase (HDHPR) (Quin...   163   3e-40
sp|P39333|YJGI_ECOLI  Hypothetical oxidoreductase yjgI             42   0.001
sp|P50200|HDHA_CLOSO  NADP-dependent 7-alpha-hydroxysteroid ...    36   0.062
sp|Q56632|VIBA_VIBCH  Vibriobactin-specific 2,3-dihydro-2,3-...    35   0.11 
sp|Q9BTZ2|DHRS4_HUMAN  Dehydrogenase/reductase SDR family me...    32   1.5  
sp|P99093|FABG_STAAN  3-oxoacyl-[acyl-carrier-protein] reduc...    31   2.6  
sp|P50162|TRN1_DATST  Tropinone reductase-I (TR-I) (Tropine ...    30   3.4  

>sp|P11348|DHPR_RAT Dihydropteridine reductase (HDHPR) (Quinoid dihydropteridine
           reductase)
          Length = 241

 Score =  166 bits (421), Expect = 3e-41
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   LCVAGGWAGGSANDANMVNNVYLMEKQCLWSSVISAHLAAHFLTENGFLILTGANAALTP 181
           LCVAGGWAGG+A   ++  N  LM KQ +W+S IS+HLA   L E G L L GA AAL  
Sbjct: 81  LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 140

Query: 182 TPGMLGYGMVKAAVHQLTKSLA-QDSTLPNGTWVVAILPITLDTEANRHNMPTADFTTWT 358
           TPGM+GYGM K AVHQL +SLA ++S +P+G   +A+LP+TLDT  NR +MP ADF++WT
Sbjct: 141 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWT 200

Query: 359 PLTYVANMVLEWITGDKVKPISGSLVQ 439
           PL ++     +WITG+K +P SGSL+Q
Sbjct: 201 PLEFLVETFHDWITGNK-RPNSGSLIQ 226

>sp|Q8BVI4|DHPR_MOUSE Dihydropteridine reductase (HDHPR) (Quinoid dihydropteridine
           reductase)
          Length = 241

 Score =  164 bits (416), Expect = 1e-40
 Identities = 81/147 (55%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   LCVAGGWAGGSANDANMVNNVYLMEKQCLWSSVISAHLAAHFLTENGFLILTGANAALTP 181
           LCVAGGWAGG+A   ++  N  +M KQ +W+S IS+HLA   L E G L L GA AAL  
Sbjct: 81  LCVAGGWAGGNAKSKSLFKNCDMMWKQSMWTSTISSHLATKHLKEGGLLTLAGAKAALDG 140

Query: 182 TPGMLGYGMVKAAVHQLTKSLA-QDSTLPNGTWVVAILPITLDTEANRHNMPTADFTTWT 358
           TPGM+GYGM K AVHQL +SLA ++S +P G   +A+LP+TLDT  NR +MP ADF++WT
Sbjct: 141 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPPGAAAIAVLPVTLDTPMNRKSMPEADFSSWT 200

Query: 359 PLTYVANMVLEWITGDKVKPISGSLVQ 439
           PL ++     +WITG+K +P SGSL+Q
Sbjct: 201 PLEFLVETFHDWITGNK-RPNSGSLIQ 226

>sp|P09417|DHPR_HUMAN Dihydropteridine reductase (HDHPR) (Quinoid dihydropteridine
           reductase)
          Length = 244

 Score =  164 bits (415), Expect = 1e-40
 Identities = 82/147 (55%), Positives = 104/147 (70%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   LCVAGGWAGGSANDANMVNNVYLMEKQCLWSSVISAHLAAHFLTENGFLILTGANAALTP 181
           LCVAGGWAGG+A   ++  N  LM KQ +W+S IS+HLA   L E G L L GA AAL  
Sbjct: 84  LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 143

Query: 182 TPGMLGYGMVKAAVHQLTKSLA-QDSTLPNGTWVVAILPITLDTEANRHNMPTADFTTWT 358
           TPGM+GYGM K AVHQL +SLA ++S +P G   +A+LP+TLDT  NR +MP ADF++WT
Sbjct: 144 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPPGAAAIAVLPVTLDTPMNRKSMPEADFSSWT 203

Query: 359 PLTYVANMVLEWITGDKVKPISGSLVQ 439
           PL ++     +WITG K +P SGSL+Q
Sbjct: 204 PLEFLVETFHDWITG-KNRPSSGSLIQ 229

>sp|Q8MJ30|DHPR_PIG Dihydropteridine reductase (HDHPR) (Quinoid dihydropteridine
           reductase)
          Length = 243

 Score =  163 bits (412), Expect = 3e-40
 Identities = 81/147 (55%), Positives = 104/147 (70%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   LCVAGGWAGGSANDANMVNNVYLMEKQCLWSSVISAHLAAHFLTENGFLILTGANAALTP 181
           LCVAGGWAGG+A   ++  N  LM KQ +W+S IS+HLA   L E G L L GA AAL  
Sbjct: 83  LCVAGGWAGGNAKSKSLFKNCDLMWKQSMWTSTISSHLATKHLKEGGLLTLAGAKAALDG 142

Query: 182 TPGMLGYGMVKAAVHQLTKSLA-QDSTLPNGTWVVAILPITLDTEANRHNMPTADFTTWT 358
           TPGM+GYGM K AVHQL +SLA +DS +P+G   +A+LP+TLDT  NR +MP ADF++WT
Sbjct: 143 TPGMIGYGMAKGAVHQLCQSLAGKDSGMPSGAAAIAVLPVTLDTPLNRKSMPHADFSSWT 202

Query: 359 PLTYVANMVLEWITGDKVKPISGSLVQ 439
           PL ++     +WI  +K +P SGSL+Q
Sbjct: 203 PLEFLVETFHDWII-EKNRPSSGSLIQ 228

>sp|P39333|YJGI_ECOLI Hypothetical oxidoreductase yjgI
          Length = 237

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
 Frame = +2

Query: 116 AAHFLTENGFLILTGA-NAALTPTPGMLGYGMVKAAVHQLTKSLAQDSTLPNGTWVVAIL 292
           AA  + E G +++ G+ N    P  GM  Y   K+A+  + + LA+D   P G  +  + 
Sbjct: 117 AARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG-PRGITINVVQ 175

Query: 293 PITLDTEANRHNMPTAD-------FTTWTPLTYVANMVLEWITGDKVKPISGSL 433
           P  +DT+AN  N P  D                VA MV  W+ G +   ++G++
Sbjct: 176 PGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMV-AWLAGPEASFVTGAM 228

>sp|P50200|HDHA_CLOSO NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (Bile acid
           7-dehydroxylase) (7-alpha-HSDH)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.062
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
 Frame = +2

Query: 92  SSVISAHLAAHFLTENGFLILTGANAALTPTPGMLGYGMVKAAVHQLTKSLAQDSTLPNG 271
           S +I  H+  +   + G ++   +     P    +GYG+ K+ V+ +TK +A       G
Sbjct: 125 SKLIIPHMIEN---KGGSIVNISSVGGSIPDISRIGYGVSKSGVNNITKQIAIQYA-KYG 180

Query: 272 TWVVAILPITLDTEANRHNMP---TADFTTWTPLTY------VANMVLEWITGDKVKPIS 424
               A+LP  + T+A  ++MP      F +  PL        +AN VL ++  +    I+
Sbjct: 181 IRCNAVLPGLIATDAAMNSMPDEFRKSFLSHVPLNRIGNPEDIANSVLFFVPSEDSSYIT 240

Query: 425 GSLVQ 439
           GS+++
Sbjct: 241 GSILE 245

>sp|Q56632|VIBA_VIBCH Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate
           dehydrogenase
          Length = 262

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 134 ENGFLILTGANAALTPTPGMLGYGMVKAAVHQLTKSLAQD 253
           + G +++ G+NAA TP   +  YG  KAA+H L K +  +
Sbjct: 136 QQGSMVIIGSNAANTPRMSIGAYGASKAALHMLVKCIGME 175

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 (NADPH-dependent
           carbonyl reductase/NADP-retinol dehydrogenase) (CR)
           (PHCR) (Peroxisomal short-chain alcohol dehydrogenase)
           (NADPH-dependent retinol dehydrogenase/reductase) (NDRD)
           (SCAD-SRL) (humNRDR) (PSCD)
          Length = 260

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +2

Query: 140 GFLILTGANAALTPTPGMLGYGMVKAAVHQLTKSLAQDSTLPNGTWVVAILPITLDTEAN 319
           G +++  + AA +P+PG   Y + K A+  LTK+LA +   P    V  + P  + T  +
Sbjct: 144 GSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIE-LAPRNIRVNCLAPGLIKTSFS 202

Query: 320 R 322
           R
Sbjct: 203 R 203

>sp|P99093|FABG_STAAN 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
           protein reductase)
 sp|P0A0I0|FABG_STAAW 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
           protein reductase)
 sp|P0A0H9|FABG_STAAM 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
           protein reductase)
 sp|Q6GHK4|FABG_STAAR 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
           protein reductase)
 sp|Q6G9Y2|FABG_STAAS 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
           protein reductase)
          Length = 246

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 18/145 (12%)
 Frame = +2

Query: 56  NNVYLMEKQCLWSSVISAHLAAHF-----------LTENGFLILTGANAALTPTPGMLGY 202
           +N+ +  K+  W  VI  +L   F              +G +I   +       PG   Y
Sbjct: 95  DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANY 154

Query: 203 GMVKAAVHQLTKSLAQDSTLPNGT-------WVVAILPITLDTEANRHNMPTADFTTWTP 361
              KA V  LTKS A++      T       ++V+ +   L  E     +       +  
Sbjct: 155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ 214

Query: 362 LTYVANMVLEWITGDKVKPISGSLV 436
            T +AN V  ++  DK K I+G  +
Sbjct: 215 DTDIANTV-AFLASDKAKYITGQTI 238

>sp|P50162|TRN1_DATST Tropinone reductase-I (TR-I) (Tropine dehydrogenase)
          Length = 273

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
 Frame = +2

Query: 131 TENGFLILTGANAALTPTPGMLGYGMVKAAVHQLTKSL----AQDSTLPNGTWVVAILPI 298
           ++NG +I   + A  +  P +  Y   K A++Q+TKSL    A+D+   N      IL  
Sbjct: 148 SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 207

Query: 299 TLDT--EANRHNMPTAD-FTTWTPL 364
            ++T  + N H     D F   TP+
Sbjct: 208 LVETAIKKNPHQKEEIDNFIVKTPM 232

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,741,486
Number of Sequences: 369166
Number of extensions: 1183356
Number of successful extensions: 2793
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2789
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4357244645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00850

  1. Dr_sW_010_J05
  2. Dr_sW_021_K18