DrC_00842
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00842 (1324 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P23588|IF4B_HUMAN Eukaryotic translation initiation fact... 96 2e-19 sp|Q8BGD9|IF4B_MOUSE Eukaryotic translation initiation fact... 95 4e-19 sp|O14369|SCE3_SCHPO Probable RNA-binding protein sce3 64 7e-10 sp|Q06852|SLAP1_CLOTM Cell surface glycoprotein 1 precursor... 51 9e-06 sp|P50532|SMC4_XENLA Structural maintenance of chromosome 4... 48 7e-05 sp|Q50315|Y687_MYCPN Protein MPN687 (K05_orf250) 46 2e-04 sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band ... 45 6e-04 sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [... 44 0.001 sp|Q09950|YSR2_CAEEL Hypothetical protein F59B10.2 in chrom... 44 0.001 sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subun... 44 0.001
>sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B (eIF-4B) Length = 611 Score = 96.3 bits (238), Expect = 2e-19 Identities = 115/491 (23%), Positives = 193/491 (39%), Gaps = 80/491 (16%) Frame = +2 Query: 92 RSVLPTKTSATRQIS-DLENIPQNGPFLLNFSNIPYDADENAIRQFFSNYDVINV----- 253 RS+LPT A R+ + D +P++ P+ N+PYD E +I++FF ++ V Sbjct: 70 RSILPTAPRAAREPNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLpre 129 Query: 254 -TKNEIKRGTGIIEFKDLNNLSGALSLAEKIFLNRPIRLSIS------LKDDLSRIKSGG 412 + E +G G EF+DL++L ALSL E+ NR IR+ ++ +DD S + Sbjct: 130 PSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDKDRDDRSFGRDRN 189 Query: 413 XXXXXXXXXXXXXPPTISEDSDNWRTKKPQPVSQPSTDNYTPRND--------RSNWRDK 568 P T D++ P+ D Y R D R +RD Sbjct: 190 RDSDKTDTDWRARPAT-----DSFDDYPPRRGDDSFGDKYRDRYDSDRYRDGYRDGYRDG 244 Query: 569 P--------SLIRNDDKALSD---------------------NSENWRRG--------TN 637 P R DD+ D +++R G Sbjct: 245 PRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYRGGGDRYEDRYDR 304 Query: 638 RDTKSGS----FNRRNQTMQDNSKP----MPIVERSDPKD------LVKETKKVSIFGDA 775 RD +S S ++R + D P + + RS P++ + T+ SIFG A Sbjct: 305 RDDRSWSSRDDYSRDDYRRDDRGPPQRPKLNLKPRSTPEEDDSSASTSQSTRAASIFGGA 364 Query: 776 KPVDTQSKDLEIEEKIAQQKKQLGDD------SKKSDDFTPSF--SRSQKRQTNTTQNSA 931 KPVDT +++ E+EE++ +++++L ++ + PS+ +Q+R+ + T + + Sbjct: 365 KPVDTAAREREVEERLQKEQEKLQRQWNEPKLERRpreRHPSWRSEETQERERSRTGSES 424 Query: 932 TFDSKPEKSENRTKAISSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVN 1111 + S + S T + E P+ S P+P +P+K P P P N Sbjct: 425 SQTGTSTTSSRNARRRESEKSLENETLNKEEDCHSPT-SKPPKPDQPLKVMPAPPP-KEN 482 Query: 1112 VWNERMKAKGLSPQAQVVNRNNSASKPGLDKSSLPQSLPTERIEPSPAEHHQATCQPVGG 1291 W +R Q+ + + S G + P + E P + V G Sbjct: 483 AWVKRSSNPPARSQSSDTEQQSPTSGGG-------KVAPAQPSEEGPGRKDE---NKVDG 532 Query: 1292 GNNPINQSSPS 1324 N P Q+ S Sbjct: 533 MNAPKGQTGNS 543
>sp|Q8BGD9|IF4B_MOUSE Eukaryotic translation initiation factor 4B (eIF-4B) Length = 611 Score = 95.1 bits (235), Expect = 4e-19 Identities = 108/425 (25%), Positives = 174/425 (40%), Gaps = 80/425 (18%) Frame = +2 Query: 92 RSVLPTKTSATRQIS-DLENIPQNGPFLLNFSNIPYDADENAIRQFFSNYDVINV----- 253 RS+LPT A R+ + D +P++ P+ N+PYD E++I+ FF ++ V Sbjct: 70 RSILPTAPRAAREPNIDRSRLPKSPPYTAFLGNLPYDVTEDSIKDFFRGLNISAVRLpre 129 Query: 254 -TKNEIKRGTGIIEFKDLNNLSGALSLAEKIFLNRPIRLSIS------LKDDLSRIKSGG 412 + + +G G EF+DL++L ALSL E+ NR IR+ ++ +DD S + Sbjct: 130 PSNPDRLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDKDRDDRSFGRDRN 189 Query: 413 XXXXXXXXXXXXXPPTISEDSDNWRTKKPQPVSQPSTDNYTPRND--------RSNWRDK 568 P T D++ P+ D Y R D R +RD Sbjct: 190 RDSDKTDTDWRARPTT-----DSFDDYPPRRGDDSFGDKYRDRYDSDRYRDGYRDGYRDG 244 Query: 569 P--------SLIRNDDKALSD---------------------NSENWRRG--------TN 637 P R DD+ D +++R G Sbjct: 245 PRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYRGGGDRYEDRYDR 304 Query: 638 RDTKSGS----FNRRNQTMQDNSKP----MPIVERSDPKD------LVKETKKVSIFGDA 775 RD +S S ++R + D P + + RS PK+ + ++ SIFG A Sbjct: 305 RDDRSWSSRDDYSRDDYRRDDRGPPQRPRLNLKPRSAPKEDDASASTSQSSRAASIFGGA 364 Query: 776 KPVDTQSKDLEIEEKI--AQQKKQLGDDSKKSD----DFTPSF--SRSQKRQTNTTQNSA 931 KPVDT +++ E+EE++ Q+K Q D K D + PS+ +Q+R+ + T + + Sbjct: 365 KPVDTAAREREVEERLQKEQEKLQRQLDEPKLDRRpreRHPSWRSEETQERERSRTGSES 424 Query: 932 TFDSKPEKSENRTKAISSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVN 1111 + S T+ S T + E P+ S P+P +P+K P P P N Sbjct: 425 SQTGASATSGRNTRRRESEKSLENETLNKEEDCHSPT-SKPPKPDQPLKVMPAPPP-KEN 482 Query: 1112 VWNER 1126 W +R Sbjct: 483 AWVKR 487
>sp|O14369|SCE3_SCHPO Probable RNA-binding protein sce3 Length = 388 Score = 64.3 bits (155), Expect = 7e-10 Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 6/275 (2%) Frame = +2 Query: 149 IPQNGPFLLNFSNIPYDADENAIRQFF----SNYDVINVTKNEIKRGTGIIEFKDLNNLS 316 IP PF + N+ +D EN + FF ++ ++ E RG G +EF+ + LS Sbjct: 88 IPSEPPFTAHVGNLSFDLTENDLGDFFGEGVTSIRLVIDPLTERSRGFGYVEFETADTLS 147 Query: 317 GALSLAEKIFLNRPIRLSIS-LKDDLSRIKSGGXXXXXXXXXXXXXPPTISEDSDNWRTK 493 AL+L+ + + RP+R++++ + +R + + +W + Sbjct: 148 AALALSGEDLMGRPVRITVAEPRRSFAREE---------------------RSTGDWVRR 186 Query: 494 KPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKALSDNSENW-RRGTNRDTKSGSFNRR 670 P P ++P+ + R S P+ R+ + + W RRG +S R Sbjct: 187 GPLPPAEPAESPFGKRRTNSGRFRDPA--RDPSDRVREEpreWVRRGPLPpreSSERPRL 244 Query: 671 NQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQLGD 850 N + +S S + K+ FG AKPVD S +EEK+A++ + Sbjct: 245 NLKPRSSSNVNTEATPSATTTTSSKPKR-DPFGGAKPVDNTSVLQRVEEKLAKRTQSF-- 301 Query: 851 DSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEK 955 ++ D+ S S+K + + + D+ EK Sbjct: 302 --RREDNANRERSTSRKPSADKAEKTDKTDAIAEK 334
>sp|Q06852|SLAP1_CLOTM Cell surface glycoprotein 1 precursor (Outer layer protein B) (S-layer protein 1) Length = 1664 Score = 50.8 bits (120), Expect = 9e-06 Identities = 66/295 (22%), Positives = 111/295 (37%), Gaps = 5/295 (1%) Frame = +2 Query: 455 PTISEDSDNWRT-KKPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKALSDN---SENW 622 PT S++ T ++P P PS D TP +D D+P+ +D+ SD SE Sbjct: 1039 PTPSDEPTPSETPEEPIPTDTPS-DEPTP-SDEPTPSDEPT--PSDEPTPSDEPTPSETP 1094 Query: 623 RRGTNRDTKSGSFNRRNQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKD 802 DT S T D P SD E + P DT S + Sbjct: 1095 EEPIPTDTPSDE-----PTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDE 1149 Query: 803 -LEIEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAI 979 +E + D+ SD+ TPS + + T+T + T +P S+ T + Sbjct: 1150 PTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSD 1209 Query: 980 SSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVNVWNERMKAKGLSPQAQ 1159 T + + E+ + P+D+ EP+ +P P P P + + + Sbjct: 1210 EPTPSDEPTPSETPEEPI-PTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEE 1268 Query: 1160 VVNRNNSASKPGLDKSSLPQSLPTERIEPSPAEHHQATCQPVGGGNNPINQSSPS 1324 + + + +P P PT EP+P++ + +P P ++ +PS Sbjct: 1269 PIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEP-----TPSDEPTPS 1318
Score = 46.2 bits (108), Expect = 2e-04
Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 1/183 (0%)
Frame = +2
Query: 779 PVDTQSKD-LEIEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEK 955
P DT S + +E + D+ SD+ TPS + + T+T + T +P
Sbjct: 774 PTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTP 833
Query: 956 SENRTKAISSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVNVWNERMKA 1135
S+ T + T + + E+ + P+D+ EP+ +P P P P + +
Sbjct: 834 SDEPTPSDEPTPSDEPTPSETPEEPI-PTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEP 892
Query: 1136 KGLSPQAQVVNRNNSASKPGLDKSSLPQSLPTERIEPSPAEHHQATCQPVGGGNNPINQS 1315
+ + + + +P P PT EP+P++ + P PI
Sbjct: 893 TPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETP----EEPIPTD 948
Query: 1316 SPS 1324
+PS
Sbjct: 949 TPS 951
Score = 45.4 bits (106), Expect = 4e-04
Identities = 59/298 (19%), Positives = 107/298 (35%), Gaps = 8/298 (2%)
Frame = +2
Query: 455 PTISEDSDNWRTKKPQPVSQPS-TDNYTPRNDRSNWRDK----PSLIRNDDKALSDNSEN 619
PT + + + +P P +P+ +D TP ++ + P+ +D+ SD
Sbjct: 903 PTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTP 962
Query: 620 WRRGTNRDTKSGSFNRR---NQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDT 790
T D + S T D P E P D + S + P D
Sbjct: 963 SDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPS--DEPTPSDE 1020
Query: 791 QSKDLEIEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRT 970
+ +E + D+ SD+ TPS + + T+T + T +P S+ T
Sbjct: 1021 PTPS---DEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPT 1077
Query: 971 KAISSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVNVWNERMKAKGLSP 1150
+ T + + E+ + P+D+ EP+ +P P P P + +
Sbjct: 1078 PSDEPTPSDEPTPSETPEEPI-PTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSET 1136
Query: 1151 QAQVVNRNNSASKPGLDKSSLPQSLPTERIEPSPAEHHQATCQPVGGGNNPINQSSPS 1324
+ + + + +P P PT EP+P++ + P PI +PS
Sbjct: 1137 PEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETP----EEPIPTDTPS 1190
Score = 43.5 bits (101), Expect = 0.001
Identities = 70/295 (23%), Positives = 105/295 (35%), Gaps = 5/295 (1%)
Frame = +2
Query: 455 PTISEDSDNWRT-KKPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKALSDN---SENW 622
PT S++ T ++P P PS D TP +D D+P+ +D+ SD SE
Sbjct: 800 PTPSDEPTPSETPEEPIPTDTPS-DEPTP-SDEPTPSDEPT--PSDEPTPSDEPTPSETP 855
Query: 623 RRGTNRDTKSGSFNRRNQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKD 802
DT S T D P SD E + P DT S +
Sbjct: 856 EEPIPTDTPSDE-----PTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDE 910
Query: 803 -LEIEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAI 979
+E + D+ SD+ TPS + + T+T + T +P S+ T +
Sbjct: 911 PTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSD 970
Query: 980 SSTTKSNVSTFQRNEQLVKPSDSVKPEPSEPVKPDPQPAPIPVNVWNERMKAKGLSPQAQ 1159
T PSD +P PS+ +P P P P E + S +
Sbjct: 971 EPT----------------PSD--EPTPSD--EPTPSDEPTPSETPEEPIPTDTPSDEPT 1010
Query: 1160 VVNRNNSASKPGLDKSSLPQSLPTERIEPSPAEHHQATCQPVGGGNNPINQSSPS 1324
+ + +P P PT EP+P++ + P PI +PS
Sbjct: 1011 PSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETP----EEPIPTDTPS 1061
Score = 40.8 bits (94), Expect = 0.009
Identities = 56/262 (21%), Positives = 96/262 (36%), Gaps = 7/262 (2%)
Frame = +2
Query: 494 KPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKAL-SDNSENWRRGTNRDTKSGSFNRR 670
+P P +P+ + +D D+P+ ++ + +D + ++ T S
Sbjct: 1192 EPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPS 1251
Query: 671 NQ-TMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQLG 847
++ T D P E P D + S + P D + +E +
Sbjct: 1252 DEPTPSDEPTPSETPEEPIPTDTPSDEPTPS--DEPTPSDEPTPS---DEPTPSDEPTPS 1306
Query: 848 DDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKSNVSTFQRNEQ 1027
D+ SD+ TPS + + T+T + T +P S+ T + T +
Sbjct: 1307 DEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSD---- 1362
Query: 1028 LVKPSDSVKPEPSE-PVKPDP--QPAPIPVNVWNERMKAKGLSPQAQVVNRNNSASKPGL 1198
+P+ S +P PSE P +P P P P P G S + P
Sbjct: 1363 --EPTPSDEPTPSETPEEPTPTTTPTPTPSTTPTSGSGGSGGSGGGGGGGGGTVPTSPTP 1420
Query: 1199 DKSSLPQS--LPTERIEPSPAE 1258
+S P S PTE EP+P++
Sbjct: 1421 TPTSKPTSTPAPTEIEEPTPSD 1442
>sp|P50532|SMC4_XENLA Structural maintenance of chromosome 4 (Chromosome-associated protein C) (Chromosome assembly protein XCAP-C) Length = 1290 Score = 47.8 bits (112), Expect = 7e-05 Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 4/153 (2%) Frame = +2 Query: 584 NDDKALSDNSENWRRGTNRDTK--SGSFNRRNQTMQDNSKPMPIVERSDPK--DLVKETK 751 +D + S + E + DTK S N +TM++ +K + VE+ K ++E + Sbjct: 322 HDLQKRSRDKEAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEENR 381 Query: 752 KVSIFGDAKPVDTQSKDLEIEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSA 931 + D + VDT+ K + K+ + +KQL D +K D+ + SQK T Sbjct: 382 EKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNVPANSQKIIAEETNKKD 441 Query: 932 TFDSKPEKSENRTKAISSTTKSNVSTFQRNEQL 1030 + + EK E + K + + K Q +++ Sbjct: 442 LLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEV 474
>sp|Q50315|Y687_MYCPN Protein MPN687 (K05_orf250) Length = 250 Score = 46.2 bits (108), Expect = 2e-04 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 23/202 (11%) Frame = +2 Query: 707 IVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQ------------LGD 850 + + D + V+E KKV +PV DL + K Q + G Sbjct: 13 LAQDEDDAETVQEVKKVEQQLKLEPVVQPQHDLTNQTKANQSSQDRKFFSKDMPQFDFGP 72 Query: 851 DSKKSDDFTPSFSR--SQKRQTNTTQNSATFDSKPEKSENR--TKAISSTTKSNVSTFQR 1018 K D+F SF++ Q+ QT+T + S+P N+ T+ + T + +++ FQ+ Sbjct: 73 LLKFGDEFVKSFNQFPKQEPQTSTQPVNVQPQSEPTNFNNQVPTQPVHQTAEVHLNEFQQ 132 Query: 1019 ------NEQLVKPSDSVKPEPSEP-VKPDPQPAPIPVNVWNERMKAKGLSPQAQVVNRNN 1177 N+Q V S+ ++ E ++P V+P PQP P P E+ + K + + + Sbjct: 133 PTTTNFNQQPVATSN-IQVEATQPIVEPVPQPEPQPA---VEQPQVKQTTRPSNKLQEEE 188 Query: 1178 SASKPGLDKSSLPQSLPTERIE 1243 + P K+ +P +P ER E Sbjct: 189 NLPPP---KAKVPGIIPLERQE 207
>sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band polypeptide I) Length = 651 Score = 44.7 bits (104), Expect = 6e-04 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 22/192 (11%) Frame = +2 Query: 581 RNDDKALSDNSENWRRG-TNRDTKSGSFNRRNQTMQD---NSKPMPIVERSDPKDLVKET 748 ++DD+++ N + W R + ++K+ S T +D N+K E D KD K++ Sbjct: 253 QSDDESI--NFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDS 310 Query: 749 KKV-----------SIFGDAKPVDTQSKDLEIEEK-IAQQKKQLGDDSKKSD-----DFT 877 KKV + D + D +S D + E K + KK+L D KK D + T Sbjct: 311 KKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPEST 370 Query: 878 PSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISST-TKSNVSTFQRNEQLVKPSDSVK 1054 + S K N ++N +K ++ K ST ++S + + + + K K Sbjct: 371 DTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSK 430 Query: 1055 PEPSEPVKPDPQ 1090 + + VK D + Sbjct: 431 TDNKKSVKNDEE 442
Score = 37.0 bits (84), Expect = 0.13
Identities = 54/278 (19%), Positives = 109/278 (39%), Gaps = 3/278 (1%)
Frame = +2
Query: 491 KKPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKALSDN---SENWRRGTNRDTKSGSF 661
K + S D+ R D +DK L ++D K + S + G +D ++ S
Sbjct: 328 KDTESTDAESGDSKDERKDTK--KDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSR 385
Query: 662 NRRNQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQ 841
N + + D+ K K+ KK++ D++ + +SK+ + +EK + KK
Sbjct: 386 NLKKASKNDDKK--------------KDAKKITFSTDSES-ELESKESQKDEK--KDKKD 428
Query: 842 LGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKSNVSTFQRN 1021
D+KKS + S DS+P+ + K K + +
Sbjct: 429 SKTDNKKS--------------VKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKK 474
Query: 1022 EQLVKPSDSVKPEPSEPVKPDPQPAPIPVNVWNERMKAKGLSPQAQVVNRNNSASKPGLD 1201
+ K ++S + E +K D + + ++ K + A+ ++ ++ D
Sbjct: 475 KDAKKNAESTEMESDLELKKDKKHSK------EKKGSKKDIKKDAR---KDTESTDAEFD 525
Query: 1202 KSSLPQSLPTERIEPSPAEHHQATCQPVGGGNNPINQS 1315
+SS + +I+ S E ++ +P G I++S
Sbjct: 526 ESSKTGFKTSTKIKGSDTESEESLYKP--GAKKKIDES 561
Score = 35.8 bits (81), Expect = 0.28
Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 34/231 (14%)
Frame = +2
Query: 539 RNDRSNWRDKPSLIRNDDKALSDNSE---NWRRGTNRDTKSGSFNRRNQTMQDNSKPMPI 709
++ + + D ++ND+++ +SE + ++G + K ++++ +D K
Sbjct: 424 KDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAES 483
Query: 710 VERSDPKDLVKETK--------KVSIFGDAKPVDTQSKDLEIEEK----IAQQKKQLGDD 853
E +L K+ K K I DA+ DT+S D E +E K G D
Sbjct: 484 TEMESDLELKKDKKHSKEKKGSKKDIKKDARK-DTESTDAEFDESSKTGFKTSTKIKGSD 542
Query: 854 SKKSDD-FTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKSNVSTFQRNEQL 1030
++ + + P + T+ NS + +S+ + S T N + +
Sbjct: 543 TESEESLYKPGAKKKIDESDGTSANSKM---EGLESKRGFRMSSKKTTFNEKGEKASTGR 599
Query: 1031 VKPSDSVKPEPS------------------EPVKPDPQPAPIPVNVWNERM 1129
V PS P P+ P P P+ AP+P W ++
Sbjct: 600 VPPSREKPPLPACEPSLPSPKVRRLCWCKMPPPPPKPRYAPLPEAPWIHKL 650
>sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 43.9 bits (102), Expect = 0.001 Identities = 41/195 (21%), Positives = 68/195 (34%) Frame = +2 Query: 464 SEDSDNWRTKKPQPVSQPSTDNYTPRNDRSNWRDKPSLIRNDDKALSDNSENWRRGTNRD 643 S DS N S S + + + SN D S +D SD+S++ + D Sbjct: 698 SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSD 757 Query: 644 TKSGSFNRRNQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKI 823 + S + + D+S SD D + D+ S + Sbjct: 758 SSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSS-------DSSDSSNSSDSSNSSDSS 810 Query: 824 AQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKSNV 1003 D S SD S S ++++ +S + DS S NR+ + +S+ S+ Sbjct: 811 DSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDS 870 Query: 1004 STFQRNEQLVKPSDS 1048 S + SDS Sbjct: 871 SDSSNSSDSSDSSDS 885
Score = 38.1 bits (87), Expect = 0.057
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 2/197 (1%)
Frame = +2
Query: 464 SEDSDNWRTKKPQPVSQPSTD--NYTPRNDRSNWRDKPSLIRNDDKALSDNSENWRRGTN 637
S DSD+ + S+D N + +D S+ D + D SD+S++ ++
Sbjct: 577 SSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSK-SDSSKSESDSSD 635
Query: 638 RDTKSGSFNRRNQTMQDNSKPMPIVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEE 817
D+KS S + + DNS S+ D + S D+ S +
Sbjct: 636 SDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSD----SSDSSDSSDSSSSSDSSSSSDSSN 691
Query: 818 KIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKS 997
+S +S D + S S S ++ + NS + DS S + + + S+ S
Sbjct: 692 SSDSSDSSDSSNSSESSDSSDS-SDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSS 750
Query: 998 NVSTFQRNEQLVKPSDS 1048
N S + SDS
Sbjct: 751 NSSDSSDSSDSSNSSDS 767
Score = 34.3 bits (77), Expect = 0.83
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 5/168 (2%)
Frame = +2
Query: 518 STDNYTPRNDRSNWRDKPSLIRN--DDKALSDNSENWRRGTNRDTKSGSFNRRNQTMQDN 691
S +N + R D S D+ N D K D+ + TN +G+ N N DN
Sbjct: 481 SDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGND---DN 537
Query: 692 SKPMPIVERSDPKDL-VKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQLGDDSKKSD 868
K +SD D ++ S D+ D+ + + + DS SD
Sbjct: 538 DKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSD 597
Query: 869 --DFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISSTTKSNVS 1006
+ + S S ++ + +S+ DSK + S++ + + S +KS+ S
Sbjct: 598 SSNSSDSSDSSDSSDSSDSSDSS--DSKSDSSKSESDSSDSDSKSDSS 643
>sp|Q09950|YSR2_CAEEL Hypothetical protein F59B10.2 in chromosome II Length = 482 Score = 43.9 bits (102), Expect = 0.001 Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Frame = +2 Query: 695 KPMP------IVERSDPKDLVKETKKVSIFGDAKPVDTQSKDLEIEEKIAQQKKQLGDDS 856 KP P +VE+ K VKE +K + P T+S + + + +S Sbjct: 176 KPAPARTAPIVVEKKIEKPAVKE-QKARKKKEKTPTPTESSFESSSDSSSTSESSTSSES 234 Query: 857 KKSDDFTPSFSRSQKRQTNT-TQNSATFDSKPEKSENRTKAISSTTKSNVSTFQRNEQLV 1033 S + S S+S+ + +++ T S SK S+ ++ SS++ S +S ++L Sbjct: 235 SSSASESESESKSESQVSSSKTSTSKASSSKAYGSDFESEKSSSSSASTISKVTP-KKLD 293 Query: 1034 KPSDSVKPEPS----EPVKPDPQPAPIPVNVWNERMKAKGLSPQAQVVNRNNSASKPGLD 1201 KP + KP+ + ++ + +P PIP + ++ ++ + + V N + L Sbjct: 294 KPQKTKKPDKKRAKPDDIRQNKKPEPIPYEDFIPKLSSRSSNSEKSTVRETNRTLEESL- 352 Query: 1202 KSSLPQSLPTERIE 1243 K +L + +E++E Sbjct: 353 KKTLKINKSSEKME 366
>sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 (eIF4F p150) (eIF-4F p150) (mRNA cap-binding protein complex subunit p150) Length = 952 Score = 43.9 bits (102), Expect = 0.001 Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 13/204 (6%) Frame = +2 Query: 488 TKKPQPVSQ-----PSTDNYTPRNDRSNWRDKPSLIRNDDKALSDNSENWRRGTNRD--- 643 T PQP S+ ST TP P+ ND KA S+ + + T R+ Sbjct: 161 TVSPQPESKLKETSDSTSTSTPT---------PTPSTNDSKASSEENISEAEKTRRNFIE 211 Query: 644 ----TKSGSFNRRNQTMQDNSKPMPIVERSDPKDLV-KETKKVSIFGDAKPVDTQSKDLE 808 K+ +R + ++ +S I ++ P+++ K + K + KP + +S + E Sbjct: 212 QVKLRKAALEKKRKEQLEGSSGNNNIPMKTTPENVEEKGSDKPEVTEKTKPAEEKSAEPE 271 Query: 809 IEEKIAQQKKQLGDDSKKSDDFTPSFSRSQKRQTNTTQNSATFDSKPEKSENRTKAISST 988 ++++ ++ + G+ + ++ TP +R Q + K E EN+ + Sbjct: 272 VKQETPAEEGEQGEKGQIKEESTPKVLTFAERLKLKKQQKER-EEKTEGKENKEVPVQEE 330 Query: 989 TKSNVSTFQRNEQLVKPSDSVKPE 1060 TKS + + V PS+ VK E Sbjct: 331 TKSAIESAP-----VPPSEQVKEE 349
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,945,551
Number of Sequences: 369166
Number of extensions: 3001676
Number of successful extensions: 15096
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13917
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15418231940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
